Belongs to the cytochrome P450 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19630 AT1G19630 AT1G19630 |
| fragaria_vesca | FvH4_2g39460 FvH4_2g39460 FvH4_2g39460 FvH4_2g39460 FvH4_2g39460 |
| malus_domestica | MD08G1027400.v1.1 |
| prunus_persica | Prupe.1G375900_v2.0.a1 |
| pyrus_communis | pycom08g02130 |
| rosa_chinensis | RchiOBHm_Chr6g0301491 |
| rosa_laevigata | RLG00000011249 |
| rosa_multiflora | Rmu_sc0014417.1_g000022 |
| rosa_roxburghii | Rroxscaffold_7G00166710 |
| rosa_rugosa | Rorug06G0305400 |
| rosa_samantha | Rh6AG419300 Rh6CG432400 Rh6DG418300 |
| rosa_wichuraiana | Rw6G036250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 821 |
| AbsI | CCTCGAGG | 1 cut(s) | 1234 |
| Acc36I | ACCTGC | 3 cut(s) | 821, 881, 1263 |
| AccIII | TCCGGA | 1 cut(s) | 19 |
| AciI | CCGC | 2 cut(s) | 377, 914 |
| AclWI | GGATC | 3 cut(s) | 1154, 1190, 1208 |
| AcoI | YGGCCR | 1 cut(s) | 439 |
| AcsI | RAATTY | 4 cut(s) | 347, 466, 813, 932 |
| AcuI | CTGAAG | 2 cut(s) | 247, 701 |
| AfaI | GTAC | 3 cut(s) | 110, 1188, 1208 |
| AfeI | AGCGCT | 1 cut(s) | 564 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 170, 1081 |
| AflIII | ACRYGT | 1 cut(s) | 1304 |
| AgsI | TTSAA | 6 cut(s) | 9, 512, 1228, 1257, 1398, 1406 |
| AhlI | ACTAGT | 2 cut(s) | 382, 1480 |
| AjnI | CCWGG | 3 cut(s) | 78, 145, 920 |
| AleI | CACNNNNGTG | 1 cut(s) | 914 |
| AluBI | AGCT | 6 cut(s) | 399, 515, 650, 665, 1115, 1283 |
| AluI | AGCT | 6 cut(s) | 399, 515, 650, 665, 1115, 1283 |
| Alw21I | GWGCWC | 1 cut(s) | 308 |
| Alw26I | GTCTC | 3 cut(s) | 170, 248, 1361 |
| AlwI | GGATC | 3 cut(s) | 1154, 1190, 1208 |
| Ama87I | CYCGRG | 3 cut(s) | 340, 692, 1234 |
| Aor13HI | TCCGGA | 1 cut(s) | 19 |
| Aor51HI | AGCGCT | 1 cut(s) | 564 |
| AoxI | GGCC | 3 cut(s) | 439, 712, 1083 |
| ApeKI | GCWGC | 1 cut(s) | 194 |
| ApoI | RAATTY | 4 cut(s) | 347, 466, 813, 932 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 458, 490 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1000 |
| AspLEI | GCGC | 2 cut(s) | 240, 565 |
| AspS9I | GGNCC | 2 cut(s) | 267, 712 |
| AsuC2I | CCSGG | 2 cut(s) | 693, 694 |
| AsuHPI | GGTGA | 5 cut(s) | 928, 953, 1343, 1393, 1459 |
| AsuII | TTCGAA | 1 cut(s) | 1055 |
| AvaI | CYCGRG | 3 cut(s) | 340, 692, 1234 |
| AvaII | GGWCC | 1 cut(s) | 267 |
| AxyI | CCTNAGG | 1 cut(s) | 1076 |
| BalI | TGGCCA | 1 cut(s) | 441 |
| BanII | GRGCYC | 1 cut(s) | 1419 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 1461 |
| Bbv12I | GWGCWC | 1 cut(s) | 308 |
| BbvI | GCAGC | 1 cut(s) | 181 |
| BccI | CCATC | 3 cut(s) | 919, 1126, 1285 |
| BceAI | ACGGC | 3 cut(s) | 225, 268, 1030 |
| BciT130I | CCWGG | 3 cut(s) | 80, 147, 922 |
| BciVI | GTATCC | 1 cut(s) | 611 |
| BcnI | CCSGG | 2 cut(s) | 693, 694 |
| BcoDI | GTCTC | 3 cut(s) | 170, 248, 1361 |
| BcuI | ACTAGT | 2 cut(s) | 382, 1480 |
| BfaI | CTAG | 5 cut(s) | 53, 383, 699, 1112, 1481 |
| BfmI | CTRYAG | 2 cut(s) | 104, 903 |
| BfoI | RGCGCY | 1 cut(s) | 566 |
| BfuAI | ACCTGC | 3 cut(s) | 821, 881, 1263 |
| BfuI | GTATCC | 1 cut(s) | 611 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 447 |
| BisI | GCNGC | 1 cut(s) | 195 |
| BlsI | GCNGC | 1 cut(s) | 196 |
| BmcAI | AGTACT | 1 cut(s) | 110 |
| Bme1390I | CCNGG | 5 cut(s) | 80, 147, 693, 694, 922 |
| Bme18I | GGWCC | 1 cut(s) | 267 |
| BmeT110I | CYCGRG | 3 cut(s) | 340, 692, 1234 |
| BmgT120I | GGNCC | 2 cut(s) | 267, 712 |
| BmiI | GGNNCC | 1 cut(s) | 1103 |
| BmrFI | CCNGG | 5 cut(s) | 80, 147, 693, 694, 922 |
| BmsI | GCATC | 3 cut(s) | 1032, 1165, 1326 |
| BoxI | GACNNNNGTC | 1 cut(s) | 290 |
| BpmI | CTGGAG | 1 cut(s) | 129 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1326 |
| Bpu14I | TTCGAA | 1 cut(s) | 1055 |
| BpuEI | CTTGAG | 2 cut(s) | 551, 1139 |
| BpuMI | CCSGG | 2 cut(s) | 693, 694 |
| Bsa29I | ATCGAT | 1 cut(s) | 1212 |
| BsaI | GGTCTC | 1 cut(s) | 170 |
| BsaJI | CCNNGG | 4 cut(s) | 318, 692, 879, 1097 |
| BsaWI | WCCGGW | 2 cut(s) | 19, 1444 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1291, 1321 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 170, 1081 |
| Bse1I | ACTGG | 1 cut(s) | 1029 |
| Bse21I | CCTNAGG | 1 cut(s) | 1076 |
| Bse3DI | GCAATG | 3 cut(s) | 591, 762, 844 |
| BseAI | TCCGGA | 1 cut(s) | 19 |
| BseBI | CCWGG | 3 cut(s) | 80, 147, 922 |
| BseCI | ATCGAT | 1 cut(s) | 1212 |
| BseDI | CCNNGG | 4 cut(s) | 318, 692, 879, 1097 |
| BseGI | GGATG | 3 cut(s) | 930, 1296, 1320 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 170, 1081 |
| BseMI | GCAATG | 3 cut(s) | 591, 762, 844 |
| BseMII | CTCAG | 1 cut(s) | 674 |
| BseNI | ACTGG | 1 cut(s) | 1029 |
| BseXI | GCAGC | 1 cut(s) | 181 |
| BseYI | CCCAGC | 2 cut(s) | 525, 1217 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1092 |
| BshFI | GGCC | 3 cut(s) | 441, 714, 1085 |
| BshVI | ATCGAT | 1 cut(s) | 1212 |
| BsiEI | CGRYCG | 1 cut(s) | 1092 |
| BsiHKAI | GWGCWC | 1 cut(s) | 308 |
| BsiHKCI | CYCGRG | 3 cut(s) | 340, 692, 1234 |
| BsiSI | CCGG | 3 cut(s) | 20, 693, 1445 |
| BslFI | GGGAC | 2 cut(s) | 298, 709 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 170, 1081 |
| BsmAI | GTCTC | 3 cut(s) | 170, 248, 1361 |
| BsmBI | CGTCTC | 2 cut(s) | 248, 1361 |
| BsmFI | GGGAC | 2 cut(s) | 298, 709 |
| BsnI | GGCC | 3 cut(s) | 441, 714, 1085 |
| Bso31I | GGTCTC | 1 cut(s) | 170 |
| BsoBI | CYCGRG | 3 cut(s) | 340, 692, 1234 |
| Bsp119I | TTCGAA | 1 cut(s) | 1055 |
| Bsp1286I | GDGCHC | 2 cut(s) | 308, 1419 |
| Bsp13I | TCCGGA | 1 cut(s) | 19 |
| Bsp1407I | TGTACA | 1 cut(s) | 1206 |
| Bsp143I | GATC | 7 cut(s) | 168, 496, 1089, 1146, 1195, 1213, 1383 |
| Bsp19I | CCATGG | 1 cut(s) | 879 |
| BspACI | CCGC | 2 cut(s) | 377, 914 |
| BspANI | GGCC | 3 cut(s) | 441, 714, 1085 |
| BspCNI | CTCAG | 1 cut(s) | 675 |
| BspDI | ATCGAT | 1 cut(s) | 1212 |
| BspEI | TCCGGA | 1 cut(s) | 19 |
| BspHI | TCATGA | 1 cut(s) | 735 |
| BspLI | GGNNCC | 1 cut(s) | 1103 |
| BspMAI | CTGCAG | 1 cut(s) | 108 |
| BspMI | ACCTGC | 3 cut(s) | 821, 881, 1263 |
| BspPI | GGATC | 3 cut(s) | 1154, 1190, 1208 |
| BspQI | GCTCTTC | 1 cut(s) | 1424 |
| BspT104I | TTCGAA | 1 cut(s) | 1055 |
| BspTNI | GGTCTC | 1 cut(s) | 170 |
| BsrDI | GCAATG | 3 cut(s) | 591, 762, 844 |
| BsrGI | TGTACA | 1 cut(s) | 1206 |
| BsrI | ACTGG | 1 cut(s) | 1029 |
| BssECI | CCNNGG | 4 cut(s) | 318, 692, 879, 1097 |
| BssMI | GATC | 7 cut(s) | 168, 496, 1089, 1146, 1195, 1213, 1383 |
| BssT1I | CCWWGG | 3 cut(s) | 318, 879, 1097 |
| Bst2UI | CCWGG | 3 cut(s) | 80, 147, 922 |
| Bst4CI | ACNGT | 4 cut(s) | 492, 544, 1204, 1355 |
| Bst6I | CTCTTC | 3 cut(s) | 350, 849, 1424 |
| BstAUI | TGTACA | 1 cut(s) | 1206 |
| BstBI | TTCGAA | 1 cut(s) | 1055 |
| BstC8I | GCNNGC | 3 cut(s) | 401, 672, 1083 |
| BstDEI | CTNAG | 5 cut(s) | 683, 937, 1076, 1279, 1326 |
| BstDSI | CCRYGG | 1 cut(s) | 879 |
| BstEII | GGTNACC | 1 cut(s) | 916 |
| BstF5I | GGATG | 3 cut(s) | 930, 1296, 1320 |
| BstH2I | RGCGCY | 1 cut(s) | 566 |
| BstHHI | GCGC | 2 cut(s) | 240, 565 |
| BstKTI | GATC | 7 cut(s) | 171, 499, 1092, 1149, 1198, 1216, 1386 |
| BstMAI | GTCTC | 3 cut(s) | 170, 248, 1361 |
| BstMBI | GATC | 7 cut(s) | 168, 496, 1089, 1146, 1195, 1213, 1383 |
| BstMCI | CGRYCG | 1 cut(s) | 1092 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 447, 671 |
| BstNI | CCWGG | 3 cut(s) | 80, 147, 922 |
| BstNSI | RCATGY | 3 cut(s) | 293, 579, 1308 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 290 |
| BstPI | GGTNACC | 1 cut(s) | 916 |
| BstSCI | CCNGG | 5 cut(s) | 78, 145, 691, 692, 920 |
| BstSFI | CTRYAG | 2 cut(s) | 104, 903 |
| BstV1I | GCAGC | 1 cut(s) | 181 |
| Bsu15I | ATCGAT | 1 cut(s) | 1212 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1076 |
| BsuI | GTATCC | 1 cut(s) | 611 |
| BsuRI | GGCC | 3 cut(s) | 441, 714, 1085 |
| BsuTUI | ATCGAT | 1 cut(s) | 1212 |
| BtgI | CCRYGG | 1 cut(s) | 879 |
| BtsCI | GGATG | 3 cut(s) | 930, 1296, 1320 |
| BtsIMutI | CAGTG | 3 cut(s) | 483, 540, 1022 |
| BveI | ACCTGC | 3 cut(s) | 821, 881, 1263 |
| Cac8I | GCNNGC | 3 cut(s) | 401, 672, 1083 |
| CciI | TCATGA | 1 cut(s) | 735 |
| CfoI | GCGC | 2 cut(s) | 240, 565 |
| Cfr13I | GGNCC | 2 cut(s) | 267, 712 |
| Cfr9I | CCCGGG | 1 cut(s) | 692 |
| ClaI | ATCGAT | 1 cut(s) | 1212 |
| CseI | GACGC | 1 cut(s) | 295 |
| Csp6I | GTAC | 3 cut(s) | 109, 1187, 1207 |
| CviAII | CATG | 8 cut(s) | 190, 290, 576, 653, 736, 880, 1305, 1321 |
| CviQI | GTAC | 3 cut(s) | 109, 1187, 1207 |
| DdeI | CTNAG | 5 cut(s) | 683, 937, 1076, 1279, 1326 |
| DpnI | GATC | 7 cut(s) | 170, 498, 1091, 1148, 1197, 1215, 1385 |
| DpnII | GATC | 7 cut(s) | 168, 496, 1089, 1146, 1195, 1213, 1383 |
| EaeI | YGGCCR | 1 cut(s) | 439 |
| Eam1104I | CTCTTC | 3 cut(s) | 350, 849, 1424 |
| EarI | CTCTTC | 3 cut(s) | 350, 849, 1424 |
| Eco130I | CCWWGG | 3 cut(s) | 318, 879, 1097 |
| Eco24I | GRGCYC | 1 cut(s) | 1419 |
| Eco31I | GGTCTC | 1 cut(s) | 170 |
| Eco47I | GGWCC | 1 cut(s) | 267 |
| Eco47III | AGCGCT | 1 cut(s) | 564 |
| Eco57I | CTGAAG | 2 cut(s) | 247, 701 |
| Eco81I | CCTNAGG | 1 cut(s) | 1076 |
| Eco88I | CYCGRG | 3 cut(s) | 340, 692, 1234 |
| Eco91I | GGTNACC | 1 cut(s) | 916 |
| EcoO109I | RGGNCCY | 1 cut(s) | 712 |
| EcoO65I | GGTNACC | 1 cut(s) | 916 |
| EcoRII | CCWGG | 3 cut(s) | 78, 145, 920 |
| EcoT14I | CCWWGG | 3 cut(s) | 318, 879, 1097 |
| EcoT38I | GRGCYC | 1 cut(s) | 1419 |
| ErhI | CCWWGG | 3 cut(s) | 318, 879, 1097 |
| Esp3I | CGTCTC | 2 cut(s) | 248, 1361 |
| FaeI | CATG | 8 cut(s) | 193, 293, 579, 656, 739, 883, 1308, 1324 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 654, 686, 966, 998 |
| FaqI | GGGAC | 2 cut(s) | 298, 709 |
| FatI | CATG | 8 cut(s) | 189, 289, 575, 652, 735, 879, 1304, 1320 |
| Fnu4HI | GCNGC | 1 cut(s) | 195 |
| FokI | GGATG | 3 cut(s) | 937, 1303, 1327 |
| FriOI | GRGCYC | 1 cut(s) | 1419 |
| Fsp4HI | GCNGC | 1 cut(s) | 195 |
| FspBI | CTAG | 5 cut(s) | 53, 383, 699, 1112, 1481 |
| GlaI | GCGC | 2 cut(s) | 239, 564 |
| GluI | GCNGC | 1 cut(s) | 195 |
| GsaI | CCCAGC | 2 cut(s) | 529, 1221 |
| GsuI | CTGGAG | 1 cut(s) | 129 |
| HaeII | RGCGCY | 1 cut(s) | 566 |
| HaeIII | GGCC | 3 cut(s) | 441, 714, 1085 |
| HapII | CCGG | 3 cut(s) | 20, 693, 1445 |
| HgaI | GACGC | 1 cut(s) | 295 |
| HhaI | GCGC | 2 cut(s) | 240, 565 |
| Hin1II | CATG | 8 cut(s) | 193, 293, 579, 656, 739, 883, 1308, 1324 |
| Hin6I | GCGC | 2 cut(s) | 238, 563 |
| HinP1I | GCGC | 2 cut(s) | 238, 563 |
| HincII | GTYRAC | 1 cut(s) | 63 |
| HindII | GTYRAC | 1 cut(s) | 63 |
| HindIII | AAGCTT | 1 cut(s) | 397 |
| HinfI | GANTC | 4 cut(s) | 338, 1070, 1394, 1456 |
| HpaI | GTTAAC | 1 cut(s) | 63 |
| HpaII | CCGG | 3 cut(s) | 20, 693, 1445 |
| HphI | GGTGA | 5 cut(s) | 928, 953, 1343, 1393, 1459 |
| Hpy166II | GTNNAC | 3 cut(s) | 63, 1189, 1207 |
| Hpy188I | TCNGA | 6 cut(s) | 90, 173, 233, 248, 684, 1200 |
| Hpy188III | TCNNGA | 9 cut(s) | 20, 265, 352, 568, 736, 896, 950, 1118, 1150 |
| Hpy8I | GTNNAC | 3 cut(s) | 63, 1189, 1207 |
| Hpy99I | CGWCG | 2 cut(s) | 1204, 1469 |
| HpyAV | CCTTC | 7 cut(s) | 634, 725, 771, 1051, 1060, 1130, 1372 |
| HpyCH4III | ACNGT | 4 cut(s) | 492, 544, 1204, 1355 |
| HpyCH4V | TGCA | 5 cut(s) | 106, 579, 637, 674, 890 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 447, 671 |
| HpyF3I | CTNAG | 5 cut(s) | 683, 937, 1076, 1279, 1326 |
| Hsp92II | CATG | 8 cut(s) | 193, 293, 579, 656, 739, 883, 1308, 1324 |
| HspAI | GCGC | 2 cut(s) | 238, 563 |
| Kpn2I | TCCGGA | 1 cut(s) | 19 |
| KspAI | GTTAAC | 1 cut(s) | 63 |
| Kzo9I | GATC | 7 cut(s) | 168, 496, 1089, 1146, 1195, 1213, 1383 |
| LguI | GCTCTTC | 1 cut(s) | 1424 |
| Lsp1109I | GCAGC | 1 cut(s) | 181 |
| LweI | GCATC | 3 cut(s) | 1032, 1165, 1326 |
| MaeI | CTAG | 5 cut(s) | 53, 383, 699, 1112, 1481 |
| MaeIII | GTNAC | 3 cut(s) | 916, 1360, 1453 |
| MalI | GATC | 7 cut(s) | 170, 498, 1091, 1148, 1197, 1215, 1385 |
| MboI | GATC | 7 cut(s) | 168, 496, 1089, 1146, 1195, 1213, 1383 |
| MboII | GAAGA | 8 cut(s) | 367, 739, 786, 806, 866, 1340, 1411, 1481 |
| MfeI | CAATTG | 1 cut(s) | 443 |
| MhlI | GDGCHC | 2 cut(s) | 308, 1419 |
| MlsI | TGGCCA | 1 cut(s) | 441 |
| MluNI | TGGCCA | 1 cut(s) | 441 |
| MlyI | GAGTC | 2 cut(s) | 332, 1450 |
| MmeI | TCCRAC | 1 cut(s) | 1223 |
| Mox20I | TGGCCA | 1 cut(s) | 441 |
| MroI | TCCGGA | 1 cut(s) | 19 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1000 |
| MscI | TGGCCA | 1 cut(s) | 441 |
| MseI | TTAA | 9 cut(s) | 62, 71, 602, 705, 782, 875, 1019, 1035, 1430 |
| MslI | CAYNNNNRTG | 3 cut(s) | 657, 914, 968 |
| Msp20I | TGGCCA | 1 cut(s) | 441 |
| MspA1I | CMGCKG | 1 cut(s) | 914 |
| MspI | CCGG | 3 cut(s) | 20, 693, 1445 |
| MspR9I | CCNGG | 5 cut(s) | 80, 147, 693, 694, 922 |
| MunI | CAATTG | 1 cut(s) | 443 |
| MvaI | CCWGG | 3 cut(s) | 80, 147, 922 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 447, 671 |
| NciI | CCSGG | 2 cut(s) | 693, 694 |
| NcoI | CCATGG | 1 cut(s) | 879 |
| NdeII | GATC | 7 cut(s) | 168, 496, 1089, 1146, 1195, 1213, 1383 |
| NlaIII | CATG | 8 cut(s) | 193, 293, 579, 656, 739, 883, 1308, 1324 |
| NlaIV | GGNNCC | 1 cut(s) | 1103 |
| NmuCI | GTSAC | 3 cut(s) | 916, 1360, 1453 |
| NspI | RCATGY | 3 cut(s) | 293, 579, 1308 |
| NspV | TTCGAA | 1 cut(s) | 1055 |
| OliI | CACNNNNGTG | 1 cut(s) | 914 |
| PaeR7I | CTCGAG | 1 cut(s) | 1234 |
| PagI | TCATGA | 1 cut(s) | 735 |
| PaqCI | CACCTGC | 1 cut(s) | 821 |
| PciI | ACATGT | 1 cut(s) | 1304 |
| PciSI | GCTCTTC | 1 cut(s) | 1424 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1000 |
| PfeI | GAWTC | 2 cut(s) | 1070, 1394 |
| PfoI | TCCNGGA | 1 cut(s) | 145 |
| PkrI | GCNGC | 1 cut(s) | 196 |
| Ple19I | CGATCG | 1 cut(s) | 1092 |
| PleI | GAGTC | 2 cut(s) | 332, 1450 |
| PpsI | GAGTC | 2 cut(s) | 332, 1450 |
| PscI | ACATGT | 1 cut(s) | 1304 |
| PshAI | GACNNNNGTC | 1 cut(s) | 290 |
| Psp6I | CCWGG | 3 cut(s) | 78, 145, 920 |
| PspEI | GGTNACC | 1 cut(s) | 916 |
| PspFI | CCCAGC | 2 cut(s) | 525, 1217 |
| PspGI | CCWGG | 3 cut(s) | 78, 145, 920 |
| PspN4I | GGNNCC | 1 cut(s) | 1103 |
| PspPI | GGNCC | 2 cut(s) | 267, 712 |
| PspXI | VCTCGAGB | 1 cut(s) | 1234 |
| PstI | CTGCAG | 1 cut(s) | 108 |
| PvuI | CGATCG | 1 cut(s) | 1092 |
| RsaI | GTAC | 3 cut(s) | 110, 1188, 1208 |
| RsaNI | GTAC | 3 cut(s) | 109, 1187, 1207 |
| RseI | CAYNNNNRTG | 3 cut(s) | 657, 914, 968 |
| SapI | GCTCTTC | 1 cut(s) | 1424 |
| SaqAI | TTAA | 9 cut(s) | 62, 71, 602, 705, 782, 875, 1019, 1035, 1430 |
| SatI | GCNGC | 1 cut(s) | 195 |
| Sau3AI | GATC | 7 cut(s) | 168, 496, 1089, 1146, 1195, 1213, 1383 |
| Sau96I | GGNCC | 2 cut(s) | 267, 712 |
| ScaI | AGTACT | 1 cut(s) | 110 |
| SchI | GAGTC | 2 cut(s) | 332, 1450 |
| ScrFI | CCNGG | 5 cut(s) | 80, 147, 693, 694, 922 |
| SduI | GDGCHC | 2 cut(s) | 308, 1419 |
| SfaNI | GCATC | 3 cut(s) | 1032, 1165, 1326 |
| SfcI | CTRYAG | 2 cut(s) | 104, 903 |
| Sfr274I | CTCGAG | 1 cut(s) | 1234 |
| SfuI | TTCGAA | 1 cut(s) | 1055 |
| SinI | GGWCC | 1 cut(s) | 267 |
| SlaI | CTCGAG | 1 cut(s) | 1234 |
| SmaI | CCCGGG | 1 cut(s) | 694 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 657, 914, 968 |
| SmlI | CTYRAG | 3 cut(s) | 566, 1118, 1234 |
| SmoI | CTYRAG | 3 cut(s) | 566, 1118, 1234 |
| SpeI | ACTAGT | 2 cut(s) | 382, 1480 |
| SsiI | CCGC | 2 cut(s) | 377, 914 |
| SspI | AATATT | 1 cut(s) | 1253 |
| SspMI | CTAG | 5 cut(s) | 53, 383, 699, 1112, 1481 |
| StyD4I | CCNGG | 5 cut(s) | 78, 145, 691, 692, 920 |
| StyI | CCWWGG | 3 cut(s) | 318, 879, 1097 |
| TaaI | ACNGT | 4 cut(s) | 492, 544, 1204, 1355 |
| TaqI | TCGA | 9 cut(s) | 154, 302, 495, 1055, 1088, 1212, 1235, 1386, 1464 |
| TatI | WGTACW | 2 cut(s) | 108, 1206 |
| TfiI | GAWTC | 2 cut(s) | 1070, 1394 |
| Tru1I | TTAA | 9 cut(s) | 62, 71, 602, 705, 782, 875, 1019, 1035, 1430 |
| Tru9I | TTAA | 9 cut(s) | 62, 71, 602, 705, 782, 875, 1019, 1035, 1430 |
| TscAI | CASTG | 3 cut(s) | 483, 547, 1029 |
| TseFI | GTSAC | 3 cut(s) | 916, 1360, 1453 |
| TseI | GCWGC | 1 cut(s) | 194 |
| Tsp45I | GTSAC | 3 cut(s) | 916, 1360, 1453 |
| TspMI | CCCGGG | 1 cut(s) | 692 |
| TspRI | CASTG | 3 cut(s) | 483, 547, 1029 |
| VpaK11BI | GGWCC | 1 cut(s) | 267 |
| XapI | RAATTY | 4 cut(s) | 347, 466, 813, 932 |
| XceI | RCATGY | 3 cut(s) | 293, 579, 1308 |
| XhoI | CTCGAG | 1 cut(s) | 1234 |
| XmaI | CCCGGG | 1 cut(s) | 692 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1000 |
| XspI | CTAG | 5 cut(s) | 53, 383, 699, 1112, 1481 |
| ZrmI | AGTACT | 1 cut(s) | 110 |