Lignin degradation and detoxification of lignin-derived products
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G18140 |
| fragaria_vesca | FvH4_5g17150 |
| malus_domestica | MD06G1230100.v1.1 MD14G1234800.v1.1 |
| prunus_persica | Prupe.5G231100_v2.0.a1 |
| pyrus_communis | pycom14g19580 |
| rosa_chinensis | RchiOBHm_Chr7g0178641 |
| rosa_laevigata | RLG00000005427 |
| rosa_multiflora | Rmu_sc0002320.1_g000007 |
| rosa_rugosa | Rorug06G0418700 |
| rosa_samantha | Rh7AG017400 Rh7BG017000 |
| rosa_wichuraiana | Rw7G001410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1172 |
| AccI | GTMKAC | 4 cut(s) | 417, 648, 747, 992 |
| AccII | CGCG | 4 cut(s) | 442, 752, 825, 1034 |
| AclWI | GGATC | 9 cut(s) | 369, 1075, 1231, 1325, 1399, 1511, 1524, 1535, 1548 |
| AcsI | RAATTY | 9 cut(s) | 7, 483, 848, 949, 1028, 1040, 1358, 1385, 1498 |
| AcyI | GRCGYC | 1 cut(s) | 651 |
| AfaI | GTAC | 4 cut(s) | 189, 1366, 1458, 1529 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 461, 558, 591, 1513, 1577 |
| AflIII | ACRYGT | 1 cut(s) | 1453 |
| AgeI | ACCGGT | 3 cut(s) | 278, 766, 929 |
| AgsI | TTSAA | 3 cut(s) | 78, 352, 895 |
| AjiI | CACGTC | 1 cut(s) | 520 |
| AjnI | CCWGG | 3 cut(s) | 169, 1140, 1612 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 468, 500, 617, 649 |
| AleI | CACNNNNGTG | 1 cut(s) | 195 |
| AluBI | AGCT | 6 cut(s) | 557, 689, 703, 1004, 1248, 1372 |
| AluI | AGCT | 6 cut(s) | 557, 689, 703, 1004, 1248, 1372 |
| Alw21I | GWGCWC | 1 cut(s) | 705 |
| Alw26I | GTCTC | 2 cut(s) | 964, 1136 |
| AlwI | GGATC | 9 cut(s) | 369, 1075, 1231, 1325, 1399, 1511, 1524, 1535, 1548 |
| AoxI | GGCC | 1 cut(s) | 601 |
| ApeKI | GCWGC | 3 cut(s) | 445, 465, 686 |
| ApoI | RAATTY | 9 cut(s) | 7, 483, 848, 949, 1028, 1040, 1358, 1385, 1498 |
| AsiGI | ACCGGT | 3 cut(s) | 278, 766, 929 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1187, 1310, 1373 |
| AspLEI | GCGC | 2 cut(s) | 425, 827 |
| AspS9I | GGNCC | 5 cut(s) | 173, 276, 293, 602, 1691 |
| AsuC2I | CCSGG | 3 cut(s) | 600, 798, 1508 |
| AsuHPI | GGTGA | 5 cut(s) | 166, 209, 512, 857, 1111 |
| AsuII | TTCGAA | 1 cut(s) | 1377 |
| AvaII | GGWCC | 4 cut(s) | 173, 276, 293, 1691 |
| BamHI | GGATCC | 2 cut(s) | 1516, 1540 |
| BanII | GRGCYC | 1 cut(s) | 705 |
| BbsI | GAAGAC | 1 cut(s) | 554 |
| Bbv12I | GWGCWC | 1 cut(s) | 705 |
| BbvI | GCAGC | 3 cut(s) | 457, 477, 698 |
| BccI | CCATC | 3 cut(s) | 284, 1575, 1682 |
| BceAI | ACGGC | 5 cut(s) | 436, 654, 980, 989, 999 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 19, 53 |
| BciT130I | CCWGG | 3 cut(s) | 171, 1142, 1614 |
| BciVI | GTATCC | 2 cut(s) | 1015, 1089 |
| BclI | TGATCA | 1 cut(s) | 1116 |
| BcnI | CCSGG | 3 cut(s) | 600, 798, 1508 |
| BcoDI | GTCTC | 2 cut(s) | 964, 1136 |
| BfaI | CTAG | 1 cut(s) | 1640 |
| BfmI | CTRYAG | 2 cut(s) | 714, 735 |
| BfoI | RGCGCY | 1 cut(s) | 426 |
| BfuAI | ACCTGC | 1 cut(s) | 1172 |
| BfuI | GTATCC | 2 cut(s) | 1015, 1089 |
| BisI | GCNGC | 6 cut(s) | 443, 446, 466, 687, 861, 1587 |
| BlsI | GCNGC | 6 cut(s) | 444, 447, 467, 688, 862, 1588 |
| Bme1390I | CCNGG | 6 cut(s) | 171, 600, 798, 1142, 1508, 1614 |
| Bme18I | GGWCC | 4 cut(s) | 173, 276, 293, 1691 |
| BmgBI | CACGTC | 1 cut(s) | 520 |
| BmgT120I | GGNCC | 5 cut(s) | 173, 276, 293, 602, 1691 |
| BmiI | GGNNCC | 2 cut(s) | 1518, 1542 |
| BmrFI | CCNGG | 6 cut(s) | 171, 600, 798, 1142, 1508, 1614 |
| BmsI | GCATC | 2 cut(s) | 1062, 1205 |
| BpiI | GAAGAC | 1 cut(s) | 554 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 360, 392 |
| BpmI | CTGGAG | 1 cut(s) | 1124 |
| Bpu14I | TTCGAA | 1 cut(s) | 1377 |
| BpuMI | CCSGG | 3 cut(s) | 600, 798, 1508 |
| Bsa29I | ATCGAT | 1 cut(s) | 1235 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1235 |
| BsaHI | GRCGYC | 1 cut(s) | 651 |
| BsaJI | CCNNGG | 2 cut(s) | 180, 440 |
| BsaWI | WCCGGW | 8 cut(s) | 225, 273, 278, 551, 766, 929, 943, 1333 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 821, 851 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 461, 558, 591, 1513, 1577 |
| Bse118I | RCCGGY | 4 cut(s) | 278, 295, 766, 929 |
| Bse3DI | GCAATG | 3 cut(s) | 317, 993, 1674 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1235 |
| BseBI | CCWGG | 3 cut(s) | 171, 1142, 1614 |
| BseCI | ATCGAT | 1 cut(s) | 1235 |
| BseDI | CCNNGG | 2 cut(s) | 180, 440 |
| BseGI | GGATG | 4 cut(s) | 666, 918, 1444, 1586 |
| BseJI | GATNNNNATC | 1 cut(s) | 1235 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 461, 558, 591, 1513, 1577 |
| BseMI | GCAATG | 3 cut(s) | 317, 993, 1674 |
| BseRI | GAGGAG | 2 cut(s) | 1710, 1713 |
| BseXI | GCAGC | 3 cut(s) | 457, 477, 698 |
| BseYI | CCCAGC | 1 cut(s) | 557 |
| Bsh1236I | CGCG | 4 cut(s) | 442, 752, 825, 1034 |
| Bsh1285I | CGRYCG | 2 cut(s) | 180, 645 |
| BshFI | GGCC | 1 cut(s) | 603 |
| BshTI | ACCGGT | 3 cut(s) | 278, 766, 929 |
| BshVI | ATCGAT | 1 cut(s) | 1235 |
| BsiEI | CGRYCG | 2 cut(s) | 180, 645 |
| BsiHKAI | GWGCWC | 1 cut(s) | 705 |
| BslFI | GGGAC | 1 cut(s) | 1076 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 461, 558, 591, 1513, 1577 |
| BsmAI | GTCTC | 2 cut(s) | 964, 1136 |
| BsmBI | CGTCTC | 1 cut(s) | 964 |
| BsmFI | GGGAC | 1 cut(s) | 1076 |
| BsnI | GGCC | 1 cut(s) | 603 |
| Bsp119I | TTCGAA | 1 cut(s) | 1377 |
| Bsp1286I | GDGCHC | 1 cut(s) | 705 |
| Bsp1407I | TGTACA | 1 cut(s) | 1456 |
| Bsp68I | TCGCGA | 1 cut(s) | 1034 |
| BspANI | GGCC | 1 cut(s) | 603 |
| BspDI | ATCGAT | 1 cut(s) | 1235 |
| BspFNI | CGCG | 4 cut(s) | 442, 752, 825, 1034 |
| BspHI | TCATGA | 2 cut(s) | 786, 1726 |
| BspLI | GGNNCC | 2 cut(s) | 1518, 1542 |
| BspMI | ACCTGC | 1 cut(s) | 1172 |
| BspPI | GGATC | 9 cut(s) | 369, 1075, 1231, 1325, 1399, 1511, 1524, 1535, 1548 |
| BspQI | GCTCTTC | 1 cut(s) | 710 |
| BspT104I | TTCGAA | 1 cut(s) | 1377 |
| BsrDI | GCAATG | 3 cut(s) | 317, 993, 1674 |
| BsrFI | RCCGGY | 4 cut(s) | 278, 295, 766, 929 |
| BsrGI | TGTACA | 1 cut(s) | 1456 |
| BssAI | RCCGGY | 4 cut(s) | 278, 295, 766, 929 |
| BssECI | CCNNGG | 2 cut(s) | 180, 440 |
| BssNI | GRCGYC | 1 cut(s) | 651 |
| Bst2UI | CCWGG | 3 cut(s) | 171, 1142, 1614 |
| Bst4CI | ACNGT | 8 cut(s) | 154, 181, 646, 736, 910, 997, 1172, 1634 |
| Bst6I | CTCTTC | 5 cut(s) | 60, 710, 1178, 1480, 1701 |
| BstACI | GRCGYC | 1 cut(s) | 651 |
| BstAUI | TGTACA | 1 cut(s) | 1456 |
| BstBI | TTCGAA | 1 cut(s) | 1377 |
| BstC8I | GCNNGC | 1 cut(s) | 387 |
| BstDEI | CTNAG | 1 cut(s) | 1737 |
| BstDSI | CCRYGG | 2 cut(s) | 180, 440 |
| BstF5I | GGATG | 4 cut(s) | 666, 918, 1444, 1586 |
| BstFNI | CGCG | 4 cut(s) | 442, 752, 825, 1034 |
| BstH2I | RGCGCY | 1 cut(s) | 426 |
| BstHHI | GCGC | 2 cut(s) | 425, 827 |
| BstMAI | GTCTC | 2 cut(s) | 964, 1136 |
| BstMCI | CGRYCG | 2 cut(s) | 180, 645 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 973 |
| BstNI | CCWGG | 3 cut(s) | 171, 1142, 1614 |
| BstNSI | RCATGY | 2 cut(s) | 389, 1457 |
| BstSCI | CCNGG | 6 cut(s) | 169, 598, 796, 1140, 1506, 1612 |
| BstSFI | CTRYAG | 2 cut(s) | 714, 735 |
| BstUI | CGCG | 4 cut(s) | 442, 752, 825, 1034 |
| BstV1I | GCAGC | 3 cut(s) | 457, 477, 698 |
| BstV2I | GAAGAC | 1 cut(s) | 554 |
| BstX2I | RGATCY | 3 cut(s) | 1330, 1516, 1540 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1620 |
| BstYI | RGATCY | 3 cut(s) | 1330, 1516, 1540 |
| Bsu15I | ATCGAT | 1 cut(s) | 1235 |
| BsuI | GTATCC | 2 cut(s) | 1015, 1089 |
| BsuRI | GGCC | 1 cut(s) | 603 |
| BsuTUI | ATCGAT | 1 cut(s) | 1235 |
| BtgI | CCRYGG | 2 cut(s) | 180, 440 |
| BtgZI | GCGATG | 2 cut(s) | 554, 841 |
| BtrI | CACGTC | 1 cut(s) | 520 |
| BtsCI | GGATG | 4 cut(s) | 666, 918, 1444, 1586 |
| BtsI | GCAGTG | 1 cut(s) | 1572 |
| BtsIMutI | CAGTG | 3 cut(s) | 1572, 1630, 1745 |
| BtuMI | TCGCGA | 1 cut(s) | 1034 |
| BveI | ACCTGC | 1 cut(s) | 1172 |
| Cac8I | GCNNGC | 1 cut(s) | 387 |
| CciI | TCATGA | 2 cut(s) | 786, 1726 |
| CfoI | GCGC | 2 cut(s) | 425, 827 |
| Cfr10I | RCCGGY | 4 cut(s) | 278, 295, 766, 929 |
| Cfr13I | GGNCC | 5 cut(s) | 173, 276, 293, 602, 1691 |
| Cfr42I | CCGCGG | 1 cut(s) | 443 |
| ClaI | ATCGAT | 1 cut(s) | 1235 |
| CpoI | CGGWCCG | 1 cut(s) | 276 |
| CseI | GACGC | 3 cut(s) | 584, 659, 758 |
| Csp6I | GTAC | 4 cut(s) | 188, 1365, 1457, 1528 |
| CspAI | ACCGGT | 3 cut(s) | 278, 766, 929 |
| CspI | CGGWCCG | 1 cut(s) | 276 |
| CviAII | CATG | 9 cut(s) | 257, 386, 399, 615, 787, 1083, 1348, 1454, 1727 |
| CviQI | GTAC | 4 cut(s) | 188, 1365, 1457, 1528 |
| DdeI | CTNAG | 1 cut(s) | 1737 |
| Eam1104I | CTCTTC | 5 cut(s) | 60, 710, 1178, 1480, 1701 |
| EarI | CTCTTC | 5 cut(s) | 60, 710, 1178, 1480, 1701 |
| EciI | GGCGGA | 2 cut(s) | 982, 1533 |
| Ecl136II | GAGCTC | 1 cut(s) | 703 |
| Eco24I | GRGCYC | 1 cut(s) | 705 |
| Eco32I | GATATC | 1 cut(s) | 1233 |
| Eco47I | GGWCC | 4 cut(s) | 173, 276, 293, 1691 |
| Eco53kI | GAGCTC | 1 cut(s) | 703 |
| EcoICRI | GAGCTC | 1 cut(s) | 703 |
| EcoRI | GAATTC | 2 cut(s) | 1358, 1385 |
| EcoRII | CCWGG | 3 cut(s) | 169, 1140, 1612 |
| EcoRV | GATATC | 1 cut(s) | 1233 |
| EcoT38I | GRGCYC | 1 cut(s) | 705 |
| Esp3I | CGTCTC | 1 cut(s) | 964 |
| FaeI | CATG | 9 cut(s) | 260, 389, 402, 618, 790, 1086, 1351, 1457, 1730 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1175, 1207 |
| FaqI | GGGAC | 1 cut(s) | 1076 |
| FatI | CATG | 9 cut(s) | 256, 385, 398, 614, 786, 1082, 1347, 1453, 1726 |
| FbaI | TGATCA | 1 cut(s) | 1116 |
| FblI | GTMKAC | 4 cut(s) | 417, 648, 747, 992 |
| Fnu4HI | GCNGC | 6 cut(s) | 443, 446, 466, 687, 861, 1587 |
| FokI | GGATG | 4 cut(s) | 653, 905, 1431, 1593 |
| FriOI | GRGCYC | 1 cut(s) | 705 |
| Fsp4HI | GCNGC | 6 cut(s) | 443, 446, 466, 687, 861, 1587 |
| FspBI | CTAG | 1 cut(s) | 1640 |
| GlaI | GCGC | 2 cut(s) | 424, 826 |
| GluI | GCNGC | 6 cut(s) | 443, 446, 466, 687, 861, 1587 |
| GsaI | CCCAGC | 1 cut(s) | 561 |
| GsuI | CTGGAG | 1 cut(s) | 1124 |
| HaeII | RGCGCY | 1 cut(s) | 426 |
| HaeIII | GGCC | 1 cut(s) | 603 |
| HgaI | GACGC | 3 cut(s) | 584, 659, 758 |
| HhaI | GCGC | 2 cut(s) | 425, 827 |
| Hin1I | GRCGYC | 1 cut(s) | 651 |
| Hin1II | CATG | 9 cut(s) | 260, 389, 402, 618, 790, 1086, 1351, 1457, 1730 |
| Hin6I | GCGC | 2 cut(s) | 423, 825 |
| HinP1I | GCGC | 2 cut(s) | 423, 825 |
| HincII | GTYRAC | 2 cut(s) | 748, 993 |
| HindII | GTYRAC | 2 cut(s) | 748, 993 |
| HindIII | AAGCTT | 1 cut(s) | 1370 |
| HinfI | GANTC | 6 cut(s) | 348, 721, 915, 1188, 1311, 1441 |
| HphI | GGTGA | 5 cut(s) | 166, 209, 512, 857, 1111 |
| Hpy188III | TCNNGA | 8 cut(s) | 787, 1009, 1033, 1093, 1395, 1438, 1640, 1727 |
| Hpy99I | CGWCG | 8 cut(s) | 90, 578, 713, 752, 1039, 1099, 1172, 1576 |
| HpyAV | CCTTC | 5 cut(s) | 109, 188, 824, 1507, 1710 |
| HpyCH4III | ACNGT | 8 cut(s) | 154, 181, 646, 736, 910, 997, 1172, 1634 |
| HpyCH4IV | ACGT | 2 cut(s) | 519, 873 |
| HpyCH4V | TGCA | 2 cut(s) | 686, 1565 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 973 |
| HpyF3I | CTNAG | 1 cut(s) | 1737 |
| HpySE526I | ACGT | 2 cut(s) | 519, 873 |
| Hsp92I | GRCGYC | 1 cut(s) | 651 |
| Hsp92II | CATG | 9 cut(s) | 260, 389, 402, 618, 790, 1086, 1351, 1457, 1730 |
| HspAI | GCGC | 2 cut(s) | 423, 825 |
| Ksp22I | TGATCA | 1 cut(s) | 1116 |
| KspI | CCGCGG | 1 cut(s) | 443 |
| LguI | GCTCTTC | 1 cut(s) | 710 |
| LmnI | GCTCC | 2 cut(s) | 554, 799 |
| Lsp1109I | GCAGC | 3 cut(s) | 457, 477, 698 |
| LweI | GCATC | 2 cut(s) | 1062, 1205 |
| MaeI | CTAG | 1 cut(s) | 1640 |
| MaeII | ACGT | 2 cut(s) | 519, 873 |
| MaeIII | GTNAC | 6 cut(s) | 118, 197, 217, 874, 923, 1172 |
| MflI | RGATCY | 3 cut(s) | 1330, 1516, 1540 |
| MhlI | GDGCHC | 1 cut(s) | 705 |
| MmeI | TCCRAC | 1 cut(s) | 597 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1187, 1310, 1373 |
| MseI | TTAA | 7 cut(s) | 99, 263, 588, 980, 1154, 1430, 1744 |
| MslI | CAYNNNNRTG | 3 cut(s) | 99, 195, 255 |
| MspA1I | CMGCKG | 1 cut(s) | 442 |
| MspR9I | CCNGG | 6 cut(s) | 171, 600, 798, 1142, 1508, 1614 |
| MvaI | CCWGG | 3 cut(s) | 171, 1142, 1614 |
| MvnI | CGCG | 4 cut(s) | 442, 752, 825, 1034 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 973 |
| NciI | CCSGG | 3 cut(s) | 600, 798, 1508 |
| NlaIII | CATG | 9 cut(s) | 260, 389, 402, 618, 790, 1086, 1351, 1457, 1730 |
| NlaIV | GGNNCC | 2 cut(s) | 1518, 1542 |
| NmuCI | GTSAC | 3 cut(s) | 197, 217, 874 |
| NruI | TCGCGA | 1 cut(s) | 1034 |
| NspI | RCATGY | 2 cut(s) | 389, 1457 |
| NspV | TTCGAA | 1 cut(s) | 1377 |
| OliI | CACNNNNGTG | 1 cut(s) | 195 |
| PaeI | GCATGC | 1 cut(s) | 389 |
| PagI | TCATGA | 2 cut(s) | 786, 1726 |
| PciI | ACATGT | 1 cut(s) | 1453 |
| PciSI | GCTCTTC | 1 cut(s) | 710 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 314, 705, 879, 989, 1031 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1187, 1310, 1373 |
| PfeI | GAWTC | 6 cut(s) | 348, 721, 915, 1188, 1311, 1441 |
| PfoI | TCCNGGA | 3 cut(s) | 169, 1140, 1612 |
| PinAI | ACCGGT | 3 cut(s) | 278, 766, 929 |
| PkrI | GCNGC | 6 cut(s) | 444, 447, 467, 688, 862, 1588 |
| PscI | ACATGT | 1 cut(s) | 1453 |
| Psp124BI | GAGCTC | 1 cut(s) | 705 |
| Psp6I | CCWGG | 3 cut(s) | 169, 1140, 1612 |
| PspFI | CCCAGC | 1 cut(s) | 557 |
| PspGI | CCWGG | 3 cut(s) | 169, 1140, 1612 |
| PspN4I | GGNNCC | 2 cut(s) | 1518, 1542 |
| PspPI | GGNCC | 5 cut(s) | 173, 276, 293, 602, 1691 |
| PsuI | RGATCY | 3 cut(s) | 1330, 1516, 1540 |
| RruI | TCGCGA | 1 cut(s) | 1034 |
| RsaI | GTAC | 4 cut(s) | 189, 1366, 1458, 1529 |
| RsaNI | GTAC | 4 cut(s) | 188, 1365, 1457, 1528 |
| RseI | CAYNNNNRTG | 3 cut(s) | 99, 195, 255 |
| Rsr2I | CGGWCCG | 1 cut(s) | 276 |
| RsrII | CGGWCCG | 1 cut(s) | 276 |
| SacI | GAGCTC | 1 cut(s) | 705 |
| SacII | CCGCGG | 1 cut(s) | 443 |
| SalI | GTCGAC | 2 cut(s) | 746, 991 |
| SapI | GCTCTTC | 1 cut(s) | 710 |
| SaqAI | TTAA | 7 cut(s) | 99, 263, 588, 980, 1154, 1430, 1744 |
| SatI | GCNGC | 6 cut(s) | 443, 446, 466, 687, 861, 1587 |
| Sau96I | GGNCC | 5 cut(s) | 173, 276, 293, 602, 1691 |
| ScrFI | CCNGG | 6 cut(s) | 171, 600, 798, 1142, 1508, 1614 |
| SduI | GDGCHC | 1 cut(s) | 705 |
| SfaNI | GCATC | 2 cut(s) | 1062, 1205 |
| SfcI | CTRYAG | 2 cut(s) | 714, 735 |
| Sfr303I | CCGCGG | 1 cut(s) | 443 |
| SfuI | TTCGAA | 1 cut(s) | 1377 |
| SgrBI | CCGCGG | 1 cut(s) | 443 |
| SinI | GGWCC | 4 cut(s) | 173, 276, 293, 1691 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 99, 195, 255 |
| SphI | GCATGC | 1 cut(s) | 389 |
| SspMI | CTAG | 1 cut(s) | 1640 |
| SstI | GAGCTC | 1 cut(s) | 705 |
| StyD4I | CCNGG | 6 cut(s) | 169, 598, 796, 1140, 1506, 1612 |
| TaaI | ACNGT | 8 cut(s) | 154, 181, 646, 736, 910, 997, 1172, 1634 |
| TaiI | ACGT | 2 cut(s) | 522, 876 |
| TaqII | GACCGA | 1 cut(s) | 190 |
| TatI | WGTACW | 2 cut(s) | 187, 1456 |
| TauI | GCSGC | 3 cut(s) | 445, 863, 1589 |
| TfiI | GAWTC | 6 cut(s) | 348, 721, 915, 1188, 1311, 1441 |
| Tru1I | TTAA | 7 cut(s) | 99, 263, 588, 980, 1154, 1430, 1744 |
| Tru9I | TTAA | 7 cut(s) | 99, 263, 588, 980, 1154, 1430, 1744 |
| TscAI | CASTG | 3 cut(s) | 1572, 1637, 1745 |
| TseFI | GTSAC | 3 cut(s) | 197, 217, 874 |
| TseI | GCWGC | 3 cut(s) | 445, 465, 686 |
| Tsp45I | GTSAC | 3 cut(s) | 197, 217, 874 |
| TspDTI | ATGAA | 7 cut(s) | 239, 418, 560, 761, 907, 1217, 1364 |
| TspGWI | ACGGA | 7 cut(s) | 174, 403, 871, 911, 943, 1140, 1476 |
| TspRI | CASTG | 3 cut(s) | 1572, 1637, 1745 |
| VpaK11BI | GGWCC | 4 cut(s) | 173, 276, 293, 1691 |
| XapI | RAATTY | 9 cut(s) | 7, 483, 848, 949, 1028, 1040, 1358, 1385, 1498 |
| XbaI | TCTAGA | 1 cut(s) | 1639 |
| XceI | RCATGY | 2 cut(s) | 389, 1457 |
| XmiI | GTMKAC | 4 cut(s) | 417, 648, 747, 992 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1187, 1310, 1373 |
| XspI | CTAG | 1 cut(s) | 1640 |