Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001051

Physical Location & Seq

Genomic Coordinates Reverse (-)

45670039 .. 45671661

Gene Structure 1623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0305500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGGCTAGAGAACAATTACAGGTGCTCAACGCACTTGATGTTGCGAAAACACAATGGTACCATTTCACTGCAATTATCATTGCTGGAATGGGATTCTTCACAGATGCATATGATCTCTTCTGCGTATCCCTTGTCACCAAATTGCTTGGCCGCATATACTACCATGTTGAAGGTGCTAAAAAACCTGGGACATTGCCTCCCAATGTCTCTGCTGCGGTGAATGGTGTAGCCTTCTGTGGAACATTAGCCGGCCAACTCTTCTTTGGCTGGCTCGGTGACAAAATGGGAAGGAAGAAAGTGTATGGCATGACTCTTATGCTCATGGTCATATGTTCTATTGGTTCAGGTCTCTCTTTTGGGCACGACCCCAAGACTGTGATATCTACTCTTTGCTTCTTTCGGTTCTGGCTTGGTTTCGGTATTGGTGGTGACTACCCTCTTTCGGCCACCATCATGTCTGAGTATGCTAACAAGAAGACTCGCGGCGCCTTCATTGCTGCGGTGTTTGCCATGCAAGGGTTTGGAATTTTGGCTGGTGGGATATTTGCAATCATTTCTGCATCTGCGTTTAAAGCCAAGTTTGATGCTCCAGCATATGAGGTCAGTGGAGATGCCTCAACTGTTCCACAAGCAGACTATCTCTGGCGACTTATTGTGATGGTAGGGGCAATCCCGGCTGCAATGACTTACTACTGGCGAATGAAGATGCCTGAGACTGCTCGTTACACTGCCCTTGTTGCCAAGAATGCAAAGCAGGCTGCATCAGACATGTCAAGAGTTCTGCAGGTTGAGATTGAAGCTGAAACAGCAAAGGTTGAGGATCAGAAGTCGACTAATGCCTTTGCTCTGTTCTCTAAGGAGTTTATGCGCCGCCACGGACTTCACTTGCTTGGAACAACAAGCACATGGTTCTTGCTTGACATTGCATTCTACAGCCAAAATCTGTTCCAAAAGGATATCTTCAGCGCGATTGGATGGATTCCCGCTGCTGAGACTATGAATGCTATCGAGGAGGTTTACAAAATTGCAAGAGCTCAGACGCTTATTGCTATGTGCAGTACTGTCCCAGGCTACTGGTTTACAGTTGCTTTCATCGACAGGATTGGAAGGTTTGCGATTCAATTGATGGGATTCTTCTTCATGACAGTATTTATGTTTGCACTGGCCATTCCCTATGACCACTGGACTCACAAGGATAACCGGATTGGATTTGTGGTGATGTACTCATTGACATTCTTCTTCGCCAACTTTGGTCCCAACGCCACCACATTTGTTGTGCCGGCTGAGATTTTCCCTGCTAGGTTCCGGTCTACATGTCACGGAATCTCAGCAGCAGCAGGGAAGCTCGGTGCTATAATTGGTGCATTTGGATTCTTGTATTTGGCTCAGAACCAGGACAAGGCAAAGGTTGATGCAGGGTACCCTACTGGCATTGGAGTGAAAAACTCACTCATTGTGTTGGGTGTTGTTAACTTTTTAGGGATATTGTTCACTTTCTTGGTGCCTGAATCGAATGGCAAGTCATTGGAGGAGATGTCAGGCGAGAATGAAGAGGAACCGGAATCTGCGTTGGAGTTGGAGCAGCAATCAGGTTATGGCAACAACAGGACAGTTCCAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006950 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009611 GO:0009694 GO:0009987 GO:0010817 GO:0016740 GO:0016741 GO:0019752 GO:0030795 GO:0032259 GO:0032787 GO:0042445 GO:0043436 GO:0044237 GO:0044281 GO:0044424 GO:0044464 GO:0050896 GO:0065007 GO:0065008 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00592 ko01110 map00592 map01110

Pfam Domains

Protein Families

Methyltransf_7

Protein Analysis

540

Amino Acids

59.36

Weight (kDa)

8.06

Isoelectric Point (pI)

31.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	26 - 513	4.9e-50	Sugar (and other) transporter
MFS_1	PF07690	66 - 455	1.6e-22	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19640
fragaria_vesca	FvH4_2g39441 FvH4_2g39441 FvH4_2g39450 FvH4_4g32530 FvH4_4g32530 FvH4_4g32530 FvH4_4g32960
malus_domestica	MD08G1027000.v1.1 MD08G1027100.v1.1 MD08G1027300.v1.1 MD15G1023600.v1.1 MD15G1023700.v1.1
prunus_persica	Prupe.1G375700_v2.0.a1 Prupe.1G375800_v2.0.a1
pyrus_communis	pycom08g02110 pycom15g01960 pycom15g01970 pycom15g02010
rosa_chinensis	RchiOBHm_Chr4g0441411 RchiOBHm_Chr6g0301501 RchiOBHm_Chr6g0301511 RchiOBHm_Chr6g0301521
rosa_laevigata	RLG00000006093 RLG00000006094 RLG00000011247 RLG00000011248
rosa_multiflora	Rmu_co8385149.1_g000001 Rmu_co8452201.1_g000002 Rmu_sc0004253.1_g000002 Rmu_sc0034371.1_g000001 Rmu_sc0038282.1_g000002 Rmu_ssc0000452.1_g000002
rosa_roxburghii	Rroxscaffold_3G00235790 Rroxscaffold_5G00382280 Rroxscaffold_7G00166690 Rroxscaffold_7G00166700
rosa_rugosa	Rorug04G0333100 Rorug04G0333300 Rorug04G0333400 Rorug06G0305400 Rorug06G0305500 Rorug06G0305600 Rorug06G0305700 Rorug07G0216800 Rorug07G0217000
rosa_samantha	Rh4AG385100 Rh4BG399100 Rh4BG399200 Rh4CG414200 Rh4CG414300 Rh4DG391800 Rh6AG419400 Rh6BG425300 Rh6CG432500 Rh6DG418500 Rh6DG418600 Rh7BG350600
rosa_wichuraiana	Rw4G033250 Rw6G036260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	775
Acc65I	GGTACC	2 cut(s)	57, 1419
AccB1I	GGYRCC	4 cut(s)	57, 485, 1419, 1501
AccI	GTMKAC	2 cut(s)	830, 1310
AccII	CGCG	2 cut(s)	483, 968
AciI	CCGC	6 cut(s)	151, 215, 483, 500, 871, 984
AclWI	GGATC	1 cut(s)	828
AcoI	YGGCCR	4 cut(s)	148, 250, 444, 1164
AcsI	RAATTY	1 cut(s)	525
AcuI	CTGAAG	1 cut(s)	946
AcyI	GRCGYC	1 cut(s)	486
AfaI	GTAC	4 cut(s)	59, 1060, 1223, 1421
AfiI	CCNNNNNNNGG	3 cut(s)	442, 516, 1399
AflIII	ACRYGT	2 cut(s)	768, 1313
AgsI	TTSAA	3 cut(s)	170, 797, 1121
AjnI	CCWGG	3 cut(s)	184, 1066, 1392
AluBI	AGCT	3 cut(s)	800, 1034, 1345
AluI	AGCT	3 cut(s)	800, 1034, 1345
Alw21I	GWGCWC	2 cut(s)	27, 1036
Alw26I	GTCTC	4 cut(s)	211, 353, 707, 986
AlwI	GGATC	1 cut(s)	828
AoxI	GGCC	4 cut(s)	148, 250, 444, 1164
ApeKI	GCWGC	8 cut(s)	212, 497, 677, 758, 986, 1331, 1334, 1582
ApoI	RAATTY	1 cut(s)	525
ArsI	GACNNNNNNTTYG	2 cut(s)	1505, 1537
Asp718I	GGTACC	2 cut(s)	57, 1419
AspLEI	GCGC	3 cut(s)	488, 870, 968
AspS9I	GGNCC	1 cut(s)	1253
AsuC2I	CCSGG	1 cut(s)	674
AsuHPI	GGTGA	5 cut(s)	127, 229, 287, 440, 1228
AvaII	GGWCC	1 cut(s)	1253
BaeGI	GKGCMC	1 cut(s)	363
BaeI	ACNNNNGTAYC	2 cut(s)	41, 74
BalI	TGGCCA	1 cut(s)	1166
BanI	GGYRCC	4 cut(s)	57, 485, 1419, 1501
BanII	GRGCYC	1 cut(s)	1036
BbsI	GAAGAC	1 cut(s)	482
Bbv12I	GWGCWC	2 cut(s)	27, 1036
BbvI	GCAGC	8 cut(s)	199, 484, 664, 745, 973, 1343, 1346, 1594
BccI	CCATC	4 cut(s)	458, 652, 969, 1120
BciT130I	CCWGG	3 cut(s)	186, 1068, 1394
BciVI	GTATCC	1 cut(s)	136
BcnI	CCSGG	1 cut(s)	674
BcoDI	GTCTC	4 cut(s)	211, 353, 707, 986
BfaI	CTAG	2 cut(s)	6, 1299
BfmI	CTRYAG	2 cut(s)	782, 931
BfoI	RGCGCY	1 cut(s)	489
BfuAI	ACCTGC	1 cut(s)	775
BfuI	GTATCC	1 cut(s)	136
BmcAI	AGTACT	1 cut(s)	1060
Bme1390I	CCNGG	4 cut(s)	186, 674, 1068, 1394
Bme18I	GGWCC	1 cut(s)	1253
BmgT120I	GGNCC	1 cut(s)	1253
BmiI	GGNNCC	7 cut(s)	59, 487, 1255, 1304, 1421, 1503, 1557
BmrFI	CCNGG	4 cut(s)	186, 674, 1068, 1394
BmsI	GCATC	7 cut(s)	94, 569, 574, 601, 696, 770, 1402
BpiI	GAAGAC	1 cut(s)	482
BpmI	CTGGAG	1 cut(s)	573
BpuMI	CCSGG	1 cut(s)	674
BsaHI	GRCGYC	1 cut(s)	486
BsaI	GGTCTC	1 cut(s)	353
BsaJI	CCNNGG	3 cut(s)	185, 874, 1066
BsaWI	WCCGGW	3 cut(s)	1200, 1305, 1558
BsaXI	ACNNNNNCTCC	4 cut(s)	181, 211, 1520, 1550
Bsc4I	CCNNNNNNNGG	3 cut(s)	442, 516, 1399
Bse118I	RCCGGY	2 cut(s)	248, 1279
Bse1I	ACTGG	6 cut(s)	698, 1079, 1167, 1187, 1432, 1616
Bse3DI	GCAATG	5 cut(s)	78, 191, 492, 687, 921
BseBI	CCWGG	3 cut(s)	186, 1068, 1394
BseDI	CCNNGG	3 cut(s)	185, 874, 1066
BseGI	GGATG	1 cut(s)	980
BseLI	CCNNNNNNNGG	3 cut(s)	442, 516, 1399
BseMI	GCAATG	5 cut(s)	78, 191, 492, 687, 921
BseMII	CTCAG	7 cut(s)	450, 702, 981, 1049, 1275, 1341, 1400
BseNI	ACTGG	6 cut(s)	698, 1079, 1167, 1187, 1432, 1616
BseRI	GAGGAG	2 cut(s)	1025, 1544
BseSI	GKGCMC	1 cut(s)	363
BseXI	GCAGC	8 cut(s)	199, 484, 664, 745, 973, 1343, 1346, 1594
BsgI	GTGCAG	1 cut(s)	1075
Bsh1236I	CGCG	2 cut(s)	483, 968
BshFI	GGCC	4 cut(s)	150, 252, 446, 1166
BshNI	GGYRCC	4 cut(s)	57, 485, 1419, 1501
BsiHKAI	GWGCWC	2 cut(s)	27, 1036
BsiSI	CCGG	6 cut(s)	249, 674, 1201, 1280, 1306, 1559
BslFI	GGGAC	3 cut(s)	202, 1049, 1239
BslI	CCNNNNNNNGG	3 cut(s)	442, 516, 1399
BsmAI	GTCTC	4 cut(s)	211, 353, 707, 986
BsmFI	GGGAC	3 cut(s)	202, 1049, 1239
BsmI	GAATGC	3 cut(s)	751, 926, 1006
BsnI	GGCC	4 cut(s)	150, 252, 446, 1166
Bso31I	GGTCTC	1 cut(s)	353
Bsp1286I	GDGCHC	3 cut(s)	27, 363, 1036
Bsp143I	GATC	2 cut(s)	112, 820
BspACI	CCGC	6 cut(s)	151, 215, 483, 500, 871, 984
BspANI	GGCC	4 cut(s)	150, 252, 446, 1166
BspCNI	CTCAG	7 cut(s)	451, 703, 982, 1048, 1276, 1340, 1399
BspFNI	CGCG	2 cut(s)	483, 968
BspHI	TCATGA	1 cut(s)	1140
BspLI	GGNNCC	7 cut(s)	59, 487, 1255, 1304, 1421, 1503, 1557
BspMAI	CTGCAG	1 cut(s)	786
BspMI	ACCTGC	1 cut(s)	775
BspPI	GGATC	1 cut(s)	828
BspT107I	GGYRCC	4 cut(s)	57, 485, 1419, 1501
BspTNI	GGTCTC	1 cut(s)	353
BsrDI	GCAATG	5 cut(s)	78, 191, 492, 687, 921
BsrFI	RCCGGY	2 cut(s)	248, 1279
BsrI	ACTGG	6 cut(s)	698, 1079, 1167, 1187, 1432, 1616
BssAI	RCCGGY	2 cut(s)	248, 1279
BssECI	CCNNGG	3 cut(s)	185, 874, 1066
BssMI	GATC	2 cut(s)	112, 820
BssNI	GRCGYC	1 cut(s)	486
Bst2UI	CCWGG	3 cut(s)	186, 1068, 1394
Bst4CI	ACNGT	6 cut(s)	376, 622, 1063, 1084, 1147, 1612
Bst6I	CTCTTC	3 cut(s)	122, 263, 1545
BstACI	GRCGYC	1 cut(s)	486
BstC8I	GCNNGC	4 cut(s)	250, 269, 756, 1281
BstDEI	CTNAG	8 cut(s)	459, 711, 855, 990, 1035, 1284, 1327, 1386
BstDSI	CCRYGG	1 cut(s)	874
BstF5I	GGATG	1 cut(s)	980
BstFNI	CGCG	2 cut(s)	483, 968
BstH2I	RGCGCY	1 cut(s)	489
BstHHI	GCGC	3 cut(s)	488, 870, 968
BstKTI	GATC	2 cut(s)	115, 823
BstMAI	GTCTC	4 cut(s)	211, 353, 707, 986
BstMBI	GATC	2 cut(s)	112, 820
BstMWI	GCNNNNNNNGC	8 cut(s)	494, 506, 572, 674, 737, 746, 755, 806
BstNI	CCWGG	3 cut(s)	186, 1068, 1394
BstNSI	RCATGY	2 cut(s)	772, 1317
BstSCI	CCNGG	4 cut(s)	184, 672, 1066, 1392
BstSFI	CTRYAG	2 cut(s)	782, 931
BstSLI	GKGCMC	1 cut(s)	363
BstUI	CGCG	2 cut(s)	483, 968
BstV1I	GCAGC	8 cut(s)	199, 484, 664, 745, 973, 1343, 1346, 1594
BstV2I	GAAGAC	1 cut(s)	482
BstXI	CCANNNNNNTGG	1 cut(s)	1074
BsuI	GTATCC	1 cut(s)	136
BsuRI	GGCC	4 cut(s)	150, 252, 446, 1166
BtgI	CCRYGG	1 cut(s)	874
BtsCI	GGATG	1 cut(s)	980
BtsI	GCAGTG	2 cut(s)	66, 726
BtsIMutI	CAGTG	5 cut(s)	66, 610, 726, 1160, 1180
BveI	ACCTGC	1 cut(s)	775
Cac8I	GCNNGC	4 cut(s)	250, 269, 756, 1281
CciI	TCATGA	1 cut(s)	1140
CfoI	GCGC	3 cut(s)	488, 870, 968
Cfr10I	RCCGGY	2 cut(s)	248, 1279
Cfr13I	GGNCC	1 cut(s)	1253
CseI	GACGC	1 cut(s)	1048
Csp6I	GTAC	4 cut(s)	58, 1059, 1222, 1420
CspCI	CAANNNNNGTGG	4 cut(s)	1252, 1255, 1287, 1290
CviAII	CATG	9 cut(s)	164, 307, 322, 454, 511, 769, 906, 1141, 1314
CviQI	GTAC	4 cut(s)	58, 1059, 1222, 1420
DdeI	CTNAG	8 cut(s)	459, 711, 855, 990, 1035, 1284, 1327, 1386
DinI	GGCGCC	1 cut(s)	487
DpnI	GATC	2 cut(s)	114, 822
DpnII	GATC	2 cut(s)	112, 820
DraI	TTTAAA	1 cut(s)	571
EaeI	YGGCCR	4 cut(s)	148, 250, 444, 1164
Eam1104I	CTCTTC	3 cut(s)	122, 263, 1545
EarI	CTCTTC	3 cut(s)	122, 263, 1545
Ecl136II	GAGCTC	1 cut(s)	1034
Eco24I	GRGCYC	1 cut(s)	1036
Eco31I	GGTCTC	1 cut(s)	353
Eco32I	GATATC	2 cut(s)	381, 958
Eco47I	GGWCC	1 cut(s)	1253
Eco53kI	GAGCTC	1 cut(s)	1034
Eco57I	CTGAAG	1 cut(s)	946
EcoICRI	GAGCTC	1 cut(s)	1034
EcoRII	CCWGG	3 cut(s)	184, 1066, 1392
EcoRV	GATATC	2 cut(s)	381, 958
EcoT22I	ATGCAT	1 cut(s)	109
EcoT38I	GRGCYC	1 cut(s)	1036
EgeI	GGCGCC	1 cut(s)	487
EheI	GGCGCC	1 cut(s)	487
FaeI	CATG	9 cut(s)	167, 310, 325, 457, 514, 772, 909, 1144, 1317
FalI	AAGNNNNNCTT	2 cut(s)	944, 976
FaqI	GGGAC	3 cut(s)	202, 1049, 1239
FatI	CATG	9 cut(s)	163, 306, 321, 453, 510, 768, 905, 1140, 1313
FauI	CCCGC	1 cut(s)	991
FauNDI	CATATG	3 cut(s)	109, 329, 595
FblI	GTMKAC	2 cut(s)	830, 1310
FokI	GGATG	1 cut(s)	987
FriOI	GRGCYC	1 cut(s)	1036
FspBI	CTAG	2 cut(s)	6, 1299
GlaI	GCGC	3 cut(s)	487, 869, 967
GsuI	CTGGAG	1 cut(s)	573
HaeII	RGCGCY	1 cut(s)	489
HaeIII	GGCC	4 cut(s)	150, 252, 446, 1166
HapII	CCGG	6 cut(s)	249, 674, 1201, 1280, 1306, 1559
HgaI	GACGC	1 cut(s)	1048
HhaI	GCGC	3 cut(s)	488, 870, 968
Hin1I	GRCGYC	1 cut(s)	486
Hin1II	CATG	9 cut(s)	167, 310, 325, 457, 514, 772, 909, 1144, 1317
Hin6I	GCGC	3 cut(s)	486, 868, 966
HinP1I	GCGC	3 cut(s)	486, 868, 966
HincII	GTYRAC	2 cut(s)	831, 1471
HindII	GTYRAC	2 cut(s)	831, 1471
HpaI	GTTAAC	1 cut(s)	1471
HpaII	CCGG	6 cut(s)	249, 674, 1201, 1280, 1306, 1559
HphI	GGTGA	5 cut(s)	127, 229, 287, 440, 1228
Hpy166II	GTNNAC	6 cut(s)	831, 1018, 1080, 1311, 1471, 1491
Hpy188I	TCNGA	5 cut(s)	460, 766, 825, 1038, 1389
Hpy188III	TCNNGA	2 cut(s)	774, 1141
Hpy8I	GTNNAC	6 cut(s)	831, 1018, 1080, 1311, 1471, 1491
HpyAV	CCTTC	5 cut(s)	164, 241, 282, 499, 1101
HpyCH4III	ACNGT	6 cut(s)	376, 622, 1063, 1084, 1147, 1612
HpyF10VI	GCNNNNNNNGC	8 cut(s)	494, 506, 572, 674, 737, 746, 755, 806
HpyF3I	CTNAG	8 cut(s)	459, 711, 855, 990, 1035, 1284, 1327, 1386
Hsp92I	GRCGYC	1 cut(s)	486
Hsp92II	CATG	9 cut(s)	167, 310, 325, 457, 514, 772, 909, 1144, 1317
HspAI	GCGC	3 cut(s)	486, 868, 966
KasI	GGCGCC	1 cut(s)	485
KpnI	GGTACC	2 cut(s)	61, 1423
KroI	GCCGGC	2 cut(s)	248, 1279
KroNI	GCCGGC	2 cut(s)	250, 1281
KspAI	GTTAAC	1 cut(s)	1471
Kzo9I	GATC	2 cut(s)	112, 820
LmnI	GCTCC	2 cut(s)	592, 1579
Lsp1109I	GCAGC	8 cut(s)	199, 484, 664, 745, 973, 1343, 1346, 1594
LweI	GCATC	7 cut(s)	94, 569, 574, 601, 696, 770, 1402
MaeI	CTAG	2 cut(s)	6, 1299
MaeIII	GTNAC	5 cut(s)	133, 275, 428, 722, 1316
MalI	GATC	2 cut(s)	114, 822
MboI	GATC	2 cut(s)	112, 820
MfeI	CAATTG	1 cut(s)	1121
MhlI	GDGCHC	3 cut(s)	27, 363, 1036
MlsI	TGGCCA	1 cut(s)	1166
MluCI	AATT	7 cut(s)	14, 72, 140, 525, 1023, 1121, 1356
MluNI	TGGCCA	1 cut(s)	1166
Mly113I	GGCGCC	1 cut(s)	486
MlyI	GAGTC	3 cut(s)	304, 472, 1180
MmeI	TCCRAC	2 cut(s)	1551, 1557
MnlI	CCTC	9 cut(s)	207, 447, 592, 625, 811, 1003, 1006, 1522, 1546
Mox20I	TGGCCA	1 cut(s)	1166
Mph1103I	ATGCAT	1 cut(s)	109
MroNI	GCCGGC	2 cut(s)	248, 1279
MscI	TGGCCA	1 cut(s)	1166
MseI	TTAA	2 cut(s)	570, 1470
MslI	CAYNNNNRTG	2 cut(s)	452, 1436
Msp20I	TGGCCA	1 cut(s)	1166
MspA1I	CMGCKG	1 cut(s)	986
MspI	CCGG	6 cut(s)	249, 674, 1201, 1280, 1306, 1559
MspR9I	CCNGG	4 cut(s)	186, 674, 1068, 1394
MunI	CAATTG	1 cut(s)	1121
Mva1269I	GAATGC	3 cut(s)	751, 926, 1006
MvaI	CCWGG	3 cut(s)	186, 1068, 1394
MvnI	CGCG	2 cut(s)	483, 968
MwoI	GCNNNNNNNGC	8 cut(s)	494, 506, 572, 674, 737, 746, 755, 806
NaeI	GCCGGC	2 cut(s)	250, 1281
NarI	GGCGCC	1 cut(s)	486
NciI	CCSGG	1 cut(s)	674
NdeI	CATATG	3 cut(s)	109, 329, 595
NdeII	GATC	2 cut(s)	112, 820
NgoMIV	GCCGGC	2 cut(s)	248, 1279
NlaIII	CATG	9 cut(s)	167, 310, 325, 457, 514, 772, 909, 1144, 1317
NlaIV	GGNNCC	7 cut(s)	59, 487, 1255, 1304, 1421, 1503, 1557
NmuCI	GTSAC	4 cut(s)	133, 275, 428, 1316
NsiI	ATGCAT	1 cut(s)	109
NspI	RCATGY	2 cut(s)	772, 1317
PagI	TCATGA	1 cut(s)	1140
PciI	ACATGT	2 cut(s)	768, 1313
PctI	GAATGC	3 cut(s)	751, 926, 1006
PdiI	GCCGGC	2 cut(s)	250, 1281
PfeI	GAWTC	8 cut(s)	93, 979, 1117, 1131, 1323, 1371, 1508, 1562
PleI	GAGTC	3 cut(s)	304, 472, 1180
PluTI	GGCGCC	1 cut(s)	489
PpsI	GAGTC	3 cut(s)	304, 472, 1180
PscI	ACATGT	2 cut(s)	768, 1313
Psp124BI	GAGCTC	1 cut(s)	1036
Psp6I	CCWGG	3 cut(s)	184, 1066, 1392
PspGI	CCWGG	3 cut(s)	184, 1066, 1392
PspN4I	GGNNCC	7 cut(s)	59, 487, 1255, 1304, 1421, 1503, 1557
PspPI	GGNCC	1 cut(s)	1253
PstI	CTGCAG	1 cut(s)	786
RsaI	GTAC	4 cut(s)	59, 1060, 1223, 1421
RsaNI	GTAC	4 cut(s)	58, 1059, 1222, 1420
RseI	CAYNNNNRTG	2 cut(s)	452, 1436
SacI	GAGCTC	1 cut(s)	1036
SalI	GTCGAC	1 cut(s)	829
SaqAI	TTAA	2 cut(s)	570, 1470
Sau3AI	GATC	2 cut(s)	112, 820
Sau96I	GGNCC	1 cut(s)	1253
ScaI	AGTACT	1 cut(s)	1060
SchI	GAGTC	3 cut(s)	304, 472, 1180
ScrFI	CCNGG	4 cut(s)	186, 674, 1068, 1394
SduI	GDGCHC	3 cut(s)	27, 363, 1036
SfaNI	GCATC	7 cut(s)	94, 569, 574, 601, 696, 770, 1402
SfcI	CTRYAG	2 cut(s)	782, 931
SfoI	GGCGCC	1 cut(s)	487
SinI	GGWCC	1 cut(s)	1253
SmiMI	CAYNNNNRTG	2 cut(s)	452, 1436
Sse9I	AATT	7 cut(s)	14, 72, 140, 525, 1023, 1121, 1356
SsiI	CCGC	6 cut(s)	151, 215, 483, 500, 871, 984
SspDI	GGCGCC	1 cut(s)	485
SspMI	CTAG	2 cut(s)	6, 1299
SstI	GAGCTC	1 cut(s)	1036
StyD4I	CCNGG	4 cut(s)	184, 672, 1066, 1392
TaaI	ACNGT	6 cut(s)	376, 622, 1063, 1084, 1147, 1612
TaqI	TCGA	4 cut(s)	830, 1008, 1095, 1511
TasI	AATT	7 cut(s)	14, 72, 140, 525, 1023, 1121, 1356
TatI	WGTACW	2 cut(s)	1058, 1221
TauI	GCSGC	3 cut(s)	153, 486, 873
TfiI	GAWTC	8 cut(s)	93, 979, 1117, 1131, 1323, 1371, 1508, 1562
Tru1I	TTAA	2 cut(s)	570, 1470
Tru9I	TTAA	2 cut(s)	570, 1470
TscAI	CASTG	5 cut(s)	73, 610, 733, 1167, 1187
TseFI	GTSAC	4 cut(s)	133, 275, 428, 1316
TseI	GCWGC	8 cut(s)	212, 497, 677, 758, 986, 1331, 1334, 1582
Tsp45I	GTSAC	4 cut(s)	133, 275, 428, 1316
TspDTI	ATGAA	6 cut(s)	481, 716, 1013, 1081, 1129, 1563
TspGWI	ACGGA	2 cut(s)	891, 1335
TspRI	CASTG	5 cut(s)	73, 610, 733, 1167, 1187
VpaK11BI	GGWCC	1 cut(s)	1253
XapI	RAATTY	1 cut(s)	525
XceI	RCATGY	2 cut(s)	772, 1317
XcmI	CCANNNNNNNNNTGG	1 cut(s)	260
XmiI	GTMKAC	2 cut(s)	830, 1310
XspI	CTAG	2 cut(s)	6, 1299
ZrmI	AGTACT	1 cut(s)	1060
Zsp2I	ATGCAT	1 cut(s)	109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.