AT1G18480

Calcineurin-like phosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014204
Physical Location & Seq
Forward (+)
6361586 .. 6363061
1476 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G18480.1

Sequence Viewer

Length: 1176 bp
ATGTCAAGCAGAGAAAACCCTAGCGGAATCTGCAAAAGCATTCCCAAGCTCATCTCTTCCTTCGTCGACACTTTCGTTGATTACTCCGTCTCCGGCATCTTCCTGCCCCAAGATCCTAGCTCACAAAATGAGATTCTGCAAACGAGGTTCGAGAAGCCGGAGCGACTCGTTGCAATCGGTGATCTCCATGGCGATCTCGAGAAGTCTAGAGAAGCATTCAAGATCGCTGGTCTGATTGATTCGTCGGACAGATGGACTGGTGGATCAACGATGGTTGTTCAGGTGGGCGACGTACTAGATCGAGGTGGAGAGGAGTTGAAGATACTTTATTTCTTAGAGAAATTGAAACGAGAGGCTGAGAGAGCTGGAGGTAAGATTCTGACTATGAATGGGAACCATGAGATCATGAATATAGAAGGTGACTTTAGATATGTGACTAAGAAAGGTTTAGAGGAATTTCAGATTTGGGCTGATTGGTATTGTTTAGGGAACAAGATGAAGACTTTATGCAGTGGTCTTGATAAACCTAAGGATCCTTACGAAGGGATTCCGATGAGCTTCCCTCGTATGAGAGCCGACTGTTTTGAAGGAATTAGAGCTAGGATTGCTGCATTGAGACCTGATGGTCCGATTGCAAAGAGATTCTTGACTAAGAATCAAACAGTTGCTGTTGTTGGTGATTCGGTTTTTGTTCACGGTGGTCTTTTAGCTGAGCATATAGAGTATGGACTGGAGAGGATTAACGAGGAGGTTCGGGGTTGGATTAACGGGTTTAAAGGAGGAAGATATGCGCCTGCTTATTGTAGAGGAGGGAACTCTGTAGTTTGGTTGAGGAAGTTCTCGGAAGAAATGGCTCACAAATGTGATTGTGCAGCTCTTGAGCATGCTCTTTCCACTATTCCCGGGGTTAAGAGGATGATCATGGGACATACAATCCAGGATGCTGGTATCAACGGTGTTTGTAATGATAAAGCCATTAGGATTGATGTTGGCATGTCCAAGGGATGTGCTGATGGATTGCCTGAGGTTTTGGAGATCCGCAGGGACTCCGGTGTACGGATAGTGACATCGAATCCATTGTATAAGGAGAATCTGTATTCTCATGTAGCTCCTGATAGTAAAACGGGTCTCGGGTTACTGGTACCAGTTCCTAAGCAAGTTGAAGTCAAAGCTTGA

Protein Analysis

391

Amino Acids

43.28

Weight (kDa)

7.07

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 55 - 164 2.3e-08 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014204)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G18480
fragaria_vesca FvH4_3g25460 FvH4_3g25460 FvH4_3g25460
malus_domestica MD02G1292100.v1.1 MD07G1034500.v1.1
prunus_persica Prupe.2G031200_v2.0.a1
pyrus_communis pycom02g24670
rosa_chinensis RchiOBHm_Chr4g0435781
rosa_laevigata RLG00000006559
rosa_multiflora Rmu_sc0000051.1_g000023 Rmu_sc0004389.1_g000004
rosa_roxburghii Rroxscaffold_5G00376970
rosa_rugosa Rorug04G0289600
rosa_samantha Rh4BG352600 Rh4CG367100
rosa_wichuraiana Rw4G030030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 624
Acc65I GGTACC 1 cut(s) 1141
AccB1I GGYRCC 1 cut(s) 1141
AccI GTMKAC 1 cut(s) 66
AciI CCGC 2 cut(s) 24, 1039
AclWI GGATC 5 cut(s) 107, 271, 527, 540, 1030
AcsI RAATTY 1 cut(s) 455
AfaI GTAC 3 cut(s) 294, 1056, 1143
AfiI CCNNNNNNNGG 2 cut(s) 542, 1056
AgsI TTSAA 5 cut(s) 220, 319, 346, 587, 1163
AjnI CCWGG 1 cut(s) 936
AleI CACNNNNGTG 1 cut(s) 861
AluBI AGCT 9 cut(s) 49, 120, 365, 558, 599, 710, 875, 1109, 1172
AluI AGCT 9 cut(s) 49, 120, 365, 558, 599, 710, 875, 1109, 1172
Alw26I GTCTC 3 cut(s) 94, 610, 1133
AlwI GGATC 5 cut(s) 107, 271, 527, 540, 1030
AlwNI CAGNNNCTG 1 cut(s) 668
Ama87I CYCGRG 3 cut(s) 197, 902, 1130
ApeKI GCWGC 2 cut(s) 608, 872
ApoI RAATTY 1 cut(s) 455
Asp700I GAANNNNTTC 1 cut(s) 546
Asp718I GGTACC 1 cut(s) 1141
AspLEI GCGC 1 cut(s) 793
AspS9I GGNCC 1 cut(s) 626
AsuC2I CCSGG 2 cut(s) 903, 904
AsuHPI GGTGA 3 cut(s) 191, 431, 689
AvaI CYCGRG 3 cut(s) 197, 902, 1130
AvaII GGWCC 1 cut(s) 626
AxyI CCTNAGG 2 cut(s) 528, 1023
BamHI GGATCC 1 cut(s) 532
BanI GGYRCC 1 cut(s) 1141
BbsI GAAGAC 1 cut(s) 506
BbvI GCAGC 2 cut(s) 595, 884
BccI CCATC 4 cut(s) 246, 265, 617, 1007
BciT130I CCWGG 1 cut(s) 938
BclI TGATCA 1 cut(s) 918
BcnI CCSGG 2 cut(s) 903, 904
BcoDI GTCTC 3 cut(s) 94, 610, 1133
BfaI CTAG 5 cut(s) 21, 117, 207, 296, 600
BfmI CTRYAG 1 cut(s) 819
BisI GCNGC 2 cut(s) 609, 873
BlpI GCTNAGC 1 cut(s) 711
BlsI GCNGC 2 cut(s) 610, 874
Bme1390I CCNGG 3 cut(s) 903, 904, 938
Bme18I GGWCC 1 cut(s) 626
BmeT110I CYCGRG 3 cut(s) 197, 902, 1130
BmgT120I GGNCC 1 cut(s) 626
BmiI GGNNCC 3 cut(s) 395, 534, 1143
BmrFI CCNGG 3 cut(s) 903, 904, 938
BmsI GCATC 2 cut(s) 105, 931
BpiI GAAGAC 1 cut(s) 506
BplI GAGNNNNNCTC 2 cut(s) 547, 579
BpmI CTGGAG 2 cut(s) 387, 752
Bpu10I CCTNAGC 1 cut(s) 1152
Bpu1102I GCTNAGC 1 cut(s) 711
BpuEI CTTGAG 1 cut(s) 899
BpuMI CCSGG 2 cut(s) 903, 904
BsaI GGTCTC 2 cut(s) 610, 1133
BsaJI CCNNGG 4 cut(s) 187, 902, 903, 999
BsaWI WCCGGW 1 cut(s) 1049
BsaXI ACNNNNNCTCC 4 cut(s) 74, 104, 1079, 1109
Bsc4I CCNNNNNNNGG 2 cut(s) 542, 1056
Bse1I ACTGG 4 cut(s) 262, 735, 1143, 1145
Bse21I CCTNAGG 2 cut(s) 528, 1023
BseBI CCWGG 1 cut(s) 938
BseDI CCNNGG 4 cut(s) 187, 902, 903, 999
BseGI GGATG 3 cut(s) 921, 946, 1010
BseLI CCNNNNNNNGG 2 cut(s) 542, 1056
BseMII CTCAG 3 cut(s) 348, 702, 1014
BseNI ACTGG 4 cut(s) 262, 735, 1143, 1145
BseRI GAGGAG 3 cut(s) 326, 761, 822
BseXI GCAGC 2 cut(s) 595, 884
BsgI GTGCAG 1 cut(s) 891
BshNI GGYRCC 1 cut(s) 1141
BsiHKCI CYCGRG 3 cut(s) 197, 902, 1130
BsiSI CCGG 4 cut(s) 93, 158, 903, 1050
BslFI GGGAC 2 cut(s) 939, 1058
BslI CCNNNNNNNGG 2 cut(s) 542, 1056
BsmAI GTCTC 3 cut(s) 94, 610, 1133
BsmBI CGTCTC 1 cut(s) 94
BsmFI GGGAC 2 cut(s) 939, 1058
BsmI GAATGC 2 cut(s) 39, 215
Bso31I GGTCTC 2 cut(s) 610, 1133
BsoBI CYCGRG 3 cut(s) 197, 902, 1130
Bsp1720I GCTNAGC 1 cut(s) 711
Bsp19I CCATGG 1 cut(s) 187
BspACI CCGC 2 cut(s) 24, 1039
BspCNI CTCAG 3 cut(s) 349, 703, 1015
BspHI TCATGA 1 cut(s) 405
BspLI GGNNCC 3 cut(s) 395, 534, 1143
BspPI GGATC 5 cut(s) 107, 271, 527, 540, 1030
BspT107I GGYRCC 1 cut(s) 1141
BspTNI GGTCTC 2 cut(s) 610, 1133
BsrI ACTGG 4 cut(s) 262, 735, 1143, 1145
BssECI CCNNGG 4 cut(s) 187, 902, 903, 999
BssT1I CCWWGG 2 cut(s) 187, 999
Bst2UI CCWGG 1 cut(s) 938
Bst4CI ACNGT 4 cut(s) 581, 664, 698, 956
Bst6I CTCTTC 1 cut(s) 61
BstC8I GCNNGC 2 cut(s) 795, 885
BstDEI CTNAG 8 cut(s) 334, 357, 438, 528, 651, 711, 1023, 1152
BstDSI CCRYGG 1 cut(s) 187
BstENI CCTNNNNNAGG 1 cut(s) 540
BstF5I GGATG 3 cut(s) 921, 946, 1010
BstHHI GCGC 1 cut(s) 793
BstMAI GTCTC 3 cut(s) 94, 610, 1133
BstMWI GCNNNNNNNGC 3 cut(s) 30, 362, 605
BstNI CCWGG 1 cut(s) 938
BstNSI RCATGY 2 cut(s) 887, 997
BstSCI CCNGG 3 cut(s) 901, 902, 936
BstSFI CTRYAG 1 cut(s) 819
BstV1I GCAGC 2 cut(s) 595, 884
BstV2I GAAGAC 1 cut(s) 506
BstX2I RGATCY 3 cut(s) 112, 532, 1035
BstXI CCANNNNNNTGG 1 cut(s) 944
BstYI RGATCY 3 cut(s) 112, 532, 1035
Bsu36I CCTNAGG 2 cut(s) 528, 1023
BtgI CCRYGG 1 cut(s) 187
BtsCI GGATG 3 cut(s) 921, 946, 1010
BtsI GCAGTG 1 cut(s) 517
BtsIMutI CAGTG 1 cut(s) 517
Cac8I GCNNGC 2 cut(s) 795, 885
CaiI CAGNNNCTG 1 cut(s) 668
CciI TCATGA 1 cut(s) 405
CfoI GCGC 1 cut(s) 793
Cfr13I GGNCC 1 cut(s) 626
Cfr9I CCCGGG 1 cut(s) 902
Csp6I GTAC 3 cut(s) 293, 1055, 1142
CviAII CATG 7 cut(s) 188, 398, 406, 884, 922, 994, 1103
CviQI GTAC 3 cut(s) 293, 1055, 1142
DdeI CTNAG 8 cut(s) 334, 357, 438, 528, 651, 711, 1023, 1152
DraI TTTAAA 1 cut(s) 775
DrdI GACNNNNNNGTC 1 cut(s) 624
DseDI GACNNNNNNGTC 1 cut(s) 624
Eam1104I CTCTTC 1 cut(s) 61
EarI CTCTTC 1 cut(s) 61
Eco130I CCWWGG 2 cut(s) 187, 999
Eco31I GGTCTC 2 cut(s) 610, 1133
Eco47I GGWCC 1 cut(s) 626
Eco81I CCTNAGG 2 cut(s) 528, 1023
Eco88I CYCGRG 3 cut(s) 197, 902, 1130
EcoNI CCTNNNNNAGG 1 cut(s) 540
EcoRII CCWGG 1 cut(s) 936
EcoT14I CCWWGG 2 cut(s) 187, 999
ErhI CCWWGG 2 cut(s) 187, 999
Esp3I CGTCTC 1 cut(s) 94
FaeI CATG 7 cut(s) 191, 401, 409, 887, 925, 997, 1106
FalI AAGNNNNNCTT 2 cut(s) 629, 661
FaqI GGGAC 2 cut(s) 939, 1058
FatI CATG 7 cut(s) 187, 397, 405, 883, 921, 993, 1102
FbaI TGATCA 1 cut(s) 918
FblI GTMKAC 1 cut(s) 66
Fnu4HI GCNGC 2 cut(s) 609, 873
FokI GGATG 3 cut(s) 928, 953, 1017
Fsp4HI GCNGC 2 cut(s) 609, 873
FspBI CTAG 5 cut(s) 21, 117, 207, 296, 600
GlaI GCGC 1 cut(s) 792
GluI GCNGC 2 cut(s) 609, 873
GsuI CTGGAG 2 cut(s) 387, 752
HapII CCGG 4 cut(s) 93, 158, 903, 1050
HhaI GCGC 1 cut(s) 793
Hin1II CATG 7 cut(s) 191, 401, 409, 887, 925, 997, 1106
Hin6I GCGC 1 cut(s) 791
HinP1I GCGC 1 cut(s) 791
HincII GTYRAC 1 cut(s) 67
HindII GTYRAC 1 cut(s) 67
HindIII AAGCTT 1 cut(s) 1170
HpaII CCGG 4 cut(s) 93, 158, 903, 1050
HphI GGTGA 3 cut(s) 191, 431, 689
Hpy166II GTNNAC 3 cut(s) 67, 694, 1055
Hpy188I TCNGA 7 cut(s) 234, 247, 381, 462, 552, 630, 844
Hpy8I GTNNAC 3 cut(s) 67, 694, 1055
Hpy99I CGWCG 3 cut(s) 68, 247, 293
HpyAV CCTTC 4 cut(s) 70, 410, 536, 581
HpyCH4III ACNGT 4 cut(s) 581, 664, 698, 956
HpyCH4IV ACGT 1 cut(s) 291
HpyCH4V TGCA 7 cut(s) 33, 139, 173, 510, 611, 635, 872
HpyF10VI GCNNNNNNNGC 3 cut(s) 30, 362, 605
HpyF3I CTNAG 8 cut(s) 334, 357, 438, 528, 651, 711, 1023, 1152
HpySE526I ACGT 1 cut(s) 291
Hsp92II CATG 7 cut(s) 191, 401, 409, 887, 925, 997, 1106
HspAI GCGC 1 cut(s) 791
KpnI GGTACC 1 cut(s) 1145
Ksp22I TGATCA 1 cut(s) 918
LmnI GCTCC 2 cut(s) 160, 1114
Lsp1109I GCAGC 2 cut(s) 595, 884
LweI GCATC 2 cut(s) 105, 931
MaeI CTAG 5 cut(s) 21, 117, 207, 296, 600
MaeII ACGT 1 cut(s) 291
MaeIII GTNAC 4 cut(s) 419, 433, 1063, 1134
MboII GAAGA 6 cut(s) 48, 91, 331, 511, 795, 857
MflI RGATCY 3 cut(s) 112, 532, 1035
MluCI AATT 3 cut(s) 341, 455, 591
MlyI GAGTC 2 cut(s) 159, 1040
MmeI TCCRAC 2 cut(s) 225, 740
MroXI GAANNNNTTC 1 cut(s) 546
MseI TTAA 4 cut(s) 741, 765, 774, 909
MslI CAYNNNNRTG 1 cut(s) 861
MspI CCGG 4 cut(s) 93, 158, 903, 1050
MspR9I CCNGG 3 cut(s) 903, 904, 938
Mva1269I GAATGC 2 cut(s) 39, 215
MvaI CCWGG 1 cut(s) 938
MwoI GCNNNNNNNGC 3 cut(s) 30, 362, 605
NciI CCSGG 2 cut(s) 903, 904
NcoI CCATGG 1 cut(s) 187
NlaIII CATG 7 cut(s) 191, 401, 409, 887, 925, 997, 1106
NlaIV GGNNCC 3 cut(s) 395, 534, 1143
NmuCI GTSAC 3 cut(s) 419, 433, 1063
NspI RCATGY 2 cut(s) 887, 997
OliI CACNNNNGTG 1 cut(s) 861
PaeI GCATGC 1 cut(s) 887
PaeR7I CTCGAG 1 cut(s) 197
PagI TCATGA 1 cut(s) 405
PcsI WCGNNNNNNNCGW 1 cut(s) 72
PctI GAATGC 2 cut(s) 39, 215
PdmI GAANNNNTTC 1 cut(s) 546
PfoI TCCNGGA 1 cut(s) 936
PkrI GCNGC 2 cut(s) 610, 874
PleI GAGTC 2 cut(s) 159, 1040
PpsI GAGTC 2 cut(s) 159, 1040
Psp6I CCWGG 1 cut(s) 936
PspGI CCWGG 1 cut(s) 936
PspN4I GGNNCC 3 cut(s) 395, 534, 1143
PspPI GGNCC 1 cut(s) 626
PstNI CAGNNNCTG 1 cut(s) 668
PsuI RGATCY 3 cut(s) 112, 532, 1035
RsaI GTAC 3 cut(s) 294, 1056, 1143
RsaNI GTAC 3 cut(s) 293, 1055, 1142
RseI CAYNNNNRTG 1 cut(s) 861
SalI GTCGAC 1 cut(s) 65
SaqAI TTAA 4 cut(s) 741, 765, 774, 909
SatI GCNGC 2 cut(s) 609, 873
Sau96I GGNCC 1 cut(s) 626
SchI GAGTC 2 cut(s) 159, 1040
ScrFI CCNGG 3 cut(s) 903, 904, 938
SfaNI GCATC 2 cut(s) 105, 931
SfcI CTRYAG 1 cut(s) 819
Sfr274I CTCGAG 1 cut(s) 197
SinI GGWCC 1 cut(s) 626
SlaI CTCGAG 1 cut(s) 197
SmaI CCCGGG 1 cut(s) 904
SmiMI CAYNNNNRTG 1 cut(s) 861
SmlI CTYRAG 2 cut(s) 197, 878
SmoI CTYRAG 2 cut(s) 197, 878
SphI GCATGC 1 cut(s) 887
Sse9I AATT 3 cut(s) 341, 455, 591
SsiI CCGC 2 cut(s) 24, 1039
SspMI CTAG 5 cut(s) 21, 117, 207, 296, 600
StyD4I CCNGG 3 cut(s) 901, 902, 936
StyI CCWWGG 2 cut(s) 187, 999
TaaI ACNGT 4 cut(s) 581, 664, 698, 956
TaiI ACGT 1 cut(s) 294
TaqI TCGA 5 cut(s) 66, 150, 198, 301, 1070
TasI AATT 3 cut(s) 341, 455, 591
Tru1I TTAA 4 cut(s) 741, 765, 774, 909
Tru9I TTAA 4 cut(s) 741, 765, 774, 909
TscAI CASTG 1 cut(s) 517
TseFI GTSAC 3 cut(s) 419, 433, 1063
TseI GCWGC 2 cut(s) 608, 872
Tsp45I GTSAC 3 cut(s) 419, 433, 1063
TspDTI ATGAA 3 cut(s) 401, 422, 512
TspGWI ACGGA 2 cut(s) 76, 1072
TspMI CCCGGG 1 cut(s) 902
TspRI CASTG 1 cut(s) 517
VpaK11BI GGWCC 1 cut(s) 626
XagI CCTNNNNNAGG 1 cut(s) 540
XapI RAATTY 1 cut(s) 455
XbaI TCTAGA 1 cut(s) 206
XceI RCATGY 2 cut(s) 887, 997
XhoI CTCGAG 1 cut(s) 197
XmaI CCCGGG 1 cut(s) 902
XmiI GTMKAC 1 cut(s) 66
XmnI GAANNNNTTC 1 cut(s) 546
XspI CTAG 5 cut(s) 21, 117, 207, 296, 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.