Phosphatidylinositol phosphate kinases
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10900 AT1G10900 AT1G10900 AT1G60890 AT1G60890 |
| fragaria_vesca | FvH4_5g29440 FvH4_5g29440 FvH4_5g29440 FvH4_5g29440 FvH4_5g29440 FvH4_5g29440 FvH4_5g29440 FvH4_5g29440 FvH4_5g29440 FvH4_5g29440 FvH4_5g29440 FvH4_5g29440 |
| malus_domestica | MD08G1229900.v1.1 MD08G1230300.v1.1 MD15G1423400.v1.1 |
| prunus_persica | Prupe.1G569300_v2.0.a1 Prupe.1G569300_v2.0.a1 Prupe.1G569300_v2.0.a1 Prupe.1G569300_v2.0.a1 Prupe.1G569300_v2.0.a1 Prupe.1G569300_v2.0.a1 Prupe.1G569300_v2.0.a1 Prupe.1G569300_v2.0.a1 Prupe.1G569300_v2.0.a1 |
| pyrus_communis | pycom08g20000 pycom08g20030 pycom15g37540 |
| rosa_chinensis | RchiOBHm_Chr7g0222421 |
| rosa_laevigata | RLG00000002062 |
| rosa_multiflora | Rmu_sc0008769.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00236990 |
| rosa_rugosa | Rorug07G0208300 Rorug07G0208400 |
| rosa_samantha | Rh7CG368000 Rh7DG347200 |
| rosa_wichuraiana | Rw7G029590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 507, 1427 |
| Acc36I | ACCTGC | 1 cut(s) | 1354 |
| Acc65I | GGTACC | 1 cut(s) | 536 |
| AccB1I | GGYRCC | 2 cut(s) | 224, 536 |
| AccI | GTMKAC | 4 cut(s) | 252, 1034, 1161, 2082 |
| AciI | CCGC | 2 cut(s) | 258, 1990 |
| AclWI | GGATC | 2 cut(s) | 749, 2171 |
| AcoI | YGGCCR | 1 cut(s) | 1750 |
| AcsI | RAATTY | 6 cut(s) | 26, 1201, 1275, 1433, 1625, 1668 |
| AcuI | CTGAAG | 2 cut(s) | 717, 1794 |
| AdeI | CACNNNGTG | 1 cut(s) | 2245 |
| AfaI | GTAC | 8 cut(s) | 392, 538, 654, 1238, 1391, 1479, 1995, 2099 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 826, 912, 981, 1127, 1464, 1465, 1853 |
| AflIII | ACRYGT | 2 cut(s) | 773, 1399 |
| AgsI | TTSAA | 8 cut(s) | 478, 629, 1219, 1519, 1551, 1603, 1663, 2078 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 714 |
| AjnI | CCWGG | 5 cut(s) | 263, 539, 1169, 1747, 1972 |
| Alw21I | GWGCWC | 2 cut(s) | 1747, 1925 |
| Alw26I | GTCTC | 2 cut(s) | 759, 1119 |
| AlwI | GGATC | 2 cut(s) | 749, 2171 |
| Ama87I | CYCGRG | 2 cut(s) | 546, 1286 |
| AoxI | GGCC | 5 cut(s) | 550, 782, 817, 1264, 1750 |
| ApeKI | GCWGC | 2 cut(s) | 1229, 1987 |
| ApoI | RAATTY | 6 cut(s) | 26, 1201, 1275, 1433, 1625, 1668 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1313, 1345, 1772, 1804 |
| Asp718I | GGTACC | 1 cut(s) | 536 |
| AspS9I | GGNCC | 4 cut(s) | 375, 543, 782, 1904 |
| AsuC2I | CCSGG | 3 cut(s) | 1287, 1288, 1902 |
| AsuHPI | GGTGA | 6 cut(s) | 50, 134, 228, 464, 752, 1268 |
| AvaI | CYCGRG | 2 cut(s) | 546, 1286 |
| AvaII | GGWCC | 3 cut(s) | 375, 543, 1904 |
| BalI | TGGCCA | 1 cut(s) | 1752 |
| BanI | GGYRCC | 2 cut(s) | 224, 536 |
| BanII | GRGCYC | 1 cut(s) | 1747 |
| BbsI | GAAGAC | 1 cut(s) | 1598 |
| Bbv12I | GWGCWC | 2 cut(s) | 1747, 1925 |
| BbvI | GCAGC | 2 cut(s) | 1216, 1974 |
| BccI | CCATC | 5 cut(s) | 98, 435, 512, 607, 1256 |
| BceAI | ACGGC | 1 cut(s) | 1144 |
| BciT130I | CCWGG | 5 cut(s) | 265, 541, 1171, 1749, 1974 |
| BciVI | GTATCC | 1 cut(s) | 200 |
| BclI | TGATCA | 1 cut(s) | 1335 |
| BcnI | CCSGG | 3 cut(s) | 1287, 1288, 1902 |
| BcoDI | GTCTC | 2 cut(s) | 759, 1119 |
| BfaI | CTAG | 4 cut(s) | 960, 1101, 1122, 1616 |
| BfmI | CTRYAG | 4 cut(s) | 253, 1038, 1230, 1714 |
| BfuAI | ACCTGC | 1 cut(s) | 1354 |
| BfuI | GTATCC | 1 cut(s) | 200 |
| BglII | AGATCT | 2 cut(s) | 316, 1606 |
| BisI | GCNGC | 2 cut(s) | 1230, 1988 |
| BlsI | GCNGC | 2 cut(s) | 1231, 1989 |
| BmcAI | AGTACT | 1 cut(s) | 1391 |
| Bme1390I | CCNGG | 8 cut(s) | 265, 541, 1171, 1287, 1288, 1749, 1902, 1974 |
| Bme18I | GGWCC | 3 cut(s) | 375, 543, 1904 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 714 |
| BmeT110I | CYCGRG | 2 cut(s) | 546, 1286 |
| BmgT120I | GGNCC | 4 cut(s) | 375, 543, 782, 1904 |
| BmiI | GGNNCC | 6 cut(s) | 226, 262, 538, 545, 1132, 1905 |
| BmrFI | CCNGG | 8 cut(s) | 265, 541, 1171, 1287, 1288, 1749, 1902, 1974 |
| BmrI | ACTGGG | 1 cut(s) | 1736 |
| BmsI | GCATC | 2 cut(s) | 677, 1216 |
| BmuI | ACTGGG | 1 cut(s) | 1736 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1182, 1716 |
| BpiI | GAAGAC | 1 cut(s) | 1598 |
| BpmI | CTGGAG | 4 cut(s) | 36, 195, 286, 519 |
| Bpu10I | CCTNAGC | 2 cut(s) | 689, 814 |
| BpuEI | CTTGAG | 3 cut(s) | 1445, 1539, 1790 |
| BpuMI | CCSGG | 3 cut(s) | 1287, 1288, 1902 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1580, 1611 |
| BsaJI | CCNNGG | 5 cut(s) | 547, 1061, 1188, 1285, 1286 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 826, 912, 981, 1127, 1464, 1465, 1853 |
| Bse118I | RCCGGY | 1 cut(s) | 2014 |
| Bse1I | ACTGG | 5 cut(s) | 407, 646, 785, 1055, 1731 |
| Bse3DI | GCAATG | 1 cut(s) | 1791 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1580, 1611 |
| BseBI | CCWGG | 5 cut(s) | 265, 541, 1171, 1749, 1974 |
| BseDI | CCNNGG | 5 cut(s) | 547, 1061, 1188, 1285, 1286 |
| BseGI | GGATG | 2 cut(s) | 136, 527 |
| BseJI | GATNNNNATC | 2 cut(s) | 1580, 1611 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 826, 912, 981, 1127, 1464, 1465, 1853 |
| BseMI | GCAATG | 1 cut(s) | 1791 |
| BseMII | CTCAG | 6 cut(s) | 327, 828, 1347, 1387, 1844, 1942 |
| BseNI | ACTGG | 5 cut(s) | 407, 646, 785, 1055, 1731 |
| BseRI | GAGGAG | 2 cut(s) | 444, 698 |
| BseXI | GCAGC | 2 cut(s) | 1216, 1974 |
| BsgI | GTGCAG | 2 cut(s) | 783, 1881 |
| BshFI | GGCC | 5 cut(s) | 552, 784, 819, 1266, 1752 |
| BshNI | GGYRCC | 2 cut(s) | 224, 536 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1747, 1925 |
| BsiHKCI | CYCGRG | 2 cut(s) | 546, 1286 |
| BsiSI | CCGG | 3 cut(s) | 1287, 1901, 2015 |
| BslFI | GGGAC | 3 cut(s) | 529, 843, 1170 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 826, 912, 981, 1127, 1464, 1465, 1853 |
| BsmAI | GTCTC | 2 cut(s) | 759, 1119 |
| BsmBI | CGTCTC | 1 cut(s) | 1119 |
| BsmFI | GGGAC | 3 cut(s) | 529, 843, 1170 |
| BsnI | GGCC | 5 cut(s) | 552, 784, 819, 1266, 1752 |
| BsoBI | CYCGRG | 2 cut(s) | 546, 1286 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1747, 1925 |
| Bsp1407I | TGTACA | 1 cut(s) | 2097 |
| Bsp19I | CCATGG | 1 cut(s) | 1188 |
| BspACI | CCGC | 2 cut(s) | 258, 1990 |
| BspANI | GGCC | 5 cut(s) | 552, 784, 819, 1266, 1752 |
| BspCNI | CTCAG | 6 cut(s) | 326, 827, 1348, 1386, 1843, 1941 |
| BspHI | TCATGA | 2 cut(s) | 1318, 1873 |
| BspLI | GGNNCC | 6 cut(s) | 226, 262, 538, 545, 1132, 1905 |
| BspMAI | CTGCAG | 1 cut(s) | 1234 |
| BspMI | ACCTGC | 1 cut(s) | 1354 |
| BspPI | GGATC | 2 cut(s) | 749, 2171 |
| BspT107I | GGYRCC | 2 cut(s) | 224, 536 |
| BsrDI | GCAATG | 1 cut(s) | 1791 |
| BsrFI | RCCGGY | 1 cut(s) | 2014 |
| BsrGI | TGTACA | 1 cut(s) | 2097 |
| BsrI | ACTGG | 5 cut(s) | 407, 646, 785, 1055, 1731 |
| BssAI | RCCGGY | 1 cut(s) | 2014 |
| BssECI | CCNNGG | 5 cut(s) | 547, 1061, 1188, 1285, 1286 |
| BssNAI | GTATAC | 2 cut(s) | 1035, 2083 |
| BssT1I | CCWWGG | 1 cut(s) | 1188 |
| Bst1107I | GTATAC | 2 cut(s) | 1035, 2083 |
| Bst2UI | CCWGG | 5 cut(s) | 265, 541, 1171, 1749, 1974 |
| Bst4CI | ACNGT | 8 cut(s) | 329, 452, 467, 706, 804, 845, 1039, 1718 |
| Bst6I | CTCTTC | 1 cut(s) | 2046 |
| BstAUI | TGTACA | 1 cut(s) | 2097 |
| BstC8I | GCNNGC | 3 cut(s) | 1077, 1949, 2016 |
| BstDSI | CCRYGG | 1 cut(s) | 1188 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 979, 1851 |
| BstF5I | GGATG | 2 cut(s) | 136, 527 |
| BstMAI | GTCTC | 2 cut(s) | 759, 1119 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1072 |
| BstNI | CCWGG | 5 cut(s) | 265, 541, 1171, 1749, 1974 |
| BstNSI | RCATGY | 4 cut(s) | 777, 871, 1403, 2014 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1182, 1716 |
| BstSCI | CCNGG | 8 cut(s) | 263, 539, 1169, 1285, 1286, 1747, 1900, 1972 |
| BstSFI | CTRYAG | 4 cut(s) | 253, 1038, 1230, 1714 |
| BstV1I | GCAGC | 2 cut(s) | 1216, 1974 |
| BstV2I | GAAGAC | 1 cut(s) | 1598 |
| BstX2I | RGATCY | 2 cut(s) | 316, 1606 |
| BstYI | RGATCY | 2 cut(s) | 316, 1606 |
| BstZ17I | GTATAC | 2 cut(s) | 1035, 2083 |
| BsuI | GTATCC | 1 cut(s) | 200 |
| BsuRI | GGCC | 5 cut(s) | 552, 784, 819, 1266, 1752 |
| BtgI | CCRYGG | 1 cut(s) | 1188 |
| BtsCI | GGATG | 2 cut(s) | 136, 527 |
| BtsI | GCAGTG | 1 cut(s) | 670 |
| BtsIMutI | CAGTG | 4 cut(s) | 639, 670, 702, 1062 |
| BveI | ACCTGC | 1 cut(s) | 1354 |
| Cac8I | GCNNGC | 3 cut(s) | 1077, 1949, 2016 |
| CciI | TCATGA | 2 cut(s) | 1318, 1873 |
| Cfr10I | RCCGGY | 1 cut(s) | 2014 |
| Cfr13I | GGNCC | 4 cut(s) | 375, 543, 782, 1904 |
| Cfr9I | CCCGGG | 1 cut(s) | 1286 |
| CsiI | ACCWGGT | 1 cut(s) | 539 |
| Csp6I | GTAC | 8 cut(s) | 391, 537, 653, 1237, 1390, 1478, 1994, 2098 |
| CviQI | GTAC | 8 cut(s) | 391, 537, 653, 1237, 1390, 1478, 1994, 2098 |
| DraI | TTTAAA | 2 cut(s) | 699, 1347 |
| DraIII | CACNNNGTG | 1 cut(s) | 2245 |
| DriI | GACNNNNNGTC | 1 cut(s) | 714 |
| EaeI | YGGCCR | 1 cut(s) | 1750 |
| Eam1104I | CTCTTC | 1 cut(s) | 2046 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 714 |
| EarI | CTCTTC | 1 cut(s) | 2046 |
| Ecl136II | GAGCTC | 1 cut(s) | 1745 |
| Eco130I | CCWWGG | 1 cut(s) | 1188 |
| Eco147I | AGGCCT | 1 cut(s) | 552 |
| Eco24I | GRGCYC | 1 cut(s) | 1747 |
| Eco32I | GATATC | 1 cut(s) | 1765 |
| Eco47I | GGWCC | 3 cut(s) | 375, 543, 1904 |
| Eco53kI | GAGCTC | 1 cut(s) | 1745 |
| Eco57I | CTGAAG | 2 cut(s) | 717, 1794 |
| Eco88I | CYCGRG | 2 cut(s) | 546, 1286 |
| EcoICRI | GAGCTC | 1 cut(s) | 1745 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 979, 1851 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1904 |
| EcoRI | GAATTC | 1 cut(s) | 26 |
| EcoRII | CCWGG | 5 cut(s) | 263, 539, 1169, 1747, 1972 |
| EcoRV | GATATC | 1 cut(s) | 1765 |
| EcoT14I | CCWWGG | 1 cut(s) | 1188 |
| EcoT22I | ATGCAT | 1 cut(s) | 97 |
| EcoT38I | GRGCYC | 1 cut(s) | 1747 |
| ErhI | CCWWGG | 1 cut(s) | 1188 |
| Esp3I | CGTCTC | 1 cut(s) | 1119 |
| FaqI | GGGAC | 3 cut(s) | 529, 843, 1170 |
| FauI | CCCGC | 1 cut(s) | 1983 |
| FauNDI | CATATG | 1 cut(s) | 1632 |
| FbaI | TGATCA | 1 cut(s) | 1335 |
| FblI | GTMKAC | 4 cut(s) | 252, 1034, 1161, 2082 |
| Fnu4HI | GCNGC | 2 cut(s) | 1230, 1988 |
| FokI | GGATG | 2 cut(s) | 143, 534 |
| FriOI | GRGCYC | 1 cut(s) | 1747 |
| Fsp4HI | GCNGC | 2 cut(s) | 1230, 1988 |
| FspBI | CTAG | 4 cut(s) | 960, 1101, 1122, 1616 |
| GluI | GCNGC | 2 cut(s) | 1230, 1988 |
| GsuI | CTGGAG | 4 cut(s) | 36, 195, 286, 519 |
| HaeIII | GGCC | 5 cut(s) | 552, 784, 819, 1266, 1752 |
| HapII | CCGG | 3 cut(s) | 1287, 1901, 2015 |
| HincII | GTYRAC | 2 cut(s) | 910, 1162 |
| HindII | GTYRAC | 2 cut(s) | 910, 1162 |
| HindIII | AAGCTT | 2 cut(s) | 158, 2033 |
| HinfI | GANTC | 7 cut(s) | 245, 570, 1522, 1694, 1828, 2054, 2106 |
| HpaII | CCGG | 3 cut(s) | 1287, 1901, 2015 |
| HphI | GGTGA | 6 cut(s) | 50, 134, 228, 464, 752, 1268 |
| Hpy166II | GTNNAC | 8 cut(s) | 253, 910, 1035, 1162, 1447, 2008, 2083, 2098 |
| Hpy188I | TCNGA | 9 cut(s) | 103, 316, 1084, 1357, 1376, 1792, 1916, 1931, 2181 |
| Hpy8I | GTNNAC | 8 cut(s) | 253, 910, 1035, 1162, 1447, 2008, 2083, 2098 |
| Hpy99I | CGWCG | 1 cut(s) | 1533 |
| HpyAV | CCTTC | 6 cut(s) | 76, 128, 221, 335, 559, 2214 |
| HpyCH4III | ACNGT | 8 cut(s) | 329, 452, 467, 706, 804, 845, 1039, 1718 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1072 |
| KpnI | GGTACC | 1 cut(s) | 540 |
| KroI | GCCGGC | 1 cut(s) | 2014 |
| KroNI | GCCGGC | 1 cut(s) | 2016 |
| Ksp22I | TGATCA | 1 cut(s) | 1335 |
| LmnI | GCTCC | 6 cut(s) | 176, 260, 685, 1136, 1750, 1920 |
| Lsp1109I | GCAGC | 2 cut(s) | 1216, 1974 |
| LweI | GCATC | 2 cut(s) | 677, 1216 |
| MabI | ACCWGGT | 1 cut(s) | 539 |
| MaeI | CTAG | 4 cut(s) | 960, 1101, 1122, 1616 |
| MaeIII | GTNAC | 6 cut(s) | 308, 706, 915, 1644, 1867, 2194 |
| MboII | GAAGA | 9 cut(s) | 1108, 1272, 1297, 1531, 1603, 1800, 1961, 2063, 2152 |
| MfeI | CAATTG | 1 cut(s) | 2064 |
| MflI | RGATCY | 2 cut(s) | 316, 1606 |
| MhlI | GDGCHC | 2 cut(s) | 1747, 1925 |
| MlsI | TGGCCA | 1 cut(s) | 1752 |
| MluNI | TGGCCA | 1 cut(s) | 1752 |
| MlyI | GAGTC | 4 cut(s) | 254, 579, 1822, 2063 |
| MmeI | TCCRAC | 1 cut(s) | 1042 |
| Mox20I | TGGCCA | 1 cut(s) | 1752 |
| Mph1103I | ATGCAT | 1 cut(s) | 97 |
| MroNI | GCCGGC | 1 cut(s) | 2014 |
| MscI | TGGCCA | 1 cut(s) | 1752 |
| MseI | TTAA | 7 cut(s) | 698, 927, 968, 1004, 1205, 1346, 1758 |
| Msp20I | TGGCCA | 1 cut(s) | 1752 |
| MspA1I | CMGCKG | 2 cut(s) | 258, 737 |
| MspI | CCGG | 3 cut(s) | 1287, 1901, 2015 |
| MspR9I | CCNGG | 8 cut(s) | 265, 541, 1171, 1287, 1288, 1749, 1902, 1974 |
| MssI | GTTTAAAC | 1 cut(s) | 699 |
| MunI | CAATTG | 1 cut(s) | 2064 |
| MvaI | CCWGG | 5 cut(s) | 265, 541, 1171, 1749, 1974 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1072 |
| NaeI | GCCGGC | 1 cut(s) | 2016 |
| NciI | CCSGG | 3 cut(s) | 1287, 1288, 1902 |
| NcoI | CCATGG | 1 cut(s) | 1188 |
| NdeI | CATATG | 1 cut(s) | 1632 |
| NgoMIV | GCCGGC | 1 cut(s) | 2014 |
| NlaIV | GGNNCC | 6 cut(s) | 226, 262, 538, 545, 1132, 1905 |
| NmeAIII | GCCGAG | 1 cut(s) | 1086 |
| NmuCI | GTSAC | 3 cut(s) | 706, 915, 2194 |
| NsiI | ATGCAT | 1 cut(s) | 97 |
| NspI | RCATGY | 4 cut(s) | 777, 871, 1403, 2014 |
| PagI | TCATGA | 2 cut(s) | 1318, 1873 |
| PceI | AGGCCT | 1 cut(s) | 552 |
| PciI | ACATGT | 2 cut(s) | 773, 1399 |
| PdiI | GCCGGC | 1 cut(s) | 2016 |
| PfeI | GAWTC | 3 cut(s) | 1522, 1694, 2106 |
| PfoI | TCCNGGA | 2 cut(s) | 1169, 1972 |
| PkrI | GCNGC | 2 cut(s) | 1231, 1989 |
| PleI | GAGTC | 4 cut(s) | 253, 578, 1822, 2062 |
| PmeI | GTTTAAAC | 1 cut(s) | 699 |
| PpsI | GAGTC | 4 cut(s) | 253, 578, 1822, 2062 |
| PpuMI | RGGWCCY | 1 cut(s) | 1904 |
| PscI | ACATGT | 2 cut(s) | 773, 1399 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1182, 1716 |
| PsiI | TTATAA | 2 cut(s) | 507, 1427 |
| Psp124BI | GAGCTC | 1 cut(s) | 1747 |
| Psp5II | RGGWCCY | 1 cut(s) | 1904 |
| Psp6I | CCWGG | 5 cut(s) | 263, 539, 1169, 1747, 1972 |
| PspGI | CCWGG | 5 cut(s) | 263, 539, 1169, 1747, 1972 |
| PspN4I | GGNNCC | 6 cut(s) | 226, 262, 538, 545, 1132, 1905 |
| PspPI | GGNCC | 4 cut(s) | 375, 543, 782, 1904 |
| PspPPI | RGGWCCY | 1 cut(s) | 1904 |
| PstI | CTGCAG | 1 cut(s) | 1234 |
| PsuI | RGATCY | 2 cut(s) | 316, 1606 |
| PvuII | CAGCTG | 1 cut(s) | 737 |
| RsaI | GTAC | 8 cut(s) | 392, 538, 654, 1238, 1391, 1479, 1995, 2099 |
| RsaNI | GTAC | 8 cut(s) | 391, 537, 653, 1237, 1390, 1478, 1994, 2098 |
| SacI | GAGCTC | 1 cut(s) | 1747 |
| SalI | GTCGAC | 1 cut(s) | 1160 |
| SaqAI | TTAA | 7 cut(s) | 698, 927, 968, 1004, 1205, 1346, 1758 |
| SatI | GCNGC | 2 cut(s) | 1230, 1988 |
| Sau96I | GGNCC | 4 cut(s) | 375, 543, 782, 1904 |
| ScaI | AGTACT | 1 cut(s) | 1391 |
| SchI | GAGTC | 4 cut(s) | 254, 579, 1822, 2063 |
| ScrFI | CCNGG | 8 cut(s) | 265, 541, 1171, 1287, 1288, 1749, 1902, 1974 |
| SduI | GDGCHC | 2 cut(s) | 1747, 1925 |
| SexAI | ACCWGGT | 1 cut(s) | 539 |
| SfaNI | GCATC | 2 cut(s) | 677, 1216 |
| SfcI | CTRYAG | 4 cut(s) | 253, 1038, 1230, 1714 |
| SinI | GGWCC | 3 cut(s) | 375, 543, 1904 |
| SmaI | CCCGGG | 1 cut(s) | 1288 |
| SmlI | CTYRAG | 3 cut(s) | 1460, 1554, 1769 |
| SmoI | CTYRAG | 3 cut(s) | 1460, 1554, 1769 |
| SseBI | AGGCCT | 1 cut(s) | 552 |
| SsiI | CCGC | 2 cut(s) | 258, 1990 |
| SspMI | CTAG | 4 cut(s) | 960, 1101, 1122, 1616 |
| SstI | GAGCTC | 1 cut(s) | 1747 |
| StuI | AGGCCT | 1 cut(s) | 552 |
| StyD4I | CCNGG | 8 cut(s) | 263, 539, 1169, 1285, 1286, 1747, 1900, 1972 |
| StyI | CCWWGG | 1 cut(s) | 1188 |
| TaaI | ACNGT | 8 cut(s) | 329, 452, 467, 706, 804, 845, 1039, 1718 |
| TaqI | TCGA | 1 cut(s) | 1161 |
| TaqII | GACCGA | 1 cut(s) | 2213 |
| TatI | WGTACW | 4 cut(s) | 652, 1236, 1389, 2097 |
| TfiI | GAWTC | 3 cut(s) | 1522, 1694, 2106 |
| Tru1I | TTAA | 7 cut(s) | 698, 927, 968, 1004, 1205, 1346, 1758 |
| Tru9I | TTAA | 7 cut(s) | 698, 927, 968, 1004, 1205, 1346, 1758 |
| TscAI | CASTG | 4 cut(s) | 646, 670, 709, 1062 |
| TseFI | GTSAC | 3 cut(s) | 706, 915, 2194 |
| TseI | GCWGC | 2 cut(s) | 1229, 1987 |
| Tsp45I | GTSAC | 3 cut(s) | 706, 915, 2194 |
| TspGWI | ACGGA | 3 cut(s) | 895, 1876, 1930 |
| TspMI | CCCGGG | 1 cut(s) | 1286 |
| TspRI | CASTG | 4 cut(s) | 646, 670, 709, 1062 |
| VpaK11BI | GGWCC | 3 cut(s) | 375, 543, 1904 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 979, 1851 |
| XapI | RAATTY | 6 cut(s) | 26, 1201, 1275, 1433, 1625, 1668 |
| XceI | RCATGY | 4 cut(s) | 777, 871, 1403, 2014 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2143 |
| XmaI | CCCGGG | 1 cut(s) | 1286 |
| XmiI | GTMKAC | 4 cut(s) | 252, 1034, 1161, 2082 |
| XspI | CTAG | 4 cut(s) | 960, 1101, 1122, 1616 |
| ZrmI | AGTACT | 1 cut(s) | 1391 |
| Zsp2I | ATGCAT | 1 cut(s) | 97 |