MD02G1292100.v1.1

Calcineurin-like phosphoesterase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
34808338 .. 34812189
3852 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1292100.v1.1.491

Sequence Viewer

Length: 1275 bp
ATGAAAAAAGCCGCCGCACCAGCGGCAGCAGCCGCCGCGGAGGACTCTTCCTCCATGTCATGCAAAGACGTTCCCAATCTCCTCTCCTCTTTCGTCGACACGTTCGTCGACTTCTCCGTCAGCGGCGGCCTCTTCCTCTTACCCCAAATTCCCAATAATCCACTTCCCGCCTCCCCTCAAAATCACCAGAATGCCCTCCCTGCCCGCCACAGCTCCGACAATCCCCTGCCCTCTCGCCCACCGCTGCAAACCTATTACCCCCCGCAGGACCGTTTGGTTGCAATCGGCGATCTCCACGGCGACTTGGAGAAGACCAAGGAATCGCTGAGGCTTGCTAAATTAATCGACCCGGAGTCGGGTAAATGGGTCGGGGGGTCCACCACCGTGGTCCAGATCGGCGACGTGATGGACCGGGGCGGCGACGAGATTAAAATCCTCTATTATCTCGAGAAATTGAAACGAGAAGCCGCCAGGTGCGGCGGCACGGTGATTACGATGCACGGCAACCACGAGATCATGAATGTGGAAGGAGATTTCAGGTTTGTGACCCGCAAGGGTTTGGAGGAGTTTAGGGTTTGGGCTGATTGGTATTCCATTGGGAACCGAATGAAGTCGCTCTGTAAAGGCTTAGAAAAGCCGAAGGATCCCTTTGATGGGGTGCCCTTAGGGTTTAAGAATGTGAAGGAAGAGTATGCTGATGGGTTTAGGGCAAGAATTGCAGCATTGAGGCCATCCGGTCCAATTTCGTCGCGGTTCTTGTCGGATAACGTGGCTGTGTTGGTTGTGGGGGACTCTGTTTTCGTCCACGGCGGGCTTTTGAGCCAGCACGTATCGTATGGTTTGGAGAAGATCAATGAGGAGGTGAGGGATTGGATTCATGGGTTGAAGGGAAGAATCGCGCCCGAGTTTTGTCACGGTGCGAATGGTGTGGTTTGGCTAAGGAAGTTTTCGCTTGGATTGGAGGATAAGTGTGATTGTTCAGCACTTGAACATGTTTTAGCTACCATTCCCGGCGCAAAGAGGATGATTATGGGTCATACCATTCAAGAGTTTGGGATTAATGGCGTTTGCAACGAGAGAGCAATTCGGATTGATGTAGGGATGTCCAAGGGGTGTATTAATGGCTTGCCCGAAGTTTTGGAGATCAAAGGGAATTCGGGTATGAGGATCTTGACGTCGAATCCACTGTACAAGAACAAGAAAAAATCTACTGTGCATAATGAGAGGCCTGCATTTTTGCCGCAAGGACCAAAACAAGTGGAAGTGAAGGCTTAG

Protein Analysis

425

Amino Acids

46.45

Weight (kDa)

8.5

Isoelectric Point (pI)

38.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 91 - 347 1.2e-09 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014204)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G18480
fragaria_vesca FvH4_3g25460 FvH4_3g25460 FvH4_3g25460
malus_domestica MD02G1292100.v1.1 MD07G1034500.v1.1
prunus_persica Prupe.2G031200_v2.0.a1
pyrus_communis pycom02g24670
rosa_chinensis RchiOBHm_Chr4g0435781
rosa_laevigata RLG00000006559
rosa_multiflora Rmu_sc0000051.1_g000023 Rmu_sc0004389.1_g000004
rosa_roxburghii Rroxscaffold_5G00376970
rosa_rugosa Rorug04G0289600
rosa_samantha Rh4BG352600 Rh4CG367100
rosa_wichuraiana Rw4G030030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 104, 116
AatII GACGTC 1 cut(s) 1178
AccB1I GGYRCC 1 cut(s) 658
AccI GTMKAC 2 cut(s) 96, 108
AccII CGCG 3 cut(s) 38, 751, 899
AclWI GGATC 3 cut(s) 638, 651, 1175
AcsI RAATTY 2 cut(s) 147, 1153
AcyI GRCGYC 1 cut(s) 1175
AfaI GTAC 1 cut(s) 1190
AfiI CCNNNNNNNGG 5 cut(s) 265, 355, 356, 653, 654
AflIII ACRYGT 2 cut(s) 99, 991
AgsI TTSAA 4 cut(s) 457, 886, 989, 1046
AhdI GACNNNNNGTC 1 cut(s) 352
AjiI CACGTC 1 cut(s) 403
AjnI CCWGG 1 cut(s) 470
AleI CACNNNNGTG 1 cut(s) 383
AluBI AGCT 2 cut(s) 213, 1001
AluI AGCT 2 cut(s) 213, 1001
AlwI GGATC 3 cut(s) 638, 651, 1175
Ama87I CYCGRG 2 cut(s) 446, 902
AoxI GGCC 3 cut(s) 127, 728, 1226
ApeKI GCWGC 4 cut(s) 26, 29, 244, 719
ApoI RAATTY 2 cut(s) 147, 1153
ArsI GACNNNNNNTTYG 2 cut(s) 782, 814
AseI ATTAAT 3 cut(s) 341, 1059, 1119
AspLEI GCGC 2 cut(s) 901, 1016
AspS9I GGNCC 6 cut(s) 268, 375, 388, 409, 737, 1247
AsuC2I CCSGG 3 cut(s) 350, 413, 1011
AsuHPI GGTGA 3 cut(s) 176, 499, 874
AvaI CYCGRG 2 cut(s) 446, 902
AvaII GGWCC 6 cut(s) 268, 375, 388, 409, 737, 1247
AxyI CCTNAGG 1 cut(s) 664
BaeGI GKGCMC 1 cut(s) 663
BamHI GGATCC 1 cut(s) 643
BanI GGYRCC 1 cut(s) 658
BauI CACGAG 1 cut(s) 509
BbsI GAAGAC 1 cut(s) 317
BbvCI CCTCAGC 1 cut(s) 326
BbvI GCAGC 4 cut(s) 38, 41, 231, 731
BccI CCATC 4 cut(s) 400, 647, 692, 739
BceAI ACGGC 3 cut(s) 313, 517, 823
BciT130I CCWGG 1 cut(s) 472
BcnI CCSGG 3 cut(s) 350, 413, 1011
Bme1390I CCNGG 4 cut(s) 350, 413, 472, 1011
Bme18I GGWCC 6 cut(s) 268, 375, 388, 409, 737, 1247
BmeRI GACNNNNNGTC 1 cut(s) 352
BmeT110I CYCGRG 2 cut(s) 446, 902
BmgBI CACGTC 1 cut(s) 403
BmgT120I GGNCC 6 cut(s) 268, 375, 388, 409, 737, 1247
BmiI GGNNCC 4 cut(s) 376, 602, 645, 660
BmrFI CCNGG 4 cut(s) 350, 413, 472, 1011
BmsI GCATC 1 cut(s) 486
BpiI GAAGAC 1 cut(s) 317
Bpu10I CCTNAGC 2 cut(s) 326, 938
BpuMI CCSGG 3 cut(s) 350, 413, 1011
BsaAI YACGTR 1 cut(s) 829
BsaBI GATNNNNATC 1 cut(s) 431
BsaHI GRCGYC 1 cut(s) 1175
BsaJI CCNNGG 7 cut(s) 36, 295, 315, 384, 412, 805, 1107
BsaWI WCCGGW 1 cut(s) 734
BsaXI ACNNNNNCTCC 4 cut(s) 35, 65, 953, 983
Bsc4I CCNNNNNNNGG 5 cut(s) 265, 355, 356, 653, 654
Bse21I CCTNAGG 1 cut(s) 664
Bse8I GATNNNNATC 1 cut(s) 431
BseBI CCWGG 1 cut(s) 472
BseDI CCNNGG 7 cut(s) 36, 295, 315, 384, 412, 805, 1107
BseGI GGATG 3 cut(s) 731, 1029, 1107
BseJI GATNNNNATC 1 cut(s) 431
BseLI CCNNNNNNNGG 5 cut(s) 265, 355, 356, 653, 654
BseMII CTCAG 1 cut(s) 317
BseRI GAGGAG 4 cut(s) 71, 76, 578, 872
BseSI GKGCMC 1 cut(s) 663
BseXI GCAGC 4 cut(s) 38, 41, 231, 731
Bsh1236I CGCG 3 cut(s) 38, 751, 899
BshFI GGCC 3 cut(s) 129, 730, 1228
BshNI GGYRCC 1 cut(s) 658
BsiHKCI CYCGRG 2 cut(s) 446, 902
BsiSI CCGG 4 cut(s) 350, 412, 735, 1011
BslFI GGGAC 1 cut(s) 803
BslI CCNNNNNNNGG 5 cut(s) 265, 355, 356, 653, 654
BsmFI GGGAC 1 cut(s) 803
BsmI GAATGC 1 cut(s) 196
BsnI GGCC 3 cut(s) 129, 730, 1228
BsoBI CYCGRG 2 cut(s) 446, 902
Bsp1286I GDGCHC 1 cut(s) 663
Bsp1407I TGTACA 1 cut(s) 1188
Bsp143I GATC 7 cut(s) 289, 393, 513, 643, 849, 1143, 1167
BspANI GGCC 3 cut(s) 129, 730, 1228
BspCNI CTCAG 1 cut(s) 318
BspFNI CGCG 3 cut(s) 38, 751, 899
BspHI TCATGA 1 cut(s) 516
BspLI GGNNCC 4 cut(s) 376, 602, 645, 660
BspPI GGATC 3 cut(s) 638, 651, 1175
BspT107I GGYRCC 1 cut(s) 658
BsrGI TGTACA 1 cut(s) 1188
BssECI CCNNGG 7 cut(s) 36, 295, 315, 384, 412, 805, 1107
BssMI GATC 7 cut(s) 289, 393, 513, 643, 849, 1143, 1167
BssNI GRCGYC 1 cut(s) 1175
BssSI CACGAG 1 cut(s) 509
BssT1I CCWWGG 2 cut(s) 315, 1107
Bst2BI CACGAG 1 cut(s) 509
Bst2UI CCWGG 1 cut(s) 472
Bst4CI ACNGT 6 cut(s) 272, 385, 487, 917, 1188, 1213
Bst6I CTCTTC 3 cut(s) 52, 137, 681
BstACI GRCGYC 1 cut(s) 1175
BstAPI GCANNNNNTGC 1 cut(s) 716
BstAUI TGTACA 1 cut(s) 1188
BstBAI YACGTR 1 cut(s) 829
BstC8I GCNNGC 6 cut(s) 205, 333, 812, 824, 1127, 1230
BstDEI CTNAG 5 cut(s) 326, 628, 664, 938, 1272
BstDSI CCRYGG 4 cut(s) 36, 295, 384, 805
BstF5I GGATG 3 cut(s) 731, 1029, 1107
BstFNI CGCG 3 cut(s) 38, 751, 899
BstHHI GCGC 2 cut(s) 901, 1016
BstKTI GATC 7 cut(s) 292, 396, 516, 646, 852, 1146, 1170
BstMBI GATC 7 cut(s) 289, 393, 513, 643, 849, 1143, 1167
BstMWI GCNNNNNNNGC 7 cut(s) 20, 23, 29, 32, 35, 200, 716
BstNI CCWGG 1 cut(s) 472
BstNSI RCATGY 1 cut(s) 995
BstSCI CCNGG 4 cut(s) 348, 411, 470, 1009
BstSLI GKGCMC 1 cut(s) 663
BstUI CGCG 3 cut(s) 38, 751, 899
BstV1I GCAGC 4 cut(s) 38, 41, 231, 731
BstV2I GAAGAC 1 cut(s) 317
BstX2I RGATCY 2 cut(s) 643, 1167
BstXI CCANNNNNNTGG 1 cut(s) 385
BstYI RGATCY 2 cut(s) 643, 1167
Bsu36I CCTNAGG 1 cut(s) 664
BsuRI GGCC 3 cut(s) 129, 730, 1228
BtgI CCRYGG 4 cut(s) 36, 295, 384, 805
BtrI CACGTC 1 cut(s) 403
BtsCI GGATG 3 cut(s) 731, 1029, 1107
BtsIMutI CAGTG 1 cut(s) 1184
Cac8I GCNNGC 6 cut(s) 205, 333, 812, 824, 1127, 1230
CciI TCATGA 1 cut(s) 516
CfoI GCGC 2 cut(s) 901, 1016
Cfr13I GGNCC 6 cut(s) 268, 375, 388, 409, 737, 1247
Cfr42I CCGCGG 1 cut(s) 39
Csp6I GTAC 1 cut(s) 1189
CspCI CAANNNNNGTGG 2 cut(s) 1239, 1274
CviAII CATG 5 cut(s) 55, 60, 517, 878, 992
CviQI GTAC 1 cut(s) 1189
DdeI CTNAG 5 cut(s) 326, 628, 664, 938, 1272
DpnI GATC 7 cut(s) 291, 395, 515, 645, 851, 1145, 1169
DpnII GATC 7 cut(s) 289, 393, 513, 643, 849, 1143, 1167
DrdI GACNNNNNNGTC 2 cut(s) 104, 116
DriI GACNNNNNGTC 1 cut(s) 352
DseDI GACNNNNNNGTC 2 cut(s) 104, 116
Eam1104I CTCTTC 3 cut(s) 52, 137, 681
Eam1105I GACNNNNNGTC 1 cut(s) 352
EarI CTCTTC 3 cut(s) 52, 137, 681
Eco130I CCWWGG 2 cut(s) 315, 1107
Eco147I AGGCCT 1 cut(s) 1228
Eco47I GGWCC 6 cut(s) 268, 375, 388, 409, 737, 1247
Eco81I CCTNAGG 1 cut(s) 664
Eco88I CYCGRG 2 cut(s) 446, 902
EcoRI GAATTC 1 cut(s) 1153
EcoRII CCWGG 1 cut(s) 470
EcoT14I CCWWGG 2 cut(s) 315, 1107
ErhI CCWWGG 2 cut(s) 315, 1107
FaeI CATG 5 cut(s) 58, 63, 520, 881, 995
FalI AAGNNNNNCTT 2 cut(s) 632, 664
FaqI GGGAC 1 cut(s) 803
FatI CATG 5 cut(s) 54, 59, 516, 877, 991
FauI CCCGC 5 cut(s) 175, 212, 270, 557, 803
FblI GTMKAC 2 cut(s) 96, 108
FokI GGATG 3 cut(s) 718, 1036, 1114
GlaI GCGC 2 cut(s) 900, 1015
HaeIII GGCC 3 cut(s) 129, 730, 1228
HapII CCGG 4 cut(s) 350, 412, 735, 1011
HhaI GCGC 2 cut(s) 901, 1016
Hin1I GRCGYC 1 cut(s) 1175
Hin1II CATG 5 cut(s) 58, 63, 520, 881, 995
Hin6I GCGC 2 cut(s) 899, 1014
HinP1I GCGC 2 cut(s) 899, 1014
HincII GTYRAC 2 cut(s) 97, 109
HindII GTYRAC 2 cut(s) 97, 109
HinfI GANTC 7 cut(s) 44, 320, 353, 791, 874, 894, 1180
HpaII CCGG 4 cut(s) 350, 412, 735, 1011
HphI GGTGA 3 cut(s) 176, 499, 874
Hpy166II GTNNAC 4 cut(s) 97, 109, 378, 805
Hpy188I TCNGA 3 cut(s) 217, 763, 1089
Hpy188III TCNNGA 6 cut(s) 391, 446, 448, 517, 1046, 1171
Hpy8I GTNNAC 4 cut(s) 97, 109, 378, 805
Hpy99I CGWCG 6 cut(s) 98, 110, 404, 425, 751, 1180
HpyAV CCTTC 5 cut(s) 521, 634, 676, 880, 1261
HpyCH4III ACNGT 6 cut(s) 272, 385, 487, 917, 1188, 1213
HpyCH4IV ACGT 6 cut(s) 69, 101, 402, 768, 828, 1175
HpyCH4V TGCA 8 cut(s) 63, 247, 281, 499, 719, 1071, 1216, 1232
HpyF10VI GCNNNNNNNGC 7 cut(s) 20, 23, 29, 32, 35, 200, 716
HpyF3I CTNAG 5 cut(s) 326, 628, 664, 938, 1272
HpySE526I ACGT 6 cut(s) 69, 101, 402, 768, 828, 1175
Hsp92I GRCGYC 1 cut(s) 1175
Hsp92II CATG 5 cut(s) 58, 63, 520, 881, 995
HspAI GCGC 2 cut(s) 899, 1014
KspI CCGCGG 1 cut(s) 39
Kzo9I GATC 7 cut(s) 289, 393, 513, 643, 849, 1143, 1167
LmnI GCTCC 1 cut(s) 218
Lsp1109I GCAGC 4 cut(s) 38, 41, 231, 731
LweI GCATC 1 cut(s) 486
MaeII ACGT 6 cut(s) 69, 101, 402, 768, 828, 1175
MaeIII GTNAC 2 cut(s) 544, 911
MalI GATC 7 cut(s) 291, 395, 515, 645, 851, 1145, 1169
MboI GATC 7 cut(s) 289, 393, 513, 643, 849, 1143, 1167
MboII GAAGA 6 cut(s) 39, 124, 322, 698, 859, 903
MflI RGATCY 2 cut(s) 643, 1167
MhlI GDGCHC 1 cut(s) 663
MluCI AATT 7 cut(s) 147, 338, 452, 714, 741, 1083, 1153
MlyI GAGTC 3 cut(s) 38, 362, 785
MmeI TCCRAC 2 cut(s) 240, 741
MseI TTAA 5 cut(s) 341, 429, 672, 1059, 1119
MslI CAYNNNNRTG 3 cut(s) 189, 383, 521
MspA1I CMGCKG 4 cut(s) 23, 38, 123, 244
MspI CCGG 4 cut(s) 350, 412, 735, 1011
MspR9I CCNGG 4 cut(s) 350, 413, 472, 1011
Mva1269I GAATGC 1 cut(s) 196
MvaI CCWGG 1 cut(s) 472
MvnI CGCG 3 cut(s) 38, 751, 899
MwoI GCNNNNNNNGC 7 cut(s) 20, 23, 29, 32, 35, 200, 716
NciI CCSGG 3 cut(s) 350, 413, 1011
NdeII GATC 7 cut(s) 289, 393, 513, 643, 849, 1143, 1167
NlaIII CATG 5 cut(s) 58, 63, 520, 881, 995
NlaIV GGNNCC 4 cut(s) 376, 602, 645, 660
NmuCI GTSAC 2 cut(s) 544, 911
NspI RCATGY 1 cut(s) 995
OliI CACNNNNGTG 1 cut(s) 383
PaeR7I CTCGAG 1 cut(s) 446
PagI TCATGA 1 cut(s) 516
PceI AGGCCT 1 cut(s) 1228
PciI ACATGT 1 cut(s) 991
PcsI WCGNNNNNNNCGW 4 cut(s) 102, 114, 491, 507
PctI GAATGC 1 cut(s) 196
PfeI GAWTC 4 cut(s) 320, 874, 894, 1180
PleI GAGTC 3 cut(s) 38, 361, 785
PpsI GAGTC 3 cut(s) 38, 361, 785
Ppu21I YACGTR 1 cut(s) 829
PscI ACATGT 1 cut(s) 991
PshBI ATTAAT 3 cut(s) 341, 1059, 1119
Psp6I CCWGG 1 cut(s) 470
PspGI CCWGG 1 cut(s) 470
PspN4I GGNNCC 4 cut(s) 376, 602, 645, 660
PspPI GGNCC 6 cut(s) 268, 375, 388, 409, 737, 1247
PsuI RGATCY 2 cut(s) 643, 1167
RsaI GTAC 1 cut(s) 1190
RsaNI GTAC 1 cut(s) 1189
RseI CAYNNNNRTG 3 cut(s) 189, 383, 521
SacII CCGCGG 1 cut(s) 39
SalI GTCGAC 2 cut(s) 95, 107
SaqAI TTAA 5 cut(s) 341, 429, 672, 1059, 1119
Sau3AI GATC 7 cut(s) 289, 393, 513, 643, 849, 1143, 1167
Sau96I GGNCC 6 cut(s) 268, 375, 388, 409, 737, 1247
SchI GAGTC 3 cut(s) 38, 362, 785
ScrFI CCNGG 4 cut(s) 350, 413, 472, 1011
SduI GDGCHC 1 cut(s) 663
SfaNI GCATC 1 cut(s) 486
Sfr274I CTCGAG 1 cut(s) 446
Sfr303I CCGCGG 1 cut(s) 39
SgrBI CCGCGG 1 cut(s) 39
SinI GGWCC 6 cut(s) 268, 375, 388, 409, 737, 1247
SlaI CTCGAG 1 cut(s) 446
SmiMI CAYNNNNRTG 3 cut(s) 189, 383, 521
SmlI CTYRAG 1 cut(s) 446
SmoI CTYRAG 1 cut(s) 446
Sse9I AATT 7 cut(s) 147, 338, 452, 714, 741, 1083, 1153
SseBI AGGCCT 1 cut(s) 1228
StuI AGGCCT 1 cut(s) 1228
StyD4I CCNGG 4 cut(s) 348, 411, 470, 1009
StyI CCWWGG 2 cut(s) 315, 1107
TaaI ACNGT 6 cut(s) 272, 385, 487, 917, 1188, 1213
TaiI ACGT 6 cut(s) 72, 104, 405, 771, 831, 1178
TaqI TCGA 5 cut(s) 96, 108, 345, 447, 1178
TasI AATT 7 cut(s) 147, 338, 452, 714, 741, 1083, 1153
TatI WGTACW 1 cut(s) 1188
TfiI GAWTC 4 cut(s) 320, 874, 894, 1180
Tru1I TTAA 5 cut(s) 341, 429, 672, 1059, 1119
Tru9I TTAA 5 cut(s) 341, 429, 672, 1059, 1119
TscAI CASTG 1 cut(s) 1191
TseFI GTSAC 2 cut(s) 544, 911
TseI GCWGC 4 cut(s) 26, 29, 244, 719
Tsp45I GTSAC 2 cut(s) 544, 911
TspDTI ATGAA 4 cut(s) 17, 533, 623, 866
TspGWI ACGGA 1 cut(s) 106
TspRI CASTG 1 cut(s) 1191
VpaK11BI GGWCC 6 cut(s) 268, 375, 388, 409, 737, 1247
VspI ATTAAT 3 cut(s) 341, 1059, 1119
XapI RAATTY 2 cut(s) 147, 1153
XceI RCATGY 1 cut(s) 995
XhoI CTCGAG 1 cut(s) 446
XmiI GTMKAC 2 cut(s) 96, 108
ZraI GACGTC 1 cut(s) 1176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.