AT1G19570

Glutathione S-transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014133
Physical Location & Seq
Reverse (-)
6773302 .. 6774523
1222 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19570.1

Sequence Viewer

Length: 642 bp
ATGGCTCTGGAAATCTGTGTGAAAGCTGCTGTTGGTGCTCCTGATCATCTCGGCGACTGTCCGTTCAGCCAACGGGCTCTTCTCACACTCGAGGAGAAGAGTCTTACCTACAAAATCCATCTGATTAACCTCTCTGACAAACCCCAGTGGTTCTTGGACATTAGTCCTCAAGGGAAAGTACCAGTGCTTAAGATCGACGACAAGTGGGTGACTGATTCCGACGTCATCGTTGGTATACTCGAGGAGAAGTATCCTGATCCACCACTCAAGACTCCTGCTGAATTTGCCTCTGTTGGATCCAACATTTTTGGTACTTTTGGGACATTCTTGAAGAGCAAAGACTCCAATGACGGATCTGAACATGCCTTGCTTGTTGAGCTAGAAGCTTTGGAAAACCATCTTAAGAGTCACGATGGCCCTTTTATCGCCGGAGAAAGAGTTTCCGCAGTGGATCTAAGCTTAGCACCAAAGCTTTACCACCTTCAAGTTGCTCTTGGCCATTTCAAAAGCTGGTCTGTCCCTGAGAGCTTTCCCCATGTCCATAACTACATGAAGACTCTGTTCTCGCTCGACTCTTTTGAGAAAACTAAGACCGAGGAAAAGTATGTGATCTCTGGATGGGCTCCCAAGGTTAACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005777 GO:0005829 GO:0005886 GO:0005975 GO:0005996 GO:0006082 GO:0006464 GO:0006518 GO:0006575 GO:0006732 GO:0006749 GO:0006766 GO:0006767 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009636 GO:0009719 GO:0009725 GO:0009753 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0010193 GO:0010646 GO:0010647 GO:0010731 GO:0015036 GO:0015037 GO:0015038 GO:0016020 GO:0016209 GO:0016491 GO:0016667 GO:0016672 GO:0016740 GO:0016765 GO:0016999 GO:0017001 GO:0017144 GO:0019538 GO:0019752 GO:0019852 GO:0023051 GO:0023056 GO:0033218 GO:0033355 GO:0033554 GO:0034599 GO:0034614 GO:0034641 GO:0035690 GO:0036211 GO:0042221 GO:0042277 GO:0042493 GO:0042542 GO:0042579 GO:0042737 GO:0042743 GO:0042744 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043412 GO:0043436 GO:0043603 GO:0043900 GO:0043903 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045174 GO:0046677 GO:0046872 GO:0046914 GO:0048037 GO:0048046 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051187 GO:0051704 GO:0051707 GO:0051716 GO:0055114 GO:0065007 GO:0070301 GO:0070887 GO:0071236 GO:0071704 GO:0071944 GO:0072341 GO:0072593 GO:0080151 GO:0097237 GO:0098754 GO:0098869 GO:1900750 GO:1901564 GO:1901681 GO:1901700 GO:1901701 GO:1990748 GO:2000031 GO:2001023 GO:2001025 GO:2001038 GO:2001040
KEGG Pathways
Metabolic & Signaling
ko00053 ko00480 ko01100 map00053 map00480 map01100
Pfam Domains
Protein Families
GST_C_2 GST_N_3

Protein Analysis

213

Amino Acids

23.64

Weight (kDa)

5.56

Isoelectric Point (pI)

34.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CLIC-like_N PF22441 3 - 85 5.8e-10 CLIC-like N-terminal domain
GST_N_3 PF13417 19 - 88 3.6e-19 Glutathione S-transferase, N-terminal domain
GST_N PF02798 19 - 77 8.6e-09 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 20 - 82 7.4e-20 Glutathione S-transferase, N-terminal domain
GST_C PF00043 111 - 190 2.8e-08 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 127 - 185 2.6e-09 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19550 AT1G19570 AT1G75270
fragaria_vesca FvH4_7g19940
malus_domestica MD01G1120300.v1.1 MD07G1189500.v1.1
prunus_persica Prupe.2G227100_v2.0.a1
pyrus_communis pycom01g14680
rosa_chinensis RchiOBHm_Chr1g0365431
rosa_laevigata RLG00000027422
rosa_multiflora Rmu_sc0002587.1_g000002
rosa_roxburghii Rroxscaffold_4G00291240
rosa_rugosa Rorug01G0322100
rosa_samantha Rh1BG292300 Rh1CG308800 Rh1DG323900
rosa_wichuraiana Rw1G029330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 225
AccI GTMKAC 1 cut(s) 235
AciI CCGC 1 cut(s) 444
AclWI GGATC 5 cut(s) 251, 291, 304, 361, 459
AcoI YGGCCR 1 cut(s) 496
AcsI RAATTY 1 cut(s) 281
AcyI GRCGYC 1 cut(s) 222
AfaI GTAC 2 cut(s) 180, 313
AflII CTTAAG 2 cut(s) 188, 401
AgsI TTSAA 3 cut(s) 331, 485, 505
AjuI GAANNNNNNNTTGG 2 cut(s) 63, 95
AluBI AGCT 7 cut(s) 26, 379, 386, 459, 472, 510, 528
AluI AGCT 7 cut(s) 26, 379, 386, 459, 472, 510, 528
Alw21I GWGCWC 1 cut(s) 40
AlwI GGATC 5 cut(s) 251, 291, 304, 361, 459
Ama87I CYCGRG 2 cut(s) 89, 239
AoxI GGCC 2 cut(s) 415, 496
ApeKI GCWGC 1 cut(s) 26
ApoI RAATTY 1 cut(s) 281
AspS9I GGNCC 1 cut(s) 416
AsuHPI GGTGA 1 cut(s) 220
AvaI CYCGRG 2 cut(s) 89, 239
BalI TGGCCA 1 cut(s) 498
BamHI GGATCC 1 cut(s) 296
BanII GRGCYC 2 cut(s) 79, 625
BbsI GAAGAC 1 cut(s) 560
Bbv12I GWGCWC 1 cut(s) 40
BbvI GCAGC 1 cut(s) 13
BccI CCATC 4 cut(s) 126, 405, 407, 612
BciVI GTATCC 1 cut(s) 261
BclI TGATCA 1 cut(s) 43
BfaI CTAG 1 cut(s) 380
BfrI CTTAAG 2 cut(s) 188, 401
BfuI GTATCC 1 cut(s) 261
BisI GCNGC 1 cut(s) 27
BlpI GCTNAGC 1 cut(s) 460
BlsI GCNGC 1 cut(s) 28
BmeT110I CYCGRG 2 cut(s) 89, 239
BmgT120I GGNCC 1 cut(s) 416
BmiI GGNNCC 2 cut(s) 298, 624
BmrI ACTGGG 1 cut(s) 139
BmuI ACTGGG 1 cut(s) 139
BoxI GACNNNNGTC 1 cut(s) 162
BpiI GAAGAC 1 cut(s) 560
Bpu1102I GCTNAGC 1 cut(s) 460
BpuEI CTTGAG 2 cut(s) 153, 251
BsaHI GRCGYC 1 cut(s) 222
BsaJI CCNNGG 2 cut(s) 594, 627
BsaXI ACNNNNNCTCC 2 cut(s) 423, 453
Bse1I ACTGG 2 cut(s) 145, 182
BseDI CCNNGG 2 cut(s) 594, 627
BseGI GGATG 1 cut(s) 623
BseMII CTCAG 1 cut(s) 513
BseNI ACTGG 2 cut(s) 145, 182
BseRI GAGGAG 2 cut(s) 107, 257
BseXI GCAGC 1 cut(s) 13
BshFI GGCC 2 cut(s) 417, 498
BsiHKAI GWGCWC 1 cut(s) 40
BsiHKCI CYCGRG 2 cut(s) 89, 239
BsiSI CCGG 1 cut(s) 429
BslFI GGGAC 2 cut(s) 334, 503
BsmFI GGGAC 2 cut(s) 334, 503
BsnI GGCC 2 cut(s) 417, 498
BsoBI CYCGRG 2 cut(s) 89, 239
Bsp1286I GDGCHC 3 cut(s) 40, 79, 625
Bsp143I GATC 7 cut(s) 43, 192, 256, 296, 353, 451, 609
Bsp1720I GCTNAGC 1 cut(s) 460
BspACI CCGC 1 cut(s) 444
BspANI GGCC 2 cut(s) 417, 498
BspCNI CTCAG 1 cut(s) 514
BspLI GGNNCC 2 cut(s) 298, 624
BspPI GGATC 5 cut(s) 251, 291, 304, 361, 459
BspQI GCTCTTC 2 cut(s) 84, 326
BspTI CTTAAG 2 cut(s) 188, 401
BsrI ACTGG 2 cut(s) 145, 182
BssECI CCNNGG 2 cut(s) 594, 627
BssMI GATC 7 cut(s) 43, 192, 256, 296, 353, 451, 609
BssNAI GTATAC 1 cut(s) 236
BssNI GRCGYC 1 cut(s) 222
BssT1I CCWWGG 1 cut(s) 627
Bst1107I GTATAC 1 cut(s) 236
Bst4CI ACNGT 1 cut(s) 59
Bst6I CTCTTC 3 cut(s) 84, 92, 326
BstACI GRCGYC 1 cut(s) 222
BstAFI CTTAAG 2 cut(s) 188, 401
BstDEI CTNAG 4 cut(s) 455, 460, 522, 588
BstF5I GGATG 1 cut(s) 623
BstKTI GATC 7 cut(s) 46, 195, 259, 299, 356, 454, 612
BstMBI GATC 7 cut(s) 43, 192, 256, 296, 353, 451, 609
BstMWI GCNNNNNNNGC 3 cut(s) 35, 284, 376
BstNSI RCATGY 1 cut(s) 365
BstPAI GACNNNNGTC 1 cut(s) 162
BstV1I GCAGC 1 cut(s) 13
BstV2I GAAGAC 1 cut(s) 560
BstX2I RGATCY 3 cut(s) 296, 353, 451
BstYI RGATCY 3 cut(s) 296, 353, 451
BstZ17I GTATAC 1 cut(s) 236
BsuI GTATCC 1 cut(s) 261
BsuRI GGCC 2 cut(s) 417, 498
BtsCI GGATG 1 cut(s) 623
BtsI GCAGTG 1 cut(s) 453
BtsIMutI CAGTG 3 cut(s) 152, 189, 453
Cfr13I GGNCC 1 cut(s) 416
Csp6I GTAC 2 cut(s) 179, 312
CviAII CATG 3 cut(s) 362, 536, 550
CviQI GTAC 2 cut(s) 179, 312
DdeI CTNAG 4 cut(s) 455, 460, 522, 588
DpnI GATC 7 cut(s) 45, 194, 258, 298, 355, 453, 611
DpnII GATC 7 cut(s) 43, 192, 256, 296, 353, 451, 609
EaeI YGGCCR 1 cut(s) 496
Eam1104I CTCTTC 3 cut(s) 84, 92, 326
EarI CTCTTC 3 cut(s) 84, 92, 326
Eco130I CCWWGG 1 cut(s) 627
Eco24I GRGCYC 2 cut(s) 79, 625
Eco88I CYCGRG 2 cut(s) 89, 239
EcoT14I CCWWGG 1 cut(s) 627
EcoT38I GRGCYC 2 cut(s) 79, 625
ErhI CCWWGG 1 cut(s) 627
FaeI CATG 3 cut(s) 365, 539, 553
FaiI YATR 6 cut(s) 236, 363, 537, 543, 551, 606
FalI AAGNNNNNCTT 2 cut(s) 477, 509
FaqI GGGAC 2 cut(s) 334, 503
FatI CATG 3 cut(s) 361, 535, 549
FbaI TGATCA 1 cut(s) 43
FblI GTMKAC 1 cut(s) 235
Fnu4HI GCNGC 1 cut(s) 27
FokI GGATG 1 cut(s) 630
FriOI GRGCYC 2 cut(s) 79, 625
Fsp4HI GCNGC 1 cut(s) 27
FspBI CTAG 1 cut(s) 380
GluI GCNGC 1 cut(s) 27
HaeIII GGCC 2 cut(s) 417, 498
HapII CCGG 1 cut(s) 429
Hin1I GRCGYC 1 cut(s) 222
Hin1II CATG 3 cut(s) 365, 539, 553
HincII GTYRAC 1 cut(s) 634
HindII GTYRAC 1 cut(s) 634
HindIII AAGCTT 3 cut(s) 384, 457, 470
HinfI GANTC 7 cut(s) 100, 215, 271, 341, 406, 556, 572
HpaI GTTAAC 1 cut(s) 634
HpaII CCGG 1 cut(s) 429
HphI GGTGA 1 cut(s) 220
Hpy166II GTNNAC 2 cut(s) 236, 634
Hpy188I TCNGA 4 cut(s) 123, 136, 220, 358
Hpy188III TCNNGA 7 cut(s) 8, 41, 254, 268, 328, 410, 615
Hpy8I GTNNAC 2 cut(s) 236, 634
Hpy99I CGWCG 2 cut(s) 200, 224
HpyAV CCTTC 1 cut(s) 491
HpyCH4III ACNGT 1 cut(s) 59
HpyCH4IV ACGT 1 cut(s) 222
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 284, 376
HpyF3I CTNAG 4 cut(s) 455, 460, 522, 588
HpySE526I ACGT 1 cut(s) 222
Hsp92I GRCGYC 1 cut(s) 222
Hsp92II CATG 3 cut(s) 365, 539, 553
Ksp22I TGATCA 1 cut(s) 43
KspAI GTTAAC 1 cut(s) 634
Kzo9I GATC 7 cut(s) 43, 192, 256, 296, 353, 451, 609
LguI GCTCTTC 2 cut(s) 84, 326
LmnI GCTCC 2 cut(s) 43, 628
LpnPI CCDG 9 cut(s) 54, 158, 195, 267, 288, 442, 496, 534, 600
Lsp1109I GCAGC 1 cut(s) 13
MaeI CTAG 1 cut(s) 380
MaeII ACGT 1 cut(s) 222
MaeIII GTNAC 2 cut(s) 208, 407
MalI GATC 7 cut(s) 45, 194, 258, 298, 355, 453, 611
MboI GATC 7 cut(s) 43, 192, 256, 296, 353, 451, 609
MboII GAAGA 4 cut(s) 71, 109, 343, 565
MflI RGATCY 3 cut(s) 296, 353, 451
MhlI GDGCHC 3 cut(s) 40, 79, 625
MlsI TGGCCA 1 cut(s) 498
MluCI AATT 1 cut(s) 281
MluNI TGGCCA 1 cut(s) 498
MlyI GAGTC 6 cut(s) 109, 265, 335, 415, 550, 566
MmeI TCCRAC 3 cut(s) 243, 274, 324
MnlI CCTC 6 cut(s) 85, 140, 177, 235, 298, 589
Mox20I TGGCCA 1 cut(s) 498
MscI TGGCCA 1 cut(s) 498
MseI TTAA 4 cut(s) 126, 189, 402, 633
Msp20I TGGCCA 1 cut(s) 498
MspCI CTTAAG 2 cut(s) 188, 401
MspI CCGG 1 cut(s) 429
MwoI GCNNNNNNNGC 3 cut(s) 35, 284, 376
NdeII GATC 7 cut(s) 43, 192, 256, 296, 353, 451, 609
NlaIII CATG 3 cut(s) 365, 539, 553
NlaIV GGNNCC 2 cut(s) 298, 624
NmeAIII GCCGAG 1 cut(s) 30
NmuCI GTSAC 2 cut(s) 208, 407
NspI RCATGY 1 cut(s) 365
PaeR7I CTCGAG 2 cut(s) 89, 239
PciSI GCTCTTC 2 cut(s) 84, 326
PfeI GAWTC 1 cut(s) 215
PkrI GCNGC 1 cut(s) 28
PleI GAGTC 6 cut(s) 108, 265, 335, 414, 550, 566
PpsI GAGTC 6 cut(s) 108, 265, 335, 414, 550, 566
PshAI GACNNNNGTC 1 cut(s) 162
PspN4I GGNNCC 2 cut(s) 298, 624
PspPI GGNCC 1 cut(s) 416
PspXI VCTCGAGB 2 cut(s) 89, 239
PsuI RGATCY 3 cut(s) 296, 353, 451
RsaI GTAC 2 cut(s) 180, 313
RsaNI GTAC 2 cut(s) 179, 312
SapI GCTCTTC 2 cut(s) 84, 326
SaqAI TTAA 4 cut(s) 126, 189, 402, 633
SatI GCNGC 1 cut(s) 27
Sau3AI GATC 7 cut(s) 43, 192, 256, 296, 353, 451, 609
Sau96I GGNCC 1 cut(s) 416
SchI GAGTC 6 cut(s) 109, 265, 335, 415, 550, 566
SduI GDGCHC 3 cut(s) 40, 79, 625
Sfr274I CTCGAG 2 cut(s) 89, 239
SlaI CTCGAG 2 cut(s) 89, 239
SmlI CTYRAG 6 cut(s) 89, 168, 188, 239, 266, 401
SmoI CTYRAG 6 cut(s) 89, 168, 188, 239, 266, 401
Sse9I AATT 1 cut(s) 281
SsiI CCGC 1 cut(s) 444
SspMI CTAG 1 cut(s) 380
StyI CCWWGG 1 cut(s) 627
TaaI ACNGT 1 cut(s) 59
TaiI ACGT 1 cut(s) 225
TaqI TCGA 4 cut(s) 90, 195, 240, 570
TaqII GACCGA 1 cut(s) 608
TasI AATT 1 cut(s) 281
TfiI GAWTC 1 cut(s) 215
Tru1I TTAA 4 cut(s) 126, 189, 402, 633
Tru9I TTAA 4 cut(s) 126, 189, 402, 633
TscAI CASTG 3 cut(s) 152, 189, 453
TseFI GTSAC 2 cut(s) 208, 407
TseI GCWGC 1 cut(s) 26
Tsp45I GTSAC 2 cut(s) 208, 407
TspDTI ATGAA 1 cut(s) 566
TspGWI ACGGA 2 cut(s) 51, 366
TspRI CASTG 3 cut(s) 152, 189, 453
Vha464I CTTAAG 2 cut(s) 188, 401
XapI RAATTY 1 cut(s) 281
XceI RCATGY 1 cut(s) 365
XhoI CTCGAG 2 cut(s) 89, 239
XmiI GTMKAC 1 cut(s) 235
XspI CTAG 1 cut(s) 380
ZraI GACGTC 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.