Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001051

Physical Location & Seq

Genomic Coordinates Forward (+)

34075620 .. 34077450

Gene Structure 1831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G375800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 702 bp

ATGGAGGTGAACCAAATACTTCACATGAACAAAGGAGATGGCAAGACTAGTTATTCTCAAAACTCCCAAGTGCAGGGCAAAATATTATCGGTTGCAAAGCCAATCATTCATGAAGCCGTGCTAGAAATATTGATCTCAAATAATATAGAGAGCATGGGGATTGCCGATTTGGGTTGCTCATCTGGACCCAACACCTTTCTGCCCATCTCCTACATCATGGATGCCATACATGCGAAGCGCAGCAGCCTCGGCCTCCAGCTGTCCCCATCATCAACAACAGAGTTCAGAGTGTACCTCAATGACCTCTTCAGCAACGACTTCAACACCATTTTTATGTCACTCCCTGCATTCTACAACAACTTGAAACAAGAGAAAGGTCCTGAATTTGGTTCGGTCTTTGTTTCTGCCGTGCCCGGTTCGTTTCACGGTAGGTTGTTTCCGGCCAAGACTTTGCATTTTGTGCACTCTTCTTGTAGTATCCACTGGCTCTCTCGGGTCCCCCCTGCCCTCAGCAAGACCCCGGCGGAGGCAGCTGGCTCGGCCTTGAACAGGGGAAAGATCTACATTTCTAAGACCAGCCCTCAATGCGTTTTGGACGCATATTCACTTCAGTTTCACGAAGACTTTTCATCGTTTCTTAAGTCCCGCGCTGAAGAAGTAGTTGGCGGAGGACGAATGGTGTTGTCACTCATTGGCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006950 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009611 GO:0009694 GO:0009987 GO:0010817 GO:0016740 GO:0016741 GO:0019752 GO:0030795 GO:0032259 GO:0032787 GO:0042445 GO:0043436 GO:0044237 GO:0044281 GO:0044424 GO:0044464 GO:0050896 GO:0065007 GO:0065008 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00592 ko01110 map00592 map01110

Pfam Domains

Protein Families

Methyltransf_7

Protein Analysis

234

Amino Acids

25.44

Weight (kDa)

8.41

Isoelectric Point (pI)

50.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19640
fragaria_vesca	FvH4_2g39441 FvH4_2g39441 FvH4_2g39450 FvH4_4g32530 FvH4_4g32530 FvH4_4g32530 FvH4_4g32960
malus_domestica	MD08G1027000.v1.1 MD08G1027100.v1.1 MD08G1027300.v1.1 MD15G1023600.v1.1 MD15G1023700.v1.1
prunus_persica	Prupe.1G375700_v2.0.a1 Prupe.1G375800_v2.0.a1
pyrus_communis	pycom08g02110 pycom15g01960 pycom15g01970 pycom15g02010
rosa_chinensis	RchiOBHm_Chr4g0441411 RchiOBHm_Chr6g0301501 RchiOBHm_Chr6g0301511 RchiOBHm_Chr6g0301521
rosa_laevigata	RLG00000006093 RLG00000006094 RLG00000011247 RLG00000011248
rosa_multiflora	Rmu_co8385149.1_g000001 Rmu_co8452201.1_g000002 Rmu_sc0004253.1_g000002 Rmu_sc0034371.1_g000001 Rmu_sc0038282.1_g000002 Rmu_ssc0000452.1_g000002
rosa_roxburghii	Rroxscaffold_3G00235790 Rroxscaffold_5G00382280 Rroxscaffold_7G00166690 Rroxscaffold_7G00166700
rosa_rugosa	Rorug04G0333100 Rorug04G0333300 Rorug04G0333400 Rorug06G0305400 Rorug06G0305500 Rorug06G0305600 Rorug06G0305700 Rorug07G0216800 Rorug07G0217000
rosa_samantha	Rh4AG385100 Rh4BG399100 Rh4BG399200 Rh4CG414200 Rh4CG414300 Rh4DG391800 Rh6AG419400 Rh6BG425300 Rh6CG432500 Rh6DG418500 Rh6DG418600 Rh7BG350600
rosa_wichuraiana	Rw4G033250 Rw6G036260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	687
Acc36I	ACCTGC	1 cut(s)	687
AccII	CGCG	1 cut(s)	648
AciI	CCGC	3 cut(s)	524, 646, 666
AcoI	YGGCCR	1 cut(s)	441
AcsI	RAATTY	1 cut(s)	383
AcuI	CTGAAG	3 cut(s)	292, 593, 672
AfaI	GTAC	1 cut(s)	293
AfiI	CCNNNNNNNGG	4 cut(s)	73, 386, 526, 549
AflII	CTTAAG	1 cut(s)	638
AgsI	TTSAA	3 cut(s)	322, 364, 547
AhlI	ACTAGT	1 cut(s)	47
AjuI	GAANNNNNNNTTGG	2 cut(s)	645, 677
AluBI	AGCT	2 cut(s)	259, 533
AluI	AGCT	2 cut(s)	259, 533
Alw21I	GWGCWC	1 cut(s)	465
Alw44I	GTGCAC	1 cut(s)	461
Ama87I	CYCGRG	1 cut(s)	492
AoxI	GGCC	3 cut(s)	250, 441, 540
ApaLI	GTGCAC	1 cut(s)	461
ApeKI	GCWGC	3 cut(s)	240, 243, 530
ApoI	RAATTY	1 cut(s)	383
AspLEI	GCGC	2 cut(s)	240, 650
AspS9I	GGNCC	3 cut(s)	185, 377, 496
AsuC2I	CCSGG	2 cut(s)	414, 521
AsuHPI	GGTGA	1 cut(s)	19
AvaI	CYCGRG	1 cut(s)	492
AvaII	GGWCC	3 cut(s)	185, 377, 496
BaeGI	GKGCMC	2 cut(s)	414, 465
BbsI	GAAGAC	1 cut(s)	627
Bbv12I	GWGCWC	1 cut(s)	465
BbvCI	CCTCAGC	1 cut(s)	509
BbvI	GCAGC	3 cut(s)	252, 255, 542
BccI	CCATC	3 cut(s)	32, 212, 274
BceAI	ACGGC	2 cut(s)	101, 392
BcgI	CGANNNNNNTGC	4 cut(s)	229, 263, 519, 553
BciVI	GTATCC	1 cut(s)	488
BcnI	CCSGG	2 cut(s)	414, 521
BcuI	ACTAGT	1 cut(s)	47
BfaI	CTAG	2 cut(s)	48, 122
BfrI	CTTAAG	1 cut(s)	638
BfuAI	ACCTGC	1 cut(s)	687
BfuI	GTATCC	1 cut(s)	488
BglII	AGATCT	1 cut(s)	558
BisI	GCNGC	3 cut(s)	241, 244, 531
BlsI	GCNGC	3 cut(s)	242, 245, 532
Bme1390I	CCNGG	2 cut(s)	414, 521
Bme18I	GGWCC	3 cut(s)	185, 377, 496
BmeT110I	CYCGRG	1 cut(s)	492
BmgT120I	GGNCC	3 cut(s)	185, 377, 496
BmiI	GGNNCC	3 cut(s)	187, 497, 498
BmrFI	CCNGG	2 cut(s)	414, 521
BmsI	GCATC	1 cut(s)	211
BpiI	GAAGAC	1 cut(s)	627
BplI	GAGNNNNNCTC	2 cut(s)	279, 311
BpmI	CTGGAG	1 cut(s)	239
Bpu10I	CCTNAGC	1 cut(s)	509
BpuMI	CCSGG	2 cut(s)	414, 521
BsaJI	CCNNGG	2 cut(s)	247, 519
Bsc4I	CCNNNNNNNGG	4 cut(s)	73, 386, 526, 549
Bse1I	ACTGG	1 cut(s)	488
BseDI	CCNNGG	2 cut(s)	247, 519
BseGI	GGATG	1 cut(s)	226
BseLI	CCNNNNNNNGG	4 cut(s)	73, 386, 526, 549
BseMII	CTCAG	1 cut(s)	523
BseNI	ACTGG	1 cut(s)	488
BseSI	GKGCMC	2 cut(s)	414, 465
BseXI	GCAGC	3 cut(s)	252, 255, 542
BsgI	GTGCAG	1 cut(s)	92
Bsh1236I	CGCG	1 cut(s)	648
BshFI	GGCC	3 cut(s)	252, 443, 542
BsiHKAI	GWGCWC	1 cut(s)	465
BsiHKCI	CYCGRG	1 cut(s)	492
BsiSI	CCGG	3 cut(s)	414, 440, 521
BslFI	GGGAC	3 cut(s)	247, 482, 628
BslI	CCNNNNNNNGG	4 cut(s)	73, 386, 526, 549
BsmFI	GGGAC	3 cut(s)	247, 482, 628
BsmI	GAATGC	1 cut(s)	347
BsnI	GGCC	3 cut(s)	252, 443, 542
BsoBI	CYCGRG	1 cut(s)	492
Bsp1286I	GDGCHC	2 cut(s)	414, 465
Bsp143I	GATC	2 cut(s)	132, 558
BspACI	CCGC	3 cut(s)	524, 646, 666
BspANI	GGCC	3 cut(s)	252, 443, 542
BspCNI	CTCAG	1 cut(s)	522
BspFNI	CGCG	1 cut(s)	648
BspHI	TCATGA	1 cut(s)	109
BspLI	GGNNCC	3 cut(s)	187, 497, 498
BspMI	ACCTGC	1 cut(s)	687
BspTI	CTTAAG	1 cut(s)	638
BsrI	ACTGG	1 cut(s)	488
BssECI	CCNNGG	2 cut(s)	247, 519
BssMI	GATC	2 cut(s)	132, 558
Bst4CI	ACNGT	1 cut(s)	428
Bst6I	CTCTTC	2 cut(s)	311, 472
BstAFI	CTTAAG	1 cut(s)	638
BstAPI	GCANNNNNTGC	1 cut(s)	460
BstC8I	GCNNGC	1 cut(s)	535
BstDEI	CTNAG	2 cut(s)	509, 570
BstENI	CCTNNNNNAGG	1 cut(s)	547
BstF5I	GGATG	1 cut(s)	226
BstFNI	CGCG	1 cut(s)	648
BstHHI	GCGC	2 cut(s)	240, 650
BstKTI	GATC	2 cut(s)	135, 561
BstMBI	GATC	2 cut(s)	132, 558
BstMWI	GCNNNNNNNGC	6 cut(s)	230, 249, 460, 530, 539, 585
BstNSI	RCATGY	1 cut(s)	233
BstSCI	CCNGG	2 cut(s)	412, 519
BstSLI	GKGCMC	2 cut(s)	414, 465
BstUI	CGCG	1 cut(s)	648
BstV1I	GCAGC	3 cut(s)	252, 255, 542
BstV2I	GAAGAC	1 cut(s)	627
BstX2I	RGATCY	1 cut(s)	558
BstYI	RGATCY	1 cut(s)	558
BsuI	GTATCC	1 cut(s)	488
BsuRI	GGCC	3 cut(s)	252, 443, 542
BtsCI	GGATG	1 cut(s)	226
BtsIMutI	CAGTG	1 cut(s)	481
BveI	ACCTGC	1 cut(s)	687
Cac8I	GCNNGC	1 cut(s)	535
CciI	TCATGA	1 cut(s)	109
CfoI	GCGC	2 cut(s)	240, 650
Cfr13I	GGNCC	3 cut(s)	185, 377, 496
CseI	GACGC	1 cut(s)	605
Csp6I	GTAC	1 cut(s)	292
CviAII	CATG	5 cut(s)	25, 110, 154, 217, 230
CviQI	GTAC	1 cut(s)	292
DdeI	CTNAG	2 cut(s)	509, 570
DpnI	GATC	2 cut(s)	134, 560
DpnII	GATC	2 cut(s)	132, 558
EaeI	YGGCCR	1 cut(s)	441
Eam1104I	CTCTTC	2 cut(s)	311, 472
EarI	CTCTTC	2 cut(s)	311, 472
EciI	GGCGGA	2 cut(s)	539, 681
Eco47I	GGWCC	3 cut(s)	185, 377, 496
Eco57I	CTGAAG	3 cut(s)	292, 593, 672
Eco88I	CYCGRG	1 cut(s)	492
EcoNI	CCTNNNNNAGG	1 cut(s)	547
EcoO109I	RGGNCCY	2 cut(s)	377, 496
FaeI	CATG	5 cut(s)	28, 113, 157, 220, 233
FaiI	YATR	9 cut(s)	26, 111, 146, 155, 218, 227, 231, 335, 601
FaqI	GGGAC	3 cut(s)	247, 482, 628
FatI	CATG	5 cut(s)	24, 109, 153, 216, 229
FauI	CCCGC	1 cut(s)	653
Fnu4HI	GCNGC	3 cut(s)	241, 244, 531
FokI	GGATG	1 cut(s)	233
Fsp4HI	GCNGC	3 cut(s)	241, 244, 531
FspBI	CTAG	2 cut(s)	48, 122
GlaI	GCGC	2 cut(s)	239, 649
GluI	GCNGC	3 cut(s)	241, 244, 531
GsuI	CTGGAG	1 cut(s)	239
HaeIII	GGCC	3 cut(s)	252, 443, 542
HapII	CCGG	3 cut(s)	414, 440, 521
HgaI	GACGC	1 cut(s)	605
HhaI	GCGC	2 cut(s)	240, 650
Hin1II	CATG	5 cut(s)	28, 113, 157, 220, 233
Hin6I	GCGC	2 cut(s)	238, 648
HinP1I	GCGC	2 cut(s)	238, 648
HpaII	CCGG	3 cut(s)	414, 440, 521
HphI	GGTGA	1 cut(s)	19
Hpy166II	GTNNAC	3 cut(s)	10, 292, 463
Hpy188I	TCNGA	1 cut(s)	287
Hpy188III	TCNNGA	4 cut(s)	110, 183, 380, 617
Hpy8I	GTNNAC	3 cut(s)	10, 292, 463
HpyCH4III	ACNGT	1 cut(s)	428
HpyCH4V	TGCA	5 cut(s)	73, 95, 347, 454, 463
HpyF10VI	GCNNNNNNNGC	6 cut(s)	230, 249, 460, 530, 539, 585
HpyF3I	CTNAG	2 cut(s)	509, 570
Hsp92II	CATG	5 cut(s)	28, 113, 157, 220, 233
HspAI	GCGC	2 cut(s)	238, 648
KflI	GGGWCCC	1 cut(s)	496
Kzo9I	GATC	2 cut(s)	132, 558
Lsp1109I	GCAGC	3 cut(s)	252, 255, 542
LweI	GCATC	1 cut(s)	211
MaeI	CTAG	2 cut(s)	48, 122
MaeIII	GTNAC	2 cut(s)	336, 684
MalI	GATC	2 cut(s)	134, 560
MboI	GATC	2 cut(s)	132, 558
MboII	GAAGA	4 cut(s)	298, 459, 632, 665
MflI	RGATCY	1 cut(s)	558
MhlI	GDGCHC	2 cut(s)	414, 465
MluCI	AATT	1 cut(s)	383
MnlI	CCTC	8 cut(s)	257, 263, 305, 314, 518, 520, 591, 662
MseI	TTAA	1 cut(s)	639
MslI	CAYNNNNRTG	1 cut(s)	332
MspA1I	CMGCKG	2 cut(s)	259, 533
MspCI	CTTAAG	1 cut(s)	638
MspI	CCGG	3 cut(s)	414, 440, 521
MspR9I	CCNGG	2 cut(s)	414, 521
Mva1269I	GAATGC	1 cut(s)	347
MvnI	CGCG	1 cut(s)	648
MwoI	GCNNNNNNNGC	6 cut(s)	230, 249, 460, 530, 539, 585
NciI	CCSGG	2 cut(s)	414, 521
NdeII	GATC	2 cut(s)	132, 558
NlaIII	CATG	5 cut(s)	28, 113, 157, 220, 233
NlaIV	GGNNCC	3 cut(s)	187, 497, 498
NmeAIII	GCCGAG	2 cut(s)	228, 518
NmuCI	GTSAC	2 cut(s)	336, 684
NspI	RCATGY	1 cut(s)	233
PagI	TCATGA	1 cut(s)	109
PaqCI	CACCTGC	1 cut(s)	687
PctI	GAATGC	1 cut(s)	347
PkrI	GCNGC	3 cut(s)	242, 245, 532
PpuMI	RGGWCCY	2 cut(s)	377, 496
Psp5II	RGGWCCY	2 cut(s)	377, 496
PspN4I	GGNNCC	3 cut(s)	187, 497, 498
PspPI	GGNCC	3 cut(s)	185, 377, 496
PspPPI	RGGWCCY	2 cut(s)	377, 496
PsuI	RGATCY	1 cut(s)	558
PvuII	CAGCTG	2 cut(s)	259, 533
RsaI	GTAC	1 cut(s)	293
RsaNI	GTAC	1 cut(s)	292
RseI	CAYNNNNRTG	1 cut(s)	332
SaqAI	TTAA	1 cut(s)	639
SatI	GCNGC	3 cut(s)	241, 244, 531
Sau3AI	GATC	2 cut(s)	132, 558
Sau96I	GGNCC	3 cut(s)	185, 377, 496
ScrFI	CCNGG	2 cut(s)	414, 521
SduI	GDGCHC	2 cut(s)	414, 465
SetI	ASST	9 cut(s)	9, 197, 261, 297, 306, 379, 434, 535, 701
SfaNI	GCATC	1 cut(s)	211
SinI	GGWCC	3 cut(s)	185, 377, 496
SmiMI	CAYNNNNRTG	1 cut(s)	332
SmlI	CTYRAG	1 cut(s)	638
SmoI	CTYRAG	1 cut(s)	638
SpeI	ACTAGT	1 cut(s)	47
Sse9I	AATT	1 cut(s)	383
SsiI	CCGC	3 cut(s)	524, 646, 666
SspI	AATATT	2 cut(s)	84, 129
SspMI	CTAG	2 cut(s)	48, 122
StyD4I	CCNGG	2 cut(s)	412, 519
TaaI	ACNGT	1 cut(s)	428
TaqII	GACCGA	1 cut(s)	382
TasI	AATT	1 cut(s)	383
Tru1I	TTAA	1 cut(s)	639
Tru9I	TTAA	1 cut(s)	639
TscAI	CASTG	1 cut(s)	488
TseFI	GTSAC	2 cut(s)	336, 684
TseI	GCWGC	3 cut(s)	240, 243, 530
Tsp45I	GTSAC	2 cut(s)	336, 684
TspDTI	ATGAA	4 cut(s)	41, 98, 126, 618
TspRI	CASTG	1 cut(s)	488
Vha464I	CTTAAG	1 cut(s)	638
VneI	GTGCAC	1 cut(s)	461
VpaK11BI	GGWCC	3 cut(s)	185, 377, 496
XagI	CCTNNNNNAGG	1 cut(s)	547
XapI	RAATTY	1 cut(s)	383
XceI	RCATGY	1 cut(s)	233
XspI	CTAG	2 cut(s)	48, 122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.