AT1G10090

ion transport

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0003874
Physical Location & Seq
Reverse (-)
3290311 .. 3296198
5888 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G10090.1

Sequence Viewer

Length: 2289 bp
ATGGATGTCTCAGCACTTTTAACGTCTGCTGGGATTAATATAGCGATATGCGTAGTGCTTGTATCGCTTTATTCCATTCTACGAAAGCAGCCAGCCAATTATTGTGTTTACTTTGGTCGATTGCTTTCTGACGGAAGAGTTAAACGTCATGATCCTCGTTGGTATGAGAGGTTCGCGCCCTCTCCTAGTTGGCTCGTGAAAGCTTGGGAAACCACTGAGGAAGAGATGTTGGCTGCTGCTGGTCTGGATGCTGTGGTTTTCATCAGGATGGTCATTTGCAGCATTCGTATTTTCTCAATCGTCGCAGTCGTTTGCCTTGCCTTTGTGTTACCTGTTAACTATTATGGACAAAAGATGGAGCACAAGGAAGTCCATTTGGAGTCATTGGGAGTATTCACAATTGAGAACCTTAATCCACGCTCACGATGGCTCTGGGTTCATTGTCTCTCATTGTACATCATATCCTCTGCAGCATGTGCTCTTCTTTACTTTGAGTATAAGAACATAGCCAAAAAGAGGCTTGCCCATATTAGTGGATCTGCCTCAAAGCCAAGTCATTTTACTGTTCTTATTCGTGCTATTCCTCAGTCTCCTGACCAGTCCTACAGCGAGACAGTGAGCAAATACTTTACAAATTACTATGCACCAAGCTATGTGTCGCACCTAATGGTCTACCGTGATGGCTTCATTCACAGACTGATGAATGAGACGGAGAGGATGTGTCAGGCTATAAAACATGTTTCTCCTGATTTAAGTTGTAATCCGAGTTTGAAGTCATGCGTCCTTTGTGGACCTGCAGCCACAAATTCTTTTCAAATCATCTCGAACGAGACAGACAGTGTCAAAGGATTGGAGCTTGGTGAGTTGACTTTGACTACGACAGAGGAAGAACGTCCCGTTGCTTTTGTGTTTTTCAAGAGTCGTTATGATGCTCTTGTTGTTTCAGAAGTTCTTCAAACACCAAATCCTATGTTATGGGTGGCAGACTTGGCTCCAGAGCCTCATGATGTTCACTGGAGAAATCTCAGAATACCTTATCGGCAGCTTTGGATGCGAAGAATAGCAACCCTTGTTGGTGCAATTGCCTTCATGTTTGTGTTTCTTTTTCCTGTTACCTTTGTTCAAGGGCTGACTCAACTACCAACGTTATCCAAGAATTTTCCTTTTCTAAAAGACCTCTTGAACAGGAGGTTTATGGAGCAGGTCATCACAGGGTATTTACCAAGTGTGATTTTGGTTCTATTCTTTTATACCGTTCCGCCATTGATGATGTACTTTTCAACCTTGGAGGGATGTGTTTCTCGGAGTCAAAGAAAAAAAAGTGCATGTCTCAAAATTTTATACTTCACCATCTGGAATGTGTTCTTCGTCAATATTCTATCAGGCTCTGTTATCAGGCAGTTTACCGTCTTGAATAGTGTGAGGGACGTACCTGCACAACTTGCGAAACTTGTTCCAGCACAGGCTGGCTTCTTCATGACCTATTGTTTCACGTCTGGTTGGGCCGGTTTGGCATGTGAAATCATGCAACCTGTAGGTCTTATTTGGAATCTGATTGCAAAAGTTATTGTTAAGAACAAGGAGGAGTCATATGAAACACTTAGGTTTCCCTACCATACAGAAATTCCAAGACTACTTTTGTTCGGGCTCCTGGGTTTCACCAATTCAGTCATAGCGCCTCTGATACTGCCGTTTCTGCTGATCTACTTTTTCTTCGCATATCTTATATACAAAAATCAGATAATCAACGTCTATATTACAAAGTATGAAAGCGGTGGACAATATTGGCCTGTTTTTCACAACACTACAATCTTTTCACTGATCTTGTCGCAAGTTATAGCTCTAGGCTTTTTCGGGTTAAAGCTATCAACGGTTGCTTCAGGTTTCACCATCCCGTTAATCCTTCTCACTCTTCTATTTAGTGAGTATTGCCGGCAAAGGTTTGCGCCCATATTCCAGAAATATCCAGCCGAGATTCTTATCGCTATGGACAGAGCAGATGAGATGACAGGAAAGATGGAAGAGATACATAACAACTTGAAAGTTGCATACTCTCAGATACCAACGTGTTCTGAAGAATCCAGCAAAGCTGGTTGCACTTCTCCTTGCTCAGATCAGGAGTTACCAGATTCTGAAGAGTTGAAGCCTGAGAAAGAGAATCTTAAAGCTGATTACATATGGGAGTTCCAGAGAAGTAAATCTGGTCTTGATCTTGAGGTGAAATCCTGTCCCAGTGCTTCCCCAATTCGTAATTCCCCAGGGTTTGCCGAGATCTACAAACGAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

762

Amino Acids

86.77

Weight (kDa)

8.59

Isoelectric Point (pI)

51.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 5 - 165 4.5e-37 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 186 - 341 5.9e-22 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 352 - 618 8.8e-74 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 802, 1192, 1441
AccI GTMKAC 1 cut(s) 672
AccII CGCG 1 cut(s) 176
AciI CCGC 2 cut(s) 1259, 1773
AclI AACGTT 1 cut(s) 1145
AclWI GGATC 2 cut(s) 146, 544
AcsI RAATTY 4 cut(s) 805, 1156, 1335, 1623
AcuI CTGAAG 3 cut(s) 1863, 2094, 2154
AfaI GTAC 3 cut(s) 455, 1274, 1431
AfiI CCNNNNNNNGG 1 cut(s) 516
AflIII ACRYGT 2 cut(s) 736, 2066
AjiI CACGTC 1 cut(s) 1494
AjnI CCWGG 2 cut(s) 1650, 2257
AjuI GAANNNNNNNTTGG 2 cut(s) 2236, 2268
AluBI AGCT 8 cut(s) 203, 651, 856, 1045, 1841, 1864, 2090, 2168
AluI AGCT 8 cut(s) 203, 651, 856, 1045, 1841, 1864, 2090, 2168
Alw21I GWGCWC 2 cut(s) 363, 481
Alw26I GTCTC 7 cut(s) 13, 449, 594, 605, 701, 824, 1334
AlwI GGATC 2 cut(s) 146, 544
AlwNI CAGNNNCTG 2 cut(s) 1388, 2132
AoxI GGCC 2 cut(s) 1503, 1787
ApeKI GCWGC 7 cut(s) 88, 233, 236, 279, 470, 797, 1042
ApoI RAATTY 4 cut(s) 805, 1156, 1335, 1623
AseI ATTAAT 1 cut(s) 36
Asp700I GAANNNNTTC 2 cut(s) 951, 1361
AspLEI GCGC 3 cut(s) 178, 1678, 1948
AspS9I GGNCC 2 cut(s) 791, 1503
AsuHPI GGTGA 5 cut(s) 872, 1339, 1651, 1879, 2230
AvaII GGWCC 1 cut(s) 791
BaeI ACNNNNGTAYC 4 cut(s) 1676, 1709, 2051, 2084
BanII GRGCYC 1 cut(s) 1650
BauI CACGAG 1 cut(s) 194
Bbv12I GWGCWC 2 cut(s) 363, 481
BbvI GCAGC 7 cut(s) 100, 220, 223, 291, 482, 809, 1054
BccI CCATC 7 cut(s) 262, 349, 420, 674, 1358, 1898, 2011
BceAI ACGGC 1 cut(s) 1675
BciT130I CCWGG 2 cut(s) 1652, 2259
BcoDI GTCTC 7 cut(s) 13, 449, 594, 605, 701, 824, 1334
BfaI CTAG 2 cut(s) 186, 1844
BfmI CTRYAG 4 cut(s) 468, 604, 795, 1533
BfoI RGCGCY 1 cut(s) 1679
BfuAI ACCTGC 3 cut(s) 802, 1192, 1441
BglI GCCNNNNNGGC 1 cut(s) 1511
BglII AGATCT 1 cut(s) 2271
BisI GCNGC 7 cut(s) 89, 234, 237, 280, 471, 798, 1043
BlsI GCNGC 7 cut(s) 90, 235, 238, 281, 472, 799, 1044
Bme1390I CCNGG 2 cut(s) 1652, 2259
Bme18I GGWCC 1 cut(s) 791
BmgBI CACGTC 1 cut(s) 1494
BmgT120I GGNCC 2 cut(s) 791, 1503
BmiI GGNNCC 2 cut(s) 993, 1649
BmrFI CCNGG 2 cut(s) 1652, 2259
BmrI ACTGGG 1 cut(s) 2226
BmsI GCATC 3 cut(s) 238, 919, 1041
BmuI ACTGGG 1 cut(s) 2226
BpmI CTGGAG 2 cut(s) 978, 1036
BpuEI CTTGAG 1 cut(s) 2234
BsaBI GATNNNNATC 1 cut(s) 1979
BsaJI CCNNGG 4 cut(s) 1284, 1651, 2257, 2258
BsaXI ACNNNNNCTCC 2 cut(s) 704, 734
Bsc4I CCNNNNNNNGG 1 cut(s) 516
Bse118I RCCGGY 2 cut(s) 1505, 1932
Bse1I ACTGG 3 cut(s) 598, 1019, 2232
Bse8I GATNNNNATC 1 cut(s) 1979
BseBI CCWGG 2 cut(s) 1652, 2259
BseDI CCNNGG 4 cut(s) 1284, 1651, 2257, 2258
BseGI GGATG 7 cut(s) 10, 253, 273, 723, 1056, 1298, 1890
BseJI GATNNNNATC 1 cut(s) 1979
BseLI CCNNNNNNNGG 1 cut(s) 516
BseMII CTCAG 7 cut(s) 24, 207, 599, 1039, 2069, 2124, 2139
BseNI ACTGG 3 cut(s) 598, 1019, 2232
BseRI GAGGAG 1 cut(s) 1598
BseXI GCAGC 7 cut(s) 100, 220, 223, 291, 482, 809, 1054
BseYI CCCAGC 1 cut(s) 29
BsgI GTGCAG 1 cut(s) 1419
Bsh1236I CGCG 1 cut(s) 176
BshFI GGCC 2 cut(s) 1505, 1789
BsiHKAI GWGCWC 2 cut(s) 363, 481
BsiSI CCGG 2 cut(s) 1506, 1933
BslFI GGGAC 3 cut(s) 879, 1439, 2214
BslI CCNNNNNNNGG 1 cut(s) 516
BsmAI GTCTC 7 cut(s) 13, 449, 594, 605, 701, 824, 1334
BsmBI CGTCTC 1 cut(s) 701
BsmFI GGGAC 3 cut(s) 879, 1439, 2214
BsmI GAATGC 1 cut(s) 282
BsnI GGCC 2 cut(s) 1505, 1789
Bsp1286I GDGCHC 3 cut(s) 363, 481, 1650
Bsp1407I TGTACA 1 cut(s) 453
Bsp143I GATC 7 cut(s) 151, 536, 1701, 1821, 2113, 2209, 2271
BspACI CCGC 2 cut(s) 1259, 1773
BspANI GGCC 2 cut(s) 1505, 1789
BspCNI CTCAG 7 cut(s) 23, 208, 598, 1038, 2068, 2123, 2140
BspFNI CGCG 1 cut(s) 176
BspHI TCATGA 3 cut(s) 148, 1003, 1476
BspLI GGNNCC 2 cut(s) 993, 1649
BspMAI CTGCAG 2 cut(s) 472, 799
BspMI ACCTGC 3 cut(s) 802, 1192, 1441
BspPI GGATC 2 cut(s) 146, 544
BspQI GCTCTTC 1 cut(s) 486
BsrFI RCCGGY 2 cut(s) 1505, 1932
BsrGI TGTACA 1 cut(s) 453
BsrI ACTGG 3 cut(s) 598, 1019, 2232
BssAI RCCGGY 2 cut(s) 1505, 1932
BssECI CCNNGG 4 cut(s) 1284, 1651, 2257, 2258
BssMI GATC 7 cut(s) 151, 536, 1701, 1821, 2113, 2209, 2271
BssSI CACGAG 1 cut(s) 194
BssT1I CCWWGG 1 cut(s) 1284
Bst2BI CACGAG 1 cut(s) 194
Bst2UI CCWGG 2 cut(s) 1652, 2259
Bst4CI ACNGT 7 cut(s) 565, 616, 677, 839, 1255, 1408, 1873
Bst6I CTCTTC 6 cut(s) 130, 216, 486, 1917, 2016, 2130
BstAPI GCANNNNNTGC 2 cut(s) 476, 1442
BstAUI TGTACA 1 cut(s) 453
BstC8I GCNNGC 4 cut(s) 93, 522, 1468, 1934
BstDEI CTNAG 8 cut(s) 10, 216, 585, 1025, 1601, 2055, 2110, 2148
BstF5I GGATG 7 cut(s) 10, 253, 273, 723, 1056, 1298, 1890
BstFNI CGCG 1 cut(s) 176
BstH2I RGCGCY 1 cut(s) 1679
BstHHI GCGC 3 cut(s) 178, 1678, 1948
BstKTI GATC 7 cut(s) 154, 539, 1704, 1824, 2116, 2212, 2274
BstMAI GTCTC 7 cut(s) 13, 449, 594, 605, 701, 824, 1334
BstMBI GATC 7 cut(s) 151, 536, 1701, 1821, 2113, 2209, 2271
BstMWI GCNNNNNNNGC 7 cut(s) 64, 476, 989, 1051, 1442, 1511, 1696
BstNI CCWGG 2 cut(s) 1652, 2259
BstNSI RCATGY 4 cut(s) 477, 740, 1329, 1518
BstSCI CCNGG 2 cut(s) 1650, 2257
BstSFI CTRYAG 4 cut(s) 468, 604, 795, 1533
BstUI CGCG 1 cut(s) 176
BstV1I GCAGC 7 cut(s) 100, 220, 223, 291, 482, 809, 1054
BstX2I RGATCY 2 cut(s) 536, 2271
BstXI CCANNNNNNTGG 1 cut(s) 533
BstYI RGATCY 2 cut(s) 536, 2271
BsuRI GGCC 2 cut(s) 1505, 1789
BtrI CACGTC 1 cut(s) 1494
BtsCI GGATG 7 cut(s) 10, 253, 273, 723, 1056, 1298, 1890
BtsIMutI CAGTG 6 cut(s) 213, 621, 844, 1012, 1817, 2239
BveI ACCTGC 3 cut(s) 802, 1192, 1441
Cac8I GCNNGC 4 cut(s) 93, 522, 1468, 1934
CaiI CAGNNNCTG 2 cut(s) 1388, 2132
CciI TCATGA 3 cut(s) 148, 1003, 1476
CfoI GCGC 3 cut(s) 178, 1678, 1948
Cfr10I RCCGGY 2 cut(s) 1505, 1932
Cfr13I GGNCC 2 cut(s) 791, 1503
CseI GACGC 1 cut(s) 769
Csp6I GTAC 3 cut(s) 454, 1273, 1430
CviQI GTAC 3 cut(s) 454, 1273, 1430
DdeI CTNAG 8 cut(s) 10, 216, 585, 1025, 1601, 2055, 2110, 2148
DpnI GATC 7 cut(s) 153, 538, 1703, 1823, 2115, 2211, 2273
DpnII GATC 7 cut(s) 151, 536, 1701, 1821, 2113, 2209, 2271
Eam1104I CTCTTC 6 cut(s) 130, 216, 486, 1917, 2016, 2130
EarI CTCTTC 6 cut(s) 130, 216, 486, 1917, 2016, 2130
EciI GGCGGA 1 cut(s) 1248
Eco130I CCWWGG 1 cut(s) 1284
Eco24I GRGCYC 1 cut(s) 1650
Eco47I GGWCC 1 cut(s) 791
Eco57I CTGAAG 3 cut(s) 1863, 2094, 2154
EcoRII CCWGG 2 cut(s) 1650, 2257
EcoT14I CCWWGG 1 cut(s) 1284
EcoT38I GRGCYC 1 cut(s) 1650
ErhI CCWWGG 1 cut(s) 1284
Esp3I CGTCTC 1 cut(s) 701
FalI AAGNNNNNCTT 2 cut(s) 2145, 2177
FaqI GGGAC 3 cut(s) 879, 1439, 2214
FauNDI CATATG 2 cut(s) 1591, 2177
FblI GTMKAC 1 cut(s) 672
Fnu4HI GCNGC 7 cut(s) 89, 234, 237, 280, 471, 798, 1043
FokI GGATG 7 cut(s) 17, 260, 280, 730, 1063, 1305, 1877
FriOI GRGCYC 1 cut(s) 1650
Fsp4HI GCNGC 7 cut(s) 89, 234, 237, 280, 471, 798, 1043
FspBI CTAG 2 cut(s) 186, 1844
GlaI GCGC 3 cut(s) 177, 1677, 1947
GluI GCNGC 7 cut(s) 89, 234, 237, 280, 471, 798, 1043
GsaI CCCAGC 1 cut(s) 33
GsuI CTGGAG 2 cut(s) 978, 1036
HaeII RGCGCY 1 cut(s) 1679
HaeIII GGCC 2 cut(s) 1505, 1789
HapII CCGG 2 cut(s) 1506, 1933
HgaI GACGC 1 cut(s) 769
HhaI GCGC 3 cut(s) 178, 1678, 1948
Hin6I GCGC 3 cut(s) 176, 1676, 1946
HinP1I GCGC 3 cut(s) 176, 1676, 1946
HincII GTYRAC 2 cut(s) 337, 867
HindII GTYRAC 2 cut(s) 337, 867
HindIII AAGCTT 1 cut(s) 201
HpaI GTTAAC 1 cut(s) 337
HpaII CCGG 2 cut(s) 1506, 1933
HphI GGTGA 5 cut(s) 872, 1339, 1651, 1879, 2230
Hpy166II GTNNAC 8 cut(s) 109, 337, 673, 791, 867, 1012, 1404, 1778
Hpy8I GTNNAC 8 cut(s) 109, 337, 673, 791, 867, 1012, 1404, 1778
Hpy99I CGWCG 1 cut(s) 305
HpyAV CCTTC 2 cut(s) 1096, 1913
HpyCH4III ACNGT 7 cut(s) 565, 616, 677, 839, 1255, 1408, 1873
HpyCH4IV ACGT 8 cut(s) 23, 145, 892, 1145, 1428, 1493, 1749, 2066
HpyF10VI GCNNNNNNNGC 7 cut(s) 64, 476, 989, 1051, 1442, 1511, 1696
HpyF3I CTNAG 8 cut(s) 10, 216, 585, 1025, 1601, 2055, 2110, 2148
HpySE526I ACGT 8 cut(s) 23, 145, 892, 1145, 1428, 1493, 1749, 2066
HspAI GCGC 3 cut(s) 176, 1676, 1946
KroI GCCGGC 1 cut(s) 1932
KroNI GCCGGC 1 cut(s) 1934
KspAI GTTAAC 1 cut(s) 337
Kzo9I GATC 7 cut(s) 151, 536, 1701, 1821, 2113, 2209, 2271
LguI GCTCTTC 1 cut(s) 486
LmnI GCTCC 5 cut(s) 358, 853, 997, 1198, 1653
Lsp1109I GCAGC 7 cut(s) 100, 220, 223, 291, 482, 809, 1054
LweI GCATC 3 cut(s) 238, 919, 1041
MaeI CTAG 2 cut(s) 186, 1844
MaeII ACGT 8 cut(s) 23, 145, 892, 1145, 1428, 1493, 1749, 2066
MaeIII GTNAC 3 cut(s) 327, 1111, 2121
MalI GATC 7 cut(s) 153, 538, 1703, 1823, 2115, 2211, 2273
MboI GATC 7 cut(s) 151, 536, 1701, 1821, 2113, 2209, 2271
MfeI CAATTG 2 cut(s) 399, 1080
MflI RGATCY 2 cut(s) 536, 2271
MhlI GDGCHC 3 cut(s) 363, 481, 1650
MlyI GAGTC 5 cut(s) 389, 928, 1126, 1315, 1595
MroNI GCCGGC 1 cut(s) 1932
MroXI GAANNNNTTC 2 cut(s) 951, 1361
MslI CAYNNNNRTG 3 cut(s) 266, 531, 1094
MspI CCGG 2 cut(s) 1506, 1933
MspR9I CCNGG 2 cut(s) 1652, 2259
MunI CAATTG 2 cut(s) 399, 1080
Mva1269I GAATGC 1 cut(s) 282
MvaI CCWGG 2 cut(s) 1652, 2259
MvnI CGCG 1 cut(s) 176
MwoI GCNNNNNNNGC 7 cut(s) 64, 476, 989, 1051, 1442, 1511, 1696
NaeI GCCGGC 1 cut(s) 1934
NdeI CATATG 2 cut(s) 1591, 2177
NdeII GATC 7 cut(s) 151, 536, 1701, 1821, 2113, 2209, 2271
NgoMIV GCCGGC 1 cut(s) 1932
NlaIV GGNNCC 2 cut(s) 993, 1649
NmeAIII GCCGAG 1 cut(s) 1996
NspI RCATGY 4 cut(s) 477, 740, 1329, 1518
PagI TCATGA 3 cut(s) 148, 1003, 1476
PasI CCCWGGG 1 cut(s) 2258
PciI ACATGT 1 cut(s) 736
PciSI GCTCTTC 1 cut(s) 486
PcsI WCGNNNNNNNCGW 1 cut(s) 306
PctI GAATGC 1 cut(s) 282
PdiI GCCGGC 1 cut(s) 1934
PdmI GAANNNNTTC 2 cut(s) 951, 1361
PfeI GAWTC 5 cut(s) 1549, 1975, 2078, 2129, 2158
PflFI GACNNNGTC 1 cut(s) 839
PkrI GCNGC 7 cut(s) 90, 235, 238, 281, 472, 799, 1044
PleI GAGTC 5 cut(s) 388, 927, 1126, 1314, 1594
PpsI GAGTC 5 cut(s) 388, 927, 1126, 1314, 1594
PscI ACATGT 1 cut(s) 736
PshBI ATTAAT 1 cut(s) 36
Psp1406I AACGTT 1 cut(s) 1145
Psp6I CCWGG 2 cut(s) 1650, 2257
PspFI CCCAGC 1 cut(s) 29
PspGI CCWGG 2 cut(s) 1650, 2257
PspN4I GGNNCC 2 cut(s) 993, 1649
PspPI GGNCC 2 cut(s) 791, 1503
PsrI GAACNNNNNNTAC 2 cut(s) 155, 187
PstI CTGCAG 2 cut(s) 472, 799
PstNI CAGNNNCTG 2 cut(s) 1388, 2132
PsuI RGATCY 2 cut(s) 536, 2271
PsyI GACNNNGTC 1 cut(s) 839
RsaI GTAC 3 cut(s) 455, 1274, 1431
RsaNI GTAC 3 cut(s) 454, 1273, 1430
RseI CAYNNNNRTG 3 cut(s) 266, 531, 1094
SapI GCTCTTC 1 cut(s) 486
SatI GCNGC 7 cut(s) 89, 234, 237, 280, 471, 798, 1043
Sau3AI GATC 7 cut(s) 151, 536, 1701, 1821, 2113, 2209, 2271
Sau96I GGNCC 2 cut(s) 791, 1503
SchI GAGTC 5 cut(s) 389, 928, 1126, 1315, 1595
ScrFI CCNGG 2 cut(s) 1652, 2259
SduI GDGCHC 3 cut(s) 363, 481, 1650
SfaNI GCATC 3 cut(s) 238, 919, 1041
SfcI CTRYAG 4 cut(s) 468, 604, 795, 1533
SinI GGWCC 1 cut(s) 791
SmiMI CAYNNNNRTG 3 cut(s) 266, 531, 1094
SmlI CTYRAG 1 cut(s) 2213
SmoI CTYRAG 1 cut(s) 2213
SsiI CCGC 2 cut(s) 1259, 1773
SspI AATATT 2 cut(s) 1375, 1784
SspMI CTAG 2 cut(s) 186, 1844
StyD4I CCNGG 2 cut(s) 1650, 2257
StyI CCWWGG 1 cut(s) 1284
TaaI ACNGT 7 cut(s) 565, 616, 677, 839, 1255, 1408, 1873
TaiI ACGT 8 cut(s) 26, 148, 895, 1148, 1431, 1496, 1752, 2069
TaqI TCGA 2 cut(s) 118, 824
TatI WGTACW 2 cut(s) 453, 1272
TfiI GAWTC 5 cut(s) 1549, 1975, 2078, 2129, 2158
TscAI CASTG 6 cut(s) 220, 621, 844, 1019, 1824, 2239
TseI GCWGC 7 cut(s) 88, 233, 236, 279, 470, 797, 1042
TspDTI ATGAA 8 cut(s) 250, 428, 676, 716, 1078, 1465, 1608, 1782
TspGWI ACGGA 2 cut(s) 147, 725
TspRI CASTG 6 cut(s) 220, 621, 844, 1019, 1824, 2239
Tth111I GACNNNGTC 1 cut(s) 839
VpaK11BI GGWCC 1 cut(s) 791
VspI ATTAAT 1 cut(s) 36
XapI RAATTY 4 cut(s) 805, 1156, 1335, 1623
XceI RCATGY 4 cut(s) 477, 740, 1329, 1518
XcmI CCANNNNNNNNNTGG 1 cut(s) 423
XmiI GTMKAC 1 cut(s) 672
XmnI GAANNNNTTC 2 cut(s) 951, 1361
XspI CTAG 2 cut(s) 186, 1844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.