AT1G19630

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011224
Physical Location & Seq
Reverse (-)
6783803 .. 6788175
4373 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19630.1

Sequence Viewer

Length: 1431 bp
ATGGAACATCTTTGCCTCTGTCTTGTCCTCTGCGCTGCGATGCTAACACTTGGAAAATTTCTCAAAATTATGTTCCAAGATCGAAAGAAATCAACAGCTGGTGTTCCTCCGGGAAGCGATGGTTTTCCGGTGATCGGAGAAACACTTCAGTTTATGCTTTCTGTCAACAGCGGCAAAGGCTTCTACGAATTCGTCCGTAGTCGCCGTATCAGGTACGGTAGTTGCTTTAGGACAAGTTTGTTCGGAGAGACACACGTGTTCCTGTCTACGACCGAGTCAGCTCGGCTTGTTCTGAACAACGACTCAGGGATGTTCACGAAACGGTACATAAAGTCCATAGGTGAGCTTGTAGGTGATCGGAGCCTTCTATGTGCTCCTCAACACCATCACAAGATTCTCCGTAGCCGTTTGATCAACTTGTTCTCCAAAAGATCGACGGCTCTGATGGTTAGACACTTTGATGAACTCGTCGTGGACGCTCTTGGTGGATGGGAACACCGTGGTACGGTGGTCTTGCTCACAGATTTGCTCCAGATAACATTCAAAGCAATGTGTAAGATGTTAGTAAGTCTAGAAAAGGAAGAAGAACTGGGTTCCATGCAAAGAGATGTGGGCTTTGTTTGTGAAGCCATGCTCGCTTTTCCTCTCAATTTACCTTGGACTAGATTCCACAAGGGGATCATGGCAAGAGGAAGAGTTATGGAGATGTTAGAAAAGATAATTAGAGAACGGAGAAATGAAATAAATAGTCATAATAATCATCATGAAGATTTTCTGCAGCAGCTTCTTGCAGTAGATAACGACACTCCTCAGTTGACTGATGCTGAGATTAAGGACAATATTCTGACCATGATCATTGCAGGACAGGACACGACTGCTAGTGCTCTGACATGGATGGTCAAGTACCTCGGAGAAAATCAGAAGGTTTTGGATATTCTTATTGAAGAACAATCTCAGATTACAAAGAAGGCATCAAATAAACCATTTCTTGAACTAGAAGATCTAAGTGAAATGCCATATGCCTCAAAGATGGTGAAAGAATCTCTGAGAATGGCGTCTGTTGTGCCTTGGTTCCCAAGATTAGTCCTTCAAGACTGTGAAATGGAAGGATATAAGATCAAAAAAGGGTGGAATATAAATATTGACGCAAGATCCATTCATCTTGATCCTACTGTATACAGTGAACCTCACAAGTTCAACCCTTTAAGGTTTGAGGAGGAAGCAAAAGCAAACAGTTTTCTAGCATTTGGGATGGGAGGAAGAACATGTCTTGGACTTGCTTTGGCCAAAGCCATGATGTTAGTGTTTCTCCACCGTTTTATAACAACTTACAGATGGGAAGTAGTAGATGAAGATCCAAGCATTGAAAAGTGGACATTGTTTGCAAGATTGAAGAGTGGATATCCAATTCGCGTGTCACGTAGATTGTAA

Protein Analysis

476

Amino Acids

54.53

Weight (kDa)

8.72

Isoelectric Point (pI)

49.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 467 2.8e-73 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011224)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19630 AT1G19630 AT1G19630
fragaria_vesca FvH4_2g39460 FvH4_2g39460 FvH4_2g39460 FvH4_2g39460 FvH4_2g39460
malus_domestica MD08G1027400.v1.1
prunus_persica Prupe.1G375900_v2.0.a1
pyrus_communis pycom08g02130
rosa_chinensis RchiOBHm_Chr6g0301491
rosa_laevigata RLG00000011249
rosa_multiflora Rmu_sc0014417.1_g000022
rosa_roxburghii Rroxscaffold_7G00166710
rosa_rugosa Rorug06G0305400
rosa_samantha Rh6AG419300 Rh6CG432400 Rh6DG418300
rosa_wichuraiana Rw6G036250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1322
AccI GTMKAC 2 cut(s) 266, 1176
AccII CGCG 1 cut(s) 1413
AciI CCGC 1 cut(s) 171
AclWI GGATC 4 cut(s) 686, 1146, 1160, 1349
AcoI YGGCCR 1 cut(s) 1284
AcsI RAATTY 2 cut(s) 56, 188
AcuI CTGAAG 1 cut(s) 131
AcvI CACGTG 1 cut(s) 256
AcyI GRCGYC 1 cut(s) 1055
AfaI GTAC 4 cut(s) 215, 326, 505, 905
AfiI CCNNNNNNNGG 2 cut(s) 134, 505
AflIII ACRYGT 3 cut(s) 253, 255, 1265
AgsI TTSAA 7 cut(s) 544, 944, 992, 1091, 1198, 1367, 1393
AluBI AGCT 4 cut(s) 98, 281, 346, 784
AluI AGCT 4 cut(s) 98, 281, 346, 784
Alw21I GWGCWC 2 cut(s) 376, 886
Alw26I GTCTC 1 cut(s) 242
AlwI GGATC 4 cut(s) 686, 1146, 1160, 1349
AoxI GGCC 1 cut(s) 1284
ApeKI GCWGC 3 cut(s) 35, 778, 781
ApoI RAATTY 2 cut(s) 56, 188
Asp700I GAANNNNTTC 2 cut(s) 144, 771
AspLEI GCGC 1 cut(s) 35
AsuC2I CCSGG 1 cut(s) 111
AsuHPI GGTGA 4 cut(s) 142, 353, 365, 1045
BaeI ACNNNNGTAYC 4 cut(s) 205, 238, 495, 528
BalI TGGCCA 1 cut(s) 1286
BbrPI CACGTG 1 cut(s) 256
Bbv12I GWGCWC 2 cut(s) 376, 886
BbvI GCAGC 3 cut(s) 22, 790, 793
BccI CCATC 8 cut(s) 113, 393, 439, 483, 889, 1024, 1246, 1329
BceAI ACGGC 3 cut(s) 189, 390, 453
BclI TGATCA 2 cut(s) 411, 852
BcnI CCSGG 1 cut(s) 111
BcoDI GTCTC 1 cut(s) 242
BfaI CTAG 5 cut(s) 572, 663, 879, 995, 1241
BfmI CTRYAG 1 cut(s) 776
BglII AGATCT 1 cut(s) 1000
BisI GCNGC 4 cut(s) 36, 172, 779, 782
BlsI GCNGC 4 cut(s) 37, 173, 780, 783
Bme1390I CCNGG 1 cut(s) 111
BmiI GGNNCC 3 cut(s) 362, 595, 1073
BmrFI CCNGG 1 cut(s) 111
BmrI ACTGGG 1 cut(s) 599
BmsI GCATC 3 cut(s) 30, 811, 980
BmuI ACTGGG 1 cut(s) 599
BpmI CTGGAG 1 cut(s) 515
BpuMI CCSGG 1 cut(s) 111
BsaAI YACGTR 2 cut(s) 256, 1421
BsaBI GATNNNNATC 1 cut(s) 1353
BsaHI GRCGYC 1 cut(s) 1055
BsaJI CCNNGG 4 cut(s) 499, 656, 907, 1067
BsaWI WCCGGW 1 cut(s) 127
BsaXI ACNNNNNCTCC 2 cut(s) 407, 437
Bsc4I CCNNNNNNNGG 2 cut(s) 134, 505
Bse1I ACTGG 1 cut(s) 594
Bse3DI GCAATG 2 cut(s) 555, 855
Bse8I GATNNNNATC 1 cut(s) 1353
BseDI CCNNGG 4 cut(s) 499, 656, 907, 1067
BseGI GGATG 4 cut(s) 315, 494, 900, 1257
BseJI GATNNNNATC 1 cut(s) 1353
BseLI CCNNNNNNNGG 2 cut(s) 134, 505
BseMI GCAATG 2 cut(s) 555, 855
BseMII CTCAG 5 cut(s) 318, 816, 824, 968, 1037
BseNI ACTGG 1 cut(s) 594
BseRI GAGGAG 3 cut(s) 366, 798, 1229
BseXI GCAGC 3 cut(s) 22, 790, 793
Bsh1236I CGCG 1 cut(s) 1413
Bsh1285I CGRYCG 1 cut(s) 273
BshFI GGCC 1 cut(s) 1286
BsiEI CGRYCG 1 cut(s) 273
BsiHKAI GWGCWC 2 cut(s) 376, 886
BsiSI CCGG 2 cut(s) 110, 128
BslI CCNNNNNNNGG 2 cut(s) 134, 505
BsmAI GTCTC 1 cut(s) 242
BsnI GGCC 1 cut(s) 1286
Bsp1286I GDGCHC 2 cut(s) 376, 886
BspACI CCGC 1 cut(s) 171
BspANI GGCC 1 cut(s) 1286
BspCNI CTCAG 5 cut(s) 317, 817, 823, 967, 1038
BspFNI CGCG 1 cut(s) 1413
BspHI TCATGA 1 cut(s) 763
BspLI GGNNCC 3 cut(s) 362, 595, 1073
BspMAI CTGCAG 1 cut(s) 780
BspPI GGATC 4 cut(s) 686, 1146, 1160, 1349
BsrDI GCAATG 2 cut(s) 555, 855
BsrI ACTGG 1 cut(s) 594
BssECI CCNNGG 4 cut(s) 499, 656, 907, 1067
BssNAI GTATAC 1 cut(s) 1177
BssNI GRCGYC 1 cut(s) 1055
BssT1I CCWWGG 2 cut(s) 656, 1067
Bst1107I GTATAC 1 cut(s) 1177
Bst4CI ACNGT 9 cut(s) 218, 324, 500, 508, 1097, 1174, 1181, 1235, 1316
Bst6I CTCTTC 2 cut(s) 688, 1388
BstACI GRCGYC 1 cut(s) 1055
BstBAI YACGTR 2 cut(s) 256, 1421
BstC8I GCNNGC 1 cut(s) 636
BstDEI CTNAG 6 cut(s) 304, 810, 825, 954, 1004, 1046
BstDSI CCRYGG 1 cut(s) 499
BstF5I GGATG 4 cut(s) 315, 494, 900, 1257
BstFNI CGCG 1 cut(s) 1413
BstHHI GCGC 1 cut(s) 35
BstMAI GTCTC 1 cut(s) 242
BstMCI CGRYCG 1 cut(s) 273
BstMWI GCNNNNNNNGC 2 cut(s) 177, 635
BstNSI RCATGY 1 cut(s) 1269
BstSCI CCNGG 1 cut(s) 109
BstSFI CTRYAG 1 cut(s) 776
BstUI CGCG 1 cut(s) 1413
BstV1I GCAGC 3 cut(s) 22, 790, 793
BstX2I RGATCY 3 cut(s) 1000, 1151, 1354
BstYI RGATCY 3 cut(s) 1000, 1151, 1354
BstZ17I GTATAC 1 cut(s) 1177
BsuRI GGCC 1 cut(s) 1286
BtgI CCRYGG 1 cut(s) 499
BtgZI GCGATG 2 cut(s) 53, 132
BtsCI GGATG 4 cut(s) 315, 494, 900, 1257
BtsIMutI CAGTG 1 cut(s) 1186
Cac8I GCNNGC 1 cut(s) 636
CciI TCATGA 1 cut(s) 763
CfoI GCGC 1 cut(s) 35
CseI GACGC 3 cut(s) 485, 1044, 1154
Csp6I GTAC 4 cut(s) 214, 325, 504, 904
CviAII CATG 8 cut(s) 598, 631, 682, 764, 850, 891, 1266, 1294
CviQI GTAC 4 cut(s) 214, 325, 504, 904
DdeI CTNAG 6 cut(s) 304, 810, 825, 954, 1004, 1046
EaeI YGGCCR 1 cut(s) 1284
Eam1104I CTCTTC 2 cut(s) 688, 1388
EarI CTCTTC 2 cut(s) 688, 1388
Eco130I CCWWGG 2 cut(s) 656, 1067
Eco32I GATATC 1 cut(s) 1403
Eco57I CTGAAG 1 cut(s) 131
Eco72I CACGTG 1 cut(s) 256
EcoRI GAATTC 1 cut(s) 188
EcoRV GATATC 1 cut(s) 1403
EcoT14I CCWWGG 2 cut(s) 656, 1067
ErhI CCWWGG 2 cut(s) 656, 1067
FaeI CATG 8 cut(s) 601, 634, 685, 767, 853, 894, 1269, 1297
FatI CATG 8 cut(s) 597, 630, 681, 763, 849, 890, 1265, 1293
FauNDI CATATG 1 cut(s) 1018
FbaI TGATCA 2 cut(s) 411, 852
FblI GTMKAC 2 cut(s) 266, 1176
Fnu4HI GCNGC 4 cut(s) 36, 172, 779, 782
FokI GGATG 4 cut(s) 322, 501, 907, 1264
Fsp4HI GCNGC 4 cut(s) 36, 172, 779, 782
FspBI CTAG 5 cut(s) 572, 663, 879, 995, 1241
GlaI GCGC 1 cut(s) 34
GluI GCNGC 4 cut(s) 36, 172, 779, 782
GsuI CTGGAG 1 cut(s) 515
HaeIII GGCC 1 cut(s) 1286
HapII CCGG 2 cut(s) 110, 128
HgaI GACGC 3 cut(s) 485, 1044, 1154
HhaI GCGC 1 cut(s) 35
Hin1I GRCGYC 1 cut(s) 1055
Hin1II CATG 8 cut(s) 601, 634, 685, 767, 853, 894, 1269, 1297
Hin6I GCGC 1 cut(s) 33
HinP1I GCGC 1 cut(s) 33
HincII GTYRAC 2 cut(s) 166, 816
HindII GTYRAC 2 cut(s) 166, 816
HinfI GANTC 5 cut(s) 275, 302, 394, 666, 1040
HpaII CCGG 2 cut(s) 110, 128
HphI GGTGA 4 cut(s) 142, 353, 365, 1045
Hpy166II GTNNAC 8 cut(s) 166, 267, 315, 475, 816, 1177, 1184, 1374
Hpy188III TCNNGA 7 cut(s) 316, 532, 572, 764, 989, 1091, 1163
Hpy8I GTNNAC 8 cut(s) 166, 267, 315, 475, 816, 1177, 1184, 1374
Hpy99I CGWCG 2 cut(s) 439, 473
HpyAV CCTTC 5 cut(s) 374, 916, 961, 1097, 1100
HpyCH4III ACNGT 9 cut(s) 218, 324, 500, 508, 1097, 1174, 1181, 1235, 1316
HpyCH4IV ACGT 2 cut(s) 255, 1420
HpyCH4V TGCA 5 cut(s) 601, 778, 791, 860, 1385
HpyF10VI GCNNNNNNNGC 2 cut(s) 177, 635
HpyF3I CTNAG 6 cut(s) 304, 810, 825, 954, 1004, 1046
HpySE526I ACGT 2 cut(s) 255, 1420
Hsp92I GRCGYC 1 cut(s) 1055
Hsp92II CATG 8 cut(s) 601, 634, 685, 767, 853, 894, 1269, 1297
HspAI GCGC 1 cut(s) 33
Ksp22I TGATCA 2 cut(s) 411, 852
LmnI GCTCC 3 cut(s) 360, 379, 534
Lsp1109I GCAGC 3 cut(s) 22, 790, 793
LweI GCATC 3 cut(s) 30, 811, 980
MaeI CTAG 5 cut(s) 572, 663, 879, 995, 1241
MaeII ACGT 2 cut(s) 255, 1420
MaeIII GTNAC 1 cut(s) 1416
MboII GAAGA 9 cut(s) 593, 596, 705, 779, 956, 1010, 1272, 1364, 1405
MflI RGATCY 3 cut(s) 1000, 1151, 1354
MhlI GDGCHC 2 cut(s) 376, 886
MlsI TGGCCA 1 cut(s) 1286
MluCI AATT 6 cut(s) 56, 66, 188, 649, 720, 1407
MluNI TGGCCA 1 cut(s) 1286
MlyI GAGTC 2 cut(s) 284, 296
Mox20I TGGCCA 1 cut(s) 1286
MroXI GAANNNNTTC 2 cut(s) 144, 771
MscI TGGCCA 1 cut(s) 1286
MseI TTAA 2 cut(s) 831, 1205
MslI CAYNNNNRTG 1 cut(s) 459
Msp20I TGGCCA 1 cut(s) 1286
MspA1I CMGCKG 2 cut(s) 98, 171
MspI CCGG 2 cut(s) 110, 128
MspR9I CCNGG 1 cut(s) 111
MvnI CGCG 1 cut(s) 1413
MwoI GCNNNNNNNGC 2 cut(s) 177, 635
NciI CCSGG 1 cut(s) 111
NdeI CATATG 1 cut(s) 1018
NlaIII CATG 8 cut(s) 601, 634, 685, 767, 853, 894, 1269, 1297
NlaIV GGNNCC 3 cut(s) 362, 595, 1073
NmeAIII GCCGAG 1 cut(s) 262
NmuCI GTSAC 1 cut(s) 1416
NspI RCATGY 1 cut(s) 1269
PagI TCATGA 1 cut(s) 763
PciI ACATGT 1 cut(s) 1265
PcsI WCGNNNNNNNCGW 1 cut(s) 1417
PdmI GAANNNNTTC 2 cut(s) 144, 771
PfeI GAWTC 3 cut(s) 394, 666, 1040
PflFI GACNNNGTC 1 cut(s) 274
PfoI TCCNGGA 1 cut(s) 109
PkrI GCNGC 4 cut(s) 37, 173, 780, 783
PleI GAGTC 2 cut(s) 283, 296
PmaCI CACGTG 1 cut(s) 256
PmlI CACGTG 1 cut(s) 256
PpsI GAGTC 2 cut(s) 283, 296
Ppu21I YACGTR 2 cut(s) 256, 1421
PscI ACATGT 1 cut(s) 1265
PsiI TTATAA 1 cut(s) 1322
PspCI CACGTG 1 cut(s) 256
PspN4I GGNNCC 3 cut(s) 362, 595, 1073
PstI CTGCAG 1 cut(s) 780
PsuI RGATCY 3 cut(s) 1000, 1151, 1354
PsyI GACNNNGTC 1 cut(s) 274
PvuII CAGCTG 1 cut(s) 98
RsaI GTAC 4 cut(s) 215, 326, 505, 905
RsaNI GTAC 4 cut(s) 214, 325, 504, 904
RseI CAYNNNNRTG 1 cut(s) 459
SaqAI TTAA 2 cut(s) 831, 1205
SatI GCNGC 4 cut(s) 36, 172, 779, 782
SchI GAGTC 2 cut(s) 284, 296
ScrFI CCNGG 1 cut(s) 111
SduI GDGCHC 2 cut(s) 376, 886
SfaNI GCATC 3 cut(s) 30, 811, 980
SfcI CTRYAG 1 cut(s) 776
SmiMI CAYNNNNRTG 1 cut(s) 459
Sse9I AATT 6 cut(s) 56, 66, 188, 649, 720, 1407
SsiI CCGC 1 cut(s) 171
SspI AATATT 2 cut(s) 841, 1141
SspMI CTAG 5 cut(s) 572, 663, 879, 995, 1241
StyD4I CCNGG 1 cut(s) 109
StyI CCWWGG 2 cut(s) 656, 1067
TaaI ACNGT 9 cut(s) 218, 324, 500, 508, 1097, 1174, 1181, 1235, 1316
TaiI ACGT 2 cut(s) 258, 1423
TaqI TCGA 2 cut(s) 82, 434
TaqII GACCGA 1 cut(s) 287
TasI AATT 6 cut(s) 56, 66, 188, 649, 720, 1407
TauI GCSGC 1 cut(s) 174
TfiI GAWTC 3 cut(s) 394, 666, 1040
Tru1I TTAA 2 cut(s) 831, 1205
Tru9I TTAA 2 cut(s) 831, 1205
TscAI CASTG 1 cut(s) 1186
TseFI GTSAC 1 cut(s) 1416
TseI GCWGC 3 cut(s) 35, 778, 781
Tsp45I GTSAC 1 cut(s) 1416
TspDTI ATGAA 5 cut(s) 477, 753, 780, 1148, 1365
TspGWI ACGGA 3 cut(s) 185, 389, 745
TspRI CASTG 1 cut(s) 1186
Tth111I GACNNNGTC 1 cut(s) 274
XapI RAATTY 2 cut(s) 56, 188
XbaI TCTAGA 1 cut(s) 571
XceI RCATGY 1 cut(s) 1269
XmiI GTMKAC 2 cut(s) 266, 1176
XmnI GAANNNNTTC 2 cut(s) 144, 771
XspI CTAG 5 cut(s) 572, 663, 879, 995, 1241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.