Rorug06G0378200

CSC1-like protein RXW8

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
52452538 .. 52462013
9476 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0378200.1

Sequence Viewer

Length: 6402 bp
ATGGTGGTTGAAATTGACCTTTCCTTTTTTGACCATGAGAAATTGACAGTCTACCCTGTGGGTAGGGGTACACCACGGTCGGTTACTTTTTTACCCCAAATAGAACGGCATGTCGTCTCTTCTCGGACACACACCGTAAACCAAACTAGGGTCTCCGCTGTGAAAGTGAAACAGCCGGCCAAGATAAAAGTTTTCGCAAGCTTGGCACAAAACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGACGAAGAAGAAGAGCAGAGAGCCCAACCAACCAGAGATTCCAGATCTCTCTCTCTCTCTTCATGGACCTCCCTCAGTACCTTCACCACCATCCAAGGTACGCTTCTTCCTCCTCCTCCTCTGACCCTAATTTCCCAAACTACCCTCACCGCACCACCAACCACTACCACCACCGCCACACTCCGCCTCCTCCTCCCCAACCCCAGCCCCCACAGCTCCGCCCACAATCCCCCTCCTCCTTCAAAACCCTACCCCCTCCTCCGCCGCCACCACATCCCCAAAGGACCACCTTCTCCCCCCACCCCATCGATTCCGATCATTCCAGAACCTTCTCCCCTCGCACCACTCACCGCCCGCCACCTCTCGATTCCGACCGGCCACGTCATCGCCTCTACCTCGAGTCCGGTCCGGATTACCGGGACCGGTCCAGGAACTATTCGCCGCGCGATTACGACCGCGAATTGCATAAACCCTATAGGCGCGATCCGGACGGCGGCGGCGGCGGCGCTAGGTTTAGATCGGAGTACGAAGAACAACGGGATCGTCGAGTTGATGACGGTTATCGCCGTCGCTCGAGCAATCACGAAACGACGACGTTTCGCGAAGTGGAGTTCCAGGATTCGGGTTCGGGTTGCTACGACGAGAGCGCGTATGAGGAGCTGCTGAAGAGTGGGAGGAGATATGAGGCGTATGAGATTCAAAGGTGGGGTCTTGAGAGGGCCCAATCGGAGGAGGATTTGTACGATCCTTTCGAATTGGATGAGCACGATGAGGAGGAGGATCGGATTGTTTCGGAGAAGAGGGATTATTATGGTTCCGAATCAGGAAGAAGTAGGTGGAAGCAGATACAAAAGAAGAGTGCTTTGCTTAGGCTTCAAACCCCGAAAACCCGGGACCGGAATTACTCTGCTTATTACGATAGTTCCGGCTCCTCCGGTGGATCATTCAGAGGGAAAGAACAGTATGAGTATGAGTATTCAGGTCATGGGAGGAAGGATGCAGTAGAAGAAGAGAGGCGTGGTGGTGGAGGAGAAGAGAGAGGCCAACAACAGAGAGGTGGGAGTAGTCCTCTGGACCTTGATGTTTCGTTTAAGTCGAATTCGCTGGTAGCCAAGCCGGTTAGAACTAGGGATGAGAAGAGAGGTTCAGTTTCGGATATGGATTGTTCAGAGTCACCACCTGCTAAGCTCCGTGAGGATGTTGTAAATTTGGATAGTTTGGCACTTGTTTCGAATAAGACATCGAGTCCTGGCAAGGAGGCCATGAAGTTGAAAGGAGAAGTTACTACTTCTGGCATGAATTCGCAGCCTTGTTCTGTTGTGACTGATGAAGCGTTTGTAAATAGTGAAGTGGAAACAGCACCCAAGGGCAAGATTTTACGTAAAGATGGCAAGGATGTTGGTTCCAGTCAGAAGTCTTCTCCCAACGTTTCTAAGAAGACAAAAGTAGTGAAGAAAATAGTGGCCAAGAAGACAGTGAAAAAGGTCACAAACCCCCCCACTTCACAGCCAGAAAGTAAGATTGATGAGCCGGGGGCGAGTACTGTTCACAGTCTATTTGCAGGCACTGGCAAAGGTGAAACCTCTTCCATTTCTGATCCTTGTCCAAATGATTTGCATGTGTTGCCTGTAGATAAGGAAGTAGAAGGTTCTCTGCCGAATGTTCTATCAGATGAATATGGCACTGTTCTCAACTCTTGTAGTAAGAATATTGGGAACAACTCAAGTGCAAATTTGGGCTCTTCGAGTCCTGCAGAGATTAATACTGATCAGAAGCACCCTCTGAATGTAGATACTCCGGTCAAGGGCTTGCTTACCATTTCAAATTTTAACAGCAATGCAACTGATTCAATCAAGGTAGCTACTTGTCCTGAAACTGGCGGTGTTGTGGATGTCAGCAAATCGATCTGTCAGAGTGGAAACATTTTATTGGTTGATAAAGAGGTACAAAAAGAATCATCACAGGCCATGTTGGCTGTAGAAGGCAATTTGAGCTCTGGTTTTTTAAATTCAGATAAGATGCATGAACTCACGAATGTAAAGGGTTCTGAACATGGGGCTGAAACCTTGGAGAAACTGTCACATCAGGAAATCATTGTTCCTGATGTTGGCACTGTGGATGCAGTTAGCGAACAACCTTGTAGATATCAGCTCCCCACATCACTTCAAAATGGTGGTGTTGTGGAAGAACTTCCTAAGGCTATATCTTCAGCAGAAAATAATATGGCGGTTGGTTTATCGAGTTCAGGGGAGACCAAAGCTGTCCGCTCCAAGATTGGTAGACGTACAAGGTGGGATTCTGATGAAGTTTATGTTAAGAAAGATAAGAGCATTACAGTTTCCAATGGTGGGAATACCAATTCTTTTGGCAAGCAGTCATCACCTGATTGTGCCTCTAGATCTTTTGAAATTTGTGCCACAGAAAGATCTCCAAATATACCAAAATCAGTTGGAGATACTCATAGTGTTACACCTATGATTCAAAAGAAGAGAAAAGTTAAAACGCAGTTAGACTTTTCAAGGATATCCGACACTTGTGTAGACCCTGTAAATGTTTCTCCCGGCAAAGATGCACCGGATACAACAGTAAGTTCCTTCCTGAAGGATCCTAGTCATGCAGAAGTTTCTGTTTCTGGTGTTCAAAAGTTAGATATGGGATCACAGCCTGGTAATGATTGGGTCAGCGTTCTGAATGGGAAAAGTTCAGTAAATGGGTTTTCTGACACTAAGCTTTCAGCTAGAATTGATGCTAACTATGATACAAATGAGACTTCACCCGAGTATTCAAAGAGGAGAAAAGTGTCTGGCACTCATCTGGTATTGACTTCAGCTCAAACCAATGGAGGACCTGCAAATAAATCTACATCTTATATACAGGAATCTTCAACTCATAATGATGTTCCAACATATCAAGCGGACAAAGGTGCTTCTTCTAGCATAGGTTCTCAGTGTGCTACTTCTAATTTAATTCCATCTCCTGAGGAAATCAATGTCTATCTTGAGGACATTATGGCTGCAGTATCATCTGATACTGTAGCTGCAGCTAGGGACTCCTTTACTAATGATGATATGAAGATTAAGCACCAAGGTATTGACTCTTCTTCAGTTTCTGAAGGGTCAGGTATTCCACATATGCAAATCCCTTGTCCTTTACAATCACAGAATGAGGATAAAGAGGATGGTACTGAAGTTATGGTTGTAAATAATCATCACCTTGACATTTTGGATATAGATGGTAGTCATGAAAAAGACTTTGATGTTTGTGCAACAAATGAGCACATTATGGTTCAAGGTGAGACTGCTCCATGTACAATTCATTCAGAGCTTCAGCCTGCTGATTTGGGTATTAATTCTTTCAGTACAAATATAGAATCAGATTACCTCTGTGTTAAGGATAAACTGCCTTTTGTGCCAAGTTGTCTGCTTTCAATTGCTAATGACAATGAAGTAACTTCTACCAACTCTATTGATGAAGGCATGAAGTCTGTGTCTGATACGCTGTCAGATACAGGTACTCCAGAAACTTCAACTAGTATCACTGACGTGCATATGCTGATTTGTAATCCTTCGGTTATTAAAAGTTTTGACGAAAAAGTTTGTGCGGATGACCAGAAATTTGAGGTGAAGTCTGAGGTTGCATCCGCTGGGAATTTATTCTCAGAGACCAAAACTAATTTAACATTAGATAATGTAACTGAAGGTCACCAATCAGTCACAGAGAAGGCAGTACCTTTGAAATTGCAGGATTCCAAAAAGACATCTCATGGTCTGCATCTCATAAGTGCTGAATCTGCATTGAAGAACCAGCTGGGTCAAGCTACTCATAGGATTGTTCCAGGTCGTCCATTTTCTGCCTTTACTACCTCACAGAAGGCTACCTCTTCAACACATATATCAAAGCCTCGGACTTGGCATCGAAATGCTAATTCATCTGTATCTCCTCTTCCAGCTCAAAGGCAGTTGCCACAAAGAAATGGAAAACTTGAAAGTAATTCTTATGTTCGTAAAGGTAACACCCTTGTTAGAAGACGTGCTACAATTGCTGCTGTACCACAAAGCTCTCAAGGTCTCAGTTCATCTGTTCATCAGTTGAACTTTTCAGGTATAGATGGATTGAAGAAGAATGCAGGATCCGACAGTAGGGTTGACATTAAAAACCCTCCAAAAACAGGAGGACTCAATGCTTCTTCAGATAGGCCCCCAGCCCCACTACCCGGTGGAGCCAAAATGTCTGCATCTGCTGCCGTCTCTTCCGGGATTCCTACATCATCCCCACTAGCTGAGCCTCTTCTTAGTGATATCTCTGGAACTAAATCAGATCCTATGAATTGTTCGGAAACGAAAGATGCAGAAGGATCAGTCAAGGACTCGCTGGCAACTTCTGATACTCAGGAATACCATAGTGGTCCAGTCAACAATCTACATGATGGGAATCTGGCATCATCAAATATGAAGAAGGTTATATATGTAAAGCGAAAATTAAATCAGTTGGTTGCATCATCTTCAAATCCATCAGACCTTTCTGTCCACAATGCTGATAAGAACCAACCCTCAGATGGCTACTACAAGAGGCGCAAACATCAGCTAATTAGGTCTTCTTTGGAAAGTAATGGCAAAGATACTGTTCTCCTGCCCACTGACAATCTAAACTCAGGGGAGCAAAAGGCTCGTAAGGTTATCCCCAGTAGAACATTTAACAAGAAGCGATCACTTAAGGCTGTTGCGAGGATGAGTAAAAAGAATTCTTTGGTCTGGACACCAAGTGGTACACAGTCATCAAATAATAATGGTAGTTCATATGACCATCAGAAGGTTCTGCCTCAGCTGTTTCCGTGGAAAAGAGCAAGATACTGGAGAACTGTCATGCAAAGTCAGGCTTCCAATTTCAATTATAGTTCCTCATCAACAATCAGTAAAAAGTTGCTGCTCTCAAGGATGAGGGATACTGTATACACTAGGTCAACCCATGGATTTTCACTTAGAAAGTACAAGGTATTAAGTGTTGGTGGATCTAGTTTAAAATGGTCAAAATCCATTGAAAGTCGCTCAAAGAAAGTTAATGAGGAAGCTACACGGGCTGTTGCTGAAGTAGAGAAGAAGAAAAGAGAACACAATGGTGCTGCCTGCACTAGTTCTGGTTCTAAAATCAGAAACTCACCGGGAAAACGAATATTCCGCATTGGCTCTGTTCGTTACAAAATGGATCCTTCAAGGCGGACACTTAAGAGGATTTCAGATGACGAATCCTCAAAGTCTGTTGTGCTGAATCCAGAAACGGATGCCAAGAGATCATATGTTCCAAGGAGATTGGTGATTGGGAATGACGAATATGTGCGGATTGGAAATGGTAATCAGCTTATTAGAGATCCAAAGAAACGAACTCGCATATTGGCAAGTGAAAGAGTTAGATGGAGTTTGCACACTGCCAGACAGCGGTTGGCAAAAAAACGGAAATACTGCCAGTTTTTCACACGATTTGGGAAGTGTAACAAGGATGATGGAAAATGTCCCTATATTCATGACTCCTCCAAAATTGCAGTCTGCACAAAGTATCTGAACGGTTTATGTTCCAACCCCAACTGCAGATTAACCCACAAGGTCATTCCAGAAAGAATGCCAGACTGTTCTTTCTTTCTGCAAGGTTTATGCACCAATAAAAATTGTTCTTACAGACATGTAAATGTAAATCCGAAGGCATCTACTTGTGAAGGATTTCTTAAAGGTTATTGTGCGGACGGAAATGAGTGCCGGAAGAAGCACAGCTATGTCTGCCAGACTTTTGAAGAAACAGGAACGTGTCCTCAAGGGCCCAAATGCAAGCTTCACCACCCCAAAAAGCGTATGAAGGGAAAGATAAAGAAACGATCAAGAGAACATAGAAATGGTTGGGGACGTTACTTTGTTTCCAAGGATGTTGGTGTTTCTGAGCCCGTAACAGCGTCTGCAAAGCACTGTGCACAAAATGGTGATGACATATTTGGTAATGATTTCGTTAGCATCAATGTTAGTGACGAGGAGGCTGGAGAAAGTAATAATCCACCTGAGCAAACCACATTTTATGACAGTGATCCCTCTGAATTAGACTTGGATGATCTTGATGAACTAATTAAACCGATTCGTTTGTTGAATAAGATGAAGACAAACATTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

2133

Amino Acids

235.61

Weight (kDa)

8.85

Isoelectric Point (pI)

52.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1438
AasI GACNNNNNNGTC 1 cut(s) 4772
Acc36I ACCTGC 2 cut(s) 1438, 3106
AccBSI CCGCTC 1 cut(s) 2517
AccI GTMKAC 4 cut(s) 51, 2530, 2790, 5199
AccII CGCG 6 cut(s) 694, 696, 708, 732, 852, 899
AccIII TCCGGA 2 cut(s) 658, 736
AclI AACGTT 1 cut(s) 1677
AcoI YGGCCR 3 cut(s) 177, 626, 1713
AdeI CACNNNGTG 1 cut(s) 5012
AflII CTTAAG 2 cut(s) 4961, 5471
AflIII ACRYGT 2 cut(s) 5923, 6044
AgeI ACCGGT 1 cut(s) 672
AhdI GACNNNNNGTC 1 cut(s) 1494
AhlI ACTAGT 2 cut(s) 3779, 5378
AjiI CACGTC 3 cut(s) 632, 3793, 4280
AjnI CCWGG 5 cut(s) 677, 864, 1498, 2914, 4084
AjuI GAANNNNNNNTTGG 4 cut(s) 272, 304, 337, 369
AleI CACNNNNGTG 2 cut(s) 3791, 5364
Alw21I GWGCWC 4 cut(s) 1017, 2246, 3528, 6208
Alw26I GTCTC 8 cut(s) 121, 157, 2495, 3011, 3539, 3905, 4322, 4501
Alw44I GTGCAC 1 cut(s) 6204
AlwNI CAGNNNCTG 3 cut(s) 1817, 3359, 6191
Ama87I CYCGRG 4 cut(s) 647, 823, 1140, 3026
Aor13HI TCCGGA 2 cut(s) 658, 736
AoxI GGCC 9 cut(s) 177, 626, 969, 1291, 1509, 1713, 2214, 4445, 6056
ApaI GGGCCC 2 cut(s) 973, 6060
ApaLI GTGCAC 1 cut(s) 6204
ApeKI GCWGC 9 cut(s) 910, 1555, 3263, 3287, 3290, 4292, 4490, 5173, 5369
ArsI GACNNNNNNTTYG 8 cut(s) 943, 975, 3379, 3411, 3848, 3880, 5772, 5804
AseI ATTAAT 2 cut(s) 2010, 3597
AsiGI ACCGGT 1 cut(s) 672
Asp700I GAANNNNTTC 3 cut(s) 2439, 3902, 5961
AspLEI GCGC 5 cut(s) 696, 732, 758, 899, 4824
AsuC2I CCSGG 8 cut(s) 668, 1141, 1142, 1782, 2811, 4464, 4504, 5409
AsuII TTCGAA 2 cut(s) 1002, 1481
AvaI CYCGRG 4 cut(s) 647, 823, 1140, 3026
AvaII GGWCC 9 cut(s) 316, 534, 656, 670, 675, 1144, 1324, 3095, 4655
AxyI CCTNAGG 2 cut(s) 2445, 3228
BaeGI GKGCMC 3 cut(s) 973, 6060, 6208
BaeI ACNNNNGTAYC 6 cut(s) 2034, 2067, 2820, 2853, 3423, 3456
BalI TGGCCA 1 cut(s) 1715
BamHI GGATCC 3 cut(s) 2854, 4379, 5452
BanII GRGCYC 6 cut(s) 275, 973, 1991, 2246, 6060, 6180
BarI GAAGNNNNNNTAC 6 cut(s) 3331, 3363, 4176, 4208, 4267, 4299
BbsI GAAGAC 7 cut(s) 256, 1659, 1694, 1727, 4282, 4836, 6392
Bbv12I GWGCWC 4 cut(s) 1017, 2246, 3528, 6208
BbvCI CCTCAGC 1 cut(s) 5070
BbvI GCAGC 9 cut(s) 897, 1567, 3250, 3274, 3302, 4279, 4477, 5160, 5356
BceAI ACGGC 4 cut(s) 122, 757, 801, 4478
BcgI CGANNNNNNTGC 4 cut(s) 1461, 1495, 4898, 4932
BciT130I CCWGG 5 cut(s) 679, 866, 1500, 2916, 4086
BciVI GTATCC 2 cut(s) 2821, 5185
BclI TGATCA 1 cut(s) 2017
BcnI CCSGG 8 cut(s) 668, 1141, 1142, 1782, 2811, 4464, 4504, 5409
BcoDI GTCTC 8 cut(s) 121, 157, 2495, 3011, 3539, 3905, 4322, 4501
BcuI ACTAGT 2 cut(s) 3779, 5378
BfmI CTRYAG 8 cut(s) 724, 1878, 2001, 2226, 3264, 3282, 3288, 5830
BfoI RGCGCY 1 cut(s) 759
BfrI CTTAAG 2 cut(s) 4961, 5471
BfuAI ACCTGC 2 cut(s) 1438, 3106
BfuI GTATCC 2 cut(s) 2821, 5185
BglI GCCNNNNNGGC 1 cut(s) 2222
BglII AGATCT 3 cut(s) 294, 2648, 2675
BlpI GCTNAGC 2 cut(s) 1434, 4530
BmcAI AGTACT 1 cut(s) 1792
Bme18I GGWCC 9 cut(s) 316, 534, 656, 670, 675, 1144, 1324, 3095, 4655
BmeRI GACNNNNNGTC 1 cut(s) 1494
BmeT110I CYCGRG 4 cut(s) 647, 823, 1140, 3026
BmgBI CACGTC 3 cut(s) 632, 3793, 4280
BmrI ACTGGG 1 cut(s) 4926
BmuI ACTGGG 1 cut(s) 4926
BpiI GAAGAC 7 cut(s) 256, 1659, 1694, 1727, 4282, 4836, 6392
BplI GAGNNNNNCTC 2 cut(s) 1303, 1335
BpmI CTGGAG 3 cut(s) 3750, 5122, 6291
Bpu10I CCTNAGC 3 cut(s) 1118, 5070, 6291
Bpu1102I GCTNAGC 2 cut(s) 1434, 4530
Bpu14I TTCGAA 2 cut(s) 1002, 1481
BpuEI CTTGAG 6 cut(s) 983, 1957, 3269, 4296, 5164, 6036
BpuMI CCSGG 8 cut(s) 668, 1141, 1142, 1782, 2811, 4464, 4504, 5409
Bsa29I ATCGAT 2 cut(s) 558, 2153
BsaAI YACGTR 1 cut(s) 1631
BsaBI GATNNNNATC 2 cut(s) 564, 4680
BsaI GGTCTC 4 cut(s) 157, 2495, 3905, 4322
BsaWI WCCGGW 8 cut(s) 653, 658, 672, 736, 1146, 1184, 2047, 2824
BsaXI ACNNNNNCTCC 8 cut(s) 421, 451, 974, 1004, 2312, 2342, 3748, 3778
Bse118I RCCGGY 4 cut(s) 175, 624, 672, 1366
Bse1I ACTGG 7 cut(s) 1656, 1822, 2131, 4658, 4932, 5105, 5710
Bse21I CCTNAGG 2 cut(s) 2445, 3228
Bse3DI GCAATG 1 cut(s) 2092
Bse8I GATNNNNATC 2 cut(s) 564, 4680
BseAI TCCGGA 2 cut(s) 658, 736
BseBI CCWGG 5 cut(s) 679, 866, 1500, 2916, 4086
BseCI ATCGAT 2 cut(s) 558, 2153
BseJI GATNNNNATC 2 cut(s) 564, 4680
BseMI GCAATG 1 cut(s) 2092
BseNI ACTGG 7 cut(s) 1656, 1822, 2131, 4658, 4932, 5105, 5710
BseSI GKGCMC 3 cut(s) 973, 6060, 6208
BseXI GCAGC 9 cut(s) 897, 1567, 3250, 3274, 3302, 4279, 4477, 5160, 5356
BseYI CCCAGC 4 cut(s) 453, 3893, 4057, 4450
BsgI GTGCAG 2 cut(s) 5359, 5776
Bsh1236I CGCG 6 cut(s) 694, 696, 708, 732, 852, 899
Bsh1285I CGRYCG 3 cut(s) 80, 625, 706
BshFI GGCC 9 cut(s) 179, 628, 971, 1293, 1511, 1715, 2216, 4447, 6058
BshTI ACCGGT 1 cut(s) 672
BshVI ATCGAT 2 cut(s) 558, 2153
BsiEI CGRYCG 3 cut(s) 80, 625, 706
BsiHKAI GWGCWC 4 cut(s) 1017, 2246, 3528, 6208
BsiHKCI CYCGRG 4 cut(s) 647, 823, 1140, 3026
BslFI GGGAC 5 cut(s) 683, 1157, 3311, 5742, 6153
BsmAI GTCTC 8 cut(s) 121, 157, 2495, 3011, 3539, 3905, 4322, 4501
BsmBI CGTCTC 2 cut(s) 121, 4501
BsmFI GGGAC 5 cut(s) 683, 1157, 3311, 5742, 6153
BsmI GAATGC 2 cut(s) 4378, 5868
BsnI GGCC 9 cut(s) 179, 628, 971, 1293, 1511, 1715, 2216, 4447, 6058
Bso31I GGTCTC 4 cut(s) 157, 2495, 3905, 4322
BsoBI CYCGRG 4 cut(s) 647, 823, 1140, 3026
Bsp119I TTCGAA 2 cut(s) 1002, 1481
Bsp120I GGGCCC 2 cut(s) 969, 6056
Bsp1286I GDGCHC 9 cut(s) 275, 973, 1017, 1991, 2246, 3528, 6060, 6180, 6208
Bsp13I TCCGGA 2 cut(s) 658, 736
Bsp1407I TGTACA 1 cut(s) 3557
Bsp1720I GCTNAGC 2 cut(s) 1434, 4530
Bsp19I CCATGG 1 cut(s) 5215
Bsp68I TCGCGA 1 cut(s) 852
BspANI GGCC 9 cut(s) 179, 628, 971, 1293, 1511, 1715, 2216, 4447, 6058
BspDI ATCGAT 2 cut(s) 558, 2153
BspEI TCCGGA 2 cut(s) 658, 736
BspFNI CGCG 6 cut(s) 694, 696, 708, 732, 852, 899
BspHI TCATGA 2 cut(s) 3490, 5767
BspMAI CTGCAG 4 cut(s) 2005, 3268, 3292, 5834
BspMI ACCTGC 2 cut(s) 1438, 3106
BspQI GCTCTTC 2 cut(s) 256, 1996
BspT104I TTCGAA 2 cut(s) 1002, 1481
BspTI CTTAAG 2 cut(s) 4961, 5471
BspTNI GGTCTC 4 cut(s) 157, 2495, 3905, 4322
BsrBI CCGCTC 1 cut(s) 2517
BsrDI GCAATG 1 cut(s) 2092
BsrFI RCCGGY 4 cut(s) 175, 624, 672, 1366
BsrGI TGTACA 1 cut(s) 3557
BsrI ACTGG 7 cut(s) 1656, 1822, 2131, 4658, 4932, 5105, 5710
BssAI RCCGGY 4 cut(s) 175, 624, 672, 1366
BssNAI GTATAC 1 cut(s) 5200
BssT1I CCWWGG 7 cut(s) 344, 1614, 2316, 3334, 5215, 5549, 6156
Bst1107I GTATAC 1 cut(s) 5200
Bst2UI CCWGG 5 cut(s) 679, 866, 1500, 2916, 4086
BstAFI CTTAAG 2 cut(s) 4961, 5471
BstAPI GCANNNNNTGC 2 cut(s) 1873, 4490
BstAUI TGTACA 1 cut(s) 3557
BstBAI YACGTR 1 cut(s) 1631
BstBI TTCGAA 2 cut(s) 1002, 1481
BstDSI CCRYGG 3 cut(s) 74, 5081, 5215
BstEII GGTNACC 1 cut(s) 3950
BstFNI CGCG 6 cut(s) 694, 696, 708, 732, 852, 899
BstH2I RGCGCY 1 cut(s) 759
BstHHI GCGC 5 cut(s) 696, 732, 758, 899, 4824
BstMAI GTCTC 8 cut(s) 121, 157, 2495, 3011, 3539, 3905, 4322, 4501
BstMCI CGRYCG 3 cut(s) 80, 625, 706
BstNI CCWGG 5 cut(s) 679, 866, 1500, 2916, 4086
BstNSI RCATGY 3 cut(s) 113, 1871, 5927
BstPI GGTNACC 1 cut(s) 3950
BstSFI CTRYAG 8 cut(s) 724, 1878, 2001, 2226, 3264, 3282, 3288, 5830
BstSLI GKGCMC 3 cut(s) 973, 6060, 6208
BstSNI TACGTA 1 cut(s) 1631
BstUI CGCG 6 cut(s) 694, 696, 708, 732, 852, 899
BstV1I GCAGC 9 cut(s) 897, 1567, 3250, 3274, 3302, 4279, 4477, 5160, 5356
BstV2I GAAGAC 7 cut(s) 256, 1659, 1694, 1727, 4282, 4836, 6392
BstX2I RGATCY 9 cut(s) 294, 2648, 2675, 2854, 4379, 4567, 5258, 5452, 5614
BstYI RGATCY 9 cut(s) 294, 2648, 2675, 2854, 4379, 4567, 5258, 5452, 5614
BstZ17I GTATAC 1 cut(s) 5200
Bsu15I ATCGAT 2 cut(s) 558, 2153
Bsu36I CCTNAGG 2 cut(s) 2445, 3228
BsuI GTATCC 2 cut(s) 2821, 5185
BsuRI GGCC 9 cut(s) 179, 628, 971, 1293, 1511, 1715, 2216, 4447, 6058
BsuTUI ATCGAT 2 cut(s) 558, 2153
BtgI CCRYGG 3 cut(s) 74, 5081, 5215
BtgZI GCGATG 1 cut(s) 620
BtrI CACGTC 3 cut(s) 632, 3793, 4280
BtsI GCAGTG 1 cut(s) 5670
BtuMI TCGCGA 1 cut(s) 852
BveI ACCTGC 2 cut(s) 1438, 3106
CaiI CAGNNNCTG 3 cut(s) 1817, 3359, 6191
CciI TCATGA 2 cut(s) 3490, 5767
CfoI GCGC 5 cut(s) 696, 732, 758, 899, 4824
Cfr10I RCCGGY 4 cut(s) 175, 624, 672, 1366
Cfr9I CCCGGG 1 cut(s) 1140
ClaI ATCGAT 2 cut(s) 558, 2153
CpoI CGGWCCG 1 cut(s) 656
CseI GACGC 1 cut(s) 6177
CspAI ACCGGT 1 cut(s) 672
CspI CGGWCCG 1 cut(s) 656
DraI TTTAAA 2 cut(s) 2256, 5268
DraIII CACNNNGTG 1 cut(s) 5012
DrdI GACNNNNNNGTC 1 cut(s) 4772
DriI GACNNNNNGTC 1 cut(s) 1494
DseDI GACNNNNNNGTC 1 cut(s) 4772
EaeI YGGCCR 3 cut(s) 177, 626, 1713
Eam1105I GACNNNNNGTC 1 cut(s) 1494
EciI GGCGGA 4 cut(s) 423, 458, 501, 5479
Ecl136II GAGCTC 1 cut(s) 2244
Eco105I TACGTA 1 cut(s) 1631
Eco130I CCWWGG 7 cut(s) 344, 1614, 2316, 3334, 5215, 5549, 6156
Eco24I GRGCYC 6 cut(s) 275, 973, 1991, 2246, 6060, 6180
Eco31I GGTCTC 4 cut(s) 157, 2495, 3905, 4322
Eco32I GATATC 3 cut(s) 2396, 2775, 4549
Eco47I GGWCC 9 cut(s) 316, 534, 656, 670, 675, 1144, 1324, 3095, 4655
Eco53kI GAGCTC 1 cut(s) 2244
Eco81I CCTNAGG 2 cut(s) 2445, 3228
Eco88I CYCGRG 4 cut(s) 647, 823, 1140, 3026
Eco91I GGTNACC 1 cut(s) 3950
EcoICRI GAGCTC 1 cut(s) 2244
EcoO109I RGGNCCY 4 cut(s) 969, 3095, 4446, 6056
EcoO65I GGTNACC 1 cut(s) 3950
EcoRI GAATTC 3 cut(s) 1348, 1549, 4990
EcoRII CCWGG 5 cut(s) 677, 864, 1498, 2914, 4084
EcoRV GATATC 3 cut(s) 2396, 2775, 4549
EcoT14I CCWWGG 7 cut(s) 344, 1614, 2316, 3334, 5215, 5549, 6156
EcoT22I ATGCAT 1 cut(s) 2274
EcoT38I GRGCYC 6 cut(s) 275, 973, 1991, 2246, 6060, 6180
ErhI CCWWGG 7 cut(s) 344, 1614, 2316, 3334, 5215, 5549, 6156
Esp3I CGTCTC 2 cut(s) 121, 4501
FalI AAGNNNNNCTT 8 cut(s) 337, 369, 4228, 4260, 5110, 5142, 5949, 5981
FaqI GGGAC 5 cut(s) 683, 1157, 3311, 5742, 6153
FauI CCCGC 1 cut(s) 612
FauNDI CATATG 4 cut(s) 3381, 3798, 5047, 5542
FbaI TGATCA 1 cut(s) 2017
FblI GTMKAC 4 cut(s) 51, 2530, 2790, 5199
FriOI GRGCYC 6 cut(s) 275, 973, 1991, 2246, 6060, 6180
GlaI GCGC 5 cut(s) 695, 731, 757, 898, 4823
GsaI CCCAGC 4 cut(s) 457, 3897, 4061, 4454
GsuI CTGGAG 3 cut(s) 3750, 5122, 6291
HaeII RGCGCY 1 cut(s) 759
HaeIII GGCC 9 cut(s) 179, 628, 971, 1293, 1511, 1715, 2216, 4447, 6058
HgaI GACGC 1 cut(s) 6177
HhaI GCGC 5 cut(s) 696, 732, 758, 899, 4824
Hin6I GCGC 5 cut(s) 694, 730, 756, 897, 4822
HinP1I GCGC 5 cut(s) 694, 730, 756, 897, 4822
HincII GTYRAC 3 cut(s) 4396, 4663, 5211
HindII GTYRAC 3 cut(s) 4396, 4663, 5211
HindIII AAGCTT 3 cut(s) 199, 2978, 6068
Hpy99I CGWCG 5 cut(s) 798, 822, 844, 847, 893
HpyCH4IV ACGT 9 cut(s) 631, 845, 1630, 1677, 2533, 3792, 4279, 6044, 6142
HpySE526I ACGT 9 cut(s) 631, 845, 1630, 1677, 2533, 3792, 4279, 6044, 6142
HspAI GCGC 5 cut(s) 694, 730, 756, 897, 4822
Kpn2I TCCGGA 2 cut(s) 658, 736
KroI GCCGGC 1 cut(s) 175
KroNI GCCGGC 1 cut(s) 177
Ksp22I TGATCA 1 cut(s) 2017
LguI GCTCTTC 2 cut(s) 256, 1996
LmnI GCTCC 9 cut(s) 471, 907, 1184, 1443, 2406, 2522, 3556, 4469, 4906
Lsp1109I GCAGC 9 cut(s) 897, 1567, 3250, 3274, 3302, 4279, 4477, 5160, 5356
MaeII ACGT 9 cut(s) 631, 845, 1630, 1677, 2533, 3792, 4279, 6044, 6142
MbiI CCGCTC 1 cut(s) 2517
MfeI CAATTG 2 cut(s) 3678, 4287
MflI RGATCY 9 cut(s) 294, 2648, 2675, 2854, 4379, 4567, 5258, 5452, 5614
MhlI GDGCHC 9 cut(s) 275, 973, 1017, 1991, 2246, 3528, 6060, 6180, 6208
MlsI TGGCCA 1 cut(s) 1715
MluNI TGGCCA 1 cut(s) 1715
MlyI GAGTC 9 cut(s) 659, 1430, 1504, 2005, 3293, 3338, 4419, 4610, 5765
MmeI TCCRAC 6 cut(s) 645, 2680, 2802, 3176, 4407, 5844
Mox20I TGGCCA 1 cut(s) 1715
Mph1103I ATGCAT 1 cut(s) 2274
MroI TCCGGA 2 cut(s) 658, 736
MroNI GCCGGC 1 cut(s) 175
MroXI GAANNNNTTC 3 cut(s) 2439, 3902, 5961
MscI TGGCCA 1 cut(s) 1715
MslI CAYNNNNRTG 7 cut(s) 3144, 3791, 4167, 5364, 5928, 6012, 6129
Msp20I TGGCCA 1 cut(s) 1715
MspA1I CMGCKG 5 cut(s) 158, 3893, 4057, 5074, 5683
MspCI CTTAAG 2 cut(s) 4961, 5471
MunI CAATTG 2 cut(s) 3678, 4287
Mva1269I GAATGC 2 cut(s) 4378, 5868
MvaI CCWGG 5 cut(s) 679, 866, 1500, 2916, 4086
MvnI CGCG 6 cut(s) 694, 696, 708, 732, 852, 899
NaeI GCCGGC 1 cut(s) 177
NciI CCSGG 8 cut(s) 668, 1141, 1142, 1782, 2811, 4464, 4504, 5409
NcoI CCATGG 1 cut(s) 5215
NdeI CATATG 4 cut(s) 3381, 3798, 5047, 5542
NgoMIV GCCGGC 1 cut(s) 175
NmuCI GTSAC 7 cut(s) 1422, 1570, 1735, 2328, 3950, 3961, 6257
NruI TCGCGA 1 cut(s) 852
NsiI ATGCAT 1 cut(s) 2274
NspI RCATGY 3 cut(s) 113, 1871, 5927
NspV TTCGAA 2 cut(s) 1002, 1481
OliI CACNNNNGTG 2 cut(s) 3791, 5364
PaeR7I CTCGAG 2 cut(s) 647, 823
PagI TCATGA 2 cut(s) 3490, 5767
PaqCI CACCTGC 1 cut(s) 1438
PciI ACATGT 1 cut(s) 5923
PciSI GCTCTTC 2 cut(s) 256, 1996
PcsI WCGNNNNNNNCGW 3 cut(s) 793, 999, 1343
PctI GAATGC 2 cut(s) 4378, 5868
PdiI GCCGGC 1 cut(s) 177
PdmI GAANNNNTTC 3 cut(s) 2439, 3902, 5961
PfoI TCCNGGA 3 cut(s) 677, 864, 4502
PinAI ACCGGT 1 cut(s) 672
PleI GAGTC 9 cut(s) 658, 1429, 1503, 2004, 3293, 3338, 4419, 4610, 5765
PpsI GAGTC 9 cut(s) 658, 1429, 1503, 2004, 3293, 3338, 4419, 4610, 5765
Ppu21I YACGTR 1 cut(s) 1631
PpuMI RGGWCCY 1 cut(s) 3095
PscI ACATGT 1 cut(s) 5923
PshBI ATTAAT 2 cut(s) 2010, 3597
Psp124BI GAGCTC 1 cut(s) 2246
Psp1406I AACGTT 1 cut(s) 1677
Psp5II RGGWCCY 1 cut(s) 3095
Psp6I CCWGG 5 cut(s) 677, 864, 1498, 2914, 4084
PspEI GGTNACC 1 cut(s) 3950
PspFI CCCAGC 4 cut(s) 453, 3893, 4057, 4450
PspGI CCWGG 5 cut(s) 677, 864, 1498, 2914, 4084
PspOMI GGGCCC 2 cut(s) 969, 6056
PspPPI RGGWCCY 1 cut(s) 3095
PspXI VCTCGAGB 2 cut(s) 647, 823
PstI CTGCAG 4 cut(s) 2005, 3268, 3292, 5834
PstNI CAGNNNCTG 3 cut(s) 1817, 3359, 6191
PsuI RGATCY 9 cut(s) 294, 2648, 2675, 2854, 4379, 4567, 5258, 5452, 5614
PvuII CAGCTG 2 cut(s) 4057, 5074
RruI TCGCGA 1 cut(s) 852
RseI CAYNNNNRTG 7 cut(s) 3144, 3791, 4167, 5364, 5928, 6012, 6129
Rsr2I CGGWCCG 1 cut(s) 656
RsrII CGGWCCG 1 cut(s) 656
SacI GAGCTC 1 cut(s) 2246
SapI GCTCTTC 2 cut(s) 256, 1996
ScaI AGTACT 1 cut(s) 1792
SchI GAGTC 9 cut(s) 659, 1430, 1504, 2005, 3293, 3338, 4419, 4610, 5765
SduI GDGCHC 9 cut(s) 275, 973, 1017, 1991, 2246, 3528, 6060, 6180, 6208
SfcI CTRYAG 8 cut(s) 724, 1878, 2001, 2226, 3264, 3282, 3288, 5830
Sfr274I CTCGAG 2 cut(s) 647, 823
SfuI TTCGAA 2 cut(s) 1002, 1481
SinI GGWCC 9 cut(s) 316, 534, 656, 670, 675, 1144, 1324, 3095, 4655
SlaI CTCGAG 2 cut(s) 647, 823
SmaI CCCGGG 1 cut(s) 1142
SmiMI CAYNNNNRTG 7 cut(s) 3144, 3791, 4167, 5364, 5928, 6012, 6129
SnaBI TACGTA 1 cut(s) 1631
SpeI ACTAGT 2 cut(s) 3779, 5378
SspI AATATT 2 cut(s) 1960, 5421
SstI GAGCTC 1 cut(s) 2246
StyI CCWWGG 7 cut(s) 344, 1614, 2316, 3334, 5215, 5549, 6156
TaiI ACGT 9 cut(s) 634, 848, 1633, 1680, 2536, 3795, 4282, 6047, 6145
TatI WGTACW 4 cut(s) 1790, 3557, 3608, 5235
TauI GCSGC 6 cut(s) 517, 694, 747, 750, 753, 756
TseFI GTSAC 7 cut(s) 1422, 1570, 1735, 2328, 3950, 3961, 6257
TseI GCWGC 9 cut(s) 910, 1555, 3263, 3287, 3290, 4292, 4490, 5173, 5369
Tsp45I GTSAC 7 cut(s) 1422, 1570, 1735, 2328, 3950, 3961, 6257
TspGWI ACGGA 5 cut(s) 1430, 5070, 5540, 5713, 6000
TspMI CCCGGG 1 cut(s) 1140
Vha464I CTTAAG 2 cut(s) 4961, 5471
VneI GTGCAC 1 cut(s) 6204
VpaK11BI GGWCC 9 cut(s) 316, 534, 656, 670, 675, 1144, 1324, 3095, 4655
VspI ATTAAT 2 cut(s) 2010, 3597
XbaI TCTAGA 1 cut(s) 2645
XceI RCATGY 3 cut(s) 113, 1871, 5927
XcmI CCANNNNNNNNNTGG 2 cut(s) 4802, 5683
XhoI CTCGAG 2 cut(s) 647, 823
XmaI CCCGGG 1 cut(s) 1140
XmiI GTMKAC 4 cut(s) 51, 2530, 2790, 5199
XmnI GAANNNNTTC 3 cut(s) 2439, 3902, 5961
ZrmI AGTACT 1 cut(s) 1792
Zsp2I ATGCAT 1 cut(s) 2274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.