AT1G19550

Glutathione S-transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014133
Physical Location & Seq
Reverse (-)
6767451 .. 6768158
708 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19550.1

Sequence Viewer

Length: 462 bp
ATGCTTGTCGTCCAAATTTGCTCTTCTCCATCACACGAGATGTTCTGGGACATTAGTCCTCAAGGGAAAGTACCAGTGCTTAAGATCGACGACAAGTGGGTGACTGATTCCGACGCCACCGTTGGTATCCTCGAGGAGAAGTATCCTGATCCACCTCTCAAGACTCCTGCTGAATTTGCCTCTGTTGGCTCCAACATTTTCGAAGCTTTGGAGAACCATCTCAAGAGTCACGATGGTCCTTTTATCGCCGGGGAAAGAGTTTCCGCGGTGGATCTTAGCTTAGCACCAAAGCTTTACCACCTTCAAGTTGCTCTTGGCCATTTCAAAAGCTGGTCTGTCCCTGAGAGCTTTCCCCATGTCCATAACTACATGAAGACTCTGTTCTCGCTCGACTCTTTTGAGAAAACTAAGACCGAGGAAAAGTGTGTGATCTCTGGATGGGCTCCCAAGGTCAACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005777 GO:0005829 GO:0005886 GO:0005975 GO:0005996 GO:0006082 GO:0006464 GO:0006518 GO:0006575 GO:0006732 GO:0006749 GO:0006766 GO:0006767 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009636 GO:0009719 GO:0009725 GO:0009753 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0010193 GO:0010646 GO:0010647 GO:0010731 GO:0015036 GO:0015037 GO:0015038 GO:0016020 GO:0016209 GO:0016491 GO:0016667 GO:0016672 GO:0016740 GO:0016765 GO:0016999 GO:0017001 GO:0017144 GO:0019538 GO:0019752 GO:0019852 GO:0023051 GO:0023056 GO:0033218 GO:0033355 GO:0033554 GO:0034599 GO:0034614 GO:0034641 GO:0035690 GO:0036211 GO:0042221 GO:0042277 GO:0042493 GO:0042542 GO:0042579 GO:0042737 GO:0042743 GO:0042744 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043412 GO:0043436 GO:0043603 GO:0043900 GO:0043903 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045174 GO:0046677 GO:0046872 GO:0046914 GO:0048037 GO:0048046 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051187 GO:0051704 GO:0051707 GO:0051716 GO:0055114 GO:0065007 GO:0070301 GO:0070887 GO:0071236 GO:0071704 GO:0071944 GO:0072341 GO:0072593 GO:0080151 GO:0097237 GO:0098754 GO:0098869 GO:1900750 GO:1901564 GO:1901681 GO:1901700 GO:1901701 GO:1990748 GO:2000031 GO:2001023 GO:2001025 GO:2001038 GO:2001040
KEGG Pathways
Metabolic & Signaling
ko00053 ko00480 ko01100 map00053 map00480 map01100
Pfam Domains
Protein Families
GST_C_2 GST_N_3

Protein Analysis

153

Amino Acids

17.06

Weight (kDa)

5.58

Isoelectric Point (pI)

40.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N_3 PF13417 12 - 52 3.5e-06 Glutathione S-transferase, N-terminal domain
GST_C_2 PF13410 65 - 125 2.9e-10 Glutathione S-transferase, C-terminal domain
GST_C PF00043 65 - 130 1.2e-07 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19550 AT1G19570 AT1G75270
fragaria_vesca FvH4_7g19940
malus_domestica MD01G1120300.v1.1 MD07G1189500.v1.1
prunus_persica Prupe.2G227100_v2.0.a1
pyrus_communis pycom01g14680
rosa_chinensis RchiOBHm_Chr1g0365431
rosa_laevigata RLG00000027422
rosa_multiflora Rmu_sc0002587.1_g000002
rosa_roxburghii Rroxscaffold_4G00291240
rosa_rugosa Rorug01G0322100
rosa_samantha Rh1BG292300 Rh1CG308800 Rh1DG323900
rosa_wichuraiana Rw1G029330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 131
AccII CGCG 1 cut(s) 266
AciI CCGC 2 cut(s) 264, 266
AclWI GGATC 2 cut(s) 143, 279
AcoI YGGCCR 1 cut(s) 316
AcsI RAATTY 2 cut(s) 15, 173
AcyI GRCGYC 1 cut(s) 114
AfaI GTAC 1 cut(s) 72
AflII CTTAAG 1 cut(s) 80
AgsI TTSAA 2 cut(s) 305, 325
AluBI AGCT 5 cut(s) 206, 279, 292, 330, 348
AluI AGCT 5 cut(s) 206, 279, 292, 330, 348
AlwI GGATC 2 cut(s) 143, 279
Ama87I CYCGRG 1 cut(s) 131
AoxI GGCC 1 cut(s) 316
ApoI RAATTY 2 cut(s) 15, 173
AspS9I GGNCC 1 cut(s) 236
AsuC2I CCSGG 1 cut(s) 250
AsuHPI GGTGA 1 cut(s) 112
AsuII TTCGAA 1 cut(s) 201
AvaI CYCGRG 1 cut(s) 131
AvaII GGWCC 1 cut(s) 236
BalI TGGCCA 1 cut(s) 318
BanII GRGCYC 1 cut(s) 445
BauI CACGAG 1 cut(s) 35
BbsI GAAGAC 1 cut(s) 380
BccI CCATC 4 cut(s) 37, 225, 227, 432
BciVI GTATCC 2 cut(s) 137, 153
BcnI CCSGG 1 cut(s) 250
BfrI CTTAAG 1 cut(s) 80
BfuI GTATCC 2 cut(s) 137, 153
BlpI GCTNAGC 1 cut(s) 280
Bme1390I CCNGG 1 cut(s) 250
Bme18I GGWCC 1 cut(s) 236
BmeT110I CYCGRG 1 cut(s) 131
BmgT120I GGNCC 1 cut(s) 236
BmiI GGNNCC 2 cut(s) 190, 444
BmrFI CCNGG 1 cut(s) 250
BoxI GACNNNNGTC 1 cut(s) 54
BpiI GAAGAC 1 cut(s) 380
Bpu1102I GCTNAGC 1 cut(s) 280
Bpu14I TTCGAA 1 cut(s) 201
BpuEI CTTGAG 3 cut(s) 45, 143, 206
BpuMI CCSGG 1 cut(s) 250
BsaHI GRCGYC 1 cut(s) 114
BsaJI CCNNGG 4 cut(s) 249, 264, 414, 447
Bse1I ACTGG 1 cut(s) 74
BseDI CCNNGG 4 cut(s) 249, 264, 414, 447
BseGI GGATG 1 cut(s) 443
BseMII CTCAG 1 cut(s) 333
BseNI ACTGG 1 cut(s) 74
BseRI GAGGAG 1 cut(s) 149
Bsh1236I CGCG 1 cut(s) 266
BshFI GGCC 1 cut(s) 318
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 1 cut(s) 249
BslFI GGGAC 2 cut(s) 62, 323
BsmFI GGGAC 2 cut(s) 62, 323
BsnI GGCC 1 cut(s) 318
BsoBI CYCGRG 1 cut(s) 131
Bsp119I TTCGAA 1 cut(s) 201
Bsp1286I GDGCHC 1 cut(s) 445
Bsp143I GATC 4 cut(s) 84, 148, 271, 429
Bsp1720I GCTNAGC 1 cut(s) 280
BspACI CCGC 2 cut(s) 264, 266
BspANI GGCC 1 cut(s) 318
BspCNI CTCAG 1 cut(s) 334
BspFNI CGCG 1 cut(s) 266
BspLI GGNNCC 2 cut(s) 190, 444
BspPI GGATC 2 cut(s) 143, 279
BspQI GCTCTTC 1 cut(s) 28
BspT104I TTCGAA 1 cut(s) 201
BspTI CTTAAG 1 cut(s) 80
BsrI ACTGG 1 cut(s) 74
BssECI CCNNGG 4 cut(s) 249, 264, 414, 447
BssMI GATC 4 cut(s) 84, 148, 271, 429
BssNI GRCGYC 1 cut(s) 114
BssSI CACGAG 1 cut(s) 35
BssT1I CCWWGG 1 cut(s) 447
Bst2BI CACGAG 1 cut(s) 35
Bst4CI ACNGT 1 cut(s) 121
Bst6I CTCTTC 1 cut(s) 28
BstACI GRCGYC 1 cut(s) 114
BstAFI CTTAAG 1 cut(s) 80
BstBI TTCGAA 1 cut(s) 201
BstDEI CTNAG 4 cut(s) 275, 280, 342, 408
BstDSI CCRYGG 1 cut(s) 264
BstF5I GGATG 1 cut(s) 443
BstFNI CGCG 1 cut(s) 266
BstKTI GATC 4 cut(s) 87, 151, 274, 432
BstMBI GATC 4 cut(s) 84, 148, 271, 429
BstMWI GCNNNNNNNGC 1 cut(s) 176
BstPAI GACNNNNGTC 1 cut(s) 54
BstSCI CCNGG 1 cut(s) 248
BstUI CGCG 1 cut(s) 266
BstV2I GAAGAC 1 cut(s) 380
BstX2I RGATCY 1 cut(s) 271
BstYI RGATCY 1 cut(s) 271
BsuI GTATCC 2 cut(s) 137, 153
BsuRI GGCC 1 cut(s) 318
BtgI CCRYGG 1 cut(s) 264
BtsCI GGATG 1 cut(s) 443
BtsIMutI CAGTG 1 cut(s) 81
Cfr13I GGNCC 1 cut(s) 236
Cfr42I CCGCGG 1 cut(s) 267
CseI GACGC 1 cut(s) 122
Csp6I GTAC 1 cut(s) 71
CviAII CATG 2 cut(s) 356, 370
CviJI RGCY 8 cut(s) 189, 206, 279, 292, 318, 330, 348, 443
CviKI_1 RGCY 8 cut(s) 189, 206, 279, 292, 318, 330, 348, 443
CviQI GTAC 1 cut(s) 71
DdeI CTNAG 4 cut(s) 275, 280, 342, 408
DpnI GATC 4 cut(s) 86, 150, 273, 431
DpnII GATC 4 cut(s) 84, 148, 271, 429
EaeI YGGCCR 1 cut(s) 316
Eam1104I CTCTTC 1 cut(s) 28
EarI CTCTTC 1 cut(s) 28
Eco130I CCWWGG 1 cut(s) 447
Eco24I GRGCYC 1 cut(s) 445
Eco47I GGWCC 1 cut(s) 236
Eco88I CYCGRG 1 cut(s) 131
EcoT14I CCWWGG 1 cut(s) 447
EcoT38I GRGCYC 1 cut(s) 445
ErhI CCWWGG 1 cut(s) 447
FaeI CATG 2 cut(s) 359, 373
FaiI YATR 3 cut(s) 357, 363, 371
FalI AAGNNNNNCTT 2 cut(s) 297, 329
FaqI GGGAC 2 cut(s) 62, 323
FatI CATG 2 cut(s) 355, 369
FokI GGATG 1 cut(s) 450
FriOI GRGCYC 1 cut(s) 445
HaeIII GGCC 1 cut(s) 318
HapII CCGG 1 cut(s) 249
HgaI GACGC 1 cut(s) 122
Hin1I GRCGYC 1 cut(s) 114
Hin1II CATG 2 cut(s) 359, 373
HincII GTYRAC 1 cut(s) 454
HindII GTYRAC 1 cut(s) 454
HindIII AAGCTT 2 cut(s) 204, 290
HinfI GANTC 5 cut(s) 107, 163, 226, 376, 392
HpaII CCGG 1 cut(s) 249
HphI GGTGA 1 cut(s) 112
Hpy166II GTNNAC 1 cut(s) 454
Hpy188I TCNGA 1 cut(s) 112
Hpy188III TCNNGA 5 cut(s) 146, 160, 223, 230, 435
Hpy8I GTNNAC 1 cut(s) 454
Hpy99I CGWCG 2 cut(s) 92, 116
HpyAV CCTTC 1 cut(s) 311
HpyCH4III ACNGT 1 cut(s) 121
HpyF10VI GCNNNNNNNGC 1 cut(s) 176
HpyF3I CTNAG 4 cut(s) 275, 280, 342, 408
Hsp92I GRCGYC 1 cut(s) 114
Hsp92II CATG 2 cut(s) 359, 373
KspI CCGCGG 1 cut(s) 267
Kzo9I GATC 4 cut(s) 84, 148, 271, 429
LguI GCTCTTC 1 cut(s) 28
LmnI GCTCC 2 cut(s) 194, 448
LpnPI CCDG 8 cut(s) 31, 87, 159, 180, 262, 316, 354, 420
MaeIII GTNAC 2 cut(s) 100, 227
MalI GATC 4 cut(s) 86, 150, 273, 431
MboI GATC 4 cut(s) 84, 148, 271, 429
MboII GAAGA 2 cut(s) 15, 385
MflI RGATCY 1 cut(s) 271
MhlI GDGCHC 1 cut(s) 445
MlsI TGGCCA 1 cut(s) 318
MluCI AATT 2 cut(s) 15, 173
MluNI TGGCCA 1 cut(s) 318
MlyI GAGTC 4 cut(s) 157, 235, 370, 386
MmeI TCCRAC 2 cut(s) 135, 216
MnlI CCTC 6 cut(s) 69, 127, 140, 165, 190, 409
Mox20I TGGCCA 1 cut(s) 318
MscI TGGCCA 1 cut(s) 318
MseI TTAA 1 cut(s) 81
Msp20I TGGCCA 1 cut(s) 318
MspA1I CMGCKG 1 cut(s) 266
MspCI CTTAAG 1 cut(s) 80
MspI CCGG 1 cut(s) 249
MspR9I CCNGG 1 cut(s) 250
MvnI CGCG 1 cut(s) 266
MwoI GCNNNNNNNGC 1 cut(s) 176
NciI CCSGG 1 cut(s) 250
NdeII GATC 4 cut(s) 84, 148, 271, 429
NlaIII CATG 2 cut(s) 359, 373
NlaIV GGNNCC 2 cut(s) 190, 444
NmuCI GTSAC 2 cut(s) 100, 227
NspV TTCGAA 1 cut(s) 201
PaeR7I CTCGAG 1 cut(s) 131
PciSI GCTCTTC 1 cut(s) 28
PfeI GAWTC 1 cut(s) 107
PleI GAGTC 4 cut(s) 157, 234, 370, 386
PpsI GAGTC 4 cut(s) 157, 234, 370, 386
PshAI GACNNNNGTC 1 cut(s) 54
PspN4I GGNNCC 2 cut(s) 190, 444
PspPI GGNCC 1 cut(s) 236
PspXI VCTCGAGB 1 cut(s) 131
PsuI RGATCY 1 cut(s) 271
RsaI GTAC 1 cut(s) 72
RsaNI GTAC 1 cut(s) 71
SacII CCGCGG 1 cut(s) 267
SapI GCTCTTC 1 cut(s) 28
SaqAI TTAA 1 cut(s) 81
Sau3AI GATC 4 cut(s) 84, 148, 271, 429
Sau96I GGNCC 1 cut(s) 236
SchI GAGTC 4 cut(s) 157, 235, 370, 386
ScrFI CCNGG 1 cut(s) 250
SduI GDGCHC 1 cut(s) 445
SetI ASST 8 cut(s) 157, 208, 281, 294, 303, 332, 350, 453
Sfr274I CTCGAG 1 cut(s) 131
Sfr303I CCGCGG 1 cut(s) 267
SfuI TTCGAA 1 cut(s) 201
SgrBI CCGCGG 1 cut(s) 267
SinI GGWCC 1 cut(s) 236
SlaI CTCGAG 1 cut(s) 131
SmlI CTYRAG 5 cut(s) 60, 80, 131, 158, 221
SmoI CTYRAG 5 cut(s) 60, 80, 131, 158, 221
Sse9I AATT 2 cut(s) 15, 173
SsiI CCGC 2 cut(s) 264, 266
StyD4I CCNGG 1 cut(s) 248
StyI CCWWGG 1 cut(s) 447
TaaI ACNGT 1 cut(s) 121
TaqI TCGA 4 cut(s) 87, 132, 201, 390
TaqII GACCGA 1 cut(s) 428
TasI AATT 2 cut(s) 15, 173
TfiI GAWTC 1 cut(s) 107
Tru1I TTAA 1 cut(s) 81
Tru9I TTAA 1 cut(s) 81
TscAI CASTG 1 cut(s) 81
TseFI GTSAC 2 cut(s) 100, 227
Tsp45I GTSAC 2 cut(s) 100, 227
TspDTI ATGAA 1 cut(s) 386
TspRI CASTG 1 cut(s) 81
Vha464I CTTAAG 1 cut(s) 80
VpaK11BI GGWCC 1 cut(s) 236
XapI RAATTY 2 cut(s) 15, 173
XhoI CTCGAG 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.