Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0010185

Physical Location & Seq

Genomic Coordinates Reverse (-)

764020 .. 768250

Gene Structure 4231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG009300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1404 bp

ATGAGCTGTGTGAGAACAGCAGGGACGGAGAGGATATTATTAGAGCCTGGAATCCCCGCTAAGAACAGCAATAGACCTAAATTAGGGTTCAGAGGAGCAGGAGCGGAATTCGCATTCTATTCATCGACTCCGGCATCGGCATCGCTGCGAGCTAGGAGGAGGAGGACAACCGGAGGAGGCTTCCGAACGAGACACGTGGAGGTTTCCATTATGGCGACGGCGTCCCCGCCGTCTCTGCTTTTGACTTCCGGCGCCAGCGGCCGCATAAGCGCCTTGTTCTCGCTCCGAGCAATGCGGAGTCTGATGATGCTGATCAACGCCTTCTTCCTGCTCCTCCTGCTGCCTTTCCGCGGCCGCAAGCCGTTGTCCTCGTCGGAGAAATTGTCCGAGGACGAGAATAAGCAGAGGGGGCCGGTGGTGCGCGTGCCGGCTACCATCGTGCACTGGAAGAGCAGCAGCAACAGCAACAGCTCCAGCTCGCCGCCCCCCCTCGATCATGACGTGGCGGCCAGGAGAGCGTTGGCGAAGCTGAGAGTCAGGCAGGACGATGATCAGAATTCGGTCAGGCAATTTTCGATTTTCGCCACCACCCGAGGGGAAACTCTTTTCACCCAAACCTGGACTCCCGTTTCGGTTAACATCAGGGGTGTTGTCATTCTTATGCACGGCCTGAATGAACACAGTGGCAGATACAGTGGTTTTGCAAAGCAGCTGAATGCTAATGGTTTCAAGGTTTACGGAATGGATTGGATTGGTCATGGTGGGAGTGATGGGCTTCATGCGTATGTTCCTTCTCTTGATTTTGCTGTTGCTGATATGAAATCATATATTGAAAAGGTTGTAGCCGAAAATCCTGGCTTACCTTGTTTTTGTTTTGGACACTCCACAGGTGCAGCCATTATCCTCAAGGCAATGCTTGACCCAAAAGTTGAGGCCTGCATAGATGGTGTGGTGCTTACATCACCTGCAGTTGGGGTTCAGCCTTCGCACCCAATATTTGTGATACTTGCTCCAGTCATTGCATTTTTGATGCCGAGATATCAACTCAGTGCGGCAAATAAGACAGGCATTGCAGTTTCTCGGGACCCTGCAGCGCTGGCTGCCAAGTATTCAGACCCCCTAGTGTACACTGGAGCCATCCGTGTGAGGACTGGTTATGAAATTCTTCGAATCACATCCTACTTGCAGCAGAATCTTAGCAAGATGAAAGTCCCCTTTCTGGTTCTCCATGGCACAGCTGACACTGTTACTGATCCTGGGGCCACACAGAAACTGTACGACGAAGCCTCCTCAACTGACAAAACCATCACATTGTATGATGGGTTATTACATGACCTCCTCTTTGAACCAGAACGAGAAGCTATTTTGAAGCAAATAATAGATTGGTTGAATCATAGAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 ko04714 ko04723 ko04923 map00561 map01100 map04714 map04723 map04923

Pfam Domains

Protein Families

Hydrolase_4

Protein Analysis

467

Amino Acids

50.91

Weight (kDa)

9.69

Isoelectric Point (pI)

43.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase_4	PF12146	214 - 451	1.6e-76	Serine aminopeptidase, S33
Abhydrolase_1	PF00561	217 - 347	2.6e-13	alpha/beta hydrolase fold
Abhydrolase_6	PF12697	218 - 444	8.9e-12	Alpha/beta hydrolase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18360 AT1G73480
fragaria_vesca	FvH4_5g17790
malus_domestica	MD06G1233800.v1.1 MD14G1240600.v1.1
prunus_persica	Prupe.5G238400_v2.0.a1 Prupe.5G238400_v2.0.a1 Prupe.5G238400_v2.0.a1 Prupe.5G238400_v2.0.a1
pyrus_communis	pycom06g20840 pycom14g20210
rosa_chinensis	RchiOBHm_Chr7g0177791
rosa_laevigata	RLG00000005503
rosa_multiflora	Rmu_sc0006214.1_g000012
rosa_roxburghii	Rroxscaffold_3G00275550
rosa_rugosa	Rorug06G0409400
rosa_samantha	Rh7AG009200 Rh7BG009300 Rh7CG009400 Rh7DG009300
rosa_wichuraiana	Rw7G000760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	973
Acc36I	ACCTGC	1 cut(s)	973
AccB1I	GGYRCC	1 cut(s)	251
AccBSI	CCGCTC	1 cut(s)	104
AccII	CGCG	2 cut(s)	351, 423
AclWI	GGATC	1 cut(s)	1247
AcoI	YGGCCR	3 cut(s)	259, 352, 507
AcsI	RAATTY	3 cut(s)	107, 556, 1161
AcvI	CACGTG	1 cut(s)	196
AcyI	GRCGYC	2 cut(s)	221, 252
AfaI	GTAC	2 cut(s)	1127, 1277
AfeI	AGCGCT	1 cut(s)	1095
AfiI	CCNNNNNNNGG	6 cut(s)	83, 350, 594, 618, 971, 1219
AflIII	ACRYGT	1 cut(s)	193
AgsI	TTSAA	5 cut(s)	730, 833, 1346, 1369, 1390
AjiI	CACGTC	1 cut(s)	502
AjnI	CCWGG	5 cut(s)	46, 509, 617, 853, 1255
AluBI	AGCT	8 cut(s)	6, 152, 471, 477, 529, 712, 1238, 1361
AluI	AGCT	8 cut(s)	6, 152, 471, 477, 529, 712, 1238, 1361
Alw21I	GWGCWC	1 cut(s)	444
Alw26I	GTCTC	2 cut(s)	184, 237
Alw44I	GTGCAC	1 cut(s)	440
AlwI	GGATC	1 cut(s)	1247
AlwNI	CAGNNNCTG	1 cut(s)	1273
Ama87I	CYCGRG	2 cut(s)	591, 1080
Aor51HI	AGCGCT	1 cut(s)	1095
AoxI	GGCC	7 cut(s)	259, 352, 410, 507, 667, 933, 1260
ApaLI	GTGCAC	1 cut(s)	440
ApeKI	GCWGC	9 cut(s)	145, 340, 453, 456, 709, 893, 1091, 1100, 1186
ApoI	RAATTY	3 cut(s)	107, 556, 1161
ArsI	GACNNNNNNTTYG	4 cut(s)	613, 645, 1325, 1357
Asp700I	GAANNNNTTC	1 cut(s)	1164
AspLEI	GCGC	4 cut(s)	254, 272, 423, 1096
AspS9I	GGNCC	3 cut(s)	410, 1084, 1260
AsuHPI	GGTGA	2 cut(s)	601, 954
AsuII	TTCGAA	1 cut(s)	1168
AvaI	CYCGRG	2 cut(s)	591, 1080
AvaII	GGWCC	1 cut(s)	1084
BaeGI	GKGCMC	1 cut(s)	444
BaeI	ACNNNNGTAYC	2 cut(s)	682, 715
BanI	GGYRCC	1 cut(s)	251
BbrPI	CACGTG	1 cut(s)	196
Bbv12I	GWGCWC	1 cut(s)	444
BbvI	GCAGC	9 cut(s)	132, 327, 465, 468, 721, 905, 1087, 1103, 1198
BccI	CCATC	6 cut(s)	443, 764, 938, 1145, 1313, 1313
BceAI	ACGGC	4 cut(s)	214, 234, 346, 682
BcgI	CGANNNNNNTGC	2 cut(s)	123, 157
BciT130I	CCWGG	5 cut(s)	48, 511, 619, 855, 1257
BclI	TGATCA	2 cut(s)	312, 550
BcoDI	GTCTC	2 cut(s)	184, 237
BfaI	CTAG	2 cut(s)	153, 1121
BfmI	CTRYAG	2 cut(s)	966, 1089
BfoI	RGCGCY	3 cut(s)	255, 273, 1097
BfuAI	ACCTGC	1 cut(s)	973
Bme1390I	CCNGG	5 cut(s)	48, 511, 619, 855, 1257
Bme18I	GGWCC	1 cut(s)	1084
BmeT110I	CYCGRG	2 cut(s)	591, 1080
BmgBI	CACGTC	1 cut(s)	502
BmgT120I	GGNCC	3 cut(s)	410, 1084, 1260
BmiI	GGNNCC	6 cut(s)	253, 411, 1085, 1086, 1135, 1261
BmrFI	CCNGG	5 cut(s)	48, 511, 619, 855, 1257
BmsI	GCATC	4 cut(s)	143, 149, 297, 1020
BpmI	CTGGAG	3 cut(s)	457, 996, 1152
Bpu14I	TTCGAA	1 cut(s)	1168
BpuEI	CTTGAG	1 cut(s)	890
BsaAI	YACGTR	1 cut(s)	196
BsaBI	GATNNNNATC	1 cut(s)	311
BsaHI	GRCGYC	2 cut(s)	221, 252
BsaJI	CCNNGG	5 cut(s)	349, 387, 592, 1228, 1256
BsaWI	WCCGGW	1 cut(s)	170
BsaXI	ACNNNNNCTCC	8 cut(s)	368, 398, 607, 637, 1271, 1301, 1320, 1350
Bsc4I	CCNNNNNNNGG	6 cut(s)	83, 350, 594, 618, 971, 1219
Bse118I	RCCGGY	2 cut(s)	412, 427
Bse1I	ACTGG	4 cut(s)	449, 1013, 1135, 1156
Bse3DI	GCAATG	4 cut(s)	297, 918, 1017, 1068
Bse8I	GATNNNNATC	1 cut(s)	311
BseBI	CCWGG	5 cut(s)	48, 511, 619, 855, 1257
BseDI	CCNNGG	5 cut(s)	349, 387, 592, 1228, 1256
BseGI	GGATG	2 cut(s)	1137, 1175
BseJI	GATNNNNATC	1 cut(s)	311
BseLI	CCNNNNNNNGG	6 cut(s)	83, 350, 594, 618, 971, 1219
BseMI	GCAATG	4 cut(s)	297, 918, 1017, 1068
BseMII	CTCAG	2 cut(s)	521, 1060
BseNI	ACTGG	4 cut(s)	449, 1013, 1135, 1156
BseRI	GAGGAG	7 cut(s)	108, 172, 175, 189, 323, 1279, 1328
BseSI	GKGCMC	1 cut(s)	444
BseX3I	CGGCCG	2 cut(s)	259, 352
BseXI	GCAGC	9 cut(s)	132, 327, 465, 468, 721, 905, 1087, 1103, 1198
BsgI	GTGCAG	1 cut(s)	912
Bsh1236I	CGCG	2 cut(s)	351, 423
Bsh1285I	CGRYCG	2 cut(s)	262, 355
BshFI	GGCC	7 cut(s)	261, 354, 412, 509, 669, 935, 1262
BshNI	GGYRCC	1 cut(s)	251
BsiEI	CGRYCG	2 cut(s)	262, 355
BsiHKAI	GWGCWC	1 cut(s)	444
BsiHKCI	CYCGRG	2 cut(s)	591, 1080
BsiSI	CCGG	5 cut(s)	131, 171, 249, 413, 428
BslFI	GGGAC	4 cut(s)	37, 208, 1097, 1196
BslI	CCNNNNNNNGG	6 cut(s)	83, 350, 594, 618, 971, 1219
BsmAI	GTCTC	2 cut(s)	184, 237
BsmBI	CGTCTC	1 cut(s)	237
BsmFI	GGGAC	4 cut(s)	37, 208, 1097, 1196
BsmI	GAATGC	2 cut(s)	113, 721
BsnI	GGCC	7 cut(s)	261, 354, 412, 509, 669, 935, 1262
BsoBI	CYCGRG	2 cut(s)	591, 1080
Bsp119I	TTCGAA	1 cut(s)	1168
Bsp1286I	GDGCHC	1 cut(s)	444
Bsp1407I	TGTACA	1 cut(s)	1125
Bsp143I	GATC	4 cut(s)	312, 493, 550, 1252
Bsp19I	CCATGG	1 cut(s)	1228
BspANI	GGCC	7 cut(s)	261, 354, 412, 509, 669, 935, 1262
BspCNI	CTCAG	2 cut(s)	522, 1059
BspFNI	CGCG	2 cut(s)	351, 423
BspHI	TCATGA	1 cut(s)	496
BspLI	GGNNCC	6 cut(s)	253, 411, 1085, 1086, 1135, 1261
BspMAI	CTGCAG	2 cut(s)	970, 1093
BspMI	ACCTGC	1 cut(s)	973
BspPI	GGATC	1 cut(s)	1247
BspQI	GCTCTTC	1 cut(s)	443
BspT104I	TTCGAA	1 cut(s)	1168
BspT107I	GGYRCC	1 cut(s)	251
BsrBI	CCGCTC	1 cut(s)	104
BsrDI	GCAATG	4 cut(s)	297, 918, 1017, 1068
BsrFI	RCCGGY	2 cut(s)	412, 427
BsrGI	TGTACA	1 cut(s)	1125
BsrI	ACTGG	4 cut(s)	449, 1013, 1135, 1156
BssAI	RCCGGY	2 cut(s)	412, 427
BssECI	CCNNGG	5 cut(s)	349, 387, 592, 1228, 1256
BssMI	GATC	4 cut(s)	312, 493, 550, 1252
BssNI	GRCGYC	2 cut(s)	221, 252
BssT1I	CCWWGG	1 cut(s)	1228
Bst2UI	CCWGG	5 cut(s)	48, 511, 619, 855, 1257
Bst4CI	ACNGT	4 cut(s)	683, 695, 1246, 1275
Bst6I	CTCTTC	1 cut(s)	443
BstACI	GRCGYC	2 cut(s)	221, 252
BstAUI	TGTACA	1 cut(s)	1125
BstBAI	YACGTR	1 cut(s)	196
BstBI	TTCGAA	1 cut(s)	1168
BstC8I	GCNNGC	8 cut(s)	150, 256, 359, 425, 429, 479, 937, 1098
BstDEI	CTNAG	4 cut(s)	60, 530, 1046, 1196
BstDSI	CCRYGG	2 cut(s)	349, 1228
BstENI	CCTNNNNNAGG	1 cut(s)	81
BstF5I	GGATG	2 cut(s)	1137, 1175
BstFNI	CGCG	2 cut(s)	351, 423
BstH2I	RGCGCY	3 cut(s)	255, 273, 1097
BstHHI	GCGC	4 cut(s)	254, 272, 423, 1096
BstKTI	GATC	4 cut(s)	315, 496, 553, 1255
BstMAI	GTCTC	2 cut(s)	184, 237
BstMBI	GATC	4 cut(s)	312, 493, 550, 1252
BstMCI	CGRYCG	2 cut(s)	262, 355
BstNI	CCWGG	5 cut(s)	48, 511, 619, 855, 1257
BstSCI	CCNGG	5 cut(s)	46, 509, 617, 853, 1255
BstSFI	CTRYAG	2 cut(s)	966, 1089
BstSLI	GKGCMC	1 cut(s)	444
BstUI	CGCG	2 cut(s)	351, 423
BstV1I	GCAGC	9 cut(s)	132, 327, 465, 468, 721, 905, 1087, 1103, 1198
BstZI	CGGCCG	2 cut(s)	259, 352
BsuRI	GGCC	7 cut(s)	261, 354, 412, 509, 669, 935, 1262
BtgI	CCRYGG	2 cut(s)	349, 1228
BtgZI	GCGATG	1 cut(s)	126
BtrI	CACGTC	1 cut(s)	502
BtsCI	GGATG	2 cut(s)	1137, 1175
BtsIMutI	CAGTG	6 cut(s)	442, 688, 700, 1054, 1128, 1242
BveI	ACCTGC	1 cut(s)	973
Cac8I	GCNNGC	8 cut(s)	150, 256, 359, 425, 429, 479, 937, 1098
CaiI	CAGNNNCTG	1 cut(s)	1273
CciI	TCATGA	1 cut(s)	496
CciNI	GCGGCCGC	2 cut(s)	259, 352
CfoI	GCGC	4 cut(s)	254, 272, 423, 1096
Cfr10I	RCCGGY	2 cut(s)	412, 427
Cfr13I	GGNCC	3 cut(s)	410, 1084, 1260
Cfr42I	CCGCGG	1 cut(s)	352
CseI	GACGC	1 cut(s)	210
Csp6I	GTAC	2 cut(s)	1126, 1276
CviAII	CATG	6 cut(s)	497, 758, 779, 1229, 1331, 1401
CviQI	GTAC	2 cut(s)	1126, 1276
DdeI	CTNAG	4 cut(s)	60, 530, 1046, 1196
DinI	GGCGCC	1 cut(s)	253
DpnI	GATC	4 cut(s)	314, 495, 552, 1254
DpnII	GATC	4 cut(s)	312, 493, 550, 1252
EaeI	YGGCCR	3 cut(s)	259, 352, 507
EagI	CGGCCG	2 cut(s)	259, 352
Eam1104I	CTCTTC	1 cut(s)	443
EarI	CTCTTC	1 cut(s)	443
EclXI	CGGCCG	2 cut(s)	259, 352
Eco130I	CCWWGG	1 cut(s)	1228
Eco147I	AGGCCT	1 cut(s)	935
Eco32I	GATATC	1 cut(s)	1040
Eco47I	GGWCC	1 cut(s)	1084
Eco47III	AGCGCT	1 cut(s)	1095
Eco52I	CGGCCG	2 cut(s)	259, 352
Eco72I	CACGTG	1 cut(s)	196
Eco88I	CYCGRG	2 cut(s)	591, 1080
EcoNI	CCTNNNNNAGG	1 cut(s)	81
EcoO109I	RGGNCCY	1 cut(s)	1084
EcoRI	GAATTC	2 cut(s)	107, 556
EcoRII	CCWGG	5 cut(s)	46, 509, 617, 853, 1255
EcoRV	GATATC	1 cut(s)	1040
EcoT14I	CCWWGG	1 cut(s)	1228
EgeI	GGCGCC	1 cut(s)	253
EheI	GGCGCC	1 cut(s)	253
ErhI	CCWWGG	1 cut(s)	1228
Esp3I	CGTCTC	1 cut(s)	237
FaeI	CATG	6 cut(s)	500, 761, 782, 1232, 1334, 1404
FaqI	GGGAC	4 cut(s)	37, 208, 1097, 1196
FatI	CATG	6 cut(s)	496, 757, 778, 1228, 1330, 1400
FauI	CCCGC	2 cut(s)	64, 234
FbaI	TGATCA	2 cut(s)	312, 550
FokI	GGATG	2 cut(s)	1124, 1162
FspBI	CTAG	2 cut(s)	153, 1121
GlaI	GCGC	4 cut(s)	253, 271, 422, 1095
GsuI	CTGGAG	3 cut(s)	457, 996, 1152
HaeII	RGCGCY	3 cut(s)	255, 273, 1097
HaeIII	GGCC	7 cut(s)	261, 354, 412, 509, 669, 935, 1262
HapII	CCGG	5 cut(s)	131, 171, 249, 413, 428
HgaI	GACGC	1 cut(s)	210
HhaI	GCGC	4 cut(s)	254, 272, 423, 1096
Hin1I	GRCGYC	2 cut(s)	221, 252
Hin1II	CATG	6 cut(s)	500, 761, 782, 1232, 1334, 1404
Hin6I	GCGC	4 cut(s)	252, 270, 421, 1094
HinP1I	GCGC	4 cut(s)	252, 270, 421, 1094
HincII	GTYRAC	1 cut(s)	637
HindII	GTYRAC	1 cut(s)	637
HinfI	GANTC	8 cut(s)	51, 127, 298, 534, 622, 1170, 1192, 1390
HpaI	GTTAAC	1 cut(s)	637
HpaII	CCGG	5 cut(s)	131, 171, 249, 413, 428
HphI	GGTGA	2 cut(s)	601, 954
Hpy166II	GTNNAC	5 cut(s)	442, 637, 736, 1126, 1128
Hpy188I	TCNGA	8 cut(s)	92, 185, 287, 303, 376, 388, 555, 1114
Hpy188III	TCNNGA	3 cut(s)	497, 797, 1082
Hpy8I	GTNNAC	5 cut(s)	442, 637, 736, 1126, 1128
Hpy99I	CGWCG	3 cut(s)	220, 376, 1283
HpyAV	CCTTC	3 cut(s)	331, 801, 993
HpyCH4III	ACNGT	4 cut(s)	683, 695, 1246, 1275
HpyCH4IV	ACGT	2 cut(s)	195, 501
HpyF3I	CTNAG	4 cut(s)	60, 530, 1046, 1196
HpySE526I	ACGT	2 cut(s)	195, 501
Hsp92I	GRCGYC	2 cut(s)	221, 252
Hsp92II	CATG	6 cut(s)	500, 761, 782, 1232, 1334, 1404
HspAI	GCGC	4 cut(s)	252, 270, 421, 1094
KasI	GGCGCC	1 cut(s)	251
KflI	GGGWCCC	1 cut(s)	1084
KroI	GCCGGC	1 cut(s)	427
KroNI	GCCGGC	1 cut(s)	429
Ksp22I	TGATCA	2 cut(s)	312, 550
KspAI	GTTAAC	1 cut(s)	637
KspI	CCGCGG	1 cut(s)	352
Kzo9I	GATC	4 cut(s)	312, 493, 550, 1252
LguI	GCTCTTC	1 cut(s)	443
LmnI	GCTCC	7 cut(s)	95, 101, 288, 336, 476, 1015, 1133
Lsp1109I	GCAGC	9 cut(s)	132, 327, 465, 468, 721, 905, 1087, 1103, 1198
LweI	GCATC	4 cut(s)	143, 149, 297, 1020
MaeI	CTAG	2 cut(s)	153, 1121
MaeII	ACGT	2 cut(s)	195, 501
MaeIII	GTNAC	1 cut(s)	1246
MalI	GATC	4 cut(s)	314, 495, 552, 1254
MbiI	CCGCTC	1 cut(s)	104
MboI	GATC	4 cut(s)	312, 493, 550, 1252
MboII	GAAGA	3 cut(s)	316, 460, 1157
MhlI	GDGCHC	1 cut(s)	444
MluCI	AATT	6 cut(s)	80, 107, 380, 556, 569, 1161
Mly113I	GGCGCC	1 cut(s)	252
MlyI	GAGTC	4 cut(s)	121, 307, 543, 616
MmeI	TCCRAC	1 cut(s)	354
MroNI	GCCGGC	1 cut(s)	427
MroXI	GAANNNNTTC	1 cut(s)	1164
MseI	TTAA	1 cut(s)	636
MslI	CAYNNNNRTG	3 cut(s)	659, 783, 1142
MspA1I	CMGCKG	4 cut(s)	258, 351, 712, 1238
MspI	CCGG	5 cut(s)	131, 171, 249, 413, 428
MspR9I	CCNGG	5 cut(s)	48, 511, 619, 855, 1257
Mva1269I	GAATGC	2 cut(s)	113, 721
MvaI	CCWGG	5 cut(s)	48, 511, 619, 855, 1257
MvnI	CGCG	2 cut(s)	351, 423
NaeI	GCCGGC	1 cut(s)	429
NarI	GGCGCC	1 cut(s)	252
NcoI	CCATGG	1 cut(s)	1228
NdeII	GATC	4 cut(s)	312, 493, 550, 1252
NgoMIV	GCCGGC	1 cut(s)	427
NlaIII	CATG	6 cut(s)	500, 761, 782, 1232, 1334, 1404
NlaIV	GGNNCC	6 cut(s)	253, 411, 1085, 1086, 1135, 1261
NmeAIII	GCCGAG	1 cut(s)	1059
NotI	GCGGCCGC	2 cut(s)	259, 352
NspV	TTCGAA	1 cut(s)	1168
PagI	TCATGA	1 cut(s)	496
PaqCI	CACCTGC	1 cut(s)	973
PceI	AGGCCT	1 cut(s)	935
PciSI	GCTCTTC	1 cut(s)	443
PcsI	WCGNNNNNNNCGW	1 cut(s)	498
PctI	GAATGC	2 cut(s)	113, 721
PdiI	GCCGGC	1 cut(s)	429
PdmI	GAANNNNTTC	1 cut(s)	1164
PfeI	GAWTC	4 cut(s)	51, 1170, 1192, 1390
PflFI	GACNNNGTC	1 cut(s)	220
PleI	GAGTC	4 cut(s)	121, 306, 542, 616
PluTI	GGCGCC	1 cut(s)	255
PmaCI	CACGTG	1 cut(s)	196
PmlI	CACGTG	1 cut(s)	196
PpsI	GAGTC	4 cut(s)	121, 306, 542, 616
Ppu21I	YACGTR	1 cut(s)	196
PpuMI	RGGWCCY	1 cut(s)	1084
Psp5II	RGGWCCY	1 cut(s)	1084
Psp6I	CCWGG	5 cut(s)	46, 509, 617, 853, 1255
PspCI	CACGTG	1 cut(s)	196
PspGI	CCWGG	5 cut(s)	46, 509, 617, 853, 1255
PspN4I	GGNNCC	6 cut(s)	253, 411, 1085, 1086, 1135, 1261
PspPI	GGNCC	3 cut(s)	410, 1084, 1260
PspPPI	RGGWCCY	1 cut(s)	1084
PstI	CTGCAG	2 cut(s)	970, 1093
PstNI	CAGNNNCTG	1 cut(s)	1273
PsyI	GACNNNGTC	1 cut(s)	220
PvuII	CAGCTG	2 cut(s)	712, 1238
RsaI	GTAC	2 cut(s)	1127, 1277
RsaNI	GTAC	2 cut(s)	1126, 1276
RseI	CAYNNNNRTG	3 cut(s)	659, 783, 1142
SacII	CCGCGG	1 cut(s)	352
SapI	GCTCTTC	1 cut(s)	443
SaqAI	TTAA	1 cut(s)	636
Sau3AI	GATC	4 cut(s)	312, 493, 550, 1252
Sau96I	GGNCC	3 cut(s)	410, 1084, 1260
SchI	GAGTC	4 cut(s)	121, 307, 543, 616
ScrFI	CCNGG	5 cut(s)	48, 511, 619, 855, 1257
SduI	GDGCHC	1 cut(s)	444
SfaNI	GCATC	4 cut(s)	143, 149, 297, 1020
SfcI	CTRYAG	2 cut(s)	966, 1089
SfoI	GGCGCC	1 cut(s)	253
Sfr303I	CCGCGG	1 cut(s)	352
SfuI	TTCGAA	1 cut(s)	1168
SgrBI	CCGCGG	1 cut(s)	352
SinI	GGWCC	1 cut(s)	1084
SmiMI	CAYNNNNRTG	3 cut(s)	659, 783, 1142
SmlI	CTYRAG	1 cut(s)	905
SmoI	CTYRAG	1 cut(s)	905
Sse9I	AATT	6 cut(s)	80, 107, 380, 556, 569, 1161
SseBI	AGGCCT	1 cut(s)	935
SspDI	GGCGCC	1 cut(s)	251
SspI	AATATT	1 cut(s)	996
SspMI	CTAG	2 cut(s)	153, 1121
StuI	AGGCCT	1 cut(s)	935
StyD4I	CCNGG	5 cut(s)	46, 509, 617, 853, 1255
StyI	CCWWGG	1 cut(s)	1228
TaaI	ACNGT	4 cut(s)	683, 695, 1246, 1275
TaiI	ACGT	2 cut(s)	198, 504
TaqI	TCGA	4 cut(s)	125, 492, 575, 1168
TaqII	GACCGA	1 cut(s)	550
TasI	AATT	6 cut(s)	80, 107, 380, 556, 569, 1161
TatI	WGTACW	1 cut(s)	1125
TauI	GCSGC	7 cut(s)	261, 264, 354, 357, 484, 509, 1055
TfiI	GAWTC	4 cut(s)	51, 1170, 1192, 1390
Tru1I	TTAA	1 cut(s)	636
Tru9I	TTAA	1 cut(s)	636
TscAI	CASTG	6 cut(s)	449, 688, 700, 1054, 1135, 1249
TseI	GCWGC	9 cut(s)	145, 340, 453, 456, 709, 893, 1091, 1100, 1186
TspDTI	ATGAA	6 cut(s)	111, 690, 767, 833, 1173, 1220
TspGWI	ACGGA	3 cut(s)	41, 753, 1130
TspRI	CASTG	6 cut(s)	449, 688, 700, 1054, 1135, 1249
Tth111I	GACNNNGTC	1 cut(s)	220
VneI	GTGCAC	1 cut(s)	440
VpaK11BI	GGWCC	1 cut(s)	1084
XagI	CCTNNNNNAGG	1 cut(s)	81
XapI	RAATTY	3 cut(s)	107, 556, 1161
XcmI	CCANNNNNNNNNTGG	1 cut(s)	517
XmnI	GAANNNNTTC	1 cut(s)	1164
XspI	CTAG	2 cut(s)	153, 1121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.