RchiOBHm_Chr6g0310211

CSC1-like protein RXW8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0003874
Physical Location & Seq
Forward (+)
67607286 .. 67614154
6869 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27896

Sequence Viewer

Length: 2229 bp
ATGAATCTTGCAGCTCTTGGGACTTCTGCTGGAATTAATGTAGCCGTGTGTGTCGTAGTTTTTTCACTATATTCCATATTAAGAAAGCAACCAAGCCAGGTTACGGTCTACTTTGGGCGAAGGCTTTCAACAGACACAAGAAAAAGTAATAAGTTGTGCTTGGATAGATTTGTTCCCTCTGCTAGTTGGATAGTGAAAGCCTGGAAAACAACAGAAGATGAATTATTGACTACTGGTGGCTTGGATAGTGTGGTTTTTATGAGGATAATTGTCTTCAGTCTTCGGATCTTTTCCATTGCTGCCATCACATGTGTTTTTATAGTGCTTCCAGTGAATTATCGAGGAAAAGTGCTTGGCCACAAGCGTATCCCTTTAGAAACATTGGAAGTATTTACCATCTTGAATGTTCAAGAGGGTTCAAAGTGGCTCTGGACCCATTGTCTCGCATTGTACGTTATTACGTTTTCAGCTTGTGTTCTCCTTTACGTCGAGTATAAGAGGATCACTAAAATGAGACTGGCACATATTAATGGATCTCCTTTAAATCCAAGTCATTTTACAGTTGTTGTTCGTGCTATTCCCTGGTCTCCGGAAGAATCCTACGGTGATTCAGTTCGAAAATTCTTCATGAAGTATCATGAGTCAAGCTACTTGTCTCACCAAATGGTGTACCGATCTGGTAGAGTTCAGAAACTGATGAGCAATGCACGGAAGATGTGCAAGATCTTGAAGGATGTTTCTATTGAACAAAAGCATAAACCAGGCTTATATCATTGTGGTTTTTGTGGAGCACATTCTGATTCTTTTAAGATTCTCTCACATGAATCAGAAAGTGCTAGAGGGAAGTCATTCCTTATTGACGATGGTTATGGTGGAAAGAGAAAAAAGGTGTGTGCTGCTGCTTTTGTCTTTTTCAAGACTCGCTATGCTGCTGTTGTTACTTCACAGGTTCTTCACTCATCAAATCCCATGCAATGGGTGACACAGTTGGCTCCAGAGCCACATGATGTCTACTGGTCAAACCTTTGGATACCATATGGACAATTGTGGATCCGTAAGATAGCTACACTTGTGGCTGCTGTTGCCTTTATGCTTGTGTTTCTTCTTCCTGTCACAATCGTTCAAGGAATGACGCACGCAGATAAGCTACAAAAAACAATACCGTTTCTGGAAGGTCCTCTTAAGAGGAAATTTATAAGCCAGCTGCTGACGGGTTACCTACCAAGTGTGGTTTTAATTGTGGCTTTTTATACAGTTCCACCAATTATGATGCTTATTTCAACACTGGAGGGTTCTATCTCCCGCAGTGGGAGGAAAAAGAGTGCATGCTTCAAAATCTTATACTTCACTATCTGGAATGTCTTTGTTATGAATGTCTTTACTGGGACTGTCATGGATACAGTCGGTATAATTAATAAACTCGATAGTGTGAAAGACTTACCTGCCCAACTTGCAAGTGCCATTCCTGCACAGGCTAAATTCTTCATGACTTATGTTTTATCATCTGGTTGGGCGGGCTTGGCATGTGAACTCATGCAGCTTTATCCTCTTCTTTGCAACTTTATCCGAAGATATATATTCAGAATGAAAGATTGGGCTATTGGCACAATGTCTTTTCCATATCATACAGAAATTCCTAGACTCCTGCTGTTTGGGTTCATTGGCTTCACTTGTTCCATCATGGTTCCCCTAATATTGCCATTCTTGCTGGTTTACTTCACACTTGCTTACTTTATATATCGAAATCAGATGATCAATGTATATATAAGAAAATATGAAACCGGGGGACATTTCTGGCCTTTGGTTCACAATACAGTAATTTTCTCATTGGTTATGATGCAAATAATTGCTCTCGGTGTCTTTGGATTAAGACAATCACCAGTTTCATCAGGGTTCACTATTCCACTGGTTATTTTCACTTTTTTGTTTAATCAGTACTGTCGACAGCGATTTCTTCCAGTATTCAAGAACCATGTTGCAGAGATTCTCATTGACATGGATCGGGAAGATGAGAAATATGGGAGGACTGAAGAGATTCATCAACAGTTGCATGCAGCCTATTGCCAGTCCCCTTCAACTTCTCCTGACTCGAGTATGGCAGGCTCATATCATCACCAGGAAGAAGACAGCATTCAGGATCCAGAGAATGTGACACCAGGAAAGGAAGTCAGCCAAGTAAGTCCATCATGGTCCATTGCTAGCACATTTGGTGCCCCAGAGGCAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

742

Amino Acids

84.17

Weight (kDa)

9.37

Isoelectric Point (pI)

40.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 6 - 163 4.9e-35 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 185 - 341 2.7e-27 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 352 - 621 2.5e-70 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1196
Acc36I ACCTGC 1 cut(s) 1450
AccB1I GGYRCC 1 cut(s) 2210
AccB7I CCANNNNNTGG 1 cut(s) 975
AccI GTMKAC 3 cut(s) 108, 1011, 1942
AccIII TCCGGA 1 cut(s) 589
AciI CCGC 2 cut(s) 1303, 1514
AclWI GGATC 8 cut(s) 293, 509, 541, 1045, 1058, 2007, 2132, 2145
AcoI YGGCCR 1 cut(s) 355
AcsI RAATTY 4 cut(s) 620, 1190, 1478, 1632
AcuI CTGAAG 2 cut(s) 259, 2049
AfaI GTAC 3 cut(s) 452, 671, 1937
AfiI CCNNNNNNNGG 3 cut(s) 103, 975, 1308
AflII CTTAAG 1 cut(s) 1181
AflIII ACRYGT 1 cut(s) 308
AhdI GACNNNNNGTC 1 cut(s) 438
AjnI CCWGG 6 cut(s) 96, 200, 581, 760, 2115, 2155
AjuI GAANNNNNNNTTGG 2 cut(s) 1576, 1608
AluBI AGCT 7 cut(s) 14, 470, 648, 1064, 1147, 1204, 1540
AluI AGCT 7 cut(s) 14, 470, 648, 1064, 1147, 1204, 1540
Alw21I GWGCWC 1 cut(s) 793
Alw26I GTCTC 4 cut(s) 446, 508, 591, 660
AlwI GGATC 8 cut(s) 293, 509, 541, 1045, 1058, 2007, 2132, 2145
AlwNI CAGNNNCTG 2 cut(s) 694, 1207
Ama87I CYCGRG 1 cut(s) 2089
Aor13HI TCCGGA 1 cut(s) 589
AoxI GGCC 2 cut(s) 355, 1796
ApeKI GCWGC 9 cut(s) 11, 299, 896, 899, 929, 1076, 1204, 1537, 2054
ApoI RAATTY 4 cut(s) 620, 1190, 1478, 1632
AseI ATTAAT 3 cut(s) 36, 528, 1413
Asp700I GAANNNNTTC 3 cut(s) 124, 848, 2034
AspS9I GGNCC 3 cut(s) 432, 1175, 2190
AsuC2I CCSGG 1 cut(s) 1783
AsuHPI GGTGA 5 cut(s) 617, 650, 991, 1869, 2105
AsuII TTCGAA 1 cut(s) 616
AsuNHI GCTAGC 1 cut(s) 2198
AvaI CYCGRG 1 cut(s) 2089
AvaII GGWCC 3 cut(s) 432, 1175, 2190
BaeGI GKGCMC 1 cut(s) 2215
BaeI ACNNNNGTAYC 2 cut(s) 349, 382
BalI TGGCCA 1 cut(s) 357
BamHI GGATCC 2 cut(s) 1050, 2137
BanI GGYRCC 1 cut(s) 2210
BbsI GAAGAC 3 cut(s) 265, 272, 2130
Bbv12I GWGCWC 1 cut(s) 793
BbvI GCAGC 9 cut(s) 23, 286, 883, 886, 916, 1063, 1191, 1549, 2066
BccI CCATC 5 cut(s) 311, 404, 857, 1685, 2191
BceAI ACGGC 1 cut(s) 29
BciT130I CCWGG 6 cut(s) 98, 202, 583, 762, 2117, 2157
BciVI GTATCC 3 cut(s) 377, 1023, 1390
BclI TGATCA 1 cut(s) 1752
BcnI CCSGG 1 cut(s) 1783
BcoDI GTCTC 4 cut(s) 446, 508, 591, 660
BfaI CTAG 4 cut(s) 183, 837, 1638, 2199
BfrI CTTAAG 1 cut(s) 1181
BfuAI ACCTGC 1 cut(s) 1450
BfuI GTATCC 3 cut(s) 377, 1023, 1390
BglI GCCNNNNNGGC 1 cut(s) 2219
BglII AGATCT 1 cut(s) 723
BisI GCNGC 9 cut(s) 12, 300, 897, 900, 930, 1077, 1205, 1538, 2055
BlsI GCNGC 9 cut(s) 13, 301, 898, 901, 931, 1078, 1206, 1539, 2056
BmcAI AGTACT 1 cut(s) 1937
Bme1390I CCNGG 7 cut(s) 98, 202, 583, 762, 1783, 2117, 2157
Bme18I GGWCC 3 cut(s) 432, 1175, 2190
BmeRI GACNNNNNGTC 1 cut(s) 438
BmeT110I CYCGRG 1 cut(s) 2089
BmgT120I GGNCC 3 cut(s) 432, 1175, 2190
BmiI GGNNCC 6 cut(s) 434, 993, 1052, 1686, 2139, 2212
BmrFI CCNGG 7 cut(s) 98, 202, 583, 762, 1783, 2117, 2157
BmrI ACTGGG 1 cut(s) 1392
BmsI GCATC 2 cut(s) 1260, 1827
BmtI GCTAGC 1 cut(s) 2202
BmuI ACTGGG 1 cut(s) 1392
BpiI GAAGAC 3 cut(s) 265, 272, 2130
BpmI CTGGAG 2 cut(s) 978, 1307
Bpu14I TTCGAA 1 cut(s) 616
BpuMI CCSGG 1 cut(s) 1783
BsaI GGTCTC 1 cut(s) 591
BsaJI CCNNGG 2 cut(s) 581, 1782
BsaWI WCCGGW 1 cut(s) 589
Bsc4I CCNNNNNNNGG 3 cut(s) 103, 975, 1308
Bse3DI GCAATG 4 cut(s) 294, 709, 980, 2193
BseAI TCCGGA 1 cut(s) 589
BseBI CCWGG 6 cut(s) 98, 202, 583, 762, 2117, 2157
BseDI CCNNGG 2 cut(s) 581, 1782
BseGI GGATG 1 cut(s) 739
BseLI CCNNNNNNNGG 3 cut(s) 103, 975, 1308
BseMI GCAATG 4 cut(s) 294, 709, 980, 2193
BseSI GKGCMC 1 cut(s) 2215
BseXI GCAGC 9 cut(s) 23, 286, 883, 886, 916, 1063, 1191, 1549, 2066
BsgI GTGCAG 1 cut(s) 1452
BshFI GGCC 2 cut(s) 357, 1798
BshNI GGYRCC 1 cut(s) 2210
BsiHKAI GWGCWC 1 cut(s) 793
BsiHKCI CYCGRG 1 cut(s) 2089
BsiSI CCGG 2 cut(s) 590, 1782
BslFI GGGAC 4 cut(s) 34, 1399, 1800, 2053
BslI CCNNNNNNNGG 3 cut(s) 103, 975, 1308
BsmAI GTCTC 4 cut(s) 446, 508, 591, 660
BsmFI GGGAC 4 cut(s) 34, 1399, 1800, 2053
BsmI GAATGC 1 cut(s) 2130
BsnI GGCC 2 cut(s) 357, 1798
Bso31I GGTCTC 1 cut(s) 591
BsoBI CYCGRG 1 cut(s) 2089
Bsp119I TTCGAA 1 cut(s) 616
Bsp1286I GDGCHC 2 cut(s) 793, 2215
Bsp13I TCCGGA 1 cut(s) 589
Bsp143I GATC 9 cut(s) 285, 501, 533, 674, 723, 1050, 1752, 1999, 2137
BspACI CCGC 2 cut(s) 1303, 1514
BspANI GGCC 2 cut(s) 357, 1798
BspEI TCCGGA 1 cut(s) 589
BspHI TCATGA 3 cut(s) 627, 637, 1485
BspLI GGNNCC 6 cut(s) 434, 993, 1052, 1686, 2139, 2212
BspMI ACCTGC 1 cut(s) 1450
BspOI GCTAGC 1 cut(s) 2202
BspPI GGATC 8 cut(s) 293, 509, 541, 1045, 1058, 2007, 2132, 2145
BspT104I TTCGAA 1 cut(s) 616
BspT107I GGYRCC 1 cut(s) 2210
BspTI CTTAAG 1 cut(s) 1181
BspTNI GGTCTC 1 cut(s) 591
BsrDI GCAATG 4 cut(s) 294, 709, 980, 2193
BssECI CCNNGG 2 cut(s) 581, 1782
BssMI GATC 9 cut(s) 285, 501, 533, 674, 723, 1050, 1752, 1999, 2137
Bst2UI CCWGG 6 cut(s) 98, 202, 583, 762, 2117, 2157
Bst6I CTCTTC 2 cut(s) 1554, 2025
BstAFI CTTAAG 1 cut(s) 1181
BstBI TTCGAA 1 cut(s) 616
BstC8I GCNNGC 7 cut(s) 1137, 1202, 1327, 1516, 2052, 2101, 2200
BstEII GGTNACC 1 cut(s) 1214
BstF5I GGATG 1 cut(s) 739
BstKTI GATC 9 cut(s) 288, 504, 536, 677, 726, 1053, 1755, 2002, 2140
BstMAI GTCTC 4 cut(s) 446, 508, 591, 660
BstMBI GATC 9 cut(s) 285, 501, 533, 674, 723, 1050, 1752, 1999, 2137
BstMWI GCNNNNNNNGC 6 cut(s) 1082, 1451, 1466, 1520, 1705, 2219
BstNI CCWGG 6 cut(s) 98, 202, 583, 762, 2117, 2157
BstNSI RCATGY 4 cut(s) 312, 1329, 1527, 2054
BstPI GGTNACC 1 cut(s) 1214
BstSCI CCNGG 7 cut(s) 96, 200, 581, 760, 1781, 2115, 2155
BstSLI GKGCMC 1 cut(s) 2215
BstV1I GCAGC 9 cut(s) 23, 286, 883, 886, 916, 1063, 1191, 1549, 2066
BstV2I GAAGAC 3 cut(s) 265, 272, 2130
BstX2I RGATCY 5 cut(s) 285, 533, 723, 1050, 2137
BstYI RGATCY 5 cut(s) 285, 533, 723, 1050, 2137
BsuI GTATCC 3 cut(s) 377, 1023, 1390
BsuRI GGCC 2 cut(s) 357, 1798
BtsCI GGATG 1 cut(s) 739
BtsI GCAGTG 1 cut(s) 1312
BtsIMutI CAGTG 4 cut(s) 336, 1283, 1312, 1904
BveI ACCTGC 1 cut(s) 1450
Cac8I GCNNGC 7 cut(s) 1137, 1202, 1327, 1516, 2052, 2101, 2200
CaiI CAGNNNCTG 2 cut(s) 694, 1207
CciI TCATGA 3 cut(s) 627, 637, 1485
Cfr13I GGNCC 3 cut(s) 432, 1175, 2190
CseI GACGC 1 cut(s) 1141
Csp6I GTAC 3 cut(s) 451, 670, 1936
CviQI GTAC 3 cut(s) 451, 670, 1936
DpnI GATC 9 cut(s) 287, 503, 535, 676, 725, 1052, 1754, 2001, 2139
DpnII GATC 9 cut(s) 285, 501, 533, 674, 723, 1050, 1752, 1999, 2137
DraI TTTAAA 1 cut(s) 543
DriI GACNNNNNGTC 1 cut(s) 438
EaeI YGGCCR 1 cut(s) 355
Eam1104I CTCTTC 2 cut(s) 1554, 2025
Eam1105I GACNNNNNGTC 1 cut(s) 438
EarI CTCTTC 2 cut(s) 1554, 2025
Eco31I GGTCTC 1 cut(s) 591
Eco47I GGWCC 3 cut(s) 432, 1175, 2190
Eco57I CTGAAG 2 cut(s) 259, 2049
Eco88I CYCGRG 1 cut(s) 2089
Eco91I GGTNACC 1 cut(s) 1214
EcoO109I RGGNCCY 1 cut(s) 1175
EcoO65I GGTNACC 1 cut(s) 1214
EcoRII CCWGG 6 cut(s) 96, 200, 581, 760, 2115, 2155
FalI AAGNNNNNCTT 4 cut(s) 143, 175, 1164, 1196
FaqI GGGAC 4 cut(s) 34, 1399, 1800, 2053
FauI CCCGC 2 cut(s) 1310, 1507
FauNDI CATATG 1 cut(s) 1036
FbaI TGATCA 1 cut(s) 1752
FblI GTMKAC 3 cut(s) 108, 1011, 1942
Fnu4HI GCNGC 9 cut(s) 12, 300, 897, 900, 930, 1077, 1205, 1538, 2055
FokI GGATG 1 cut(s) 746
Fsp4HI GCNGC 9 cut(s) 12, 300, 897, 900, 930, 1077, 1205, 1538, 2055
FspBI CTAG 4 cut(s) 183, 837, 1638, 2199
GluI GCNGC 9 cut(s) 12, 300, 897, 900, 930, 1077, 1205, 1538, 2055
GsuI CTGGAG 2 cut(s) 978, 1307
HaeIII GGCC 2 cut(s) 357, 1798
HapII CCGG 2 cut(s) 590, 1782
HgaI GACGC 1 cut(s) 1141
HincII GTYRAC 1 cut(s) 1943
HindII GTYRAC 1 cut(s) 1943
HpaII CCGG 2 cut(s) 590, 1782
HphI GGTGA 5 cut(s) 617, 650, 991, 1869, 2105
Hpy166II GTNNAC 8 cut(s) 109, 670, 1012, 1529, 1714, 1807, 1896, 1943
Hpy188I TCNGA 7 cut(s) 285, 690, 799, 829, 1568, 1583, 1749
Hpy8I GTNNAC 8 cut(s) 109, 670, 1012, 1529, 1714, 1807, 1896, 1943
Hpy99I CGWCG 1 cut(s) 491
HpyAV CCTTC 4 cut(s) 114, 724, 1166, 2082
HpyCH4IV ACGT 3 cut(s) 453, 461, 486
HpyF10VI GCNNNNNNNGC 6 cut(s) 1082, 1451, 1466, 1520, 1705, 2219
HpySE526I ACGT 3 cut(s) 453, 461, 486
Kpn2I TCCGGA 1 cut(s) 589
Ksp22I TGATCA 1 cut(s) 1752
Kzo9I GATC 9 cut(s) 285, 501, 533, 674, 723, 1050, 1752, 1999, 2137
LmnI GCTCC 2 cut(s) 788, 997
Lsp1109I GCAGC 9 cut(s) 23, 286, 883, 886, 916, 1063, 1191, 1549, 2066
LweI GCATC 2 cut(s) 1260, 1827
MaeI CTAG 4 cut(s) 183, 837, 1638, 2199
MaeII ACGT 3 cut(s) 453, 461, 486
MaeIII GTNAC 6 cut(s) 100, 937, 979, 1111, 1214, 2149
MalI GATC 9 cut(s) 287, 503, 535, 676, 725, 1052, 1754, 2001, 2139
MboI GATC 9 cut(s) 285, 501, 533, 674, 723, 1050, 1752, 1999, 2137
MfeI CAATTG 1 cut(s) 1043
MflI RGATCY 5 cut(s) 285, 533, 723, 1050, 2137
MhlI GDGCHC 2 cut(s) 793, 2215
MlsI TGGCCA 1 cut(s) 357
MluNI TGGCCA 1 cut(s) 357
MlyI GAGTC 4 cut(s) 650, 913, 1635, 2081
MmeI TCCRAC 1 cut(s) 167
Mox20I TGGCCA 1 cut(s) 357
MroI TCCGGA 1 cut(s) 589
MroXI GAANNNNTTC 3 cut(s) 124, 848, 2034
MscI TGGCCA 1 cut(s) 357
MslI CAYNNNNRTG 3 cut(s) 509, 528, 1994
Msp20I TGGCCA 1 cut(s) 357
MspA1I CMGCKG 1 cut(s) 1204
MspCI CTTAAG 1 cut(s) 1181
MspI CCGG 2 cut(s) 590, 1782
MspR9I CCNGG 7 cut(s) 98, 202, 583, 762, 1783, 2117, 2157
MunI CAATTG 1 cut(s) 1043
Mva1269I GAATGC 1 cut(s) 2130
MvaI CCWGG 6 cut(s) 98, 202, 583, 762, 2117, 2157
MwoI GCNNNNNNNGC 6 cut(s) 1082, 1451, 1466, 1520, 1705, 2219
NciI CCSGG 1 cut(s) 1783
NdeI CATATG 1 cut(s) 1036
NdeII GATC 9 cut(s) 285, 501, 533, 674, 723, 1050, 1752, 1999, 2137
NheI GCTAGC 1 cut(s) 2198
NlaIV GGNNCC 6 cut(s) 434, 993, 1052, 1686, 2139, 2212
NmuCI GTSAC 3 cut(s) 979, 1111, 2149
NspI RCATGY 4 cut(s) 312, 1329, 1527, 2054
NspV TTCGAA 1 cut(s) 616
PaeI GCATGC 2 cut(s) 1329, 2054
PaeR7I CTCGAG 1 cut(s) 2089
PagI TCATGA 3 cut(s) 627, 637, 1485
PciI ACATGT 1 cut(s) 308
PcsI WCGNNNNNNNCGW 1 cut(s) 450
PctI GAATGC 1 cut(s) 2130
PdmI GAANNNNTTC 3 cut(s) 124, 848, 2034
PfeI GAWTC 8 cut(s) 4, 596, 608, 800, 811, 824, 1984, 2035
PflMI CCANNNNNTGG 1 cut(s) 975
PkrI GCNGC 9 cut(s) 13, 301, 898, 901, 931, 1078, 1206, 1539, 2056
PleI GAGTC 4 cut(s) 649, 913, 1635, 2081
PpsI GAGTC 4 cut(s) 649, 913, 1635, 2081
PpuMI RGGWCCY 1 cut(s) 1175
PscI ACATGT 1 cut(s) 308
PshBI ATTAAT 3 cut(s) 36, 528, 1413
PsiI TTATAA 1 cut(s) 1196
Psp5II RGGWCCY 1 cut(s) 1175
Psp6I CCWGG 6 cut(s) 96, 200, 581, 760, 2115, 2155
PspEI GGTNACC 1 cut(s) 1214
PspGI CCWGG 6 cut(s) 96, 200, 581, 760, 2115, 2155
PspN4I GGNNCC 6 cut(s) 434, 993, 1052, 1686, 2139, 2212
PspPI GGNCC 3 cut(s) 432, 1175, 2190
PspPPI RGGWCCY 1 cut(s) 1175
PspXI VCTCGAGB 1 cut(s) 2089
PstNI CAGNNNCTG 2 cut(s) 694, 1207
PsuI RGATCY 5 cut(s) 285, 533, 723, 1050, 2137
PvuII CAGCTG 1 cut(s) 1204
RsaI GTAC 3 cut(s) 452, 671, 1937
RsaNI GTAC 3 cut(s) 451, 670, 1936
RseI CAYNNNNRTG 3 cut(s) 509, 528, 1994
SalI GTCGAC 1 cut(s) 1941
SatI GCNGC 9 cut(s) 12, 300, 897, 900, 930, 1077, 1205, 1538, 2055
Sau3AI GATC 9 cut(s) 285, 501, 533, 674, 723, 1050, 1752, 1999, 2137
Sau96I GGNCC 3 cut(s) 432, 1175, 2190
ScaI AGTACT 1 cut(s) 1937
SchI GAGTC 4 cut(s) 650, 913, 1635, 2081
ScrFI CCNGG 7 cut(s) 98, 202, 583, 762, 1783, 2117, 2157
SduI GDGCHC 2 cut(s) 793, 2215
SfaNI GCATC 2 cut(s) 1260, 1827
Sfr274I CTCGAG 1 cut(s) 2089
SfuI TTCGAA 1 cut(s) 616
SinI GGWCC 3 cut(s) 432, 1175, 2190
SlaI CTCGAG 1 cut(s) 2089
SmiMI CAYNNNNRTG 3 cut(s) 509, 528, 1994
SmlI CTYRAG 2 cut(s) 1181, 2089
SmoI CTYRAG 2 cut(s) 1181, 2089
SphI GCATGC 2 cut(s) 1329, 2054
SsiI CCGC 2 cut(s) 1303, 1514
SspI AATATT 1 cut(s) 1695
SspMI CTAG 4 cut(s) 183, 837, 1638, 2199
StyD4I CCNGG 7 cut(s) 96, 200, 581, 760, 1781, 2115, 2155
TaiI ACGT 3 cut(s) 456, 464, 489
TaqI TCGA 7 cut(s) 340, 489, 616, 1422, 1741, 1942, 2090
TatI WGTACW 1 cut(s) 1935
TfiI GAWTC 8 cut(s) 4, 596, 608, 800, 811, 824, 1984, 2035
TscAI CASTG 4 cut(s) 336, 1290, 1312, 1911
TseFI GTSAC 3 cut(s) 979, 1111, 2149
TseI GCWGC 9 cut(s) 11, 299, 896, 899, 929, 1076, 1204, 1537, 2054
Tsp45I GTSAC 3 cut(s) 979, 1111, 2149
TspGWI ACGGA 2 cut(s) 724, 1043
TspRI CASTG 4 cut(s) 336, 1290, 1312, 1911
Van91I CCANNNNNTGG 1 cut(s) 975
Vha464I CTTAAG 1 cut(s) 1181
VpaK11BI GGWCC 3 cut(s) 432, 1175, 2190
VspI ATTAAT 3 cut(s) 36, 528, 1413
XapI RAATTY 4 cut(s) 620, 1190, 1478, 1632
XceI RCATGY 4 cut(s) 312, 1329, 1527, 2054
XhoI CTCGAG 1 cut(s) 2089
XmiI GTMKAC 3 cut(s) 108, 1011, 1942
XmnI GAANNNNTTC 3 cut(s) 124, 848, 2034
XspI CTAG 4 cut(s) 183, 837, 1638, 2199
ZrmI AGTACT 1 cut(s) 1937
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.