AT1G19640

jasmonic acid carboxyl methyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
6788885 .. 6791919
3035 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19640.1

Sequence Viewer

Length: 1170 bp
ATGGAGGTAATGCGAGTTCTTCACATGAACAAAGGAAACGGTGAAACGAGTTATGCCAAGAACTCCACCGCTCAGAGTAACATAATATCTCTAGGCAGAAGAGTAATGGACGAGGCCTTGAAGAAGTTAATGATGAGCAATTCAGAGATTTCGAGCATTGGAATCGCCGACTTAGGCTGCTCCTCCGGTCCGAACAGTCTCTTGTCCATCTCCAACATAGTTGACACGATCCACAACTTGTGTCCTGACCTCGACCGTCCTGTCCCTGAGCTCAGAGTCTCTCTGAACGACCTCCCTAGCAATGACTTCAACTACATATGTGCTTCTTTGCCAGAGTTTTACGACCGGGTTAATAATAACAAGGAGGGTTTAGGGTTCGGTCGTGGAGGAGGAGAATCGTGTTTTGTGTCGGCCGTCCCAGGTTCGTTCTACGGACGTTTGTTTCCTCGCCGGAGCCTTCACTTTGTGCATTCTTCTTCTAGTTTACATTGGTTATCTCAGGTTCCATGTCGTGAGGCGGAGAAGGAAGACAGGACAATAACAGCTGATTTAGAAAACATGGGGAAAATATACATATCAAAGACAAGTCCTAAGAGTGCACATAAAGCTTATGCTCTTCAATTCCAAACTGATTTCTGGGTTTTTTTGAGATCGCGATCTGAGGAGTTGGTCCCGGGAGGCCGAATGGTTTTATCGTTCCTTGGTAGAAGATCACTGGATCCCACAACCGAAGAGAGTTGCTATCAATGGGAACTCCTAGCTCAAGCTCTTATGTCCATGGCCAAAGAGGGTATCATCGAGGAAGAGAAGATCGATGCTTTCAACGCTCCTTACTATGCTGCGAGCTCCGAAGAGTTGAAAATGGTGATAGAGAAAGAAGGGTCATTTTCGATCGATAGGCTTGAGATAAGTCCGATTGATTGGGAAGGTGGGAGTATCAGTGAGGAGAGTTATGACCTTGTAATAAGGTCCAAACCCGAAGCCCTAGCTAGTGGCCGAAGAGTGTCTAATACCATAAGAGCTGTGGTCGAGCCGATGCTAGAACCTACTTTCGGTGAAAATGTGATGGACGAGCTTTTTGAAAGGTATGCAAAGATCGTGGGAGAGTACTTCTATGTAAGCTCGCCACGATACGCTATTGTTATTCTTTCGCTCGTTAGAGCCGGTTGA

Protein Analysis

389

Amino Acids

43.44

Weight (kDa)

5.18

Isoelectric Point (pI)

62.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 39 - 387 1.7e-120 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 260
AccBSI CCGCTC 1 cut(s) 71
AccII CGCG 1 cut(s) 655
AciI CCGC 2 cut(s) 69, 518
AclWI GGATC 3 cut(s) 223, 713, 726
AcoI YGGCCR 3 cut(s) 411, 780, 994
AdeI CACNNNGTG 1 cut(s) 466
AfaI GTAC 1 cut(s) 1109
AfiI CCNNNNNNNGG 1 cut(s) 1052
AgsI TTSAA 6 cut(s) 121, 310, 620, 823, 859, 1082
AjnI CCWGG 1 cut(s) 418
Alw21I GWGCWC 3 cut(s) 273, 601, 848
Alw26I GTCTC 2 cut(s) 203, 283
Alw44I GTGCAC 1 cut(s) 597
AlwI GGATC 3 cut(s) 223, 713, 726
Ama87I CYCGRG 1 cut(s) 673
AoxI GGCC 5 cut(s) 114, 411, 679, 780, 994
ApaLI GTGCAC 1 cut(s) 597
ApeKI GCWGC 2 cut(s) 177, 839
ArsI GACNNNNNNTTYG 2 cut(s) 1061, 1093
AspS9I GGNCC 3 cut(s) 188, 670, 969
AsuC2I CCSGG 3 cut(s) 347, 674, 675
AsuHPI GGTGA 3 cut(s) 53, 877, 1067
AvaI CYCGRG 1 cut(s) 673
AvaII GGWCC 3 cut(s) 188, 670, 969
BaeGI GKGCMC 1 cut(s) 601
BalI TGGCCA 1 cut(s) 782
BamHI GGATCC 1 cut(s) 718
BanII GRGCYC 2 cut(s) 273, 848
BbsI GAAGAC 1 cut(s) 534
Bbv12I GWGCWC 3 cut(s) 273, 601, 848
BbvI GCAGC 2 cut(s) 164, 826
BccI CCATC 2 cut(s) 215, 1060
BceAI ACGGC 1 cut(s) 398
BcgI CGANNNNNNTGC 2 cut(s) 145, 179
BciT130I CCWGG 1 cut(s) 420
BcnI CCSGG 3 cut(s) 347, 674, 675
BcoDI GTCTC 2 cut(s) 203, 283
BfaI CTAG 7 cut(s) 92, 297, 480, 758, 986, 990, 1040
BisI GCNGC 2 cut(s) 178, 840
BlsI GCNGC 2 cut(s) 179, 841
BmcAI AGTACT 1 cut(s) 1109
Bme1390I CCNGG 4 cut(s) 347, 420, 674, 675
Bme18I GGWCC 3 cut(s) 188, 670, 969
BmeT110I CYCGRG 1 cut(s) 673
BmgT120I GGNCC 3 cut(s) 188, 670, 969
BmiI GGNNCC 4 cut(s) 455, 504, 672, 720
BmrFI CCNGG 4 cut(s) 347, 420, 674, 675
BmsI GCATC 2 cut(s) 805, 1026
BpiI GAAGAC 1 cut(s) 534
Bpu10I CCTNAGC 1 cut(s) 267
BpuEI CTTGAG 2 cut(s) 747, 923
BpuMI CCSGG 3 cut(s) 347, 674, 675
Bsa29I ATCGAT 2 cut(s) 813, 894
BsaBI GATNNNNATC 1 cut(s) 655
BsaJI CCNNGG 4 cut(s) 418, 673, 700, 777
BsaWI WCCGGW 1 cut(s) 185
BsaXI ACNNNNNCTCC 2 cut(s) 925, 955
Bsc4I CCNNNNNNNGG 1 cut(s) 1052
Bse118I RCCGGY 1 cut(s) 1163
Bse1I ACTGG 1 cut(s) 720
Bse3DI GCAATG 1 cut(s) 307
Bse8I GATNNNNATC 1 cut(s) 655
BseBI CCWGG 1 cut(s) 420
BseCI ATCGAT 2 cut(s) 813, 894
BseDI CCNNGG 4 cut(s) 418, 673, 700, 777
BseJI GATNNNNATC 1 cut(s) 655
BseLI CCNNNNNNNGG 1 cut(s) 1052
BseMI GCAATG 1 cut(s) 307
BseMII CTCAG 5 cut(s) 86, 258, 286, 512, 651
BseNI ACTGG 1 cut(s) 720
BseRI GAGGAG 5 cut(s) 172, 402, 405, 677, 959
BseSI GKGCMC 1 cut(s) 601
BseX3I CGGCCG 1 cut(s) 411
BseXI GCAGC 2 cut(s) 164, 826
Bsh1236I CGCG 1 cut(s) 655
Bsh1285I CGRYCG 5 cut(s) 256, 346, 382, 414, 894
BshFI GGCC 5 cut(s) 116, 413, 681, 782, 996
BshVI ATCGAT 2 cut(s) 813, 894
BsiEI CGRYCG 5 cut(s) 256, 346, 382, 414, 894
BsiHKAI GWGCWC 3 cut(s) 273, 601, 848
BsiHKCI CYCGRG 1 cut(s) 673
BsiSI CCGG 5 cut(s) 186, 346, 451, 674, 1164
BslFI GGGAC 3 cut(s) 248, 401, 656
BslI CCNNNNNNNGG 1 cut(s) 1052
BsmAI GTCTC 2 cut(s) 203, 283
BsmFI GGGAC 3 cut(s) 248, 401, 656
BsmI GAATGC 1 cut(s) 469
BsnI GGCC 5 cut(s) 116, 413, 681, 782, 996
BsoBI CYCGRG 1 cut(s) 673
Bsp1286I GDGCHC 3 cut(s) 273, 601, 848
Bsp143I GATC 8 cut(s) 228, 650, 656, 710, 718, 810, 891, 1095
Bsp19I CCATGG 1 cut(s) 777
Bsp68I TCGCGA 1 cut(s) 655
BspACI CCGC 2 cut(s) 69, 518
BspANI GGCC 5 cut(s) 116, 413, 681, 782, 996
BspCNI CTCAG 5 cut(s) 85, 259, 285, 511, 652
BspDI ATCGAT 2 cut(s) 813, 894
BspFNI CGCG 1 cut(s) 655
BspLI GGNNCC 4 cut(s) 455, 504, 672, 720
BspPI GGATC 3 cut(s) 223, 713, 726
BspQI GCTCTTC 1 cut(s) 621
BsrBI CCGCTC 1 cut(s) 71
BsrDI GCAATG 1 cut(s) 307
BsrFI RCCGGY 1 cut(s) 1163
BsrI ACTGG 1 cut(s) 720
BssAI RCCGGY 1 cut(s) 1163
BssECI CCNNGG 4 cut(s) 418, 673, 700, 777
BssMI GATC 8 cut(s) 228, 650, 656, 710, 718, 810, 891, 1095
BssT1I CCWWGG 2 cut(s) 700, 777
Bst2UI CCWGG 1 cut(s) 420
Bst4CI ACNGT 3 cut(s) 41, 197, 257
Bst6I CTCTTC 6 cut(s) 94, 621, 726, 798, 846, 994
BstC8I GCNNGC 2 cut(s) 844, 1124
BstDEI CTNAG 7 cut(s) 72, 172, 267, 272, 498, 591, 660
BstDSI CCRYGG 1 cut(s) 777
BstFNI CGCG 1 cut(s) 655
BstKTI GATC 8 cut(s) 231, 653, 659, 713, 721, 813, 894, 1098
BstMAI GTCTC 2 cut(s) 203, 283
BstMBI GATC 8 cut(s) 228, 650, 656, 710, 718, 810, 891, 1095
BstMCI CGRYCG 5 cut(s) 256, 346, 382, 414, 894
BstMWI GCNNNNNNNGC 2 cut(s) 605, 824
BstNI CCWGG 1 cut(s) 420
BstSCI CCNGG 4 cut(s) 345, 418, 672, 673
BstSLI GKGCMC 1 cut(s) 601
BstUI CGCG 1 cut(s) 655
BstV1I GCAGC 2 cut(s) 164, 826
BstV2I GAAGAC 1 cut(s) 534
BstX2I RGATCY 1 cut(s) 718
BstYI RGATCY 1 cut(s) 718
BstZI CGGCCG 1 cut(s) 411
Bsu15I ATCGAT 2 cut(s) 813, 894
BsuRI GGCC 5 cut(s) 116, 413, 681, 782, 996
BsuTUI ATCGAT 2 cut(s) 813, 894
BtgI CCRYGG 1 cut(s) 777
BtsIMutI CAGTG 2 cut(s) 713, 946
BtuMI TCGCGA 1 cut(s) 655
Cac8I GCNNGC 2 cut(s) 844, 1124
Cfr10I RCCGGY 1 cut(s) 1163
Cfr13I GGNCC 3 cut(s) 188, 670, 969
Cfr9I CCCGGG 1 cut(s) 673
ClaI ATCGAT 2 cut(s) 813, 894
CpoI CGGWCCG 1 cut(s) 188
Csp6I GTAC 1 cut(s) 1108
CspCI CAANNNNNGTGG 2 cut(s) 1080, 1115
CspI CGGWCCG 1 cut(s) 188
CviAII CATG 4 cut(s) 25, 507, 559, 778
CviQI GTAC 1 cut(s) 1108
DdeI CTNAG 7 cut(s) 72, 172, 267, 272, 498, 591, 660
DpnI GATC 8 cut(s) 230, 652, 658, 712, 720, 812, 893, 1097
DpnII GATC 8 cut(s) 228, 650, 656, 710, 718, 810, 891, 1095
DraIII CACNNNGTG 1 cut(s) 466
DrdI GACNNNNNNGTC 1 cut(s) 260
DseDI GACNNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 3 cut(s) 411, 780, 994
EagI CGGCCG 1 cut(s) 411
Eam1104I CTCTTC 6 cut(s) 94, 621, 726, 798, 846, 994
EarI CTCTTC 6 cut(s) 94, 621, 726, 798, 846, 994
EciI GGCGGA 1 cut(s) 533
Ecl136II GAGCTC 2 cut(s) 271, 846
EclXI CGGCCG 1 cut(s) 411
Eco130I CCWWGG 2 cut(s) 700, 777
Eco147I AGGCCT 1 cut(s) 116
Eco24I GRGCYC 2 cut(s) 273, 848
Eco47I GGWCC 3 cut(s) 188, 670, 969
Eco52I CGGCCG 1 cut(s) 411
Eco53kI GAGCTC 2 cut(s) 271, 846
Eco88I CYCGRG 1 cut(s) 673
EcoICRI GAGCTC 2 cut(s) 271, 846
EcoRII CCWGG 1 cut(s) 418
EcoT14I CCWWGG 2 cut(s) 700, 777
EcoT38I GRGCYC 2 cut(s) 273, 848
ErhI CCWWGG 2 cut(s) 700, 777
FaeI CATG 4 cut(s) 28, 510, 562, 781
FaqI GGGAC 3 cut(s) 248, 401, 656
FatI CATG 4 cut(s) 24, 506, 558, 777
FauNDI CATATG 1 cut(s) 317
Fnu4HI GCNGC 2 cut(s) 178, 840
FriOI GRGCYC 2 cut(s) 273, 848
Fsp4HI GCNGC 2 cut(s) 178, 840
FspBI CTAG 7 cut(s) 92, 297, 480, 758, 986, 990, 1040
GluI GCNGC 2 cut(s) 178, 840
HaeIII GGCC 5 cut(s) 116, 413, 681, 782, 996
HapII CCGG 5 cut(s) 186, 346, 451, 674, 1164
Hin1II CATG 4 cut(s) 28, 510, 562, 781
HincII GTYRAC 1 cut(s) 223
HindII GTYRAC 1 cut(s) 223
HindIII AAGCTT 1 cut(s) 606
HinfI GANTC 3 cut(s) 162, 276, 395
HpaII CCGG 5 cut(s) 186, 346, 451, 674, 1164
HphI GGTGA 3 cut(s) 53, 877, 1067
Hpy166II GTNNAC 3 cut(s) 223, 485, 599
Hpy188I TCNGA 8 cut(s) 75, 145, 192, 275, 285, 661, 850, 915
Hpy188III TCNNGA 3 cut(s) 245, 512, 654
Hpy8I GTNNAC 3 cut(s) 223, 485, 599
HpyAV CCTTC 4 cut(s) 467, 517, 872, 920
HpyCH4III ACNGT 3 cut(s) 41, 197, 257
HpyCH4IV ACGT 1 cut(s) 436
HpyCH4V TGCA 3 cut(s) 469, 599, 1091
HpyF10VI GCNNNNNNNGC 2 cut(s) 605, 824
HpyF3I CTNAG 7 cut(s) 72, 172, 267, 272, 498, 591, 660
HpySE526I ACGT 1 cut(s) 436
Hsp92II CATG 4 cut(s) 28, 510, 562, 781
Kzo9I GATC 8 cut(s) 228, 650, 656, 710, 718, 810, 891, 1095
LguI GCTCTTC 1 cut(s) 621
LmnI GCTCC 4 cut(s) 185, 453, 832, 851
Lsp1109I GCAGC 2 cut(s) 164, 826
LweI GCATC 2 cut(s) 805, 1026
MaeI CTAG 7 cut(s) 92, 297, 480, 758, 986, 990, 1040
MaeII ACGT 1 cut(s) 436
MaeIII GTNAC 1 cut(s) 77
MalI GATC 8 cut(s) 230, 652, 658, 712, 720, 812, 893, 1097
MbiI CCGCTC 1 cut(s) 71
MboI GATC 8 cut(s) 228, 650, 656, 710, 718, 810, 891, 1095
MflI RGATCY 1 cut(s) 718
MhlI GDGCHC 3 cut(s) 273, 601, 848
MlsI TGGCCA 1 cut(s) 782
MluCI AATT 2 cut(s) 139, 620
MluNI TGGCCA 1 cut(s) 782
MlyI GAGTC 1 cut(s) 285
MmeI TCCRAC 1 cut(s) 237
Mox20I TGGCCA 1 cut(s) 782
MscI TGGCCA 1 cut(s) 782
MseI TTAA 2 cut(s) 128, 351
Msp20I TGGCCA 1 cut(s) 782
MspA1I CMGCKG 1 cut(s) 545
MspI CCGG 5 cut(s) 186, 346, 451, 674, 1164
MspR9I CCNGG 4 cut(s) 347, 420, 674, 675
Mva1269I GAATGC 1 cut(s) 469
MvaI CCWGG 1 cut(s) 420
MvnI CGCG 1 cut(s) 655
MwoI GCNNNNNNNGC 2 cut(s) 605, 824
NciI CCSGG 3 cut(s) 347, 674, 675
NcoI CCATGG 1 cut(s) 777
NdeI CATATG 1 cut(s) 317
NdeII GATC 8 cut(s) 228, 650, 656, 710, 718, 810, 891, 1095
NlaIII CATG 4 cut(s) 28, 510, 562, 781
NlaIV GGNNCC 4 cut(s) 455, 504, 672, 720
NruI TCGCGA 1 cut(s) 655
PceI AGGCCT 1 cut(s) 116
PciSI GCTCTTC 1 cut(s) 621
PctI GAATGC 1 cut(s) 469
PfeI GAWTC 2 cut(s) 162, 395
PkrI GCNGC 2 cut(s) 179, 841
Ple19I CGATCG 1 cut(s) 894
PleI GAGTC 1 cut(s) 284
PpsI GAGTC 1 cut(s) 284
Psp124BI GAGCTC 2 cut(s) 273, 848
Psp6I CCWGG 1 cut(s) 418
PspGI CCWGG 1 cut(s) 418
PspN4I GGNNCC 4 cut(s) 455, 504, 672, 720
PspPI GGNCC 3 cut(s) 188, 670, 969
PsrI GAACNNNNNNTAC 1 cut(s) 32
PsuI RGATCY 1 cut(s) 718
PvuI CGATCG 1 cut(s) 894
PvuII CAGCTG 1 cut(s) 545
RruI TCGCGA 1 cut(s) 655
RsaI GTAC 1 cut(s) 1109
RsaNI GTAC 1 cut(s) 1108
Rsr2I CGGWCCG 1 cut(s) 188
RsrII CGGWCCG 1 cut(s) 188
SacI GAGCTC 2 cut(s) 273, 848
SapI GCTCTTC 1 cut(s) 621
SaqAI TTAA 2 cut(s) 128, 351
SatI GCNGC 2 cut(s) 178, 840
Sau3AI GATC 8 cut(s) 228, 650, 656, 710, 718, 810, 891, 1095
Sau96I GGNCC 3 cut(s) 188, 670, 969
ScaI AGTACT 1 cut(s) 1109
SchI GAGTC 1 cut(s) 285
ScrFI CCNGG 4 cut(s) 347, 420, 674, 675
SduI GDGCHC 3 cut(s) 273, 601, 848
SfaNI GCATC 2 cut(s) 805, 1026
SinI GGWCC 3 cut(s) 188, 670, 969
SmaI CCCGGG 1 cut(s) 675
SmlI CTYRAG 2 cut(s) 762, 902
SmoI CTYRAG 2 cut(s) 762, 902
Sse9I AATT 2 cut(s) 139, 620
SseBI AGGCCT 1 cut(s) 116
SsiI CCGC 2 cut(s) 69, 518
SspMI CTAG 7 cut(s) 92, 297, 480, 758, 986, 990, 1040
SstI GAGCTC 2 cut(s) 273, 848
StuI AGGCCT 1 cut(s) 116
StyD4I CCNGG 4 cut(s) 345, 418, 672, 673
StyI CCWWGG 2 cut(s) 700, 777
TaaI ACNGT 3 cut(s) 41, 197, 257
TaiI ACGT 1 cut(s) 439
TaqI TCGA 7 cut(s) 152, 252, 798, 813, 890, 894, 1029
TaqII GACCGA 1 cut(s) 368
TasI AATT 2 cut(s) 139, 620
TatI WGTACW 1 cut(s) 1107
TfiI GAWTC 2 cut(s) 162, 395
Tru1I TTAA 2 cut(s) 128, 351
Tru9I TTAA 2 cut(s) 128, 351
TscAI CASTG 2 cut(s) 720, 946
TseI GCWGC 2 cut(s) 177, 839
TspDTI ATGAA 1 cut(s) 41
TspGWI ACGGA 1 cut(s) 447
TspMI CCCGGG 1 cut(s) 673
TspRI CASTG 2 cut(s) 720, 946
VneI GTGCAC 1 cut(s) 597
VpaK11BI GGWCC 3 cut(s) 188, 670, 969
XcmI CCANNNNNNNNNTGG 1 cut(s) 1021
XmaI CCCGGG 1 cut(s) 673
XspI CTAG 7 cut(s) 92, 297, 480, 758, 986, 990, 1040
ZrmI AGTACT 1 cut(s) 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.