MD14G1234800.v1.1

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0017202
Physical Location & Seq
Reverse (-)
31472594 .. 31475024
2431 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1234800.v1.1.491

Sequence Viewer

Length: 1776 bp
ATGGAGAGTTTGAGCCAGCATTATAGATTAGTGCTAATTCTAATCATATTTGCGGTGGCTTTACCGTCATGTTTCTCGCAAACAACCCGACGCTTCGAGTTTAATGTAAGCTGGAGTGTCCACTCTTATTCTAGAGTAGTTGAGTGGAAGAATGTAACTCGTTTGTGCAACACAAAGCCACTTCTAACAGTGAATGGAGAGTATCCAGGGCCAACCATTGCTGTCTATGAAGGTGATCATCTCGAGATTAAGGTCACTAATCGCATTGCCGAAAATACCACCATCCATTGGCATGGTGTGAGGCAACTAAGAACAGGATGGGCAGACGGTCCAGCTTATATCACACAATGTCCTATAAGAGGTGGCAAGACCTACACATACAAGTTCACTGTGGAGTACCAAAGAGGCACTCTCTGGTGGCATGCTCATTTTGCCTGGCAACGAGCTTCCATTTATGGCGCTTTCGTCATCCATCCGCGCATGCCTTTTCCATTTTCCTCTCCGATTCAAGAAGAATTCCCCATCATCTTTGGTGAATGGTGGAATTCAGATGTAGGTGAAGTGGAAAATGAAATGAAGTATGGAGCTGGACCTAATAGTTCAGATGCTTATACCATCAATGGGTTGCCAGGACCATTCTATCCTTGCTCCGACAAAGATACCTTCATCAAAACTGTGGAACATGGAAAATCGTACTTGTTTAGAATTATCAACGCAGCACTCAACGATGAGCTTTTCTTTGCTGTGGCTAATCACACACTAACTGTTGTGGAGACTGATGCCGTGTACACCAAACCATTCACAACCTCAGCGATCATGGTAGGTCCTGGCCAAACCACCAACGTTTTGCTCACTGCAAATCAAGTCCCTGACTCCTCGGGTGCCTTTTTGATGGCGGCCTGGCCTTACCTCACCTCCGTTTTCCCTTTCGACAATTCCACCACAGCCGGTTTCTTGCGTTACAAGAACACAAAGAGTGACACAACCAAATATCCGCCAAAGGCTCCTAGTACTTTTGCACCGGAAAAATACAACCTCCCTAAAATGGAAGACACAAAGTTTGTCACTATATTTAATAACAAGCTCAGAAGCCTAGCCTCACCTAAGTATCCGTGCAACGTGCCTAAAACTGTCGACAAGCGTGTCGTTATGGTTATAAGCCTAAATCTCCAAGATTGTCCAGCCAATGAAACCTGCAAGGGTTATGCTGGCAAGAAATTTTTTGCTTCTATGAACAACCAGTCCTTCATTCGTCCCGCCCTGTCAATTTTAGAATCACATTACAAGAAGCTCAGAGGCGCCGAGTACTCCACAGATTTCCCAGAGAAACCTTTGAAGCCGTTTGATTACACTGGTGTGGATCCAGTTTCGGAGAACATGAACACGAAATTTGGCACTAAGATTATGGAAGTGGAGCATGGAACAAACTTAGAAATTGTGCTACAAGGTACAAGTTTTCTTAACACTGAGAACCATCCAATTCATTTGCATGGACACAACTTTTTTATAGTCGGTATGGGGTTTGGGAACTTCAATGCTGCCAAGGATCCGGCAAAGTACAACCTCATTGACCCTCCGGAGAGAAACACGGTGGCAGTTCCAACCGGAGGATGGGCGGCGATTCGATTCAAGGCCGACAATCCGGGAGTTTGGTTCATTCACTGTCACCTTGAAGAGCATACTTCGTGGGGTCTTGCCTCGGGGTTTATTGTCAAGAATGGTCCAAAACCGTCTCAGTGTGTGCTTCCTCCCCCTGACGATCTTCCCTTATGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

592

Amino Acids

66.45

Weight (kDa)

7.94

Isoelectric Point (pI)

30.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 47 - 160 2.1e-43 Multicopper oxidase
Cu-oxidase PF00394 171 - 323 6.6e-40 Multicopper oxidase
Cu-oxidase_2 PF07731 440 - 573 1.3e-42 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G18140
fragaria_vesca FvH4_5g17150
malus_domestica MD06G1230100.v1.1 MD14G1234800.v1.1
prunus_persica Prupe.5G231100_v2.0.a1
pyrus_communis pycom14g19580
rosa_chinensis RchiOBHm_Chr7g0178641
rosa_laevigata RLG00000005427
rosa_multiflora Rmu_sc0002320.1_g000007
rosa_rugosa Rorug06G0418700
rosa_samantha Rh7AG017400 Rh7BG017000
rosa_wichuraiana Rw7G001410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1157
AasI GACNNNNNNGTC 1 cut(s) 1142
Acc36I ACCTGC 1 cut(s) 1202
AccB1I GGYRCC 2 cut(s) 881, 1298
AccB7I CCANNNNNTGG 1 cut(s) 288
AccI GTMKAC 1 cut(s) 1134
AccII CGCG 1 cut(s) 478
AccIII TCCGGA 1 cut(s) 1576
AciI CCGC 6 cut(s) 53, 476, 896, 995, 1257, 1616
AclI AACGTT 1 cut(s) 843
AclWI GGATC 4 cut(s) 1355, 1368, 1541, 1554
AcoI YGGCCR 1 cut(s) 829
AcsI RAATTY 4 cut(s) 515, 544, 1217, 1388
AcyI GRCGYC 1 cut(s) 1299
AfaI GTAC 7 cut(s) 398, 695, 788, 1012, 1307, 1450, 1559
AfiI CCNNNNNNNGG 6 cut(s) 288, 359, 621, 1045, 1607, 1611
AgsI TTSAA 5 cut(s) 509, 1336, 1534, 1630, 1673
AjnI CCWGG 5 cut(s) 205, 434, 628, 826, 899
AleI CACNNNNGTG 1 cut(s) 1355
AloI GAACNNNNNNTCC 2 cut(s) 1226, 1258
AluBI AGCT 7 cut(s) 111, 335, 446, 587, 733, 1084, 1291
AluI AGCT 7 cut(s) 111, 335, 446, 587, 733, 1084, 1291
Alw26I GTCTC 2 cut(s) 767, 1737
AlwI GGATC 4 cut(s) 1355, 1368, 1541, 1554
Ama87I CYCGRG 3 cut(s) 242, 877, 1699
Aor13HI TCCGGA 1 cut(s) 1576
AoxI GGCC 5 cut(s) 209, 829, 897, 902, 1632
ApeKI GCWGC 2 cut(s) 716, 1538
ApoI RAATTY 4 cut(s) 515, 544, 1217, 1388
ArsI GACNNNNNNTTYG 2 cut(s) 1043, 1075
AspLEI GCGC 3 cut(s) 461, 480, 1301
AspS9I GGNCC 6 cut(s) 209, 329, 590, 632, 824, 1721
AsuC2I CCSGG 1 cut(s) 1644
AsuHPI GGTGA 6 cut(s) 245, 545, 569, 904, 1092, 1658
AvaI CYCGRG 3 cut(s) 242, 877, 1699
AvaII GGWCC 5 cut(s) 329, 590, 632, 824, 1721
BaeI ACNNNNGTAYC 2 cut(s) 1091, 1124
BalI TGGCCA 1 cut(s) 831
BamHI GGATCC 2 cut(s) 1360, 1546
BanI GGYRCC 2 cut(s) 881, 1298
BbsI GAAGAC 1 cut(s) 1056
BbvCI CCTCAGC 1 cut(s) 808
BbvI GCAGC 2 cut(s) 728, 1525
BccI CCATC 8 cut(s) 290, 312, 480, 530, 623, 886, 1482, 1605
BceAI ACGGC 2 cut(s) 767, 1324
BciT130I CCWGG 5 cut(s) 207, 436, 630, 828, 901
BciVI GTATCC 2 cut(s) 213, 1119
BclI TGATCA 1 cut(s) 235
BcnI CCSGG 1 cut(s) 1644
BcoDI GTCTC 2 cut(s) 767, 1737
BfaI CTAG 3 cut(s) 132, 1008, 1094
BfoI RGCGCY 2 cut(s) 462, 1302
BfuAI ACCTGC 1 cut(s) 1202
BfuI GTATCC 2 cut(s) 213, 1119
BisI GCNGC 4 cut(s) 717, 897, 1539, 1617
BlsI GCNGC 4 cut(s) 718, 898, 1540, 1618
BmcAI AGTACT 2 cut(s) 1012, 1307
Bme1390I CCNGG 6 cut(s) 207, 436, 630, 828, 901, 1644
Bme18I GGWCC 5 cut(s) 329, 590, 632, 824, 1721
BmeT110I CYCGRG 3 cut(s) 242, 877, 1699
BmgT120I GGNCC 6 cut(s) 209, 329, 590, 632, 824, 1721
BmiI GGNNCC 5 cut(s) 883, 1005, 1300, 1362, 1548
BmrFI CCNGG 6 cut(s) 207, 436, 630, 828, 901, 1644
BmsI GCATC 2 cut(s) 595, 769
BpiI GAAGAC 1 cut(s) 1056
BplI GAGNNNNNCTC 2 cut(s) 396, 428
BpmI CTGGAG 1 cut(s) 133
Bpu10I CCTNAGC 1 cut(s) 808
BpuMI CCSGG 1 cut(s) 1644
BsaHI GRCGYC 1 cut(s) 1299
BsaJI CCNNGG 4 cut(s) 206, 876, 1542, 1698
BsaWI WCCGGW 3 cut(s) 1021, 1576, 1604
BsaXI ACNNNNNCTCC 2 cut(s) 899, 929
Bsc4I CCNNNNNNNGG 6 cut(s) 288, 359, 621, 1045, 1607, 1611
Bse118I RCCGGY 1 cut(s) 947
Bse1I ACTGG 3 cut(s) 1240, 1357, 1364
Bse3DI GCAATG 2 cut(s) 216, 264
BseAI TCCGGA 1 cut(s) 1576
BseBI CCWGG 5 cut(s) 207, 436, 630, 828, 901
BseDI CCNNGG 4 cut(s) 206, 876, 1542, 1698
BseGI GGATG 6 cut(s) 282, 323, 468, 472, 1474, 1616
BseLI CCNNNNNNNGG 6 cut(s) 288, 359, 621, 1045, 1607, 1611
BseMI GCAATG 2 cut(s) 216, 264
BseMII CTCAG 5 cut(s) 822, 1099, 1306, 1458, 1748
BseNI ACTGG 3 cut(s) 1240, 1357, 1364
BseRI GAGGAG 1 cut(s) 865
BseXI GCAGC 2 cut(s) 728, 1525
Bsh1236I CGCG 1 cut(s) 478
BshFI GGCC 5 cut(s) 211, 831, 899, 904, 1634
BshNI GGYRCC 2 cut(s) 881, 1298
BsiHKCI CYCGRG 3 cut(s) 242, 877, 1699
BsiSI CCGG 6 cut(s) 948, 1022, 1550, 1577, 1605, 1643
BslFI GGGAC 2 cut(s) 851, 1239
BslI CCNNNNNNNGG 6 cut(s) 288, 359, 621, 1045, 1607, 1611
BsmAI GTCTC 2 cut(s) 767, 1737
BsmBI CGTCTC 1 cut(s) 1737
BsmFI GGGAC 2 cut(s) 851, 1239
BsnI GGCC 5 cut(s) 211, 831, 899, 904, 1634
BsoBI CYCGRG 3 cut(s) 242, 877, 1699
Bsp13I TCCGGA 1 cut(s) 1576
Bsp1407I TGTACA 1 cut(s) 786
Bsp143I GATC 5 cut(s) 235, 813, 1360, 1546, 1759
BspACI CCGC 6 cut(s) 53, 476, 896, 995, 1257, 1616
BspANI GGCC 5 cut(s) 211, 831, 899, 904, 1634
BspCNI CTCAG 5 cut(s) 821, 1098, 1305, 1459, 1747
BspEI TCCGGA 1 cut(s) 1576
BspFNI CGCG 1 cut(s) 478
BspLI GGNNCC 5 cut(s) 883, 1005, 1300, 1362, 1548
BspMI ACCTGC 1 cut(s) 1202
BspPI GGATC 4 cut(s) 1355, 1368, 1541, 1554
BspQI GCTCTTC 1 cut(s) 1668
BspT107I GGYRCC 2 cut(s) 881, 1298
BsrDI GCAATG 2 cut(s) 216, 264
BsrFI RCCGGY 1 cut(s) 947
BsrGI TGTACA 1 cut(s) 786
BsrI ACTGG 3 cut(s) 1240, 1357, 1364
BssAI RCCGGY 1 cut(s) 947
BssECI CCNNGG 4 cut(s) 206, 876, 1542, 1698
BssMI GATC 5 cut(s) 235, 813, 1360, 1546, 1759
BssNI GRCGYC 1 cut(s) 1299
BssT1I CCWWGG 1 cut(s) 1542
Bst2UI CCWGG 5 cut(s) 207, 436, 630, 828, 901
Bst6I CTCTTC 1 cut(s) 1668
BstACI GRCGYC 1 cut(s) 1299
BstAUI TGTACA 1 cut(s) 786
BstC8I GCNNGC 4 cut(s) 17, 423, 482, 1210
BstDEI CTNAG 9 cut(s) 308, 808, 1085, 1104, 1292, 1398, 1429, 1467, 1734
BstENI CCTNNNNNAGG 1 cut(s) 357
BstF5I GGATG 6 cut(s) 282, 323, 468, 472, 1474, 1616
BstFNI CGCG 1 cut(s) 478
BstH2I RGCGCY 2 cut(s) 462, 1302
BstHHI GCGC 3 cut(s) 461, 480, 1301
BstKTI GATC 5 cut(s) 238, 816, 1363, 1549, 1762
BstMAI GTCTC 2 cut(s) 767, 1737
BstMBI GATC 5 cut(s) 235, 813, 1360, 1546, 1759
BstMWI GCNNNNNNNGC 1 cut(s) 431
BstNI CCWGG 5 cut(s) 207, 436, 630, 828, 901
BstNSI RCATGY 2 cut(s) 425, 484
BstSCI CCNGG 6 cut(s) 205, 434, 628, 826, 899, 1642
BstUI CGCG 1 cut(s) 478
BstV1I GCAGC 2 cut(s) 728, 1525
BstV2I GAAGAC 1 cut(s) 1056
BstX2I RGATCY 2 cut(s) 1360, 1546
BstXI CCANNNNNNTGG 1 cut(s) 293
BstYI RGATCY 2 cut(s) 1360, 1546
BsuI GTATCC 2 cut(s) 213, 1119
BsuRI GGCC 5 cut(s) 211, 831, 899, 904, 1634
BtsCI GGATG 6 cut(s) 282, 323, 468, 472, 1474, 1616
BtsI GCAGTG 1 cut(s) 852
BtsIMutI CAGTG 7 cut(s) 195, 387, 852, 1350, 1464, 1660, 1742
BveI ACCTGC 1 cut(s) 1202
Cac8I GCNNGC 4 cut(s) 17, 423, 482, 1210
CfoI GCGC 3 cut(s) 461, 480, 1301
Cfr10I RCCGGY 1 cut(s) 947
Cfr13I GGNCC 6 cut(s) 209, 329, 590, 632, 824, 1721
CseI GACGC 1 cut(s) 99
Csp6I GTAC 7 cut(s) 397, 694, 787, 1011, 1306, 1449, 1558
CviAII CATG 9 cut(s) 69, 293, 422, 481, 683, 817, 1378, 1418, 1490
CviQI GTAC 7 cut(s) 397, 694, 787, 1011, 1306, 1449, 1558
DdeI CTNAG 9 cut(s) 308, 808, 1085, 1104, 1292, 1398, 1429, 1467, 1734
DinI GGCGCC 1 cut(s) 1300
DpnI GATC 5 cut(s) 237, 815, 1362, 1548, 1761
DpnII GATC 5 cut(s) 235, 813, 1360, 1546, 1759
DrdI GACNNNNNNGTC 1 cut(s) 1142
DseDI GACNNNNNNGTC 1 cut(s) 1142
EaeI YGGCCR 1 cut(s) 829
Eam1104I CTCTTC 1 cut(s) 1668
EarI CTCTTC 1 cut(s) 1668
EciI GGCGGA 1 cut(s) 984
Eco130I CCWWGG 1 cut(s) 1542
Eco47I GGWCC 5 cut(s) 329, 590, 632, 824, 1721
Eco88I CYCGRG 3 cut(s) 242, 877, 1699
EcoNI CCTNNNNNAGG 1 cut(s) 357
EcoO109I RGGNCCY 1 cut(s) 824
EcoRI GAATTC 2 cut(s) 515, 544
EcoRII CCWGG 5 cut(s) 205, 434, 628, 826, 899
EcoT14I CCWWGG 1 cut(s) 1542
EgeI GGCGCC 1 cut(s) 1300
EheI GGCGCC 1 cut(s) 1300
ErhI CCWWGG 1 cut(s) 1542
Esp3I CGTCTC 1 cut(s) 1737
FaeI CATG 9 cut(s) 72, 296, 425, 484, 686, 820, 1381, 1421, 1493
FaqI GGGAC 2 cut(s) 851, 1239
FatI CATG 9 cut(s) 68, 292, 421, 480, 682, 816, 1377, 1417, 1489
FauI CCCGC 1 cut(s) 1264
FbaI TGATCA 1 cut(s) 235
FblI GTMKAC 1 cut(s) 1134
Fnu4HI GCNGC 4 cut(s) 717, 897, 1539, 1617
FokI GGATG 6 cut(s) 269, 330, 455, 459, 1461, 1623
Fsp4HI GCNGC 4 cut(s) 717, 897, 1539, 1617
FspBI CTAG 3 cut(s) 132, 1008, 1094
GlaI GCGC 3 cut(s) 460, 479, 1300
GluI GCNGC 4 cut(s) 717, 897, 1539, 1617
GsuI CTGGAG 1 cut(s) 133
HaeII RGCGCY 2 cut(s) 462, 1302
HaeIII GGCC 5 cut(s) 211, 831, 899, 904, 1634
HapII CCGG 6 cut(s) 948, 1022, 1550, 1577, 1605, 1643
HgaI GACGC 1 cut(s) 99
HhaI GCGC 3 cut(s) 461, 480, 1301
Hin1I GRCGYC 1 cut(s) 1299
Hin1II CATG 9 cut(s) 72, 296, 425, 484, 686, 820, 1381, 1421, 1493
Hin6I GCGC 3 cut(s) 459, 478, 1299
HinP1I GCGC 3 cut(s) 459, 478, 1299
HincII GTYRAC 1 cut(s) 1135
HindII GTYRAC 1 cut(s) 1135
HinfI GANTC 5 cut(s) 505, 872, 1274, 1621, 1626
HpaII CCGG 6 cut(s) 948, 1022, 1550, 1577, 1605, 1643
HphI GGTGA 6 cut(s) 245, 545, 569, 904, 1092, 1658
Hpy166II GTNNAC 5 cut(s) 121, 387, 787, 789, 1135
Hpy188I TCNGA 7 cut(s) 504, 550, 604, 652, 1088, 1295, 1372
Hpy188III TCNNGA 6 cut(s) 132, 242, 244, 509, 1577, 1714
Hpy8I GTNNAC 5 cut(s) 121, 387, 787, 789, 1135
Hpy99I CGWCG 1 cut(s) 93
HpyAV CCTTC 3 cut(s) 224, 673, 1255
HpyCH4IV ACGT 2 cut(s) 843, 1119
HpyCH4V TGCA 6 cut(s) 168, 857, 1019, 1116, 1197, 1489
HpyF10VI GCNNNNNNNGC 1 cut(s) 431
HpyF3I CTNAG 9 cut(s) 308, 808, 1085, 1104, 1292, 1398, 1429, 1467, 1734
HpySE526I ACGT 2 cut(s) 843, 1119
Hsp92I GRCGYC 1 cut(s) 1299
Hsp92II CATG 9 cut(s) 72, 296, 425, 484, 686, 820, 1381, 1421, 1493
HspAI GCGC 3 cut(s) 459, 478, 1299
KasI GGCGCC 1 cut(s) 1298
Kpn2I TCCGGA 1 cut(s) 1576
Ksp22I TGATCA 1 cut(s) 235
Kzo9I GATC 5 cut(s) 235, 813, 1360, 1546, 1759
LguI GCTCTTC 1 cut(s) 1668
LmnI GCTCC 4 cut(s) 584, 653, 1009, 1414
Lsp1109I GCAGC 2 cut(s) 728, 1525
LweI GCATC 2 cut(s) 595, 769
MaeI CTAG 3 cut(s) 132, 1008, 1094
MaeII ACGT 2 cut(s) 843, 1119
MaeIII GTNAC 6 cut(s) 154, 253, 959, 977, 1063, 1664
MalI GATC 5 cut(s) 237, 815, 1362, 1548, 1761
MboI GATC 5 cut(s) 235, 813, 1360, 1546, 1759
MboII GAAGA 5 cut(s) 160, 524, 1061, 1685, 1754
MflI RGATCY 2 cut(s) 1360, 1546
MlsI TGGCCA 1 cut(s) 831
MluNI TGGCCA 1 cut(s) 831
Mly113I GGCGCC 1 cut(s) 1299
MlyI GAGTC 1 cut(s) 866
MmeI TCCRAC 2 cut(s) 675, 1625
Mox20I TGGCCA 1 cut(s) 831
MroI TCCGGA 1 cut(s) 1576
MscI TGGCCA 1 cut(s) 831
MseI TTAA 4 cut(s) 102, 249, 1074, 1461
MslI CAYNNNNRTG 3 cut(s) 291, 1355, 1488
Msp20I TGGCCA 1 cut(s) 831
MspI CCGG 6 cut(s) 948, 1022, 1550, 1577, 1605, 1643
MspR9I CCNGG 6 cut(s) 207, 436, 630, 828, 901, 1644
MvaI CCWGG 5 cut(s) 207, 436, 630, 828, 901
MvnI CGCG 1 cut(s) 478
MwoI GCNNNNNNNGC 1 cut(s) 431
NarI GGCGCC 1 cut(s) 1299
NciI CCSGG 1 cut(s) 1644
NdeII GATC 5 cut(s) 235, 813, 1360, 1546, 1759
NlaIII CATG 9 cut(s) 72, 296, 425, 484, 686, 820, 1381, 1421, 1493
NlaIV GGNNCC 5 cut(s) 883, 1005, 1300, 1362, 1548
NmeAIII GCCGAG 1 cut(s) 1327
NmuCI GTSAC 4 cut(s) 253, 977, 1063, 1664
NspI RCATGY 2 cut(s) 425, 484
OliI CACNNNNGTG 1 cut(s) 1355
PaeI GCATGC 2 cut(s) 425, 484
PaeR7I CTCGAG 1 cut(s) 242
PciSI GCTCTTC 1 cut(s) 1668
PfeI GAWTC 4 cut(s) 505, 1274, 1621, 1626
PflMI CCANNNNNTGG 1 cut(s) 288
PfoI TCCNGGA 1 cut(s) 1642
PkrI GCNGC 4 cut(s) 718, 898, 1540, 1618
PleI GAGTC 1 cut(s) 866
PluTI GGCGCC 1 cut(s) 1302
PpsI GAGTC 1 cut(s) 866
PpuMI RGGWCCY 1 cut(s) 824
PsiI TTATAA 1 cut(s) 1157
Psp1406I AACGTT 1 cut(s) 843
Psp5II RGGWCCY 1 cut(s) 824
Psp6I CCWGG 5 cut(s) 205, 434, 628, 826, 899
PspGI CCWGG 5 cut(s) 205, 434, 628, 826, 899
PspN4I GGNNCC 5 cut(s) 883, 1005, 1300, 1362, 1548
PspPI GGNCC 6 cut(s) 209, 329, 590, 632, 824, 1721
PspPPI RGGWCCY 1 cut(s) 824
PsuI RGATCY 2 cut(s) 1360, 1546
RsaI GTAC 7 cut(s) 398, 695, 788, 1012, 1307, 1450, 1559
RsaNI GTAC 7 cut(s) 397, 694, 787, 1011, 1306, 1449, 1558
RseI CAYNNNNRTG 3 cut(s) 291, 1355, 1488
SalI GTCGAC 1 cut(s) 1133
SapI GCTCTTC 1 cut(s) 1668
SaqAI TTAA 4 cut(s) 102, 249, 1074, 1461
SatI GCNGC 4 cut(s) 717, 897, 1539, 1617
Sau3AI GATC 5 cut(s) 235, 813, 1360, 1546, 1759
Sau96I GGNCC 6 cut(s) 209, 329, 590, 632, 824, 1721
ScaI AGTACT 2 cut(s) 1012, 1307
SchI GAGTC 1 cut(s) 866
ScrFI CCNGG 6 cut(s) 207, 436, 630, 828, 901, 1644
SfaNI GCATC 2 cut(s) 595, 769
SfoI GGCGCC 1 cut(s) 1300
Sfr274I CTCGAG 1 cut(s) 242
SinI GGWCC 5 cut(s) 329, 590, 632, 824, 1721
SlaI CTCGAG 1 cut(s) 242
SmiMI CAYNNNNRTG 3 cut(s) 291, 1355, 1488
SmlI CTYRAG 1 cut(s) 242
SmoI CTYRAG 1 cut(s) 242
SphI GCATGC 2 cut(s) 425, 484
SsiI CCGC 6 cut(s) 53, 476, 896, 995, 1257, 1616
SspDI GGCGCC 1 cut(s) 1298
SspMI CTAG 3 cut(s) 132, 1008, 1094
StyD4I CCNGG 6 cut(s) 205, 434, 628, 826, 899, 1642
StyI CCWWGG 1 cut(s) 1542
TaiI ACGT 2 cut(s) 846, 1122
TaqI TCGA 5 cut(s) 96, 243, 930, 1134, 1624
TatI WGTACW 4 cut(s) 786, 1010, 1305, 1557
TauI GCSGC 2 cut(s) 899, 1619
TfiI GAWTC 4 cut(s) 505, 1274, 1621, 1626
Tru1I TTAA 4 cut(s) 102, 249, 1074, 1461
Tru9I TTAA 4 cut(s) 102, 249, 1074, 1461
TscAI CASTG 7 cut(s) 195, 394, 859, 1357, 1471, 1667, 1742
TseFI GTSAC 4 cut(s) 253, 977, 1063, 1664
TseI GCWGC 2 cut(s) 716, 1538
Tsp45I GTSAC 4 cut(s) 253, 977, 1063, 1664
TspGWI ACGGA 2 cut(s) 907, 1101
TspRI CASTG 7 cut(s) 195, 394, 859, 1357, 1471, 1667, 1742
Van91I CCANNNNNTGG 1 cut(s) 288
VpaK11BI GGWCC 5 cut(s) 329, 590, 632, 824, 1721
XagI CCTNNNNNAGG 1 cut(s) 357
XapI RAATTY 4 cut(s) 515, 544, 1217, 1388
XbaI TCTAGA 1 cut(s) 131
XceI RCATGY 2 cut(s) 425, 484
XcmI CCANNNNNNNNNTGG 1 cut(s) 1608
XhoI CTCGAG 1 cut(s) 242
XmiI GTMKAC 1 cut(s) 1134
XspI CTAG 3 cut(s) 132, 1008, 1094
ZrmI AGTACT 2 cut(s) 1012, 1307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.