AT1G11680

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
3938422 .. 3940871
2450 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G11680.1

Sequence Viewer

Length: 1467 bp
ATGGAATTGGATTCGGAGAACAAATTGTTGAAGACGGGTTTGGTTATAGTGGCGACACTTGTTATAGCCAAACTCATCTTCTCTTTCTTCACTTCTGATTCTAAGAAGAAGCGTCTTCCTCCTACTCTTAAAGCTTGGCCTCCATTGGTTGGAAGTCTTATCAAATTCTTGAAAGGACCTATTATTATGCTTAGAGAGGAATACCCTAAGCTTGGAAGTGTGTTTACTGTTAATCTTGTTCACAAAAAGATTACTTTTCTTATTGGTCCTGAAGTCTCTGCTCATTTTTTCAAAGCTTCTGAATCTGATCTTAGTCAGCAGGAAGTGTATCAGTTCAATGTCCCTACTTTTGGTCCTGGAGTTGTTTTCGATGTTGATTATTCTGTTCGTCAGGAGCAGTTTCGGTTCTTCACTGAGGCACTTAGAGTTAACAAGTTGAAGGGTTATGTGGATATGATGGTTACTGAAGCTGAGGATTACTTCTCTAAATGGGGAGAGAGTGGTGAAGTTGATATTAAGGTTGAGCTAGAGAGGCTCATCATCTTGACTGCAAGTAGATGTTTACTGGGTCGAGAAGTTCGTGATCAGCTTTTTGATGATGTCTCTGCTTTGTTCCATGACCTTGACAATGGAATGCTTCCCATCAGTGTTCTCTTCCCATATCTCCCAATTCCAGCTCACCGCCGTCGTGACCGTGCCCGAGAAAAGCTTTCGGAGATTTTCGCAAAAATCATTGGGTCGAGAAAACGCTCTGGAAAAACAGAGAACGACATGCTGCAGTGTTTCATCGAATCAAAGTACAAAGATGGTAGACAGACAACCGAATCTGAAGTCACTGGTTTGCTCATTGCTGCTCTGTTTGCAGGACAACACACGAGCTCTATCACTTCCACCTGGACCGGTGCTTATCTGATGCGATACAAAGAGTACTTCTCAGCTGCTCTTGATGAGCAGAAGAACCTGATTGCGAAACATGGAGACAAGATCGATCATGATATCTTATCCGAGATGGATGTTCTCTACCGCTGCATTAAGGAAGCGTTGAGGCTTCACCCTCCACTCATCATGTTAATGAGAGCCTCGCACAGTGATTTCAGCGTGACAGCTCGGGATGGAAAAACTTACGATATCCCAAAGGGTCACATCGTTGCAACCTCCCCTGCATTTGCCAACCGCTTACCGCACATCTTCAAAGACCCCGACACCTACGACCCAGAAAGATTCTCCCCTGGAAGAGAAGAGGACAAAGCCGCAGGGGCATTCTCGTACATTGCATTCGGAGGGGGAAGGCACGGGTGCCTTGGAGAGCCGTTTGCTTACCTGCAGATCAAAGCCATATGGAGTCATTTGTTGAGGAACTTCGAGCTTGAGCTAGTTTCACCGTTCCCTGAGATTGACTGGAACGCTATGGTGGTTGGAGTTAAAGGCAATGTGATGGTGCGTTACAAGAGGCGCCAGCTTTCTTAA

Protein Analysis

488

Amino Acids

55.49

Weight (kDa)

8.41

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 46 - 459 4.4e-65 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1329
AccB1I GGYRCC 2 cut(s) 1296, 1452
AccB7I CCANNNNNTGG 1 cut(s) 149
AccI GTMKAC 1 cut(s) 811
AciI CCGC 5 cut(s) 682, 1024, 1174, 1181, 1251
AcsI RAATTY 1 cut(s) 164
AcuI CTGAAG 3 cut(s) 291, 486, 849
AcyI GRCGYC 1 cut(s) 1453
AfaI GTAC 3 cut(s) 800, 929, 1268
AfiI CCNNNNNNNGG 3 cut(s) 149, 212, 350
AgeI ACCGGT 1 cut(s) 899
AgsI TTSAA 6 cut(s) 31, 172, 292, 337, 439, 1192
AjnI CCWGG 3 cut(s) 355, 893, 1228
AjuI GAANNNNNNNTTGG 4 cut(s) 23, 55, 62, 94
Alw21I GWGCWC 1 cut(s) 881
Alw26I GTCTC 3 cut(s) 280, 607, 972
Ama87I CYCGRG 2 cut(s) 699, 1107
AoxI GGCC 1 cut(s) 137
ApeKI GCWGC 4 cut(s) 775, 851, 938, 1026
ApoI RAATTY 1 cut(s) 164
ArsI GACNNNNNNTTYG 2 cut(s) 816, 848
AsiGI ACCGGT 1 cut(s) 899
AspLEI GCGC 1 cut(s) 1455
AspS9I GGNCC 4 cut(s) 176, 266, 353, 897
AsuHPI GGTGA 4 cut(s) 515, 671, 1043, 1371
AvaI CYCGRG 2 cut(s) 699, 1107
AvaII GGWCC 4 cut(s) 176, 266, 353, 897
BaeGI GKGCMC 1 cut(s) 700
BanI GGYRCC 2 cut(s) 1296, 1452
BanII GRGCYC 1 cut(s) 881
BarI GAAGNNNNNNTAC 2 cut(s) 208, 240
BauI CACGAG 1 cut(s) 874
BbsI GAAGAC 2 cut(s) 38, 107
Bbv12I GWGCWC 1 cut(s) 881
BbvCI CCTCAGC 1 cut(s) 471
BbvI GCAGC 4 cut(s) 762, 838, 925, 1013
BccI CCATC 6 cut(s) 451, 650, 800, 1003, 1106, 1429
BceAI ACGGC 2 cut(s) 669, 1294
BciT130I CCWGG 3 cut(s) 357, 895, 1230
BclI TGATCA 1 cut(s) 583
BcoDI GTCTC 3 cut(s) 280, 607, 972
BfaI CTAG 2 cut(s) 527, 1373
BfmI CTRYAG 2 cut(s) 776, 1322
BfoI RGCGCY 1 cut(s) 1456
BfuAI ACCTGC 1 cut(s) 1329
BglI GCCNNNNNGGC 1 cut(s) 1256
BisI GCNGC 5 cut(s) 776, 852, 939, 1027, 1251
BlsI GCNGC 5 cut(s) 777, 853, 940, 1028, 1252
BmcAI AGTACT 1 cut(s) 929
Bme1390I CCNGG 3 cut(s) 357, 895, 1230
Bme18I GGWCC 4 cut(s) 176, 266, 353, 897
BmeT110I CYCGRG 2 cut(s) 699, 1107
BmgT120I GGNCC 4 cut(s) 176, 266, 353, 897
BmiI GGNNCC 2 cut(s) 1298, 1454
BmrFI CCNGG 3 cut(s) 357, 895, 1230
BmrI ACTGGG 1 cut(s) 575
BmsI GCATC 1 cut(s) 903
BmuI ACTGGG 1 cut(s) 575
BpiI GAAGAC 2 cut(s) 38, 107
BplI GAGNNNNNCTC 2 cut(s) 917, 949
BpmI CTGGAG 1 cut(s) 378
Bpu10I CCTNAGC 2 cut(s) 207, 471
BpuEI CTTGAG 1 cut(s) 1388
Bsa29I ATCGAT 1 cut(s) 987
BsaHI GRCGYC 1 cut(s) 1453
BsaJI CCNNGG 2 cut(s) 1228, 1300
BsaWI WCCGGW 1 cut(s) 899
Bsc4I CCNNNNNNNGG 3 cut(s) 149, 212, 350
Bse118I RCCGGY 1 cut(s) 899
Bse1I ACTGG 3 cut(s) 570, 841, 1403
Bse3DI GCAATG 3 cut(s) 846, 1269, 1435
BseBI CCWGG 3 cut(s) 357, 895, 1230
BseCI ATCGAT 1 cut(s) 987
BseDI CCNNGG 2 cut(s) 1228, 1300
BseGI GGATG 2 cut(s) 1018, 1117
BseLI CCNNNNNNNGG 3 cut(s) 149, 212, 350
BseMI GCAATG 3 cut(s) 846, 1269, 1435
BseMII CTCAG 4 cut(s) 405, 462, 948, 1380
BseNI ACTGG 3 cut(s) 570, 841, 1403
BseSI GKGCMC 1 cut(s) 700
BseXI GCAGC 4 cut(s) 762, 838, 925, 1013
BshFI GGCC 1 cut(s) 139
BshNI GGYRCC 2 cut(s) 1296, 1452
BshTI ACCGGT 1 cut(s) 899
BshVI ATCGAT 1 cut(s) 987
BsiHKAI GWGCWC 1 cut(s) 881
BsiHKCI CYCGRG 2 cut(s) 699, 1107
BsiSI CCGG 1 cut(s) 900
BslFI GGGAC 1 cut(s) 326
BslI CCNNNNNNNGG 3 cut(s) 149, 212, 350
BsmAI GTCTC 3 cut(s) 280, 607, 972
BsmFI GGGAC 1 cut(s) 326
BsmI GAATGC 3 cut(s) 639, 1259, 1274
BsnI GGCC 1 cut(s) 139
BsoBI CYCGRG 2 cut(s) 699, 1107
Bsp1286I GDGCHC 2 cut(s) 700, 881
Bsp143I GATC 5 cut(s) 307, 583, 984, 988, 1326
BspACI CCGC 5 cut(s) 682, 1024, 1174, 1181, 1251
BspANI GGCC 1 cut(s) 139
BspCNI CTCAG 4 cut(s) 406, 463, 947, 1381
BspDI ATCGAT 1 cut(s) 987
BspHI TCATGA 1 cut(s) 991
BspLI GGNNCC 2 cut(s) 1298, 1454
BspMAI CTGCAG 2 cut(s) 780, 1326
BspMI ACCTGC 1 cut(s) 1329
BspT107I GGYRCC 2 cut(s) 1296, 1452
BsrDI GCAATG 3 cut(s) 846, 1269, 1435
BsrFI RCCGGY 1 cut(s) 899
BsrI ACTGG 3 cut(s) 570, 841, 1403
BssAI RCCGGY 1 cut(s) 899
BssECI CCNNGG 2 cut(s) 1228, 1300
BssMI GATC 5 cut(s) 307, 583, 984, 988, 1326
BssNI GRCGYC 1 cut(s) 1453
BssSI CACGAG 1 cut(s) 874
BssT1I CCWWGG 1 cut(s) 1300
Bst2BI CACGAG 1 cut(s) 874
Bst2UI CCWGG 3 cut(s) 357, 895, 1230
Bst4CI ACNGT 4 cut(s) 229, 695, 1088, 1383
Bst6I CTCTTC 3 cut(s) 659, 1228, 1233
BstACI GRCGYC 1 cut(s) 1453
BstC8I GCNNGC 1 cut(s) 1457
BstDEI CTNAG 9 cut(s) 102, 191, 207, 311, 414, 422, 471, 934, 1389
BstF5I GGATG 2 cut(s) 1018, 1117
BstH2I RGCGCY 1 cut(s) 1456
BstHHI GCGC 1 cut(s) 1455
BstKTI GATC 5 cut(s) 310, 586, 987, 991, 1329
BstMAI GTCTC 3 cut(s) 280, 607, 972
BstMBI GATC 5 cut(s) 307, 583, 984, 988, 1326
BstMWI GCNNNNNNNGC 3 cut(s) 532, 860, 1256
BstNI CCWGG 3 cut(s) 357, 895, 1230
BstNSI RCATGY 1 cut(s) 775
BstSCI CCNGG 3 cut(s) 355, 893, 1228
BstSFI CTRYAG 2 cut(s) 776, 1322
BstSLI GKGCMC 1 cut(s) 700
BstV1I GCAGC 4 cut(s) 762, 838, 925, 1013
BstV2I GAAGAC 2 cut(s) 38, 107
Bsu15I ATCGAT 1 cut(s) 987
BsuRI GGCC 1 cut(s) 139
BsuTUI ATCGAT 1 cut(s) 987
BtsCI GGATG 2 cut(s) 1018, 1117
BtsI GCAGTG 1 cut(s) 785
BtsIMutI CAGTG 5 cut(s) 411, 652, 785, 834, 1093
BveI ACCTGC 1 cut(s) 1329
Cac8I GCNNGC 1 cut(s) 1457
CciI TCATGA 1 cut(s) 991
CfoI GCGC 1 cut(s) 1455
Cfr10I RCCGGY 1 cut(s) 899
Cfr13I GGNCC 4 cut(s) 176, 266, 353, 897
ClaI ATCGAT 1 cut(s) 987
CseI GACGC 1 cut(s) 101
Csp6I GTAC 3 cut(s) 799, 928, 1267
CspAI ACCGGT 1 cut(s) 899
CviAII CATG 5 cut(s) 617, 772, 974, 992, 1066
CviQI GTAC 3 cut(s) 799, 928, 1267
DdeI CTNAG 9 cut(s) 102, 191, 207, 311, 414, 422, 471, 934, 1389
DinI GGCGCC 1 cut(s) 1454
DpnI GATC 5 cut(s) 309, 585, 986, 990, 1328
DpnII GATC 5 cut(s) 307, 583, 984, 988, 1326
Eam1104I CTCTTC 3 cut(s) 659, 1228, 1233
EarI CTCTTC 3 cut(s) 659, 1228, 1233
Ecl136II GAGCTC 1 cut(s) 879
Eco130I CCWWGG 1 cut(s) 1300
Eco24I GRGCYC 1 cut(s) 881
Eco32I GATATC 2 cut(s) 997, 1129
Eco47I GGWCC 4 cut(s) 176, 266, 353, 897
Eco53kI GAGCTC 1 cut(s) 879
Eco57I CTGAAG 3 cut(s) 291, 486, 849
Eco88I CYCGRG 2 cut(s) 699, 1107
EcoICRI GAGCTC 1 cut(s) 879
EcoO109I RGGNCCY 1 cut(s) 176
EcoRII CCWGG 3 cut(s) 355, 893, 1228
EcoRV GATATC 2 cut(s) 997, 1129
EcoT14I CCWWGG 1 cut(s) 1300
EcoT38I GRGCYC 1 cut(s) 881
EgeI GGCGCC 1 cut(s) 1454
EheI GGCGCC 1 cut(s) 1454
ErhI CCWWGG 1 cut(s) 1300
FaeI CATG 5 cut(s) 620, 775, 977, 995, 1069
FaqI GGGAC 1 cut(s) 326
FatI CATG 5 cut(s) 616, 771, 973, 991, 1065
FauNDI CATATG 1 cut(s) 1337
FbaI TGATCA 1 cut(s) 583
FblI GTMKAC 1 cut(s) 811
Fnu4HI GCNGC 5 cut(s) 776, 852, 939, 1027, 1251
FokI GGATG 2 cut(s) 1025, 1124
FriOI GRGCYC 1 cut(s) 881
Fsp4HI GCNGC 5 cut(s) 776, 852, 939, 1027, 1251
FspBI CTAG 2 cut(s) 527, 1373
GlaI GCGC 1 cut(s) 1454
GluI GCNGC 5 cut(s) 776, 852, 939, 1027, 1251
GsuI CTGGAG 1 cut(s) 378
HaeII RGCGCY 1 cut(s) 1456
HaeIII GGCC 1 cut(s) 139
HapII CCGG 1 cut(s) 900
HgaI GACGC 1 cut(s) 101
HhaI GCGC 1 cut(s) 1455
Hin1I GRCGYC 1 cut(s) 1453
Hin1II CATG 5 cut(s) 620, 775, 977, 995, 1069
Hin6I GCGC 1 cut(s) 1453
HinP1I GCGC 1 cut(s) 1453
HincII GTYRAC 1 cut(s) 430
HindII GTYRAC 1 cut(s) 430
HindIII AAGCTT 4 cut(s) 132, 209, 294, 707
HinfI GANTC 7 cut(s) 11, 98, 302, 791, 824, 1221, 1342
HpaI GTTAAC 1 cut(s) 430
HpaII CCGG 1 cut(s) 900
HphI GGTGA 4 cut(s) 515, 671, 1043, 1371
Hpy166II GTNNAC 5 cut(s) 225, 241, 430, 563, 812
Hpy188I TCNGA 9 cut(s) 16, 97, 301, 307, 715, 829, 912, 1006, 1280
Hpy8I GTNNAC 5 cut(s) 225, 241, 430, 563, 812
Hpy99I CGWCG 1 cut(s) 690
HpyAV CCTTC 2 cut(s) 433, 1281
HpyCH4III ACNGT 4 cut(s) 229, 695, 1088, 1383
HpyCH4V TGCA 8 cut(s) 551, 778, 863, 1029, 1151, 1163, 1274, 1324
HpyF10VI GCNNNNNNNGC 3 cut(s) 532, 860, 1256
HpyF3I CTNAG 9 cut(s) 102, 191, 207, 311, 414, 422, 471, 934, 1389
Hsp92I GRCGYC 1 cut(s) 1453
Hsp92II CATG 5 cut(s) 620, 775, 977, 995, 1069
HspAI GCGC 1 cut(s) 1453
KasI GGCGCC 1 cut(s) 1452
Ksp22I TGATCA 1 cut(s) 583
KspAI GTTAAC 1 cut(s) 430
Kzo9I GATC 5 cut(s) 307, 583, 984, 988, 1326
LmnI GCTCC 1 cut(s) 394
Lsp1109I GCAGC 4 cut(s) 762, 838, 925, 1013
LweI GCATC 1 cut(s) 903
MaeI CTAG 2 cut(s) 527, 1373
MaeIII GTNAC 6 cut(s) 460, 689, 832, 1099, 1139, 1442
MalI GATC 5 cut(s) 309, 585, 986, 990, 1328
MboI GATC 5 cut(s) 307, 583, 984, 988, 1326
MhlI GDGCHC 2 cut(s) 700, 881
MluCI AATT 4 cut(s) 5, 23, 164, 669
Mly113I GGCGCC 1 cut(s) 1453
MlyI GAGTC 1 cut(s) 1351
MmeI TCCRAC 2 cut(s) 130, 1396
MseI TTAA 8 cut(s) 129, 231, 429, 516, 1032, 1070, 1422, 1465
MslI CAYNNNNRTG 1 cut(s) 1070
MspA1I CMGCKG 2 cut(s) 938, 1026
MspI CCGG 1 cut(s) 900
MspR9I CCNGG 3 cut(s) 357, 895, 1230
Mva1269I GAATGC 3 cut(s) 639, 1259, 1274
MvaI CCWGG 3 cut(s) 357, 895, 1230
MwoI GCNNNNNNNGC 3 cut(s) 532, 860, 1256
NarI GGCGCC 1 cut(s) 1453
NdeI CATATG 1 cut(s) 1337
NdeII GATC 5 cut(s) 307, 583, 984, 988, 1326
NlaIII CATG 5 cut(s) 620, 775, 977, 995, 1069
NlaIV GGNNCC 2 cut(s) 1298, 1454
NmuCI GTSAC 4 cut(s) 689, 832, 1099, 1139
NspI RCATGY 1 cut(s) 775
PagI TCATGA 1 cut(s) 991
PcsI WCGNNNNNNNCGW 1 cut(s) 577
PctI GAATGC 3 cut(s) 639, 1259, 1274
PfeI GAWTC 6 cut(s) 11, 98, 302, 791, 824, 1221
PflMI CCANNNNNTGG 1 cut(s) 149
PfoI TCCNGGA 1 cut(s) 355
PinAI ACCGGT 1 cut(s) 899
PkrI GCNGC 5 cut(s) 777, 853, 940, 1028, 1252
PleI GAGTC 1 cut(s) 1350
PluTI GGCGCC 1 cut(s) 1456
PpsI GAGTC 1 cut(s) 1350
PpuMI RGGWCCY 1 cut(s) 176
Psp124BI GAGCTC 1 cut(s) 881
Psp5II RGGWCCY 1 cut(s) 176
Psp6I CCWGG 3 cut(s) 355, 893, 1228
PspGI CCWGG 3 cut(s) 355, 893, 1228
PspN4I GGNNCC 2 cut(s) 1298, 1454
PspPI GGNCC 4 cut(s) 176, 266, 353, 897
PspPPI RGGWCCY 1 cut(s) 176
PstI CTGCAG 2 cut(s) 780, 1326
PvuII CAGCTG 1 cut(s) 938
RsaI GTAC 3 cut(s) 800, 929, 1268
RsaNI GTAC 3 cut(s) 799, 928, 1267
RseI CAYNNNNRTG 1 cut(s) 1070
SacI GAGCTC 1 cut(s) 881
SaqAI TTAA 8 cut(s) 129, 231, 429, 516, 1032, 1070, 1422, 1465
SatI GCNGC 5 cut(s) 776, 852, 939, 1027, 1251
Sau3AI GATC 5 cut(s) 307, 583, 984, 988, 1326
Sau96I GGNCC 4 cut(s) 176, 266, 353, 897
ScaI AGTACT 1 cut(s) 929
SchI GAGTC 1 cut(s) 1351
ScrFI CCNGG 3 cut(s) 357, 895, 1230
SduI GDGCHC 2 cut(s) 700, 881
SfaNI GCATC 1 cut(s) 903
SfcI CTRYAG 2 cut(s) 776, 1322
SfoI GGCGCC 1 cut(s) 1454
SinI GGWCC 4 cut(s) 176, 266, 353, 897
SmiMI CAYNNNNRTG 1 cut(s) 1070
SmlI CTYRAG 1 cut(s) 1367
SmoI CTYRAG 1 cut(s) 1367
Sse9I AATT 4 cut(s) 5, 23, 164, 669
SsiI CCGC 5 cut(s) 682, 1024, 1174, 1181, 1251
SspDI GGCGCC 1 cut(s) 1452
SspMI CTAG 2 cut(s) 527, 1373
SstI GAGCTC 1 cut(s) 881
StyD4I CCNGG 3 cut(s) 355, 893, 1228
StyI CCWWGG 1 cut(s) 1300
TaaI ACNGT 4 cut(s) 229, 695, 1088, 1383
TaqI TCGA 6 cut(s) 369, 571, 740, 789, 987, 1362
TasI AATT 4 cut(s) 5, 23, 164, 669
TatI WGTACW 2 cut(s) 798, 927
TauI GCSGC 1 cut(s) 1253
TfiI GAWTC 6 cut(s) 11, 98, 302, 791, 824, 1221
Tru1I TTAA 8 cut(s) 129, 231, 429, 516, 1032, 1070, 1422, 1465
Tru9I TTAA 8 cut(s) 129, 231, 429, 516, 1032, 1070, 1422, 1465
TscAI CASTG 5 cut(s) 418, 652, 785, 841, 1093
TseFI GTSAC 4 cut(s) 689, 832, 1099, 1139
TseI GCWGC 4 cut(s) 775, 851, 938, 1026
Tsp45I GTSAC 4 cut(s) 689, 832, 1099, 1139
TspDTI ATGAA 1 cut(s) 775
TspRI CASTG 5 cut(s) 418, 652, 785, 841, 1093
Van91I CCANNNNNTGG 1 cut(s) 149
VpaK11BI GGWCC 4 cut(s) 176, 266, 353, 897
XapI RAATTY 1 cut(s) 164
XceI RCATGY 1 cut(s) 775
XmiI GTMKAC 1 cut(s) 811
XspI CTAG 2 cut(s) 527, 1373
ZrmI AGTACT 1 cut(s) 929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.