Rh7DG347200

phosphatidylinositol 4-phosphate 5-kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0002499
Physical Location & Seq
Forward (+)
45957923 .. 45960651
2729 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG347200.1

Sequence Viewer

Length: 954 bp
ATGAAAGTCTGGCATGTTGAGATGACTTACATTTTTTTCTTTCTTATAAAGGTTCTGCTCAGGATGCTGCCTAGCTATTATTCCCATGTAGGAGAACATGAAAACACTCTCATAACAAAGTTTTTTGGGCTCCATAGGATAACATTAAAAACTCGAAGAAAGGTACGCTTTGTGGTCATGGGGAATATGTTTTGCACTGAATTACGAATTCATCGCCGTTTTGATTTGAAGGGTTCAACTCTTGGAAGATGCACGGATCCAGATAAGATAAAAGAAAATACCACATTGAAAGATCTTGATCTGCCATTTGAATTTCATATGGACAAATTATTGCGAGAGGCCCTTTTTAAACAAATATCACTGGACTGCAAGTTCTTAGAATCTCAGCATATAATTGATTATAGCCTTCTGTTGGGACTACATTTTAGAGCTCCTGAGAATCTCAAGGCATTTTCACAACCTCCTGATACAGTTCAAAATCATGATAGTTTACCTACAGGTGATGGTGTGACTGCAGGAGGGCTTTCAATTCCTCCTAAAGGTCTTGTACTGGTAACCCATGAACCTGGCTCTGTGAGTACTGCTCCTGGTCCTCATATCAGAGGAAGTACGTTGAAAGCATATTCTCTTGGTGACAAAGAAGTTGATCTTTTACTGCCTGGTACTGGAAGGTTGAGAGTGCAATTGGGAGTAAACATGCCAGCTCAGGCCAATCATAAGCTTCCGCAGGATGAGGCTGATTCAACAGACGTAGAACTGTTTGAATTTTATGATGTGGTCCTGTATATGGGCATAATTGATATATTGCAGGAATACAATGTGAAAAAGAAAGTTGAGCACGCATACAAATCATTGCGGTTTGATCCTCTAACCATTTCTGCTGTTGAACCCACGCTGTATGCTAAACGTTTCATCAATTTCTTGGAGAAAGTTTTCCCTAACATAGCAATATAG

Protein Analysis

317

Amino Acids

36.19

Weight (kDa)

8.29

Isoelectric Point (pI)

38.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PIP5K PF01504 17 - 310 1.1e-77 Phosphatidylinositol-4-phosphate 5-Kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 47
AciI CCGC 2 cut(s) 725, 856
AclI AACGTT 1 cut(s) 907
AclWI GGATC 3 cut(s) 251, 264, 857
AcsI RAATTY 3 cut(s) 207, 311, 764
AfaI GTAC 5 cut(s) 165, 549, 580, 610, 664
AfiI CCNNNNNNNGG 4 cut(s) 412, 539, 665, 787
AjnI CCWGG 3 cut(s) 565, 586, 658
AloI GAACNNNNNNTCC 2 cut(s) 356, 388
AluBI AGCT 4 cut(s) 75, 431, 704, 721
AluI AGCT 4 cut(s) 75, 431, 704, 721
Alw21I GWGCWC 2 cut(s) 433, 840
AlwI GGATC 3 cut(s) 251, 264, 857
AoxI GGCC 2 cut(s) 339, 708
ApeKI GCWGC 1 cut(s) 67
ApoI RAATTY 3 cut(s) 207, 311, 764
Asp700I GAANNNNTTC 1 cut(s) 932
AspS9I GGNCC 3 cut(s) 340, 590, 778
AsuHPI GGTGA 2 cut(s) 512, 644
AvaII GGWCC 2 cut(s) 590, 778
BamHI GGATCC 1 cut(s) 256
BanII GRGCYC 2 cut(s) 132, 433
Bbv12I GWGCWC 2 cut(s) 433, 840
BbvI GCAGC 1 cut(s) 54
BccI CCATC 1 cut(s) 497
BceAI ACGGC 1 cut(s) 201
BciT130I CCWGG 3 cut(s) 567, 588, 660
BfaI CTAG 1 cut(s) 72
BfmI CTRYAG 2 cut(s) 495, 513
BglII AGATCT 1 cut(s) 292
BisI GCNGC 1 cut(s) 68
BlsI GCNGC 1 cut(s) 69
BmcAI AGTACT 1 cut(s) 580
Bme1390I CCNGG 3 cut(s) 567, 588, 660
Bme18I GGWCC 2 cut(s) 590, 778
BmgT120I GGNCC 3 cut(s) 340, 590, 778
BmiI GGNNCC 2 cut(s) 131, 258
BmrFI CCNGG 3 cut(s) 567, 588, 660
BmsI GCATC 2 cut(s) 54, 239
BplI GAGNNNNNCTC 2 cut(s) 568, 600
Bpu10I CCTNAGC 2 cut(s) 59, 705
BpuEI CTTGAG 1 cut(s) 428
BsaBI GATNNNNATC 1 cut(s) 297
Bsc4I CCNNNNNNNGG 4 cut(s) 412, 539, 665, 787
Bse1I ACTGG 3 cut(s) 366, 555, 670
Bse3DI GCAATG 1 cut(s) 851
Bse8I GATNNNNATC 1 cut(s) 297
BseBI CCWGG 3 cut(s) 567, 588, 660
BseGI GGATG 2 cut(s) 69, 736
BseJI GATNNNNATC 1 cut(s) 297
BseLI CCNNNNNNNGG 4 cut(s) 412, 539, 665, 787
BseMI GCAATG 1 cut(s) 851
BseMII CTCAG 4 cut(s) 73, 398, 426, 719
BseNI ACTGG 3 cut(s) 366, 555, 670
BseXI GCAGC 1 cut(s) 54
BshFI GGCC 2 cut(s) 341, 710
BsiHKAI GWGCWC 2 cut(s) 433, 840
BslFI GGGAC 1 cut(s) 429
BslI CCNNNNNNNGG 4 cut(s) 412, 539, 665, 787
BsmFI GGGAC 1 cut(s) 429
BsnI GGCC 2 cut(s) 341, 710
Bsp1286I GDGCHC 3 cut(s) 132, 433, 840
Bsp143I GATC 5 cut(s) 256, 292, 298, 646, 862
BspACI CCGC 2 cut(s) 725, 856
BspANI GGCC 2 cut(s) 341, 710
BspCNI CTCAG 4 cut(s) 72, 397, 427, 718
BspHI TCATGA 1 cut(s) 481
BspLI GGNNCC 2 cut(s) 131, 258
BspMAI CTGCAG 1 cut(s) 517
BspPI GGATC 3 cut(s) 251, 264, 857
BsrDI GCAATG 1 cut(s) 851
BsrI ACTGG 3 cut(s) 366, 555, 670
BssMI GATC 5 cut(s) 256, 292, 298, 646, 862
Bst2UI CCWGG 3 cut(s) 567, 588, 660
Bst4CI ACNGT 2 cut(s) 472, 759
BstC8I GCNNGC 2 cut(s) 702, 840
BstDEI CTNAG 5 cut(s) 59, 376, 384, 435, 705
BstEII GGTNACC 1 cut(s) 553
BstENI CCTNNNNNAGG 1 cut(s) 537
BstF5I GGATG 2 cut(s) 69, 736
BstKTI GATC 5 cut(s) 259, 295, 301, 649, 865
BstMBI GATC 5 cut(s) 256, 292, 298, 646, 862
BstMWI GCNNNNNNNGC 1 cut(s) 64
BstNI CCWGG 3 cut(s) 567, 588, 660
BstNSI RCATGY 2 cut(s) 17, 700
BstPI GGTNACC 1 cut(s) 553
BstSCI CCNGG 3 cut(s) 565, 586, 658
BstSFI CTRYAG 2 cut(s) 495, 513
BstV1I GCAGC 1 cut(s) 54
BstX2I RGATCY 2 cut(s) 256, 292
BstXI CCANNNNNNTGG 1 cut(s) 566
BstYI RGATCY 2 cut(s) 256, 292
BsuRI GGCC 2 cut(s) 341, 710
BtgZI GCGATG 1 cut(s) 197
BtsCI GGATG 2 cut(s) 69, 736
BtsIMutI CAGTG 2 cut(s) 195, 359
Cac8I GCNNGC 2 cut(s) 702, 840
CciI TCATGA 1 cut(s) 481
Cfr13I GGNCC 3 cut(s) 340, 590, 778
Csp6I GTAC 5 cut(s) 164, 548, 579, 609, 663
CviAII CATG 7 cut(s) 14, 86, 98, 178, 482, 560, 697
CviQI GTAC 5 cut(s) 164, 548, 579, 609, 663
DdeI CTNAG 5 cut(s) 59, 376, 384, 435, 705
DpnI GATC 5 cut(s) 258, 294, 300, 648, 864
DpnII GATC 5 cut(s) 256, 292, 298, 646, 862
DraI TTTAAA 1 cut(s) 349
Ecl136II GAGCTC 1 cut(s) 431
Eco24I GRGCYC 2 cut(s) 132, 433
Eco47I GGWCC 2 cut(s) 590, 778
Eco53kI GAGCTC 1 cut(s) 431
Eco91I GGTNACC 1 cut(s) 553
EcoICRI GAGCTC 1 cut(s) 431
EcoNI CCTNNNNNAGG 1 cut(s) 537
EcoO109I RGGNCCY 1 cut(s) 340
EcoO65I GGTNACC 1 cut(s) 553
EcoRI GAATTC 1 cut(s) 207
EcoRII CCWGG 3 cut(s) 565, 586, 658
EcoT38I GRGCYC 2 cut(s) 132, 433
FaeI CATG 7 cut(s) 17, 89, 101, 181, 485, 563, 700
FalI AAGNNNNNCTT 4 cut(s) 152, 184, 633, 665
FaqI GGGAC 1 cut(s) 429
FatI CATG 7 cut(s) 13, 85, 97, 177, 481, 559, 696
FauNDI CATATG 1 cut(s) 318
Fnu4HI GCNGC 1 cut(s) 68
FokI GGATG 2 cut(s) 76, 743
FriOI GRGCYC 2 cut(s) 132, 433
Fsp4HI GCNGC 1 cut(s) 68
FspBI CTAG 1 cut(s) 72
GluI GCNGC 1 cut(s) 68
HaeIII GGCC 2 cut(s) 341, 710
Hin1II CATG 7 cut(s) 17, 89, 101, 181, 485, 563, 700
HindIII AAGCTT 1 cut(s) 719
HinfI GANTC 3 cut(s) 380, 439, 740
HphI GGTGA 2 cut(s) 512, 644
Hpy166II GTNNAC 2 cut(s) 491, 694
Hpy188I TCNGA 1 cut(s) 602
Hpy188III TCNNGA 6 cut(s) 61, 260, 296, 434, 464, 482
Hpy8I GTNNAC 2 cut(s) 491, 694
HpyAV CCTTC 3 cut(s) 223, 416, 663
HpyCH4III ACNGT 2 cut(s) 472, 759
HpyCH4IV ACGT 3 cut(s) 611, 750, 907
HpyCH4V TGCA 6 cut(s) 195, 252, 369, 515, 682, 808
HpyF10VI GCNNNNNNNGC 1 cut(s) 64
HpyF3I CTNAG 5 cut(s) 59, 376, 384, 435, 705
HpySE526I ACGT 3 cut(s) 611, 750, 907
Hsp92II CATG 7 cut(s) 17, 89, 101, 181, 485, 563, 700
Kzo9I GATC 5 cut(s) 256, 292, 298, 646, 862
LmnI GCTCC 3 cut(s) 135, 436, 589
Lsp1109I GCAGC 1 cut(s) 54
LweI GCATC 2 cut(s) 54, 239
MaeI CTAG 1 cut(s) 72
MaeII ACGT 3 cut(s) 611, 750, 907
MaeIII GTNAC 3 cut(s) 508, 553, 632
MalI GATC 5 cut(s) 258, 294, 300, 648, 864
MboI GATC 5 cut(s) 256, 292, 298, 646, 862
MboII GAAGA 2 cut(s) 168, 258
MfeI CAATTG 1 cut(s) 683
MflI RGATCY 2 cut(s) 256, 292
MhlI GDGCHC 3 cut(s) 132, 433, 840
MnlI CCTC 8 cut(s) 331, 471, 512, 543, 596, 603, 727, 876
MroXI GAANNNNTTC 1 cut(s) 932
MseI TTAA 2 cut(s) 146, 348
MspR9I CCNGG 3 cut(s) 567, 588, 660
MunI CAATTG 1 cut(s) 683
MvaI CCWGG 3 cut(s) 567, 588, 660
MwoI GCNNNNNNNGC 1 cut(s) 64
NdeI CATATG 1 cut(s) 318
NdeII GATC 5 cut(s) 256, 292, 298, 646, 862
NlaIII CATG 7 cut(s) 17, 89, 101, 181, 485, 563, 700
NlaIV GGNNCC 2 cut(s) 131, 258
NmuCI GTSAC 2 cut(s) 508, 632
NspI RCATGY 2 cut(s) 17, 700
PagI TCATGA 1 cut(s) 481
PdmI GAANNNNTTC 1 cut(s) 932
PfeI GAWTC 3 cut(s) 380, 439, 740
PkrI GCNGC 1 cut(s) 69
PsiI TTATAA 1 cut(s) 47
Psp124BI GAGCTC 1 cut(s) 433
Psp1406I AACGTT 1 cut(s) 907
Psp6I CCWGG 3 cut(s) 565, 586, 658
PspEI GGTNACC 1 cut(s) 553
PspGI CCWGG 3 cut(s) 565, 586, 658
PspN4I GGNNCC 2 cut(s) 131, 258
PspPI GGNCC 3 cut(s) 340, 590, 778
PstI CTGCAG 1 cut(s) 517
PsuI RGATCY 2 cut(s) 256, 292
RsaI GTAC 5 cut(s) 165, 549, 580, 610, 664
RsaNI GTAC 5 cut(s) 164, 548, 579, 609, 663
SacI GAGCTC 1 cut(s) 433
SaqAI TTAA 2 cut(s) 146, 348
SatI GCNGC 1 cut(s) 68
Sau3AI GATC 5 cut(s) 256, 292, 298, 646, 862
Sau96I GGNCC 3 cut(s) 340, 590, 778
ScaI AGTACT 1 cut(s) 580
ScrFI CCNGG 3 cut(s) 567, 588, 660
SduI GDGCHC 3 cut(s) 132, 433, 840
SfaNI GCATC 2 cut(s) 54, 239
SfcI CTRYAG 2 cut(s) 495, 513
SinI GGWCC 2 cut(s) 590, 778
SmlI CTYRAG 1 cut(s) 443
SmoI CTYRAG 1 cut(s) 443
SsiI CCGC 2 cut(s) 725, 856
SspMI CTAG 1 cut(s) 72
SstI GAGCTC 1 cut(s) 433
StyD4I CCNGG 3 cut(s) 565, 586, 658
TaaI ACNGT 2 cut(s) 472, 759
TaiI ACGT 3 cut(s) 614, 753, 910
TaqI TCGA 1 cut(s) 154
TatI WGTACW 2 cut(s) 547, 578
TfiI GAWTC 3 cut(s) 380, 439, 740
Tru1I TTAA 2 cut(s) 146, 348
Tru9I TTAA 2 cut(s) 146, 348
TscAI CASTG 2 cut(s) 202, 366
TseFI GTSAC 2 cut(s) 508, 632
TseI GCWGC 1 cut(s) 67
Tsp45I GTSAC 2 cut(s) 508, 632
TspDTI ATGAA 6 cut(s) 17, 114, 200, 305, 576, 901
TspGWI ACGGA 1 cut(s) 269
TspRI CASTG 2 cut(s) 202, 366
VpaK11BI GGWCC 2 cut(s) 590, 778
XagI CCTNNNNNAGG 1 cut(s) 537
XapI RAATTY 3 cut(s) 207, 311, 764
XceI RCATGY 2 cut(s) 17, 700
XmnI GAANNNNTTC 1 cut(s) 932
XspI CTAG 1 cut(s) 72
ZrmI AGTACT 1 cut(s) 580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.