Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010185

Physical Location & Seq

Genomic Coordinates Reverse (-)

6316695 .. 6319427

Gene Structure 2733 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G18360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1149 bp

ATGATCTGTTCAAGTAAAGGAACGGTCGTAATTGCTACTAGAAGCTCATTTCCCAGATTACTAAACCGGATTCAAAATCGAAATGATGTTCCGATTAGTGTCATAGCTACTCGACGATCATCAATGTCGGTGGAGGCGTTTCCGATGAGGTTAAAATCATCACAGAAGAAGAGGAAGATGAACATTGGTTGCGGTGTTTCCCCTTCTTCGCCGACGACGACGGTGGTAGATGAGGAAGTAGCCATTAGGCGGAAATTGGCAATGAGACGGGTTTTGGAGGATAACGGTGGCGATGGAAGCTCCGTCAGAGATTTCTCGCTATTCACGACCAAGAGAGGTGACACGTTGTTCACTCAGTCATGGACTCCTGTTGACTCCGCTAAGAACAGGGGACTTGTTGTTCTGCTTCATGGTCTGAACGAACACAGTGGCAGGTATAGTGATTTTGCAAAGCAGCTAAATGTAAATGGATTCAAGGTCTATGGAATAGATTGGATCGGTCATGGTGGAAGCGATGGACTTCATGCTTACGTTCCTTCTCTTGATTATGCTGTCGCTGATTTGAAATCGTTTATTGAGAAGGTAATTGCGGAAAACCCGGGATTGCCCTGTTTCTGCATTGGCCACTCAACAGGAGGAGCCATCATCTTAAAGGCTATGCTAGATGCAAAGATTGAAGCTCGAGTTTCAGGGATTGTGCTAACTTCACCCGCAGTTGGAGTCCAACCAACTTATCCTATCTTCGGCGTAATTGCACCATTCCTCTCGTTCCTCATACCGAGATATCAGTTAAGTGCTGCGAAAAAGAAAATAATGCCGGTTTCTCGTGACCCGGAAGCTCTATTGGCTAAATACTCTGACCCGCTAGTCTACACTGGATTTATCCGAGCAAGAACCGGTAACGAGATCCTTAGACTTGGTGCTCATTTACTGCAGAATCTGAACAGAATCAAGGTTCCGTTTCTTGTGATGCACGGCACAGCTGATACAGTTACTGATCCTAAAGGTACTCAGAAGCTATACAATGAGGCTTCCTCATCCGATAAGTCGATCAAGCTGTACGACGGGTTGTTACACGATCTGCTCTTTGAACCAGAACGGGAAACTATAGCTGGAGTCATATTGGATTGGCTAAACCGGCGGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 ko04714 ko04723 ko04923 map00561 map01100 map04714 map04723 map04923

Pfam Domains

Protein Families

Hydrolase_4

Protein Analysis

382

Amino Acids

41.96

Weight (kDa)

9.62

Isoelectric Point (pI)

40.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase_4	PF12146	128 - 366	2.4e-77	Serine aminopeptidase, S33
Abhydrolase_1	PF00561	132 - 242	3.7e-16	alpha/beta hydrolase fold
Abhydrolase_6	PF12697	133 - 339	4.7e-15	Alpha/beta hydrolase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18360 AT1G73480
fragaria_vesca	FvH4_5g17790
malus_domestica	MD06G1233800.v1.1 MD14G1240600.v1.1
prunus_persica	Prupe.5G238400_v2.0.a1 Prupe.5G238400_v2.0.a1 Prupe.5G238400_v2.0.a1 Prupe.5G238400_v2.0.a1
pyrus_communis	pycom06g20840 pycom14g20210
rosa_chinensis	RchiOBHm_Chr7g0177791
rosa_laevigata	RLG00000005503
rosa_multiflora	Rmu_sc0006214.1_g000012
rosa_roxburghii	Rroxscaffold_3G00275550
rosa_rugosa	Rorug06G0409400
rosa_samantha	Rh7AG009200 Rh7BG009300 Rh7CG009400 Rh7DG009300
rosa_wichuraiana	Rw7G000760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	866
Acc36I	ACCTGC	1 cut(s)	423
AccI	GTMKAC	1 cut(s)	870
AciI	CCGC	7 cut(s)	192, 250, 378, 590, 711, 863, 1141
AclWI	GGATC	3 cut(s)	503, 901, 992
AcoI	YGGCCR	1 cut(s)	622
AfaI	GTAC	2 cut(s)	1009, 1061
AfiI	CCNNNNNNNGG	3 cut(s)	249, 716, 743
AflIII	ACRYGT	1 cut(s)	342
AgeI	ACCGGT	1 cut(s)	896
AgsI	TTSAA	6 cut(s)	12, 74, 475, 565, 677, 1091
AloI	GAACNNNNNNTCC	2 cut(s)	384, 416
Alw21I	GWGCWC	1 cut(s)	925
Alw26I	GTCTC	1 cut(s)	259
AlwI	GGATC	3 cut(s)	503, 901, 992
AlwNI	CAGNNNCTG	2 cut(s)	940, 995
Ama87I	CYCGRG	2 cut(s)	598, 681
AoxI	GGCC	1 cut(s)	622
ApeKI	GCWGC	2 cut(s)	454, 797
AsiGI	ACCGGT	1 cut(s)	896
AsuC2I	CCSGG	3 cut(s)	599, 600, 833
AsuHPI	GGTGA	2 cut(s)	350, 699
AvaI	CYCGRG	2 cut(s)	598, 681
BalI	TGGCCA	1 cut(s)	624
BauI	CACGAG	1 cut(s)	825
Bbv12I	GWGCWC	1 cut(s)	925
BbvI	GCAGC	2 cut(s)	466, 784
BccI	CCATC	3 cut(s)	287, 509, 650
BceAI	ACGGC	1 cut(s)	991
BcnI	CCSGG	3 cut(s)	599, 600, 833
BcoDI	GTCTC	1 cut(s)	259
BfaI	CTAG	3 cut(s)	39, 662, 866
BfmI	CTRYAG	2 cut(s)	932, 1107
BfuAI	ACCTGC	1 cut(s)	423
BisI	GCNGC	2 cut(s)	455, 798
BlsI	GCNGC	2 cut(s)	456, 799
Bme1390I	CCNGG	3 cut(s)	599, 600, 833
BmeT110I	CYCGRG	2 cut(s)	598, 681
BmiI	GGNNCC	2 cut(s)	640, 957
BmrFI	CCNGG	3 cut(s)	599, 600, 833
BmsI	GCATC	2 cut(s)	655, 960
BplI	GAGNNNNNCTC	2 cut(s)	1019, 1051
BpmI	CTGGAG	1 cut(s)	1134
BpuMI	CCSGG	3 cut(s)	599, 600, 833
BsaJI	CCNNGG	1 cut(s)	598
BsaWI	WCCGGW	2 cut(s)	66, 896
Bsc4I	CCNNNNNNNGG	3 cut(s)	249, 716, 743
Bse118I	RCCGGY	3 cut(s)	817, 896, 1137
Bse1I	ACTGG	1 cut(s)	880
Bse3DI	GCAATG	1 cut(s)	267
BseDI	CCNNGG	1 cut(s)	598
BseGI	GGATG	1 cut(s)	1037
BseLI	CCNNNNNNNGG	3 cut(s)	249, 716, 743
BseMI	GCAATG	1 cut(s)	267
BseMII	CTCAG	2 cut(s)	368, 1025
BseNI	ACTGG	1 cut(s)	880
BseRI	GAGGAG	1 cut(s)	651
BseXI	GCAGC	2 cut(s)	466, 784
Bsh1285I	CGRYCG	1 cut(s)	27
BshFI	GGCC	1 cut(s)	624
BshTI	ACCGGT	1 cut(s)	896
BsiEI	CGRYCG	1 cut(s)	27
BsiHKAI	GWGCWC	1 cut(s)	925
BsiHKCI	CYCGRG	2 cut(s)	598, 681
BsiSI	CCGG	6 cut(s)	67, 599, 818, 833, 897, 1138
BslFI	GGGAC	1 cut(s)	405
BslI	CCNNNNNNNGG	3 cut(s)	249, 716, 743
BsmAI	GTCTC	1 cut(s)	259
BsmBI	CGTCTC	1 cut(s)	259
BsmFI	GGGAC	1 cut(s)	405
BsnI	GGCC	1 cut(s)	624
BsoBI	CYCGRG	2 cut(s)	598, 681
Bsp1286I	GDGCHC	1 cut(s)	925
Bsp143I	GATC	7 cut(s)	3, 116, 495, 906, 997, 1050, 1078
BspACI	CCGC	7 cut(s)	192, 250, 378, 590, 711, 863, 1141
BspANI	GGCC	1 cut(s)	624
BspCNI	CTCAG	2 cut(s)	367, 1024
BspLI	GGNNCC	2 cut(s)	640, 957
BspMAI	CTGCAG	1 cut(s)	936
BspMI	ACCTGC	1 cut(s)	423
BspPI	GGATC	3 cut(s)	503, 901, 992
BsrDI	GCAATG	1 cut(s)	267
BsrFI	RCCGGY	3 cut(s)	817, 896, 1137
BsrI	ACTGG	1 cut(s)	880
BssAI	RCCGGY	3 cut(s)	817, 896, 1137
BssECI	CCNNGG	1 cut(s)	598
BssMI	GATC	7 cut(s)	3, 116, 495, 906, 997, 1050, 1078
BssSI	CACGAG	1 cut(s)	825
Bst2BI	CACGAG	1 cut(s)	825
Bst4CI	ACNGT	5 cut(s)	25, 223, 287, 428, 991
Bst6I	CTCTTC	1 cut(s)	164
BstDEI	CTNAG	4 cut(s)	354, 381, 911, 1011
BstF5I	GGATG	1 cut(s)	1037
BstKTI	GATC	7 cut(s)	6, 119, 498, 909, 1000, 1053, 1081
BstMAI	GTCTC	1 cut(s)	259
BstMBI	GATC	7 cut(s)	3, 116, 495, 906, 997, 1050, 1078
BstMCI	CGRYCG	1 cut(s)	27
BstMWI	GCNNNNNNNGC	3 cut(s)	297, 845, 1138
BstSCI	CCNGG	3 cut(s)	597, 598, 831
BstSFI	CTRYAG	2 cut(s)	932, 1107
BstV1I	GCAGC	2 cut(s)	466, 784
BstX2I	RGATCY	1 cut(s)	906
BstYI	RGATCY	1 cut(s)	906
BsuRI	GGCC	1 cut(s)	624
BtgZI	GCGATG	2 cut(s)	306, 528
BtsCI	GGATG	1 cut(s)	1037
BtsIMutI	CAGTG	2 cut(s)	433, 873
BveI	ACCTGC	1 cut(s)	423
CaiI	CAGNNNCTG	2 cut(s)	940, 995
Cfr10I	RCCGGY	3 cut(s)	817, 896, 1137
Cfr9I	CCCGGG	1 cut(s)	598
Csp6I	GTAC	2 cut(s)	1008, 1060
CspAI	ACCGGT	1 cut(s)	896
CspCI	CAANNNNNGTGG	2 cut(s)	111, 146
CviAII	CATG	4 cut(s)	360, 410, 503, 524
CviQI	GTAC	2 cut(s)	1008, 1060
DdeI	CTNAG	4 cut(s)	354, 381, 911, 1011
DpnI	GATC	7 cut(s)	5, 118, 497, 908, 999, 1052, 1080
DpnII	GATC	7 cut(s)	3, 116, 495, 906, 997, 1050, 1078
DrdI	GACNNNNNNGTC	1 cut(s)	866
DseDI	GACNNNNNNGTC	1 cut(s)	866
EaeI	YGGCCR	1 cut(s)	622
Eam1104I	CTCTTC	1 cut(s)	164
EarI	CTCTTC	1 cut(s)	164
EciI	GGCGGA	1 cut(s)	265
Eco32I	GATATC	1 cut(s)	785
Eco88I	CYCGRG	2 cut(s)	598, 681
EcoRV	GATATC	1 cut(s)	785
Esp3I	CGTCTC	1 cut(s)	259
FaeI	CATG	4 cut(s)	363, 413, 506, 527
FaqI	GGGAC	1 cut(s)	405
FatI	CATG	4 cut(s)	359, 409, 502, 523
FauI	CCCGC	3 cut(s)	718, 870, 1134
FblI	GTMKAC	1 cut(s)	870
Fnu4HI	GCNGC	2 cut(s)	455, 798
FokI	GGATG	1 cut(s)	1024
Fsp4HI	GCNGC	2 cut(s)	455, 798
FspBI	CTAG	3 cut(s)	39, 662, 866
GluI	GCNGC	2 cut(s)	455, 798
GsuI	CTGGAG	1 cut(s)	1134
HaeIII	GGCC	1 cut(s)	624
HapII	CCGG	6 cut(s)	67, 599, 818, 833, 897, 1138
Hin1II	CATG	4 cut(s)	363, 413, 506, 527
HincII	GTYRAC	1 cut(s)	373
HindII	GTYRAC	1 cut(s)	373
HinfI	GANTC	8 cut(s)	70, 364, 374, 471, 720, 937, 948, 1116
HpaII	CCGG	6 cut(s)	67, 599, 818, 833, 897, 1138
HphI	GGTGA	2 cut(s)	350, 699
Hpy166II	GTNNAC	3 cut(s)	351, 373, 871
Hpy188I	TCNGA	9 cut(s)	93, 144, 308, 417, 859, 887, 942, 1014, 1042
Hpy188III	TCNNGA	3 cut(s)	325, 542, 827
Hpy8I	GTNNAC	3 cut(s)	351, 373, 871
Hpy99I	CGWCG	5 cut(s)	117, 217, 220, 223, 1067
HpyAV	CCTTC	3 cut(s)	213, 546, 574
HpyCH4III	ACNGT	5 cut(s)	25, 223, 287, 428, 991
HpyCH4IV	ACGT	2 cut(s)	344, 531
HpyCH4V	TGCA	6 cut(s)	449, 618, 668, 755, 934, 973
HpyF10VI	GCNNNNNNNGC	3 cut(s)	297, 845, 1138
HpyF3I	CTNAG	4 cut(s)	354, 381, 911, 1011
HpySE526I	ACGT	2 cut(s)	344, 531
Hsp92II	CATG	4 cut(s)	363, 413, 506, 527
Kzo9I	GATC	7 cut(s)	3, 116, 495, 906, 997, 1050, 1078
LmnI	GCTCC	2 cut(s)	305, 638
Lsp1109I	GCAGC	2 cut(s)	466, 784
LweI	GCATC	2 cut(s)	655, 960
MaeI	CTAG	3 cut(s)	39, 662, 866
MaeII	ACGT	2 cut(s)	344, 531
MaeIII	GTNAC	5 cut(s)	338, 827, 899, 991, 1071
MalI	GATC	7 cut(s)	5, 118, 497, 908, 999, 1052, 1080
MboI	GATC	7 cut(s)	3, 116, 495, 906, 997, 1050, 1078
MboII	GAAGA	5 cut(s)	178, 181, 187, 198, 733
MflI	RGATCY	1 cut(s)	906
MhlI	GDGCHC	1 cut(s)	925
MlsI	TGGCCA	1 cut(s)	624
MluCI	AATT	4 cut(s)	30, 254, 585, 750
MluNI	TGGCCA	1 cut(s)	624
MlyI	GAGTC	4 cut(s)	358, 368, 729, 1125
MmeI	TCCRAC	2 cut(s)	697, 748
Mox20I	TGGCCA	1 cut(s)	624
MscI	TGGCCA	1 cut(s)	624
MseI	TTAA	4 cut(s)	152, 650, 791, 1147
Msp20I	TGGCCA	1 cut(s)	624
MspA1I	CMGCKG	1 cut(s)	983
MspI	CCGG	6 cut(s)	67, 599, 818, 833, 897, 1138
MspR9I	CCNGG	3 cut(s)	599, 600, 833
MwoI	GCNNNNNNNGC	3 cut(s)	297, 845, 1138
NciI	CCSGG	3 cut(s)	599, 600, 833
NdeII	GATC	7 cut(s)	3, 116, 495, 906, 997, 1050, 1078
NlaIII	CATG	4 cut(s)	363, 413, 506, 527
NlaIV	GGNNCC	2 cut(s)	640, 957
NmuCI	GTSAC	2 cut(s)	338, 827
PaeR7I	CTCGAG	1 cut(s)	681
PcsI	WCGNNNNNNNCGW	3 cut(s)	134, 215, 323
PfeI	GAWTC	4 cut(s)	70, 471, 937, 948
PinAI	ACCGGT	1 cut(s)	896
PkrI	GCNGC	2 cut(s)	456, 799
PleI	GAGTC	4 cut(s)	358, 368, 728, 1124
PpsI	GAGTC	4 cut(s)	358, 368, 728, 1124
PspN4I	GGNNCC	2 cut(s)	640, 957
PspXI	VCTCGAGB	1 cut(s)	681
PstI	CTGCAG	1 cut(s)	936
PstNI	CAGNNNCTG	2 cut(s)	940, 995
PsuI	RGATCY	1 cut(s)	906
PvuII	CAGCTG	1 cut(s)	983
RsaI	GTAC	2 cut(s)	1009, 1061
RsaNI	GTAC	2 cut(s)	1008, 1060
SaqAI	TTAA	4 cut(s)	152, 650, 791, 1147
SatI	GCNGC	2 cut(s)	455, 798
Sau3AI	GATC	7 cut(s)	3, 116, 495, 906, 997, 1050, 1078
SchI	GAGTC	4 cut(s)	358, 368, 729, 1125
ScrFI	CCNGG	3 cut(s)	599, 600, 833
SduI	GDGCHC	1 cut(s)	925
SfaNI	GCATC	2 cut(s)	655, 960
SfcI	CTRYAG	2 cut(s)	932, 1107
Sfr274I	CTCGAG	1 cut(s)	681
SlaI	CTCGAG	1 cut(s)	681
SmaI	CCCGGG	1 cut(s)	600
SmlI	CTYRAG	1 cut(s)	681
SmoI	CTYRAG	1 cut(s)	681
Sse9I	AATT	4 cut(s)	30, 254, 585, 750
SsiI	CCGC	7 cut(s)	192, 250, 378, 590, 711, 863, 1141
SspMI	CTAG	3 cut(s)	39, 662, 866
StyD4I	CCNGG	3 cut(s)	597, 598, 831
TaaI	ACNGT	5 cut(s)	25, 223, 287, 428, 991
TaiI	ACGT	2 cut(s)	347, 534
TaqI	TCGA	4 cut(s)	79, 112, 682, 1049
TaqII	GACCGA	1 cut(s)	488
TasI	AATT	4 cut(s)	30, 254, 585, 750
TfiI	GAWTC	4 cut(s)	70, 471, 937, 948
Tru1I	TTAA	4 cut(s)	152, 650, 791, 1147
Tru9I	TTAA	4 cut(s)	152, 650, 791, 1147
TscAI	CASTG	2 cut(s)	433, 880
TseFI	GTSAC	2 cut(s)	338, 827
TseI	GCWGC	2 cut(s)	454, 797
Tsp45I	GTSAC	2 cut(s)	338, 827
TspDTI	ATGAA	3 cut(s)	194, 398, 512
TspGWI	ACGGA	2 cut(s)	292, 948
TspMI	CCCGGG	1 cut(s)	598
TspRI	CASTG	2 cut(s)	433, 880
XhoI	CTCGAG	1 cut(s)	681
XmaI	CCCGGG	1 cut(s)	598
XmiI	GTMKAC	1 cut(s)	870
XspI	CTAG	3 cut(s)	39, 662, 866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.