AT1G19290

Pentacotripeptide-repeat region of PRORP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0010830
Physical Location & Seq
Forward (+)
6666074 .. 6669576
3503 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19290.2

Sequence Viewer

Length: 2715 bp
ATGCTCCGACGGTCTCCGGCACGCGTTGTTGCCTATCAGTTGCTTCCGTTTCTCTATACTCGTAGCTTCTCCGAAGCCTCGAGAACCTTACGCCGCGAGCTTCGAGGAGGAAACGGGCGAATTCGACCCGAATTACTCGAGCGGGTCTCACGTTTGCTCGTACTTGGCAGGTACGAAGCTTTACATGATCTATCACTCGATTTCTCAGATGAACTTCTCAACTCCATCCTGCGTAGATTGAGGCTTAACCCAGAGGCATGTCTGGAGATTTTCAATTTGGCTTCAAAGCAACAAAAGTTCCGGCCTGATTACAAGGCTTACTGTAAAATGGTTCACATCTTGTCCAGGGCTAGAAATTACCAACAGACAAAATCGTATTTATGTGAACTGGTTGCTCTTAATCACTCGGGCTTCGTTGTCTGGGGAGAGCTCGTTCGGGTTTTCAAGGAATTTTCCTTCTCTCCTACAGTCTTTGACATGATACTGAAAGTTTATGCAGAGAAGGGTTTGGTTAAGAATGCTTTACATGTGTTTGACAACATGGGAAACTATGGAAGAATTCCTAGTTTGTTGTCTTGTAATAGCTTGTTGAGCAATTTGGTCAGGAAAGGGGAAAACTTTGTGGCTTTACATGTTTATGATCAGATGATTAGCTTTGAGGTTTCTCCGGATGTGTTTACTTGCAGTATTGTTGTTAATGCTTATTGTAGAAGTGGGAATGTGGATAAAGCCATGGTATTTGCGAAAGAAACGGAGAGTTCATTGGGTTTGGAGCTGAATGTGGTAACTTACAATAGTTTGATCAATGGGTATGCTATGATCGGAGATGTTGAGGGAATGACAAGAGTGTTGCGGTTGATGTCTGAGAGAGGGGTTTCTAGGAACGTTGTTACGTATACTTCGTTGATTAAGGGTTACTGCAAAAAGGGTTTGATGGAAGAAGCGGAACATGTGTTTGAATTGCTAAAGGAAAAGAAACTTGTTGCGGATCAGCATATGTACGGTGTGTTGATGGATGGATATTGTCGTACTGGTCAAATCCGTGATGCTGTTAGGGTTCATGATAATATGATTGAGATAGGCGTAAGAACAAATACTACCATTTGTAACTCCTTGATCAATGGGTACTGCAAATCTGGTCAATTAGTTGAAGCGGAACAAATATTTTCTCGGATGAACGATTGGAGCTTGAAACCAGATCATCACACGTACAATACCCTTGTGGATGGGTATTGCAGGGCTGGTTATGTTGACGAGGCTTTAAAGCTTTGTGATCAAATGTGCCAAAAAGAAGTTGTACCAACAGTTATGACTTACAATATTCTGCTTAAAGGTTATAGTAGGATTGGTGCTTTTCATGATGTTTTGAGCCTTTGGAAGATGATGCTTAAAAGAGGCGTAAACGCCGATGAGATTAGTTGTAGCACCCTACTCGAAGCATTGTTCAAGCTTGGCGATTTTAATGAAGCTATGAAGCTGTGGGAGAATGTCTTAGCAAGAGGTCTATTGACTGATACGATAACATTAAATGTAATGATCAGTGGGCTGTGTAAAATGGAGAAGGTCAATGAAGCCAAAGAGATTCTAGATAATGTGAACATTTTCAGATGTAAGCCAGCTGTGCAAACATATCAAGCGTTGAGCCATGGGTATTATAAAGTCGGAAATTTGAAAGAAGCCTTTGCGGTTAAAGAGTATATGGAAAGGAAAGGAATCTTCCCCACCATAGAGATGTATAACACTCTGATATCTGGTGCTTTCAAATATAGACACTTGAATAAAGTAGCGGATCTTGTGATCGAGCTACGCGCAAGAGGATTAACTCCTACTGTTGCTACATATGGTGCTCTCATCACCGGCTGGTGCAATATTGGAATGATAGATAAAGCCTACGCTACATGTTTCGAAATGATAGAGAAAGGGATTACCTTAAATGTGAATATTTGCAGCAAGATTGCAAATAGTTTGTTTCGTCTTGATAAGATTGATGAGGCTTGTTTGCTATTGCAGAAGATTGTGGATTTTGATCTGCTTCTTCCCGGTTACCAGAGCTTGAAAGAGTTTCTTGAGGCCAGTGCTACGACGTGTCTTAAAACACAAAAAATCGCTGAGTCTGTCGAGAATAGCACCCCTAAGAAGCTCTTAGTTCCCAATAACATTGTTTACAATGTTGCTATCGCAGGTCTCTGTAAAGCTGGGAAACTCGAGGATGCTCGAAAACTCTTCTCGGATTTACTATCAAGTGATAGGTTTATTCCAGACGAATACACATACACGATCCTAATTCACGGATGTGCTATTGCTGGTGATATAAACAAAGCCTTTACCCTGAGGGATGAGATGGCTCTAAAAGGTATTATCCCGAACATTGTTACATACAACGCTTTGATAAAAGGCTTGTGCAAGTTGGGTAATGTAGATCGTGCTCAGAGGCTTTTACATAAGCTTCCACAGAAGGGCATAACTCCTAATGCTATTACCTATAACACATTAATTGATGGACTAGTTAAAAGTGGTAATGTTGCTGAAGCTATGCGTTTAAAAGAAAAAATGATTGAGAAAGGCTTGGTTAGAGGGTCCGATAAACAGGGGGATGTTGACATACCAAAGGAGGTGGTTTTGGATCCGGAAGTTAAATTGGGGAGCACAGGAGTGATCGAAATGAACTCAAATGAGCTTTATGATGTTAGGAGAGTTTCTGAAGCAGTAGTATGA

Protein Analysis

904

Amino Acids

101.86

Weight (kDa)

8.62

Isoelectric Point (pI)

29.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 188 - 237 3.9e-08 PPR repeat family
PPR_1 PF12854 221 - 247 3.2e-06 PPR repeat
PPR_2 PF13041 260 - 308 1.2e-14 PPR repeat family
PPR_3 PF13812 282 - 328 2.2e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 290 - 320 3.3e-11 PPR repeat
PPR_2 PF13041 294 - 340 2.4e-10 PPR repeat family
PPR PF01535 297 - 326 6.9e-09 PPR repeat
PPR_3 PF13812 353 - 408 4.1e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 365 - 413 1.2e-16 PPR repeat family
PPR PF01535 368 - 393 6e-07 PPR repeat
TPR_24 PF23276 369 - 496 1.1e-07 Fungal tetratrico peptide repeats
PPR_1 PF12854 370 - 392 3e-06 PPR repeat
PPR_long PF17177 382 - 488 2.8e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 388 - 446 6.8e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 396 - 427 1.8e-14 PPR repeat
PPR_2 PF13041 402 - 447 7.2e-15 PPR repeat family
PPR PF01535 403 - 430 2.2e-08 PPR repeat
PPR_2 PF13041 434 - 483 3e-10 PPR repeat family
PPR_2 PF13041 470 - 518 2.6e-09 PPR repeat family
PPR_1 PF12854 500 - 530 3.7e-06 PPR repeat
PPR_2 PF13041 505 - 551 4.2e-06 PPR repeat family
PPR_3 PF13812 528 - 584 2.1e-09 Pentatricopeptide repeat domain
PPR_2 PF13041 574 - 623 2.3e-08 PPR repeat family
PPR_1 PF12854 605 - 633 9.7e-06 PPR repeat
PPR_1 PF12854 715 - 743 3.5e-07 PPR repeat
PPR_2 PF13041 717 - 766 3.7e-13 PPR repeat family
PPR_long PF17177 735 - 849 8.6e-09 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 745 - 847 8.2e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 751 - 798 2e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 753 - 781 1.8e-07 PPR repeat
PPR_2 PF13041 753 - 802 2.1e-15 PPR repeat family
PPR_1 PF12854 784 - 815 6.6e-12 PPR repeat
PPR_2 PF13041 788 - 837 1.6e-17 PPR repeat family
PPR PF01535 791 - 821 7.7e-07 PPR repeat
PPR_1 PF12854 819 - 851 5e-11 PPR repeat
PPR_2 PF13041 823 - 856 7.2e-08 PPR repeat family
PPR PF01535 826 - 856 1.8e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0010830)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19290 AT1G19290
fragaria_vesca FvH4_2g40380 FvH4_2g40380
malus_domestica MD15G1444300.v1.1
prunus_persica Prupe.1G585600_v2.0.a1
pyrus_communis pycom15g39140
rosa_chinensis RchiOBHm_Chr3g0486911 RchiOBHm_Chr6g0300361
rosa_laevigata RLG00000011344
rosa_multiflora Rmu_sc0001670.1_g000017
rosa_roxburghii Rroxscaffold_2G00128300 Rroxscaffold_7G00167860
rosa_rugosa Rorug06G0295300
rosa_samantha Rh3AG278100 Rh6AG408100 Rh6BG415400 Rh6CG422800 Rh6DG408400
rosa_wichuraiana Rw6G035690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1656
Acc36I ACCTGC 2 cut(s) 159, 2171
AccBSI CCGCTC 1 cut(s) 142
AccI GTMKAC 1 cut(s) 896
AccII CGCG 3 cut(s) 24, 96, 1809
AccIII TCCGGA 2 cut(s) 667, 2626
AciI CCGC 8 cut(s) 94, 142, 853, 944, 986, 1154, 1685, 1787
AclI AACGTT 1 cut(s) 885
AclWI GGATC 5 cut(s) 996, 1797, 2272, 2618, 2631
AcsI RAATTY 4 cut(s) 120, 449, 558, 1666
AcuI CTGAAG 1 cut(s) 2547
AfaI GTAC 7 cut(s) 162, 173, 1001, 1030, 1127, 1211, 1299
AfiI CCNNNNNNNGG 1 cut(s) 2456
AflIII ACRYGT 7 cut(s) 22, 526, 631, 949, 1206, 1898, 2084
AhlI ACTAGT 1 cut(s) 2503
AjiI CACGTC 1 cut(s) 2085
AjnI CCWGG 1 cut(s) 344
AleI CACNNNNGTG 2 cut(s) 2292, 2651
AloI GAACNNNNNNTCC 2 cut(s) 417, 449
Alw21I GWGCWC 4 cut(s) 432, 1849, 2428, 2648
Alw26I GTCTC 3 cut(s) 18, 151, 2189
AlwI GGATC 5 cut(s) 996, 1797, 2272, 2618, 2631
Ama87I CYCGRG 4 cut(s) 79, 137, 406, 2204
Aor13HI TCCGGA 2 cut(s) 667, 2626
AoxI GGCC 2 cut(s) 302, 2070
ApeKI GCWGC 1 cut(s) 1947
ApoI RAATTY 4 cut(s) 120, 449, 558, 1666
AseI ATTAAT 1 cut(s) 2492
Asp700I GAANNNNTTC 1 cut(s) 1601
AspLEI GCGC 1 cut(s) 1811
AspS9I GGNCC 1 cut(s) 2577
AsuC2I CCSGG 1 cut(s) 2040
AsuHPI GGTGA 2 cut(s) 1846, 2318
AsuII TTCGAA 1 cut(s) 1905
AvaI CYCGRG 4 cut(s) 79, 137, 406, 2204
AvaII GGWCC 1 cut(s) 2577
AxyI CCTNAGG 1 cut(s) 2330
BamHI GGATCC 1 cut(s) 2623
BanII GRGCYC 1 cut(s) 432
Bbv12I GWGCWC 4 cut(s) 432, 1849, 2428, 2648
BbvI GCAGC 1 cut(s) 1959
BccI CCATC 7 cut(s) 233, 928, 1006, 1010, 1220, 2335, 2492
BcgI CGANNNNNNTGC 2 cut(s) 1414, 1448
BciT130I CCWGG 1 cut(s) 346
BclI TGATCA 5 cut(s) 640, 801, 1116, 1273, 1536
BcnI CCSGG 1 cut(s) 2040
BcoDI GTCTC 3 cut(s) 18, 151, 2189
BcuI ACTAGT 1 cut(s) 2503
BfaI CTAG 5 cut(s) 351, 564, 879, 1586, 2504
BfmI CTRYAG 1 cut(s) 465
BfuAI ACCTGC 2 cut(s) 159, 2171
BisI GCNGC 2 cut(s) 94, 1948
BlsI GCNGC 2 cut(s) 95, 1949
Bme1390I CCNGG 2 cut(s) 346, 2040
Bme18I GGWCC 1 cut(s) 2577
BmeT110I CYCGRG 4 cut(s) 79, 137, 406, 2204
BmgBI CACGTC 1 cut(s) 2085
BmgT120I GGNCC 1 cut(s) 2577
BmiI GGNNCC 2 cut(s) 2578, 2625
BmrFI CCNGG 2 cut(s) 346, 2040
BmsI GCATC 3 cut(s) 1036, 1374, 2200
BplI GAGNNNNNCTC 2 cut(s) 131, 163
BpmI CTGGAG 1 cut(s) 284
Bpu14I TTCGAA 1 cut(s) 1905
BpuEI CTTGAG 1 cut(s) 2087
BpuMI CCSGG 1 cut(s) 2040
BsaAI YACGTR 2 cut(s) 894, 1209
BsaBI GATNNNNATC 1 cut(s) 2025
BsaI GGTCTC 3 cut(s) 18, 151, 2189
BsaJI CCNNGG 3 cut(s) 345, 732, 1645
BsaWI WCCGGW 2 cut(s) 667, 2626
BsaXI ACNNNNNCTCC 2 cut(s) 417, 447
Bsc4I CCNNNNNNNGG 1 cut(s) 2456
Bse118I RCCGGY 1 cut(s) 1856
Bse1I ACTGG 3 cut(s) 393, 1036, 2073
Bse21I CCTNAGG 1 cut(s) 2330
Bse8I GATNNNNATC 1 cut(s) 2025
BseAI TCCGGA 2 cut(s) 667, 2626
BseBI CCWGG 1 cut(s) 346
BseDI CCNNGG 3 cut(s) 345, 732, 1645
BseGI GGATG 9 cut(s) 225, 676, 1021, 1179, 1231, 2215, 2297, 2341, 2599
BseJI GATNNNNATC 1 cut(s) 2025
BseLI CCNNNNNNNGG 1 cut(s) 2456
BseMII CTCAG 5 cut(s) 219, 855, 2100, 2321, 2441
BseNI ACTGG 3 cut(s) 393, 1036, 2073
BseRI GAGGAG 1 cut(s) 120
BseXI GCAGC 1 cut(s) 1959
BseYI CCCAGC 1 cut(s) 2195
Bsh1236I CGCG 3 cut(s) 24, 96, 1809
BshFI GGCC 2 cut(s) 304, 2072
BsiHKAI GWGCWC 4 cut(s) 432, 1849, 2428, 2648
BsiHKCI CYCGRG 4 cut(s) 79, 137, 406, 2204
BsiSI CCGG 6 cut(s) 17, 301, 668, 1857, 2040, 2627
BslI CCNNNNNNNGG 1 cut(s) 2456
BsmAI GTCTC 3 cut(s) 18, 151, 2189
BsmI GAATGC 1 cut(s) 523
BsnI GGCC 2 cut(s) 304, 2072
Bso31I GGTCTC 3 cut(s) 18, 151, 2189
BsoBI CYCGRG 4 cut(s) 79, 137, 406, 2204
Bsp119I TTCGAA 1 cut(s) 1905
Bsp1286I GDGCHC 4 cut(s) 432, 1849, 2428, 2648
Bsp13I TCCGGA 2 cut(s) 667, 2626
Bsp19I CCATGG 2 cut(s) 732, 1645
BspACI CCGC 8 cut(s) 94, 142, 853, 944, 986, 1154, 1685, 1787
BspANI GGCC 2 cut(s) 304, 2072
BspCNI CTCAG 5 cut(s) 218, 856, 2101, 2322, 2440
BspEI TCCGGA 2 cut(s) 667, 2626
BspFNI CGCG 3 cut(s) 24, 96, 1809
BspHI TCATGA 2 cut(s) 1060, 1357
BspLI GGNNCC 2 cut(s) 2578, 2625
BspMI ACCTGC 2 cut(s) 159, 2171
BspPI GGATC 5 cut(s) 996, 1797, 2272, 2618, 2631
BspT104I TTCGAA 1 cut(s) 1905
BspTNI GGTCTC 3 cut(s) 18, 151, 2189
BsrBI CCGCTC 1 cut(s) 142
BsrFI RCCGGY 1 cut(s) 1856
BsrI ACTGG 3 cut(s) 393, 1036, 2073
BssAI RCCGGY 1 cut(s) 1856
BssECI CCNNGG 3 cut(s) 345, 732, 1645
BssNAI GTATAC 1 cut(s) 897
BssT1I CCWWGG 2 cut(s) 732, 1645
Bst1107I GTATAC 1 cut(s) 897
Bst2UI CCWGG 1 cut(s) 346
Bst4CI ACNGT 6 cut(s) 12, 323, 469, 1004, 1306, 1831
Bst6I CTCTTC 1 cut(s) 2228
BstBAI YACGTR 2 cut(s) 894, 1209
BstBI TTCGAA 1 cut(s) 1905
BstC8I GCNNGC 3 cut(s) 22, 98, 1617
BstDEI CTNAG 8 cut(s) 205, 864, 1492, 2109, 2133, 2143, 2330, 2427
BstDSI CCRYGG 2 cut(s) 732, 1645
BstEII GGTNACC 1 cut(s) 2042
BstF5I GGATG 9 cut(s) 225, 676, 1021, 1179, 1231, 2215, 2297, 2341, 2599
BstFNI CGCG 3 cut(s) 24, 96, 1809
BstHHI GCGC 1 cut(s) 1811
BstMAI GTCTC 3 cut(s) 18, 151, 2189
BstMWI GCNNNNNNNGC 2 cut(s) 591, 1621
BstNI CCWGG 1 cut(s) 346
BstNSI RCATGY 5 cut(s) 261, 530, 635, 953, 1902
BstPI GGTNACC 1 cut(s) 2042
BstSCI CCNGG 2 cut(s) 344, 2038
BstSFI CTRYAG 1 cut(s) 465
BstSNI TACGTA 1 cut(s) 894
BstUI CGCG 3 cut(s) 24, 96, 1809
BstV1I GCAGC 1 cut(s) 1959
BstX2I RGATCY 2 cut(s) 1789, 2623
BstYI RGATCY 2 cut(s) 1789, 2623
BstZ17I GTATAC 1 cut(s) 897
Bsu36I CCTNAGG 1 cut(s) 2330
BsuRI GGCC 2 cut(s) 304, 2072
BtgI CCRYGG 2 cut(s) 732, 1645
BtrI CACGTC 1 cut(s) 2085
BtsCI GGATG 9 cut(s) 225, 676, 1021, 1179, 1231, 2215, 2297, 2341, 2599
BtsIMutI CAGTG 2 cut(s) 1546, 2080
BveI ACCTGC 2 cut(s) 159, 2171
Cac8I GCNNGC 3 cut(s) 22, 98, 1617
CciI TCATGA 2 cut(s) 1060, 1357
CfoI GCGC 1 cut(s) 1811
Cfr10I RCCGGY 1 cut(s) 1856
Cfr13I GGNCC 1 cut(s) 2577
Csp6I GTAC 7 cut(s) 161, 172, 1000, 1029, 1126, 1210, 1298
CspCI CAANNNNNGTGG 2 cut(s) 2595, 2630
CviQI GTAC 7 cut(s) 161, 172, 1000, 1029, 1126, 1210, 1298
DdeI CTNAG 8 cut(s) 205, 864, 1492, 2109, 2133, 2143, 2330, 2427
DraI TTTAAA 2 cut(s) 1263, 2541
Eam1104I CTCTTC 1 cut(s) 2228
EarI CTCTTC 1 cut(s) 2228
Ecl136II GAGCTC 1 cut(s) 430
Eco105I TACGTA 1 cut(s) 894
Eco130I CCWWGG 2 cut(s) 732, 1645
Eco24I GRGCYC 1 cut(s) 432
Eco31I GGTCTC 3 cut(s) 18, 151, 2189
Eco32I GATATC 1 cut(s) 1749
Eco47I GGWCC 1 cut(s) 2577
Eco53kI GAGCTC 1 cut(s) 430
Eco57I CTGAAG 1 cut(s) 2547
Eco81I CCTNAGG 1 cut(s) 2330
Eco88I CYCGRG 4 cut(s) 79, 137, 406, 2204
Eco91I GGTNACC 1 cut(s) 2042
EcoICRI GAGCTC 1 cut(s) 430
EcoO65I GGTNACC 1 cut(s) 2042
EcoRI GAATTC 2 cut(s) 120, 558
EcoRII CCWGG 1 cut(s) 344
EcoRV GATATC 1 cut(s) 1749
EcoT14I CCWWGG 2 cut(s) 732, 1645
EcoT38I GRGCYC 1 cut(s) 432
ErhI CCWWGG 2 cut(s) 732, 1645
FalI AAGNNNNNCTT 4 cut(s) 2049, 2081, 2126, 2158
FauI CCCGC 1 cut(s) 135
FauNDI CATATG 2 cut(s) 996, 1840
FbaI TGATCA 5 cut(s) 640, 801, 1116, 1273, 1536
FblI GTMKAC 1 cut(s) 896
Fnu4HI GCNGC 2 cut(s) 94, 1948
FokI GGATG 9 cut(s) 212, 683, 1028, 1186, 1238, 2222, 2304, 2348, 2606
FriOI GRGCYC 1 cut(s) 432
Fsp4HI GCNGC 2 cut(s) 94, 1948
FspBI CTAG 5 cut(s) 351, 564, 879, 1586, 2504
GlaI GCGC 1 cut(s) 1810
GluI GCNGC 2 cut(s) 94, 1948
GsaI CCCAGC 1 cut(s) 2199
GsuI CTGGAG 1 cut(s) 284
HaeIII GGCC 2 cut(s) 304, 2072
HapII CCGG 6 cut(s) 17, 301, 668, 1857, 2040, 2627
HhaI GCGC 1 cut(s) 1811
Hin6I GCGC 1 cut(s) 1809
HinP1I GCGC 1 cut(s) 1809
HincII GTYRAC 2 cut(s) 1252, 2599
HindII GTYRAC 2 cut(s) 1252, 2599
HindIII AAGCTT 4 cut(s) 177, 1265, 1448, 2444
HinfI GANTC 3 cut(s) 1582, 1713, 2111
HpaII CCGG 6 cut(s) 17, 301, 668, 1857, 2040, 2627
HphI GGTGA 2 cut(s) 1846, 2318
Hpy166II GTNNAC 9 cut(s) 334, 386, 678, 897, 1252, 1402, 1597, 2164, 2599
Hpy8I GTNNAC 9 cut(s) 334, 386, 678, 897, 1252, 1402, 1597, 2164, 2599
Hpy99I CGWCG 2 cut(s) 12, 2086
HpyAV CCTTC 4 cut(s) 466, 496, 1555, 2449
HpyCH4III ACNGT 6 cut(s) 12, 323, 469, 1004, 1306, 1831
HpyCH4IV ACGT 5 cut(s) 151, 885, 893, 1208, 2084
HpyF10VI GCNNNNNNNGC 2 cut(s) 591, 1621
HpyF3I CTNAG 8 cut(s) 205, 864, 1492, 2109, 2133, 2143, 2330, 2427
HpySE526I ACGT 5 cut(s) 151, 885, 893, 1208, 2084
HspAI GCGC 1 cut(s) 1809
Kpn2I TCCGGA 2 cut(s) 667, 2626
Ksp22I TGATCA 5 cut(s) 640, 801, 1116, 1273, 1536
LmnI GCTCC 4 cut(s) 9, 772, 1185, 2643
Lsp1109I GCAGC 1 cut(s) 1959
LweI GCATC 3 cut(s) 1036, 1374, 2200
MaeI CTAG 5 cut(s) 351, 564, 879, 1586, 2504
MaeII ACGT 5 cut(s) 151, 885, 893, 1208, 2084
MaeIII GTNAC 6 cut(s) 784, 889, 914, 1106, 2042, 2371
MbiI CCGCTC 1 cut(s) 142
MboII GAAGA 7 cut(s) 567, 950, 1390, 1708, 2023, 2027, 2215
MflI RGATCY 2 cut(s) 1789, 2623
MhlI GDGCHC 4 cut(s) 432, 1849, 2428, 2648
MluI ACGCGT 1 cut(s) 22
MlyI GAGTC 1 cut(s) 2120
MmeI TCCRAC 2 cut(s) 31, 1642
MroI TCCGGA 2 cut(s) 667, 2626
MroXI GAANNNNTTC 1 cut(s) 1601
MslI CAYNNNNRTG 4 cut(s) 636, 1730, 2292, 2651
MspA1I CMGCKG 1 cut(s) 1619
MspI CCGG 6 cut(s) 17, 301, 668, 1857, 2040, 2627
MspR9I CCNGG 2 cut(s) 346, 2040
Mva1269I GAATGC 1 cut(s) 523
MvaI CCWGG 1 cut(s) 346
MvnI CGCG 3 cut(s) 24, 96, 1809
MwoI GCNNNNNNNGC 2 cut(s) 591, 1621
NciI CCSGG 1 cut(s) 2040
NcoI CCATGG 2 cut(s) 732, 1645
NdeI CATATG 2 cut(s) 996, 1840
NlaIV GGNNCC 2 cut(s) 2578, 2625
NspI RCATGY 5 cut(s) 261, 530, 635, 953, 1902
NspV TTCGAA 1 cut(s) 1905
OliI CACNNNNGTG 2 cut(s) 2292, 2651
PaeR7I CTCGAG 3 cut(s) 79, 137, 2204
PagI TCATGA 2 cut(s) 1060, 1357
PciI ACATGT 4 cut(s) 526, 631, 949, 1898
PcsI WCGNNNNNNNCGW 1 cut(s) 899
PctI GAATGC 1 cut(s) 523
PdmI GAANNNNTTC 1 cut(s) 1601
PfeI GAWTC 2 cut(s) 1582, 1713
PkrI GCNGC 2 cut(s) 95, 1949
PleI GAGTC 1 cut(s) 2119
PpsI GAGTC 1 cut(s) 2119
Ppu21I YACGTR 2 cut(s) 894, 1209
PscI ACATGT 4 cut(s) 526, 631, 949, 1898
PshBI ATTAAT 1 cut(s) 2492
PsiI TTATAA 1 cut(s) 1656
Psp124BI GAGCTC 1 cut(s) 432
Psp1406I AACGTT 1 cut(s) 885
Psp6I CCWGG 1 cut(s) 344
PspEI GGTNACC 1 cut(s) 2042
PspFI CCCAGC 1 cut(s) 2195
PspGI CCWGG 1 cut(s) 344
PspN4I GGNNCC 2 cut(s) 2578, 2625
PspPI GGNCC 1 cut(s) 2577
PspXI VCTCGAGB 2 cut(s) 137, 2204
PsrI GAACNNNNNNTAC 2 cut(s) 1081, 1113
PsuI RGATCY 2 cut(s) 1789, 2623
PvuII CAGCTG 1 cut(s) 1619
RsaI GTAC 7 cut(s) 162, 173, 1001, 1030, 1127, 1211, 1299
RsaNI GTAC 7 cut(s) 161, 172, 1000, 1029, 1126, 1210, 1298
RseI CAYNNNNRTG 4 cut(s) 636, 1730, 2292, 2651
SacI GAGCTC 1 cut(s) 432
SatI GCNGC 2 cut(s) 94, 1948
Sau96I GGNCC 1 cut(s) 2577
SchI GAGTC 1 cut(s) 2120
ScrFI CCNGG 2 cut(s) 346, 2040
SduI GDGCHC 4 cut(s) 432, 1849, 2428, 2648
SfaNI GCATC 3 cut(s) 1036, 1374, 2200
SfcI CTRYAG 1 cut(s) 465
Sfr274I CTCGAG 3 cut(s) 79, 137, 2204
SfuI TTCGAA 1 cut(s) 1905
SinI GGWCC 1 cut(s) 2577
SlaI CTCGAG 3 cut(s) 79, 137, 2204
SmiMI CAYNNNNRTG 4 cut(s) 636, 1730, 2292, 2651
SmlI CTYRAG 4 cut(s) 79, 137, 2066, 2204
SmoI CTYRAG 4 cut(s) 79, 137, 2066, 2204
SnaBI TACGTA 1 cut(s) 894
SpeI ACTAGT 1 cut(s) 2503
SsiI CCGC 8 cut(s) 94, 142, 853, 944, 986, 1154, 1685, 1787
SspI AATATT 4 cut(s) 1164, 1321, 1870, 1942
SspMI CTAG 5 cut(s) 351, 564, 879, 1586, 2504
SstI GAGCTC 1 cut(s) 432
StyD4I CCNGG 2 cut(s) 344, 2038
StyI CCWWGG 2 cut(s) 732, 1645
TaaI ACNGT 6 cut(s) 12, 323, 469, 1004, 1306, 1831
TaiI ACGT 5 cut(s) 154, 888, 896, 1211, 2087
TauI GCSGC 1 cut(s) 96
TfiI GAWTC 2 cut(s) 1582, 1713
TscAI CASTG 2 cut(s) 1546, 2080
TseI GCWGC 1 cut(s) 1947
TspDTI ATGAA 9 cut(s) 225, 750, 1049, 1190, 1346, 1479, 1487, 1584, 2678
TspGWI ACGGA 4 cut(s) 36, 767, 1031, 2304
TspRI CASTG 2 cut(s) 1546, 2080
VpaK11BI GGWCC 1 cut(s) 2577
VspI ATTAAT 1 cut(s) 2492
XapI RAATTY 4 cut(s) 120, 449, 558, 1666
XbaI TCTAGA 1 cut(s) 1585
XceI RCATGY 5 cut(s) 261, 530, 635, 953, 1902
XhoI CTCGAG 3 cut(s) 79, 137, 2204
XmiI GTMKAC 1 cut(s) 896
XmnI GAANNNNTTC 1 cut(s) 1601
XspI CTAG 5 cut(s) 351, 564, 879, 1586, 2504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.