MD08G1027400.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
1992632 .. 2000319
7688 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1027400.v1.1.491

Sequence Viewer

Length: 1515 bp
ATGCCTTCCCGTTTGCCACAAGAAGCTTATTATTCTTTTGGTTGTTACGACGTGGTAATAGTATTAGGTGCCTTGTCATGTCTGCTTTATCAAATTATCAAGTCAGGGAACTGCTCAAATCACGATATATCAACGGCTGAAATTCCTCCAGGCAGCCGAGGATTACCATTCATTGGAGAAACCCTAAAGTTCATGGCTTCCATTAACAGTGGCAAAGGGTTTTACGAGTTTGTCCGTCTTCGCCGTCTCCGGCATGGAAATTGCTTTAGGACCAACATATTCGGAGAGACGCATGTTTTCGTTTCGAGCACGGACTCAGCAAAGGCAGTCTTAAACAATGACTTGGGGAGATTCAGCAAGAGATACATGAAAACTATTGCTGCGCTAGTGGGAAATCAAAGCCTCCTCTGTGCTTCCCACCAACACCACAAACTAATTCGTGGGCAACTAAGCAACTTGTTTTCTACCAATTCTTTATCAGTTTTTATCAAACAGTTTGATGAACTCATTGTTGATGCTATGAGAGGGTGGGAGCATAGAAGCTGTGTGGTCATACAAGACGAAGCAGTCAAGATAACCTGCAAAGCTATGTGCAAGATGTTGATAAGCGTGGAAAGCGGATACGAACTAGAGGTGTTGCAAAAGGAGGTGGCTCATGTTTGTGAAGCAATGTTAGCATTCCCGTTGAGGCTACCTAGGACTAGGTTTTACAAAGGACTTCAGGCTAGAAAGAAAATCATGGGAATAATTGGGGATGCAATGAGTGAAAGGAGAAAAGGGTTAGAAGTTAAGAGTGAAGATCTTTTACAGCGGCTTTTGACAGAGGATGAAAAAGCATGTGGTGAAACAGGCACTACTGCCCGGCAGCTAACAGATGAAGAGATAAAAGACAATATATTAACCATGATCATTGCAGGTCAGGATACAACAGCCAGTGCAATGACATGGATGATCAAATTCTTAGACGAGAACCCAGAAGTGCTTCCCACTCTTATGAAAGAACAACTTGACTTGGCGAGAAAAACTTCTTCAAAGTCATTTCTAACACTGGAGAGCATTAACGACATGCCGTATGCTGCTAAGGTGGCAAAAGAATCCCTAAGGTTGGCTTCTGTCGTGCCATGGTTTCCAAGACTAGCTCTCGAGGACTGCGAGATGGAAGGATTTAAGATCAAGAGAGGGTGGAATGTGAACGTTGATGCTAAATCAGTACACCTTGATCCTACGGTCTACACTGATCCCAACAAGTTCAATCCGTCTAGGTTTGACGATGAGTCAAAAGTACCATACAGCTTCTTAGCTTTTGGGATGGGAGGGAGGACATGCCTGGGGATGAACATGGCCAAGGCCATGATGCTGGTCTTTCTCCACCGCCTCACCACTACTTACAGGTGGAAGGTGATTGACGCAGACTCCAGTATTGAAAAATGGGGGCTCTTCTCAAAATTAAAAAGTGGTTGTCCGGTAACCGTGACCTGTATCGCTGAGAATTATACCCCCAGATATCAGCAATAA

Protein Analysis

505

Amino Acids

56.82

Weight (kDa)

8.7

Isoelectric Point (pI)

40.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 49 - 471 1.2e-69 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011224)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 566
Acc36I ACCTGC 2 cut(s) 587, 905
AccB1I GGYRCC 1 cut(s) 68
AccB7I CCANNNNNTGG 1 cut(s) 173
AccI GTMKAC 1 cut(s) 1230
AciI CCGC 3 cut(s) 618, 811, 1372
AclI AACGTT 1 cut(s) 1194
AclWI GGATC 2 cut(s) 1214, 1232
AcoI YGGCCR 1 cut(s) 1341
AcsI RAATTY 2 cut(s) 141, 956
AcuI CTGAAG 1 cut(s) 704
AfaI GTAC 2 cut(s) 1212, 1284
AfiI CCNNNNNNNGG 2 cut(s) 173, 1105
AgsI TTSAA 3 cut(s) 1032, 1252, 1424
AhdI GACNNNNNGTC 1 cut(s) 1273
AjiI CACGTC 1 cut(s) 52
AjnI CCWGG 2 cut(s) 148, 1326
AluBI AGCT 7 cut(s) 26, 543, 587, 868, 1139, 1293, 1301
AluI AGCT 7 cut(s) 26, 543, 587, 868, 1139, 1293, 1301
Alw21I GWGCWC 1 cut(s) 311
Alw26I GTCTC 2 cut(s) 251, 281
AlwI GGATC 2 cut(s) 1214, 1232
Ama87I CYCGRG 1 cut(s) 1142
AoxI GGCC 2 cut(s) 1341, 1347
ApeKI GCWGC 4 cut(s) 153, 380, 865, 1076
ApoI RAATTY 2 cut(s) 141, 956
Asp700I GAANNNNTTC 2 cut(s) 981, 1024
AspA2I CCTAGG 1 cut(s) 695
AspLEI GCGC 1 cut(s) 385
AspS9I GGNCC 1 cut(s) 270
AsuC2I CCSGG 1 cut(s) 862
AsuHPI GGTGA 3 cut(s) 854, 1369, 1411
AvaI CYCGRG 1 cut(s) 1142
AvaII GGWCC 1 cut(s) 270
AvrII CCTAGG 1 cut(s) 695
AxyI CCTNAGG 1 cut(s) 1100
BalI TGGCCA 1 cut(s) 1343
BanI GGYRCC 1 cut(s) 68
BanII GRGCYC 1 cut(s) 1437
BarI GAAGNNNNNNTAC 2 cut(s) 789, 821
BbsI GAAGAC 1 cut(s) 230
Bbv12I GWGCWC 1 cut(s) 311
BbvI GCAGC 4 cut(s) 165, 367, 877, 1063
BccI CCATC 2 cut(s) 1150, 1303
BceAI ACGGC 3 cut(s) 150, 228, 1054
BciT130I CCWGG 2 cut(s) 150, 1328
BciVI GTATCC 2 cut(s) 614, 916
BclI TGATCA 2 cut(s) 906, 951
BcnI CCSGG 1 cut(s) 862
BcoDI GTCTC 2 cut(s) 251, 281
BfaI CTAG 7 cut(s) 386, 629, 696, 702, 726, 1136, 1260
BfuAI ACCTGC 2 cut(s) 587, 905
BfuI GTATCC 2 cut(s) 614, 916
BglII AGATCT 1 cut(s) 799
BisI GCNGC 5 cut(s) 154, 381, 812, 866, 1077
BlnI CCTAGG 1 cut(s) 695
BlsI GCNGC 5 cut(s) 155, 382, 813, 867, 1078
Bme1390I CCNGG 3 cut(s) 150, 862, 1328
Bme18I GGWCC 1 cut(s) 270
BmeRI GACNNNNNGTC 1 cut(s) 1273
BmeT110I CYCGRG 1 cut(s) 1142
BmgBI CACGTC 1 cut(s) 52
BmgT120I GGNCC 1 cut(s) 270
BmiI GGNNCC 1 cut(s) 70
BmrFI CCNGG 3 cut(s) 150, 862, 1328
BmsI GCATC 4 cut(s) 505, 745, 1189, 1344
BpiI GAAGAC 1 cut(s) 230
BpmI CTGGAG 3 cut(s) 132, 1070, 1399
Bpu10I CCTNAGC 1 cut(s) 1080
BpuMI CCSGG 1 cut(s) 862
BsaJI CCNNGG 5 cut(s) 157, 695, 1121, 1327, 1344
BsaWI WCCGGW 1 cut(s) 1462
BsaXI ACNNNNNCTCC 2 cut(s) 1397, 1427
Bsc4I CCNNNNNNNGG 2 cut(s) 173, 1105
Bse1I ACTGG 3 cut(s) 933, 1053, 1416
Bse21I CCTNAGG 1 cut(s) 1100
Bse3DI GCAATG 4 cut(s) 675, 765, 909, 945
BseBI CCWGG 2 cut(s) 150, 1328
BseDI CCNNGG 5 cut(s) 157, 695, 1121, 1327, 1344
BseGI GGATG 5 cut(s) 760, 832, 954, 1314, 1338
BseLI CCNNNNNNNGG 2 cut(s) 173, 1105
BseMI GCAATG 4 cut(s) 675, 765, 909, 945
BseMII CTCAG 2 cut(s) 330, 1476
BseNI ACTGG 3 cut(s) 933, 1053, 1416
BseRI GAGGAG 1 cut(s) 395
BseXI GCAGC 4 cut(s) 165, 367, 877, 1063
BshFI GGCC 2 cut(s) 1343, 1349
BshNI GGYRCC 1 cut(s) 68
BsiHKAI GWGCWC 1 cut(s) 311
BsiHKCI CYCGRG 1 cut(s) 1142
BsiSI CCGG 3 cut(s) 250, 862, 1463
BslI CCNNNNNNNGG 2 cut(s) 173, 1105
BsmAI GTCTC 2 cut(s) 251, 281
BsmBI CGTCTC 2 cut(s) 251, 281
BsmI GAATGC 1 cut(s) 677
BsnI GGCC 2 cut(s) 1343, 1349
BsoBI CYCGRG 1 cut(s) 1142
Bsp1286I GDGCHC 2 cut(s) 311, 1437
Bsp143I GATC 6 cut(s) 799, 906, 951, 1170, 1219, 1237
Bsp19I CCATGG 1 cut(s) 1121
BspACI CCGC 3 cut(s) 618, 811, 1372
BspANI GGCC 2 cut(s) 1343, 1349
BspCNI CTCAG 2 cut(s) 329, 1477
BspLI GGNNCC 1 cut(s) 70
BspMI ACCTGC 2 cut(s) 587, 905
BspPI GGATC 2 cut(s) 1214, 1232
BspQI GCTCTTC 1 cut(s) 1442
BspT107I GGYRCC 1 cut(s) 68
BsrDI GCAATG 4 cut(s) 675, 765, 909, 945
BsrI ACTGG 3 cut(s) 933, 1053, 1416
BssECI CCNNGG 5 cut(s) 157, 695, 1121, 1327, 1344
BssMI GATC 6 cut(s) 799, 906, 951, 1170, 1219, 1237
BssT1I CCWWGG 3 cut(s) 695, 1121, 1344
Bst2UI CCWGG 2 cut(s) 150, 1328
Bst4CI ACNGT 4 cut(s) 209, 495, 1228, 1471
Bst6I CTCTTC 2 cut(s) 873, 1442
BstDEI CTNAG 7 cut(s) 316, 449, 961, 1080, 1100, 1297, 1485
BstDSI CCRYGG 1 cut(s) 1121
BstEII GGTNACC 1 cut(s) 1465
BstF5I GGATG 5 cut(s) 760, 832, 954, 1314, 1338
BstHHI GCGC 1 cut(s) 385
BstKTI GATC 6 cut(s) 802, 909, 954, 1173, 1222, 1240
BstMAI GTCTC 2 cut(s) 251, 281
BstMBI GATC 6 cut(s) 799, 906, 951, 1170, 1219, 1237
BstMWI GCNNNNNNNGC 3 cut(s) 615, 674, 1085
BstNI CCWGG 2 cut(s) 150, 1328
BstNSI RCATGY 4 cut(s) 296, 840, 1069, 1326
BstPI GGTNACC 1 cut(s) 1465
BstSCI CCNGG 3 cut(s) 148, 860, 1326
BstV1I GCAGC 4 cut(s) 165, 367, 877, 1063
BstV2I GAAGAC 1 cut(s) 230
BstX2I RGATCY 1 cut(s) 799
BstXI CCANNNNNNTGG 1 cut(s) 1357
BstYI RGATCY 1 cut(s) 799
Bsu36I CCTNAGG 1 cut(s) 1100
BsuI GTATCC 2 cut(s) 614, 916
BsuRI GGCC 2 cut(s) 1343, 1349
BtgI CCRYGG 1 cut(s) 1121
BtrI CACGTC 1 cut(s) 52
BtsCI GGATG 5 cut(s) 760, 832, 954, 1314, 1338
BtsIMutI CAGTG 4 cut(s) 214, 940, 1046, 1233
BveI ACCTGC 2 cut(s) 587, 905
CfoI GCGC 1 cut(s) 385
Cfr13I GGNCC 1 cut(s) 270
CseI GACGC 2 cut(s) 298, 1415
Csp6I GTAC 2 cut(s) 1211, 1283
CviQI GTAC 2 cut(s) 1211, 1283
DdeI CTNAG 7 cut(s) 316, 449, 961, 1080, 1100, 1297, 1485
DpnI GATC 6 cut(s) 801, 908, 953, 1172, 1221, 1239
DpnII GATC 6 cut(s) 799, 906, 951, 1170, 1219, 1237
DrdI GACNNNNNNGTC 1 cut(s) 566
DriI GACNNNNNGTC 1 cut(s) 1273
DseDI GACNNNNNNGTC 1 cut(s) 566
EaeI YGGCCR 1 cut(s) 1341
Eam1104I CTCTTC 2 cut(s) 873, 1442
Eam1105I GACNNNNNGTC 1 cut(s) 1273
EarI CTCTTC 2 cut(s) 873, 1442
Eco130I CCWWGG 3 cut(s) 695, 1121, 1344
Eco24I GRGCYC 1 cut(s) 1437
Eco32I GATATC 1 cut(s) 1505
Eco47I GGWCC 1 cut(s) 270
Eco57I CTGAAG 1 cut(s) 704
Eco81I CCTNAGG 1 cut(s) 1100
Eco88I CYCGRG 1 cut(s) 1142
Eco91I GGTNACC 1 cut(s) 1465
EcoO65I GGTNACC 1 cut(s) 1465
EcoRII CCWGG 2 cut(s) 148, 1326
EcoRV GATATC 1 cut(s) 1505
EcoT14I CCWWGG 3 cut(s) 695, 1121, 1344
EcoT38I GRGCYC 1 cut(s) 1437
ErhI CCWWGG 3 cut(s) 695, 1121, 1344
Esp3I CGTCTC 2 cut(s) 251, 281
FalI AAGNNNNNCTT 6 cut(s) 314, 346, 990, 1022, 1093, 1125
FbaI TGATCA 2 cut(s) 906, 951
FblI GTMKAC 1 cut(s) 1230
Fnu4HI GCNGC 5 cut(s) 154, 381, 812, 866, 1077
FokI GGATG 5 cut(s) 767, 839, 961, 1321, 1345
FriOI GRGCYC 1 cut(s) 1437
Fsp4HI GCNGC 5 cut(s) 154, 381, 812, 866, 1077
FspBI CTAG 7 cut(s) 386, 629, 696, 702, 726, 1136, 1260
GlaI GCGC 1 cut(s) 384
GluI GCNGC 5 cut(s) 154, 381, 812, 866, 1077
GsuI CTGGAG 3 cut(s) 132, 1070, 1399
HaeIII GGCC 2 cut(s) 1343, 1349
HapII CCGG 3 cut(s) 250, 862, 1463
HgaI GACGC 2 cut(s) 298, 1415
HhaI GCGC 1 cut(s) 385
Hin6I GCGC 1 cut(s) 383
HinP1I GCGC 1 cut(s) 383
HindIII AAGCTT 1 cut(s) 24
HinfI GANTC 5 cut(s) 314, 351, 1094, 1274, 1412
HpaII CCGG 3 cut(s) 250, 862, 1463
HphI GGTGA 3 cut(s) 854, 1369, 1411
Hpy166II GTNNAC 3 cut(s) 1192, 1213, 1231
Hpy188I TCNGA 1 cut(s) 284
Hpy188III TCNNGA 5 cut(s) 122, 571, 920, 1142, 1174
Hpy8I GTNNAC 3 cut(s) 1192, 1213, 1231
Hpy99I CGWCG 1 cut(s) 53
HpyAV CCTTC 3 cut(s) 15, 1154, 1390
HpyCH4III ACNGT 4 cut(s) 209, 495, 1228, 1471
HpyCH4IV ACGT 2 cut(s) 51, 1194
HpyCH4V TGCA 6 cut(s) 582, 594, 640, 758, 914, 938
HpyF10VI GCNNNNNNNGC 3 cut(s) 615, 674, 1085
HpyF3I CTNAG 7 cut(s) 316, 449, 961, 1080, 1100, 1297, 1485
HpySE526I ACGT 2 cut(s) 51, 1194
HspAI GCGC 1 cut(s) 383
Ksp22I TGATCA 2 cut(s) 906, 951
Kzo9I GATC 6 cut(s) 799, 906, 951, 1170, 1219, 1237
LguI GCTCTTC 1 cut(s) 1442
LmnI GCTCC 1 cut(s) 532
Lsp1109I GCAGC 4 cut(s) 165, 367, 877, 1063
LweI GCATC 4 cut(s) 505, 745, 1189, 1344
MaeI CTAG 7 cut(s) 386, 629, 696, 702, 726, 1136, 1260
MaeII ACGT 2 cut(s) 51, 1194
MaeIII GTNAC 3 cut(s) 44, 1465, 1471
MalI GATC 6 cut(s) 801, 908, 953, 1172, 1221, 1239
MboI GATC 6 cut(s) 799, 906, 951, 1170, 1219, 1237
MboII GAAGA 5 cut(s) 230, 809, 890, 1020, 1429
MflI RGATCY 1 cut(s) 799
MhlI GDGCHC 2 cut(s) 311, 1437
MlsI TGGCCA 1 cut(s) 1343
MluCI AATT 9 cut(s) 93, 141, 259, 435, 469, 747, 956, 1445, 1489
MluNI TGGCCA 1 cut(s) 1343
MlyI GAGTC 3 cut(s) 308, 1283, 1406
Mox20I TGGCCA 1 cut(s) 1343
MroXI GAANNNNTTC 2 cut(s) 981, 1024
MscI TGGCCA 1 cut(s) 1343
MseI TTAA 7 cut(s) 204, 332, 789, 899, 1059, 1167, 1448
MslI CAYNNNNRTG 2 cut(s) 660, 992
Msp20I TGGCCA 1 cut(s) 1343
MspA1I CMGCKG 1 cut(s) 811
MspI CCGG 3 cut(s) 250, 862, 1463
MspR9I CCNGG 3 cut(s) 150, 862, 1328
Mva1269I GAATGC 1 cut(s) 677
MvaI CCWGG 2 cut(s) 150, 1328
MwoI GCNNNNNNNGC 3 cut(s) 615, 674, 1085
NciI CCSGG 1 cut(s) 862
NcoI CCATGG 1 cut(s) 1121
NdeII GATC 6 cut(s) 799, 906, 951, 1170, 1219, 1237
NlaIV GGNNCC 1 cut(s) 70
NmeAIII GCCGAG 1 cut(s) 182
NmuCI GTSAC 1 cut(s) 1471
NspI RCATGY 4 cut(s) 296, 840, 1069, 1326
PaeR7I CTCGAG 1 cut(s) 1142
PciSI GCTCTTC 1 cut(s) 1442
PcsI WCGNNNNNNNCGW 1 cut(s) 1149
PctI GAATGC 1 cut(s) 677
PdmI GAANNNNTTC 2 cut(s) 981, 1024
PfeI GAWTC 2 cut(s) 351, 1094
PflMI CCANNNNNTGG 1 cut(s) 173
PkrI GCNGC 5 cut(s) 155, 382, 813, 867, 1078
PleI GAGTC 3 cut(s) 308, 1282, 1406
PpsI GAGTC 3 cut(s) 308, 1282, 1406
Psp1406I AACGTT 1 cut(s) 1194
Psp6I CCWGG 2 cut(s) 148, 1326
PspEI GGTNACC 1 cut(s) 1465
PspGI CCWGG 2 cut(s) 148, 1326
PspN4I GGNNCC 1 cut(s) 70
PspPI GGNCC 1 cut(s) 270
PsuI RGATCY 1 cut(s) 799
RsaI GTAC 2 cut(s) 1212, 1284
RsaNI GTAC 2 cut(s) 1211, 1283
RseI CAYNNNNRTG 2 cut(s) 660, 992
SapI GCTCTTC 1 cut(s) 1442
SaqAI TTAA 7 cut(s) 204, 332, 789, 899, 1059, 1167, 1448
SatI GCNGC 5 cut(s) 154, 381, 812, 866, 1077
Sau3AI GATC 6 cut(s) 799, 906, 951, 1170, 1219, 1237
Sau96I GGNCC 1 cut(s) 270
SchI GAGTC 3 cut(s) 308, 1283, 1406
ScrFI CCNGG 3 cut(s) 150, 862, 1328
SduI GDGCHC 2 cut(s) 311, 1437
SfaNI GCATC 4 cut(s) 505, 745, 1189, 1344
Sfr274I CTCGAG 1 cut(s) 1142
SinI GGWCC 1 cut(s) 270
SlaI CTCGAG 1 cut(s) 1142
SmiMI CAYNNNNRTG 2 cut(s) 660, 992
SmlI CTYRAG 1 cut(s) 1142
SmoI CTYRAG 1 cut(s) 1142
Sse9I AATT 9 cut(s) 93, 141, 259, 435, 469, 747, 956, 1445, 1489
SsiI CCGC 3 cut(s) 618, 811, 1372
SspMI CTAG 7 cut(s) 386, 629, 696, 702, 726, 1136, 1260
StyD4I CCNGG 3 cut(s) 148, 860, 1326
StyI CCWWGG 3 cut(s) 695, 1121, 1344
TaaI ACNGT 4 cut(s) 209, 495, 1228, 1471
TaiI ACGT 2 cut(s) 54, 1197
TaqI TCGA 2 cut(s) 305, 1143
TasI AATT 9 cut(s) 93, 141, 259, 435, 469, 747, 956, 1445, 1489
TatI WGTACW 1 cut(s) 1210
TauI GCSGC 1 cut(s) 814
TfiI GAWTC 2 cut(s) 351, 1094
Tru1I TTAA 7 cut(s) 204, 332, 789, 899, 1059, 1167, 1448
Tru9I TTAA 7 cut(s) 204, 332, 789, 899, 1059, 1167, 1448
TscAI CASTG 4 cut(s) 214, 940, 1053, 1240
TseFI GTSAC 1 cut(s) 1471
TseI GCWGC 4 cut(s) 153, 380, 865, 1076
Tsp45I GTSAC 1 cut(s) 1471
TspDTI ATGAA 8 cut(s) 160, 181, 383, 516, 843, 891, 1010, 1349
TspGWI ACGGA 3 cut(s) 224, 326, 1245
TspRI CASTG 4 cut(s) 214, 940, 1053, 1240
Van91I CCANNNNNTGG 1 cut(s) 173
VpaK11BI GGWCC 1 cut(s) 270
XapI RAATTY 2 cut(s) 141, 956
XceI RCATGY 4 cut(s) 296, 840, 1069, 1326
XhoI CTCGAG 1 cut(s) 1142
XmaJI CCTAGG 1 cut(s) 695
XmiI GTMKAC 1 cut(s) 1230
XmnI GAANNNNTTC 2 cut(s) 981, 1024
XspI CTAG 7 cut(s) 386, 629, 696, 702, 726, 1136, 1260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.