Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001051

Physical Location & Seq

Genomic Coordinates Reverse (-)

45665088 .. 45667507

Gene Structure 2420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0305400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGGCCAAGGAACAATTGGAGGTGCTCAATGCACTTGACACCGCAAAAACACAATGGTATCATTTCACTGCAATCATCATTGCTGGAATGGGATTCTTTACCGACGCGTATGATCTCTTCTGCATATCCCTTGTCACCAAATTGCTCGGCCGCATATACTATCATGTTGATGGTGCAGCCAAGCCCGGAACATTGCCTCCGAATGTGTCTGCTGCTGTCAATGGTGTTGCATTTTGTGGAACCTTGTCCGGGCAGATCTTCTTTGGCTGGCTCGGTGACAAAATGGGGCGAAAGAAGGTGTATGGCATGACTCTGATGATCATGGTCATTTGCTCCATTGGTTCAGGTCTCTCCTTCAGCCATGACCCGAAAGCTGTGATTGCAACCCTTTGCTTCTTCCGGTTCTGGCTTGGGTTTGGTATTGGTGGTGACTACCCTCTTTCAGCCACCATCATGTCTGAATACGCCAACAAGAAGACTCGTGGTGCCTTCATTGCCGCGGTCTTTGCCATGCAGGGTTTTGGAATTTTAGCAGGAGGGTTATTTGCAATGTTTGCAGCTTTCATATTTGAGGCCAAGTTCAAGGCTCCAGCCTATGAAGTTGATCCAATTGGTTCAACTGTCCCACAAGCAGACTACCTTTGGAGAATTATTCTGATTGTTGGTGCATTTCCGGCAGCACTAACCTACTACTGGCGGTTGAAGATGCCTGAAACTGCTCGCTACACAGCGCTCGTTGCCAACAATGTTTCCCAGGCAGCAGCTGATATGTCAAAAGTTATGCAGGTTGACATTGAATCTGAACCGGCCAGGGTTCAGCAACCCACCGTCTCTTTTGGTTTGTTCTCTAAGGAGTTCCTGCGCCGCCATGGACTTCACTTGCTCGGAACCACAAGCACATGGTTCTTGCTTGACATTGCATTTTACAGTCAAAATCTGTTCCAGAAGGACATTTTCAGTGCCATTGGATGGATTCCTAATGCCAAGACTATGAATGCCATTGGAGAAGTTTATAAAATTGCAAGGGCGCAAACTCTTATTGCTCTATGCAGCACTGTGCCTGGTTACTGGTTCACTGTGGCCTTCATAGACAGAATGGGAAGATTTAAAATCCAATTGATGGGGTTCTTCTTCATGACAGTGTTCATGTTTGCATTGGCAATTCCATACGATTACTGGTCCGATAAGGATCATGTGATCGGGTTTGTGATACTGTATGCACTGACTTTCTTCTTTGCAAATTTCGGACCCAATGCTACTACATTTGTGGTACCAGCTGAGATTTTCCCAGCTAGGCTGAGGTCTACTTGCCATGGCGTATCGGCAGCAGCAGGAAAGTTAGGGGCAATAGTAGGTGCCTTTGGGTTTTTGTATTTGGCTCAACCTCAGGACAAGACTAAAGCAGAAGCAGGGTTCCCCGCTGGTATAGGCGTCAAGAATTCACTCATCGTTTTGGGTGTGGTCAACTTATTGGGTATGCTATTCACATTCTTTGTTCCTGAATCGAAAGGGAAGTCTTTGGAGGAAATGTCAGGTGAGGGCAATGAAGAAAGCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0006694 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0010268 GO:0010295 GO:0010817 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016491 GO:0016705 GO:0016709 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0042592 GO:0044238 GO:0048856 GO:0048878 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00830 ko01100 map00830 map01100

Pfam Domains

Protein Families

p450

Protein Analysis

519

Amino Acids

56.93

Weight (kDa)

8.68

Isoelectric Point (pI)

29.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	26 - 511	1.2e-47	Sugar (and other) transporter
MFS_1	PF07690	66 - 453	9.5e-21	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19640
fragaria_vesca	FvH4_2g39441 FvH4_2g39441 FvH4_2g39450 FvH4_4g32530 FvH4_4g32530 FvH4_4g32530 FvH4_4g32960
malus_domestica	MD08G1027000.v1.1 MD08G1027100.v1.1 MD08G1027300.v1.1 MD15G1023600.v1.1 MD15G1023700.v1.1
prunus_persica	Prupe.1G375700_v2.0.a1 Prupe.1G375800_v2.0.a1
pyrus_communis	pycom08g02110 pycom15g01960 pycom15g01970 pycom15g02010
rosa_chinensis	RchiOBHm_Chr4g0441411 RchiOBHm_Chr6g0301501 RchiOBHm_Chr6g0301511 RchiOBHm_Chr6g0301521
rosa_laevigata	RLG00000006093 RLG00000006094 RLG00000011247 RLG00000011248
rosa_multiflora	Rmu_co8385149.1_g000001 Rmu_co8452201.1_g000002 Rmu_sc0004253.1_g000002 Rmu_sc0034371.1_g000001 Rmu_sc0038282.1_g000002 Rmu_ssc0000452.1_g000002
rosa_roxburghii	Rroxscaffold_3G00235790 Rroxscaffold_5G00382280 Rroxscaffold_7G00166690 Rroxscaffold_7G00166700
rosa_rugosa	Rorug04G0333100 Rorug04G0333300 Rorug04G0333400 Rorug06G0305400 Rorug06G0305500 Rorug06G0305600 Rorug06G0305700 Rorug07G0216800 Rorug07G0217000
rosa_samantha	Rh4AG385100 Rh4BG399100 Rh4BG399200 Rh4CG414200 Rh4CG414300 Rh4DG391800 Rh6AG419400 Rh6BG425300 Rh6CG432500 Rh6DG418500 Rh6DG418600 Rh7BG350600
rosa_wichuraiana	Rw4G033250 Rw6G036260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1014
Acc36I	ACCTGC	1 cut(s)	775
Acc65I	GGTACC	1 cut(s)	1270
AccB1I	GGYRCC	3 cut(s)	485, 1270, 1355
AccB7I	CCANNNNNTGG	2 cut(s)	969, 1120
AccI	GTMKAC	1 cut(s)	1304
AccII	CGCG	2 cut(s)	107, 500
AciI	CCGC	7 cut(s)	42, 151, 498, 500, 697, 865, 1419
AclWI	GGATC	2 cut(s)	599, 1197
AcoI	YGGCCR	3 cut(s)	3, 148, 807
AcsI	RAATTY	3 cut(s)	525, 1240, 1438
AcuI	CTGAAG	1 cut(s)	340
AcyI	GRCGYC	1 cut(s)	1431
AfaI	GTAC	1 cut(s)	1272
AfeI	AGCGCT	1 cut(s)	732
AfiI	CCNNNNNNNGG	4 cut(s)	249, 693, 969, 1120
AflIII	ACRYGT	1 cut(s)	105
AgsI	TTSAA	4 cut(s)	583, 618, 703, 797
AjnI	CCWGG	3 cut(s)	753, 809, 1060
AloI	GAACNNNNNNTCC	2 cut(s)	181, 213
AluBI	AGCT	5 cut(s)	374, 560, 764, 1277, 1292
AluI	AGCT	5 cut(s)	374, 560, 764, 1277, 1292
Alw21I	GWGCWC	1 cut(s)	27
Alw26I	GTCTC	2 cut(s)	353, 835
AlwI	GGATC	2 cut(s)	599, 1197
AlwNI	CAGNNNCTG	1 cut(s)	764
Aor51HI	AGCGCT	1 cut(s)	732
AoxI	GGCC	5 cut(s)	3, 148, 573, 807, 1080
ApeKI	GCWGC	9 cut(s)	176, 212, 557, 677, 758, 761, 1050, 1325, 1328
ApoI	RAATTY	3 cut(s)	525, 1240, 1438
ArsI	GACNNNNNNTTYG	2 cut(s)	1499, 1531
Asp718I	GGTACC	1 cut(s)	1270
AspLEI	GCGC	3 cut(s)	733, 864, 1030
AspS9I	GGNCC	2 cut(s)	1179, 1247
AsuC2I	CCSGG	2 cut(s)	186, 250
AsuHPI	GGTGA	4 cut(s)	127, 287, 440, 1547
AvaII	GGWCC	2 cut(s)	1179, 1247
AxyI	CCTNAGG	1 cut(s)	1386
BaeI	ACNNNNGTAYC	2 cut(s)	41, 74
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	3 cut(s)	485, 1270, 1355
BarI	GAAGNNNNNNTAC	2 cut(s)	101, 133
BauI	CACGAG	1 cut(s)	480
BbsI	GAAGAC	1 cut(s)	482
Bbv12I	GWGCWC	1 cut(s)	27
BbvCI	CCTCAGC	1 cut(s)	1298
BbvI	GCAGC	9 cut(s)	188, 199, 569, 689, 770, 773, 1062, 1337, 1340
BccI	CCATC	4 cut(s)	164, 458, 963, 1114
BciT130I	CCWGG	3 cut(s)	755, 811, 1062
BclI	TGATCA	1 cut(s)	318
BcnI	CCSGG	2 cut(s)	186, 250
BcoDI	GTCTC	2 cut(s)	353, 835
BfaI	CTAG	1 cut(s)	1293
BfoI	RGCGCY	1 cut(s)	734
BfuAI	ACCTGC	1 cut(s)	775
BglII	AGATCT	1 cut(s)	255
Bme1390I	CCNGG	5 cut(s)	186, 250, 755, 811, 1062
Bme18I	GGWCC	2 cut(s)	1179, 1247
BmgT120I	GGNCC	2 cut(s)	1179, 1247
BmiI	GGNNCC	8 cut(s)	241, 487, 588, 889, 1249, 1272, 1357, 1415
BmrFI	CCNGG	5 cut(s)	186, 250, 755, 811, 1062
BmsI	GCATC	1 cut(s)	696
BpiI	GAAGAC	1 cut(s)	482
BpmI	CTGGAG	1 cut(s)	573
Bpu10I	CCTNAGC	1 cut(s)	1298
BpuMI	CCSGG	2 cut(s)	186, 250
BsaBI	GATNNNNATC	1 cut(s)	1188
BsaHI	GRCGYC	1 cut(s)	1431
BsaI	GGTCTC	1 cut(s)	353
BsaJI	CCNNGG	6 cut(s)	6, 498, 753, 810, 868, 1312
BsaWI	WCCGGW	1 cut(s)	399
BsaXI	ACNNNNNCTCC	4 cut(s)	181, 211, 1514, 1544
Bsc4I	CCNNNNNNNGG	4 cut(s)	249, 693, 969, 1120
Bse118I	RCCGGY	1 cut(s)	805
Bse1I	ACTGG	3 cut(s)	698, 1073, 1181
Bse21I	CCTNAGG	1 cut(s)	1386
Bse3DI	GCAATG	6 cut(s)	78, 191, 492, 555, 915, 1549
Bse8I	GATNNNNATC	1 cut(s)	1188
BseBI	CCWGG	3 cut(s)	755, 811, 1062
BseDI	CCNNGG	6 cut(s)	6, 498, 753, 810, 868, 1312
BseGI	GGATG	1 cut(s)	974
BseJI	GATNNNNATC	1 cut(s)	1188
BseLI	CCNNNNNNNGG	4 cut(s)	249, 693, 969, 1120
BseMI	GCAATG	6 cut(s)	78, 191, 492, 555, 915, 1549
BseMII	CTCAG	3 cut(s)	1269, 1289, 1400
BseNI	ACTGG	3 cut(s)	698, 1073, 1181
BseX3I	CGGCCG	1 cut(s)	148
BseXI	GCAGC	9 cut(s)	188, 199, 569, 689, 770, 773, 1062, 1337, 1340
BseYI	CCCAGC	1 cut(s)	1288
BsgI	GTGCAG	1 cut(s)	195
Bsh1236I	CGCG	2 cut(s)	107, 500
Bsh1285I	CGRYCG	1 cut(s)	151
BshFI	GGCC	5 cut(s)	5, 150, 575, 809, 1082
BshNI	GGYRCC	3 cut(s)	485, 1270, 1355
BsiEI	CGRYCG	1 cut(s)	151
BsiHKAI	GWGCWC	1 cut(s)	27
BsiSI	CCGG	5 cut(s)	186, 249, 400, 674, 806
BslFI	GGGAC	1 cut(s)	608
BslI	CCNNNNNNNGG	4 cut(s)	249, 693, 969, 1120
BsmAI	GTCTC	2 cut(s)	353, 835
BsmBI	CGTCTC	1 cut(s)	835
BsmFI	GGGAC	1 cut(s)	608
BsmI	GAATGC	1 cut(s)	1000
BsnI	GGCC	5 cut(s)	5, 150, 575, 809, 1082
Bso31I	GGTCTC	1 cut(s)	353
Bsp1286I	GDGCHC	1 cut(s)	27
Bsp143I	GATC	6 cut(s)	112, 255, 318, 604, 1189, 1197
Bsp19I	CCATGG	2 cut(s)	868, 1312
BspACI	CCGC	7 cut(s)	42, 151, 498, 500, 697, 865, 1419
BspANI	GGCC	5 cut(s)	5, 150, 575, 809, 1082
BspCNI	CTCAG	3 cut(s)	1270, 1290, 1399
BspFNI	CGCG	2 cut(s)	107, 500
BspHI	TCATGA	1 cut(s)	1134
BspLI	GGNNCC	8 cut(s)	241, 487, 588, 889, 1249, 1272, 1357, 1415
BspMI	ACCTGC	1 cut(s)	775
BspPI	GGATC	2 cut(s)	599, 1197
BspT107I	GGYRCC	3 cut(s)	485, 1270, 1355
BspTNI	GGTCTC	1 cut(s)	353
BsrDI	GCAATG	6 cut(s)	78, 191, 492, 555, 915, 1549
BsrFI	RCCGGY	1 cut(s)	805
BsrI	ACTGG	3 cut(s)	698, 1073, 1181
BssAI	RCCGGY	1 cut(s)	805
BssECI	CCNNGG	6 cut(s)	6, 498, 753, 810, 868, 1312
BssMI	GATC	6 cut(s)	112, 255, 318, 604, 1189, 1197
BssNI	GRCGYC	1 cut(s)	1431
BssSI	CACGAG	1 cut(s)	480
BssT1I	CCWWGG	3 cut(s)	6, 868, 1312
Bst2BI	CACGAG	1 cut(s)	480
Bst2UI	CCWGG	3 cut(s)	755, 811, 1062
Bst4CI	ACNGT	7 cut(s)	622, 829, 929, 1057, 1078, 1141, 1215
Bst6I	CTCTTC	1 cut(s)	122
BstACI	GRCGYC	1 cut(s)	1431
BstAPI	GCANNNNNTGC	1 cut(s)	554
BstC8I	GCNNGC	2 cut(s)	269, 721
BstDEI	CTNAG	4 cut(s)	849, 1278, 1298, 1386
BstDSI	CCRYGG	3 cut(s)	498, 868, 1312
BstF5I	GGATG	1 cut(s)	974
BstFNI	CGCG	2 cut(s)	107, 500
BstH2I	RGCGCY	1 cut(s)	734
BstHHI	GCGC	3 cut(s)	733, 864, 1030
BstKTI	GATC	6 cut(s)	115, 258, 321, 607, 1192, 1200
BstMAI	GTCTC	2 cut(s)	353, 835
BstMBI	GATC	6 cut(s)	112, 255, 318, 604, 1189, 1197
BstMCI	CGRYCG	1 cut(s)	151
BstMWI	GCNNNNNNNGC	6 cut(s)	380, 494, 506, 554, 674, 737
BstNI	CCWGG	3 cut(s)	755, 811, 1062
BstSCI	CCNGG	5 cut(s)	184, 248, 753, 809, 1060
BstUI	CGCG	2 cut(s)	107, 500
BstV1I	GCAGC	9 cut(s)	188, 199, 569, 689, 770, 773, 1062, 1337, 1340
BstV2I	GAAGAC	1 cut(s)	482
BstX2I	RGATCY	1 cut(s)	255
BstYI	RGATCY	1 cut(s)	255
BstZI	CGGCCG	1 cut(s)	148
Bsu36I	CCTNAGG	1 cut(s)	1386
BsuRI	GGCC	5 cut(s)	5, 150, 575, 809, 1082
BtgI	CCRYGG	3 cut(s)	498, 868, 1312
BtsCI	GGATG	1 cut(s)	974
BtsI	GCAGTG	1 cut(s)	66
BtsIMutI	CAGTG	6 cut(s)	66, 964, 1053, 1074, 1146, 1220
BveI	ACCTGC	1 cut(s)	775
Cac8I	GCNNGC	2 cut(s)	269, 721
CaiI	CAGNNNCTG	1 cut(s)	764
CciI	TCATGA	1 cut(s)	1134
CfoI	GCGC	3 cut(s)	733, 864, 1030
Cfr10I	RCCGGY	1 cut(s)	805
Cfr13I	GGNCC	2 cut(s)	1179, 1247
Cfr42I	CCGCGG	1 cut(s)	501
CseI	GACGC	2 cut(s)	113, 1420
Csp6I	GTAC	1 cut(s)	1271
CviQI	GTAC	1 cut(s)	1271
DdeI	CTNAG	4 cut(s)	849, 1278, 1298, 1386
DpnI	GATC	6 cut(s)	114, 257, 320, 606, 1191, 1199
DpnII	GATC	6 cut(s)	112, 255, 318, 604, 1189, 1197
DraI	TTTAAA	1 cut(s)	1108
EaeI	YGGCCR	3 cut(s)	3, 148, 807
EagI	CGGCCG	1 cut(s)	148
Eam1104I	CTCTTC	1 cut(s)	122
EarI	CTCTTC	1 cut(s)	122
EclXI	CGGCCG	1 cut(s)	148
Eco130I	CCWWGG	3 cut(s)	6, 868, 1312
Eco31I	GGTCTC	1 cut(s)	353
Eco47I	GGWCC	2 cut(s)	1179, 1247
Eco47III	AGCGCT	1 cut(s)	732
Eco52I	CGGCCG	1 cut(s)	148
Eco57I	CTGAAG	1 cut(s)	340
Eco81I	CCTNAGG	1 cut(s)	1386
EcoRI	GAATTC	1 cut(s)	1438
EcoRII	CCWGG	3 cut(s)	753, 809, 1060
EcoT14I	CCWWGG	3 cut(s)	6, 868, 1312
ErhI	CCWWGG	3 cut(s)	6, 868, 1312
Esp3I	CGTCTC	1 cut(s)	835
FaqI	GGGAC	1 cut(s)	608
FauI	CCCGC	1 cut(s)	1426
FbaI	TGATCA	1 cut(s)	318
FblI	GTMKAC	1 cut(s)	1304
FokI	GGATG	1 cut(s)	981
FspBI	CTAG	1 cut(s)	1293
GlaI	GCGC	3 cut(s)	732, 863, 1029
GsaI	CCCAGC	1 cut(s)	1292
GsuI	CTGGAG	1 cut(s)	573
HaeII	RGCGCY	1 cut(s)	734
HaeIII	GGCC	5 cut(s)	5, 150, 575, 809, 1082
HapII	CCGG	5 cut(s)	186, 249, 400, 674, 806
HgaI	GACGC	2 cut(s)	113, 1420
HhaI	GCGC	3 cut(s)	733, 864, 1030
Hin1I	GRCGYC	1 cut(s)	1431
Hin6I	GCGC	3 cut(s)	731, 862, 1028
HinP1I	GCGC	3 cut(s)	731, 862, 1028
HincII	GTYRAC	2 cut(s)	790, 1465
HindII	GTYRAC	2 cut(s)	790, 1465
HinfI	GANTC	6 cut(s)	93, 310, 478, 797, 973, 1502
HpaII	CCGG	5 cut(s)	186, 249, 400, 674, 806
HphI	GGTGA	4 cut(s)	127, 287, 440, 1547
Hpy166II	GTNNAC	4 cut(s)	790, 1074, 1305, 1465
Hpy188I	TCNGA	8 cut(s)	201, 315, 460, 657, 802, 887, 1183, 1247
Hpy188III	TCNNGA	5 cut(s)	943, 1135, 1388, 1435, 1499
Hpy8I	GTNNAC	4 cut(s)	790, 1074, 1305, 1465
Hpy99I	CGWCG	1 cut(s)	107
HpyAV	CCTTC	5 cut(s)	289, 364, 499, 940, 1093
HpyCH4III	ACNGT	7 cut(s)	622, 829, 929, 1057, 1078, 1141, 1215
HpyF10VI	GCNNNNNNNGC	6 cut(s)	380, 494, 506, 554, 674, 737
HpyF3I	CTNAG	4 cut(s)	849, 1278, 1298, 1386
Hsp92I	GRCGYC	1 cut(s)	1431
HspAI	GCGC	3 cut(s)	731, 862, 1028
KpnI	GGTACC	1 cut(s)	1274
Ksp22I	TGATCA	1 cut(s)	318
KspI	CCGCGG	1 cut(s)	501
Kzo9I	GATC	6 cut(s)	112, 255, 318, 604, 1189, 1197
LmnI	GCTCC	2 cut(s)	338, 592
Lsp1109I	GCAGC	9 cut(s)	188, 199, 569, 689, 770, 773, 1062, 1337, 1340
LweI	GCATC	1 cut(s)	696
MaeI	CTAG	1 cut(s)	1293
MaeIII	GTNAC	4 cut(s)	133, 275, 428, 1064
MalI	GATC	6 cut(s)	114, 257, 320, 606, 1191, 1199
MboI	GATC	6 cut(s)	112, 255, 318, 604, 1189, 1197
MfeI	CAATTG	3 cut(s)	14, 609, 1115
MflI	RGATCY	1 cut(s)	255
MhlI	GDGCHC	1 cut(s)	27
MlsI	TGGCCA	1 cut(s)	5
MluI	ACGCGT	1 cut(s)	105
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	304, 472
MnlI	CCTC	9 cut(s)	13, 207, 447, 530, 565, 1293, 1395, 1516, 1531
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	1 cut(s)	1107
MslI	CAYNNNNRTG	3 cut(s)	168, 452, 1139
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	4 cut(s)	500, 764, 1277, 1421
MspI	CCGG	5 cut(s)	186, 249, 400, 674, 806
MspR9I	CCNGG	5 cut(s)	186, 250, 755, 811, 1062
MunI	CAATTG	3 cut(s)	14, 609, 1115
Mva1269I	GAATGC	1 cut(s)	1000
MvaI	CCWGG	3 cut(s)	755, 811, 1062
MvnI	CGCG	2 cut(s)	107, 500
MwoI	GCNNNNNNNGC	6 cut(s)	380, 494, 506, 554, 674, 737
NciI	CCSGG	2 cut(s)	186, 250
NcoI	CCATGG	2 cut(s)	868, 1312
NdeII	GATC	6 cut(s)	112, 255, 318, 604, 1189, 1197
NlaIV	GGNNCC	8 cut(s)	241, 487, 588, 889, 1249, 1272, 1357, 1415
NmeAIII	GCCGAG	1 cut(s)	126
NmuCI	GTSAC	3 cut(s)	133, 275, 428
PagI	TCATGA	1 cut(s)	1134
PctI	GAATGC	1 cut(s)	1000
PfeI	GAWTC	4 cut(s)	93, 797, 973, 1502
PflMI	CCANNNNNTGG	2 cut(s)	969, 1120
PleI	GAGTC	2 cut(s)	304, 472
PpsI	GAGTC	2 cut(s)	304, 472
PsiI	TTATAA	1 cut(s)	1014
Psp6I	CCWGG	3 cut(s)	753, 809, 1060
PspFI	CCCAGC	1 cut(s)	1288
PspGI	CCWGG	3 cut(s)	753, 809, 1060
PspN4I	GGNNCC	8 cut(s)	241, 487, 588, 889, 1249, 1272, 1357, 1415
PspPI	GGNCC	2 cut(s)	1179, 1247
PstNI	CAGNNNCTG	1 cut(s)	764
PsuI	RGATCY	1 cut(s)	255
PvuII	CAGCTG	2 cut(s)	764, 1277
RsaI	GTAC	1 cut(s)	1272
RsaNI	GTAC	1 cut(s)	1271
RseI	CAYNNNNRTG	3 cut(s)	168, 452, 1139
SacII	CCGCGG	1 cut(s)	501
SaqAI	TTAA	1 cut(s)	1107
Sau3AI	GATC	6 cut(s)	112, 255, 318, 604, 1189, 1197
Sau96I	GGNCC	2 cut(s)	1179, 1247
SchI	GAGTC	2 cut(s)	304, 472
ScrFI	CCNGG	5 cut(s)	186, 250, 755, 811, 1062
SduI	GDGCHC	1 cut(s)	27
SfaNI	GCATC	1 cut(s)	696
Sfr303I	CCGCGG	1 cut(s)	501
SgrBI	CCGCGG	1 cut(s)	501
SinI	GGWCC	2 cut(s)	1179, 1247
SmiMI	CAYNNNNRTG	3 cut(s)	168, 452, 1139
SsiI	CCGC	7 cut(s)	42, 151, 498, 500, 697, 865, 1419
SspMI	CTAG	1 cut(s)	1293
StyD4I	CCNGG	5 cut(s)	184, 248, 753, 809, 1060
StyI	CCWWGG	3 cut(s)	6, 868, 1312
TaaI	ACNGT	7 cut(s)	622, 829, 929, 1057, 1078, 1141, 1215
TaqI	TCGA	1 cut(s)	1505
TauI	GCSGC	3 cut(s)	153, 500, 867
TfiI	GAWTC	4 cut(s)	93, 797, 973, 1502
Tru1I	TTAA	1 cut(s)	1107
Tru9I	TTAA	1 cut(s)	1107
TscAI	CASTG	6 cut(s)	73, 964, 1060, 1081, 1146, 1227
TseFI	GTSAC	3 cut(s)	133, 275, 428
TseI	GCWGC	9 cut(s)	176, 212, 557, 677, 758, 761, 1050, 1325, 1328
Tsp45I	GTSAC	3 cut(s)	133, 275, 428
TspDTI	ATGAA	8 cut(s)	481, 553, 612, 1007, 1075, 1123, 1135, 1560
TspRI	CASTG	6 cut(s)	73, 964, 1060, 1081, 1146, 1227
Van91I	CCANNNNNTGG	2 cut(s)	969, 1120
VpaK11BI	GGWCC	2 cut(s)	1179, 1247
XapI	RAATTY	3 cut(s)	525, 1240, 1438
XcmI	CCANNNNNNNNNTGG	2 cut(s)	13, 1173
XmiI	GTMKAC	1 cut(s)	1304
XspI	CTAG	1 cut(s)	1293

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.