Prupe.1G375700_v2.0.a1

Jasmonate

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
34066073 .. 34068506
2434 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G375700.1

Sequence Viewer

Length: 1161 bp
ATGAGACAGACAGACAGACAGAGAGAGATGGAGGTGATGCAAATTCTTCACATGAACAAAGGAGTTGGCGAGACTAGTTATGCTCAAAACTCCAAACTTCAGAGCAAAATAATTTCCATTACAAAGCCAATCATTCATGACGCCGTACAAGAAATCTTGCGCTCAAATAATATAGAGAGCATGGGGATAGCAGATTTGGGCTGCTCATCTGGACCCAACACCTTATTGCTCATCTCCGAGATCATAGATGTTATCATACGCACCAAAAGCTGCAGCATTGGCCTCCACCTGTCAGCAACAACAGAGCTCAGAGTGTTCCTCAATGACCTCTTCAGCAATGACTTCAACACCATTTTTATGTCACTTCCTGCATTCTACAACAAACTCAAACAAGAGAAGGGTCCTGAGCTTGGATCTTTATTCATTTCTGCCACGCCTGGTTCGTTTTATGGGCGGTTGTTTCCGGCCAGGAGTTTACATTTTGTGCACTCTTCTTCTAGCCTTCACTGGCTGTCTCAGGTCCCTCCTGGCCTCGACAGCAAGGCAGCTGGCGAAGCTTTGAACAAAGGAAAGATCTACATATCCAAGACCAGCCCACAATGCGTTTTGGACGCATATGCGCTTCAGTTTCATAAAGATTTTTCATTGTTTCTCAAGTCCCGCGCTGAAGAAATGTTTGGTGGAGGACGAATGGTGTTGTCGCTCATGGGCAGGCCATCCTATGACCCCACAACTCCAGCCAGTTGCTACCAGTGGGAGCTTTTAGCCCACGCATTGATGACCTTGGTTTCAGAGGGTCTTATTGCAGAGGAAAAGGTTGATTCCTTCGACGCTCCCTACTATGCCCCATGTGAAGAGGAATTGAGCTTGGCGCTTAAAAAAGAAGGGTCATTCTTAATGGACAGCCTGGAGGCGTTTGAAATTGATTGGGATGGCGGCGATGGGGATCAAGAATTGCATCACACATTTGACATGGTAGGTAGTGGCCAAAAAGTGGCAAAGACAATAAGAGCCGTGGTTGAGTCAATGCTCGAATCTCATTTTGGAAAAGATATAATGGATCATCTGTTTCAATGCTACGCAGAGCTCGTCAGTAATCACTTATCAAAATCTAGAACTAAATACATCAATTTGGTCCTTGTGATCGTTAAAAAGGATTGA

Protein Analysis

387

Amino Acids

43.02

Weight (kDa)

5.73

Isoelectric Point (pI)

46.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 994
AccII CGCG 1 cut(s) 663
AciI CCGC 3 cut(s) 454, 661, 936
AclWI GGATC 3 cut(s) 421, 954, 1068
AcoI YGGCCR 2 cut(s) 465, 985
AcsI RAATTY 1 cut(s) 42
AcuI CTGAAG 4 cut(s) 83, 316, 608, 687
AcyI GRCGYC 1 cut(s) 141
AfaI GTAC 1 cut(s) 147
AfiI CCNNNNNNNGG 2 cut(s) 410, 994
AgsI TTSAA 4 cut(s) 346, 562, 920, 1073
AhlI ACTAGT 1 cut(s) 74
AjnI CCWGG 4 cut(s) 436, 467, 526, 906
AjuI GAANNNNNNNTTGG 4 cut(s) 660, 692, 1026, 1058
AluBI AGCT 8 cut(s) 270, 307, 409, 548, 557, 760, 867, 1087
AluI AGCT 8 cut(s) 270, 307, 409, 548, 557, 760, 867, 1087
Alw21I GWGCWC 3 cut(s) 309, 489, 1089
Alw26I GTCTC 2 cut(s) 65, 519
Alw44I GTGCAC 1 cut(s) 485
AlwI GGATC 3 cut(s) 421, 954, 1068
AoxI GGCC 5 cut(s) 280, 465, 529, 713, 985
ApaLI GTGCAC 1 cut(s) 485
ApeKI GCWGC 4 cut(s) 201, 270, 273, 545
ApoI RAATTY 1 cut(s) 42
AspLEI GCGC 4 cut(s) 162, 622, 665, 874
AspS9I GGNCC 4 cut(s) 212, 401, 520, 1135
AsuHPI GGTGA 1 cut(s) 46
AvaII GGWCC 4 cut(s) 212, 401, 520, 1135
BaeGI GKGCMC 1 cut(s) 489
BalI TGGCCA 1 cut(s) 987
BanII GRGCYC 2 cut(s) 309, 1089
Bbv12I GWGCWC 3 cut(s) 309, 489, 1089
BbvI GCAGC 4 cut(s) 188, 257, 285, 557
BccI CCATC 4 cut(s) 22, 724, 926, 935
BceAI ACGGC 2 cut(s) 128, 998
BciT130I CCWGG 4 cut(s) 438, 469, 528, 908
BcoDI GTCTC 2 cut(s) 65, 519
BcuI ACTAGT 1 cut(s) 74
BfaI CTAG 3 cut(s) 75, 498, 1113
BfmI CTRYAG 1 cut(s) 271
BfoI RGCGCY 1 cut(s) 875
BglII AGATCT 1 cut(s) 573
BisI GCNGC 5 cut(s) 202, 271, 274, 546, 937
BlsI GCNGC 5 cut(s) 203, 272, 275, 547, 938
Bme1390I CCNGG 4 cut(s) 438, 469, 528, 908
Bme18I GGWCC 4 cut(s) 212, 401, 520, 1135
BmgT120I GGNCC 4 cut(s) 212, 401, 520, 1135
BmiI GGNNCC 3 cut(s) 214, 402, 522
BmrFI CCNGG 4 cut(s) 438, 469, 528, 908
BmsI GCATC 2 cut(s) 27, 967
BplI GAGNNNNNCTC 2 cut(s) 303, 335
BpmI CTGGAG 2 cut(s) 720, 929
Bpu10I CCTNAGC 1 cut(s) 405
BpuEI CTTGAG 1 cut(s) 638
BsaBI GATNNNNATC 1 cut(s) 945
BsaHI GRCGYC 1 cut(s) 141
BsaJI CCNNGG 2 cut(s) 783, 1014
Bsc4I CCNNNNNNNGG 2 cut(s) 410, 994
Bse1I ACTGG 3 cut(s) 512, 741, 751
Bse3DI GCAATG 1 cut(s) 343
Bse8I GATNNNNATC 1 cut(s) 945
BseBI CCWGG 4 cut(s) 438, 469, 528, 908
BseDI CCNNGG 2 cut(s) 783, 1014
BseGI GGATG 2 cut(s) 716, 937
BseJI GATNNNNATC 1 cut(s) 945
BseLI CCNNNNNNNGG 2 cut(s) 410, 994
BseMI GCAATG 1 cut(s) 343
BseMII CTCAG 3 cut(s) 322, 396, 530
BseNI ACTGG 3 cut(s) 512, 741, 751
BseSI GKGCMC 1 cut(s) 489
BseXI GCAGC 4 cut(s) 188, 257, 285, 557
Bsh1236I CGCG 1 cut(s) 663
BshFI GGCC 5 cut(s) 282, 467, 531, 715, 987
BsiHKAI GWGCWC 3 cut(s) 309, 489, 1089
BsiSI CCGG 1 cut(s) 464
BslFI GGGAC 2 cut(s) 506, 643
BslI CCNNNNNNNGG 2 cut(s) 410, 994
BsmAI GTCTC 2 cut(s) 65, 519
BsmFI GGGAC 2 cut(s) 506, 643
BsmI GAATGC 1 cut(s) 371
BsnI GGCC 5 cut(s) 282, 467, 531, 715, 987
Bsp1286I GDGCHC 3 cut(s) 309, 489, 1089
Bsp143I GATC 6 cut(s) 240, 413, 573, 946, 1060, 1143
BspACI CCGC 3 cut(s) 454, 661, 936
BspANI GGCC 5 cut(s) 282, 467, 531, 715, 987
BspCNI CTCAG 3 cut(s) 321, 397, 529
BspFNI CGCG 1 cut(s) 663
BspHI TCATGA 1 cut(s) 136
BspLI GGNNCC 3 cut(s) 214, 402, 522
BspMAI CTGCAG 1 cut(s) 275
BspPI GGATC 3 cut(s) 421, 954, 1068
BsrDI GCAATG 1 cut(s) 343
BsrI ACTGG 3 cut(s) 512, 741, 751
BssECI CCNNGG 2 cut(s) 783, 1014
BssMI GATC 6 cut(s) 240, 413, 573, 946, 1060, 1143
BssNI GRCGYC 1 cut(s) 141
BssT1I CCWWGG 1 cut(s) 783
Bst2UI CCWGG 4 cut(s) 438, 469, 528, 908
Bst6I CTCTTC 3 cut(s) 335, 496, 849
BstACI GRCGYC 1 cut(s) 141
BstC8I GCNNGC 2 cut(s) 550, 713
BstDEI CTNAG 3 cut(s) 308, 405, 516
BstDSI CCRYGG 1 cut(s) 1014
BstF5I GGATG 2 cut(s) 716, 937
BstFNI CGCG 1 cut(s) 663
BstH2I RGCGCY 1 cut(s) 875
BstHHI GCGC 4 cut(s) 162, 622, 665, 874
BstKTI GATC 6 cut(s) 243, 416, 576, 949, 1063, 1146
BstMAI GTCTC 2 cut(s) 65, 519
BstMBI GATC 6 cut(s) 240, 413, 573, 946, 1060, 1143
BstMWI GCNNNNNNNGC 5 cut(s) 267, 279, 537, 554, 600
BstNI CCWGG 4 cut(s) 438, 469, 528, 908
BstSCI CCNGG 4 cut(s) 436, 467, 526, 906
BstSFI CTRYAG 1 cut(s) 271
BstSLI GKGCMC 1 cut(s) 489
BstUI CGCG 1 cut(s) 663
BstV1I GCAGC 4 cut(s) 188, 257, 285, 557
BstX2I RGATCY 2 cut(s) 413, 573
BstYI RGATCY 2 cut(s) 413, 573
BsuRI GGCC 5 cut(s) 282, 467, 531, 715, 987
BtgI CCRYGG 1 cut(s) 1014
BtgZI GCGATG 1 cut(s) 954
BtsCI GGATG 2 cut(s) 716, 937
BtsIMutI CAGTG 2 cut(s) 505, 758
Cac8I GCNNGC 2 cut(s) 550, 713
CciI TCATGA 1 cut(s) 136
CfoI GCGC 4 cut(s) 162, 622, 665, 874
Cfr13I GGNCC 4 cut(s) 212, 401, 520, 1135
CseI GACGC 3 cut(s) 149, 620, 839
Csp6I GTAC 1 cut(s) 146
CviAII CATG 6 cut(s) 52, 137, 181, 706, 849, 973
CviQI GTAC 1 cut(s) 146
DdeI CTNAG 3 cut(s) 308, 405, 516
DpnI GATC 6 cut(s) 242, 415, 575, 948, 1062, 1145
DpnII GATC 6 cut(s) 240, 413, 573, 946, 1060, 1143
EaeI YGGCCR 2 cut(s) 465, 985
Eam1104I CTCTTC 3 cut(s) 335, 496, 849
EarI CTCTTC 3 cut(s) 335, 496, 849
Ecl136II GAGCTC 2 cut(s) 307, 1087
Eco130I CCWWGG 1 cut(s) 783
Eco24I GRGCYC 2 cut(s) 309, 1089
Eco47I GGWCC 4 cut(s) 212, 401, 520, 1135
Eco53kI GAGCTC 2 cut(s) 307, 1087
Eco57I CTGAAG 4 cut(s) 83, 316, 608, 687
EcoICRI GAGCTC 2 cut(s) 307, 1087
EcoO109I RGGNCCY 2 cut(s) 401, 520
EcoRII CCWGG 4 cut(s) 436, 467, 526, 906
EcoT14I CCWWGG 1 cut(s) 783
EcoT38I GRGCYC 2 cut(s) 309, 1089
ErhI CCWWGG 1 cut(s) 783
FaeI CATG 6 cut(s) 55, 140, 184, 709, 852, 976
FaqI GGGAC 2 cut(s) 506, 643
FatI CATG 6 cut(s) 51, 136, 180, 705, 848, 972
FauI CCCGC 1 cut(s) 668
FauNDI CATATG 1 cut(s) 616
Fnu4HI GCNGC 5 cut(s) 202, 271, 274, 546, 937
FokI GGATG 2 cut(s) 703, 944
FriOI GRGCYC 2 cut(s) 309, 1089
Fsp4HI GCNGC 5 cut(s) 202, 271, 274, 546, 937
FspBI CTAG 3 cut(s) 75, 498, 1113
GlaI GCGC 4 cut(s) 161, 621, 664, 873
GluI GCNGC 5 cut(s) 202, 271, 274, 546, 937
GsuI CTGGAG 2 cut(s) 720, 929
HaeII RGCGCY 1 cut(s) 875
HaeIII GGCC 5 cut(s) 282, 467, 531, 715, 987
HapII CCGG 1 cut(s) 464
HgaI GACGC 3 cut(s) 149, 620, 839
HhaI GCGC 4 cut(s) 162, 622, 665, 874
Hin1I GRCGYC 1 cut(s) 141
Hin1II CATG 6 cut(s) 55, 140, 184, 709, 852, 976
Hin6I GCGC 4 cut(s) 160, 620, 663, 872
HinP1I GCGC 4 cut(s) 160, 620, 663, 872
HindIII AAGCTT 1 cut(s) 555
HinfI GANTC 3 cut(s) 821, 1022, 1034
HpaII CCGG 1 cut(s) 464
HphI GGTGA 1 cut(s) 46
Hpy166II GTNNAC 2 cut(s) 476, 487
Hpy188I TCNGA 4 cut(s) 102, 238, 311, 793
Hpy188III TCNNGA 5 cut(s) 137, 210, 404, 950, 1113
Hpy8I GTNNAC 2 cut(s) 476, 487
Hpy99I CGWCG 1 cut(s) 833
HpyAV CCTTC 4 cut(s) 391, 512, 835, 878
HpyCH4V TGCA 6 cut(s) 40, 273, 371, 487, 806, 958
HpyF10VI GCNNNNNNNGC 5 cut(s) 267, 279, 537, 554, 600
HpyF3I CTNAG 3 cut(s) 308, 405, 516
Hsp92I GRCGYC 1 cut(s) 141
Hsp92II CATG 6 cut(s) 55, 140, 184, 709, 852, 976
HspAI GCGC 4 cut(s) 160, 620, 663, 872
Kzo9I GATC 6 cut(s) 240, 413, 573, 946, 1060, 1143
LmnI GCTCC 2 cut(s) 757, 838
Lsp1109I GCAGC 4 cut(s) 188, 257, 285, 557
LweI GCATC 2 cut(s) 27, 967
MaeI CTAG 3 cut(s) 75, 498, 1113
MaeIII GTNAC 1 cut(s) 360
MalI GATC 6 cut(s) 242, 415, 575, 948, 1062, 1145
MboI GATC 6 cut(s) 240, 413, 573, 946, 1060, 1143
MboII GAAGA 6 cut(s) 38, 322, 483, 486, 680, 866
MflI RGATCY 2 cut(s) 413, 573
MhlI GDGCHC 3 cut(s) 309, 489, 1089
MlsI TGGCCA 1 cut(s) 987
MluCI AATT 6 cut(s) 42, 111, 860, 921, 953, 1129
MluNI TGGCCA 1 cut(s) 987
MlyI GAGTC 1 cut(s) 1031
Mox20I TGGCCA 1 cut(s) 987
MscI TGGCCA 1 cut(s) 987
MseI TTAA 3 cut(s) 876, 896, 1149
MslI CAYNNNNRTG 1 cut(s) 356
Msp20I TGGCCA 1 cut(s) 987
MspA1I CMGCKG 1 cut(s) 548
MspI CCGG 1 cut(s) 464
MspR9I CCNGG 4 cut(s) 438, 469, 528, 908
Mva1269I GAATGC 1 cut(s) 371
MvaI CCWGG 4 cut(s) 438, 469, 528, 908
MvnI CGCG 1 cut(s) 663
MwoI GCNNNNNNNGC 5 cut(s) 267, 279, 537, 554, 600
NdeI CATATG 1 cut(s) 616
NdeII GATC 6 cut(s) 240, 413, 573, 946, 1060, 1143
NlaIII CATG 6 cut(s) 55, 140, 184, 709, 852, 976
NlaIV GGNNCC 3 cut(s) 214, 402, 522
NmuCI GTSAC 1 cut(s) 360
PagI TCATGA 1 cut(s) 136
PcsI WCGNNNNNNNCGW 2 cut(s) 440, 1086
PctI GAATGC 1 cut(s) 371
PfeI GAWTC 2 cut(s) 821, 1034
PflMI CCANNNNNTGG 1 cut(s) 994
PkrI GCNGC 5 cut(s) 203, 272, 275, 547, 938
PleI GAGTC 1 cut(s) 1030
PpsI GAGTC 1 cut(s) 1030
PpuMI RGGWCCY 2 cut(s) 401, 520
Psp124BI GAGCTC 2 cut(s) 309, 1089
Psp5II RGGWCCY 2 cut(s) 401, 520
Psp6I CCWGG 4 cut(s) 436, 467, 526, 906
PspGI CCWGG 4 cut(s) 436, 467, 526, 906
PspN4I GGNNCC 3 cut(s) 214, 402, 522
PspPI GGNCC 4 cut(s) 212, 401, 520, 1135
PspPPI RGGWCCY 2 cut(s) 401, 520
PstI CTGCAG 1 cut(s) 275
PsuI RGATCY 2 cut(s) 413, 573
PvuII CAGCTG 1 cut(s) 548
RsaI GTAC 1 cut(s) 147
RsaNI GTAC 1 cut(s) 146
RseI CAYNNNNRTG 1 cut(s) 356
SacI GAGCTC 2 cut(s) 309, 1089
SaqAI TTAA 3 cut(s) 876, 896, 1149
SatI GCNGC 5 cut(s) 202, 271, 274, 546, 937
Sau3AI GATC 6 cut(s) 240, 413, 573, 946, 1060, 1143
Sau96I GGNCC 4 cut(s) 212, 401, 520, 1135
SchI GAGTC 1 cut(s) 1031
ScrFI CCNGG 4 cut(s) 438, 469, 528, 908
SduI GDGCHC 3 cut(s) 309, 489, 1089
SfaNI GCATC 2 cut(s) 27, 967
SfcI CTRYAG 1 cut(s) 271
SinI GGWCC 4 cut(s) 212, 401, 520, 1135
SmiMI CAYNNNNRTG 1 cut(s) 356
SmlI CTYRAG 1 cut(s) 653
SmoI CTYRAG 1 cut(s) 653
SpeI ACTAGT 1 cut(s) 74
Sse9I AATT 6 cut(s) 42, 111, 860, 921, 953, 1129
SsiI CCGC 3 cut(s) 454, 661, 936
SspMI CTAG 3 cut(s) 75, 498, 1113
SstI GAGCTC 2 cut(s) 309, 1089
StyD4I CCNGG 4 cut(s) 436, 467, 526, 906
StyI CCWWGG 1 cut(s) 783
TaqI TCGA 3 cut(s) 534, 828, 1032
TasI AATT 6 cut(s) 42, 111, 860, 921, 953, 1129
TauI GCSGC 1 cut(s) 939
TfiI GAWTC 2 cut(s) 821, 1034
Tru1I TTAA 3 cut(s) 876, 896, 1149
Tru9I TTAA 3 cut(s) 876, 896, 1149
TscAI CASTG 2 cut(s) 512, 758
TseFI GTSAC 1 cut(s) 360
TseI GCWGC 4 cut(s) 201, 270, 273, 545
Tsp45I GTSAC 1 cut(s) 360
TspDTI ATGAA 5 cut(s) 68, 125, 412, 620, 633
TspRI CASTG 2 cut(s) 512, 758
Van91I CCANNNNNTGG 1 cut(s) 994
VneI GTGCAC 1 cut(s) 485
VpaK11BI GGWCC 4 cut(s) 212, 401, 520, 1135
XapI RAATTY 1 cut(s) 42
XbaI TCTAGA 1 cut(s) 1112
XspI CTAG 3 cut(s) 75, 498, 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.