FvH4_2g39460

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
28345946 .. 28348962
3017 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g39460.t5

Sequence Viewer

Length: 1482 bp
ATGGCTTCGATTTTGCTTCCAGAAAGTCTTTGCTTTCCTTGCTGGGGAGGGCTAGTTGTGTTAACTGCCTTAACATTCATGGTTTATCAGATTATGAGTCACCTGCAGTGCTACTGTCAACAAGAACCAAAGGTTGATATTCCTCCAGGCACGCAAGGATTACCGTTGATCGGCGAGACCTTACACTTCATGGCTTCCATTAACAGTGGCAAAGGGTTTTACGAGTTTGTCAGACTGCGCCGTCTCCGATACGGGAAATGCTTCAGGACCAACATATTTGGGGGGACGCATGTCTTTATATCGAGCACGGAGTCAGGCAAGGCAATTCTAAACAATGACTTGGGAAAATTCGGAAAGAGATATATAAAGTCTATTGCGGAGCTAGTGGGAAATCAAAGCTTGCTGTGTGCTTCACAGCAACACCACAAACTACTTCGTGGCCATCTGGGCAGTTTGTTCTCTACTAATTCTCTTTCGGTGTTCATCAAACAGTTTGATCAGCTCATTGTCGAAGCTCTAAAATGCTGGGAACATCAAAGCACTGTGGTTATACAAGTTGAAGCACTGAAGATAACTGGCAAAGCAATGTGTAAGATGTTGTTAAGCATGGAAAGTGGATACGAGTTGGAGGTGTTGCAGAAGGAGGTAGCTCATGTTTGTGAAGCTATGCTAGCATTTCCTTTAAGGTTGCCTGGGACTAGATTTTACAAGGGCCTTCAGGGGAGGAAGAAAATCATGAGCATAATTGATCAAGCAATGAGAGAAAGGAGAAGAAGAGGGTTAAAAGCTAATGAAGATGATCATCTACAACAAATTTTGAGAGATGAAGCAGACGGCCATGGGCTAACAGATGAAGAGGTCAGAGACAATATATTAACCATGGTAATTGCAGGTCAGGATACCACAGCCACTGCAATGACCTGGATGGTGAAATTCTTGGGTGAAAATCCAGAGGTGCTTCACACTCTCATGAAAGAACAACTTGACTTGGGGAGGAAAACTTCGTCAAAGTCATTTCTAACACTGGAAAGTATTAACGAGATGCCTTATGCTTCAAAGGTAGTGAAGGAATCCCTAAGGCTGGCCTCAATCGTGCCTTGGTTCCCAAGACTAGCTCTAGAGGATTGCGAGATGGAAGGATTTAGGATCAAGAAAGGGTGGAACGTAAATGTTGATGCAAAATCGATACACCTTGATCCGACGGTGTACATCGATCCCGACAAGTTCAATCCCTCGAGGTTTGATGATGAACATTCAAAAGGAGGGTACGGCAGGTTCTTAGCTTTTGGGATGGGAGGGAGGACATGTTTGGGGATGAACATGGCTAAGGCTATGATGCTAGTTTTTCTTCACCGACTCGTCACTACTTACAGGTGGAAGGTGATCGATCAAGATTCGAGCATTGAAAAATGGGGGCTCTTCTCAAAGTTAAGAAGCGGATGTCCGGTGACTGTGACTCGTATCAACGAAGATATATACTAG

Protein Analysis

494

Amino Acids

55.84

Weight (kDa)

8.78

Isoelectric Point (pI)

40.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 62 - 311 7.1e-60 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011224)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 111
AasI GACNNNNNNGTC 1 cut(s) 240
AbsI CCTCGAGG 1 cut(s) 1234
Acc36I ACCTGC 3 cut(s) 111, 881, 1263
AciI CCGC 2 cut(s) 377, 1437
AclWI GGATC 3 cut(s) 1154, 1190, 1208
AcoI YGGCCR 2 cut(s) 439, 835
AcsI RAATTY 3 cut(s) 347, 813, 932
AcuI CTGAAG 3 cut(s) 247, 587, 701
AfaI GTAC 2 cut(s) 1208, 1268
AfiI CCNNNNNNNGG 3 cut(s) 44, 170, 1081
AflIII ACRYGT 1 cut(s) 1304
AgsI TTSAA 5 cut(s) 560, 1056, 1228, 1257, 1406
AjnI CCWGG 3 cut(s) 145, 691, 920
AluBI AGCT 9 cut(s) 382, 399, 502, 515, 650, 665, 788, 1115, 1283
AluI AGCT 9 cut(s) 382, 399, 502, 515, 650, 665, 788, 1115, 1283
Alw21I GWGCWC 1 cut(s) 308
Alw26I GTCTC 3 cut(s) 170, 248, 858
AlwI GGATC 3 cut(s) 1154, 1190, 1208
AlwNI CAGNNNCTG 1 cut(s) 911
Ama87I CYCGRG 1 cut(s) 1234
AoxI GGCC 4 cut(s) 439, 712, 835, 1083
ApoI RAATTY 3 cut(s) 347, 813, 932
Asp700I GAANNNNTTC 1 cut(s) 260
AspLEI GCGC 1 cut(s) 240
AspS9I GGNCC 2 cut(s) 267, 712
AsuHPI GGTGA 6 cut(s) 92, 940, 953, 1343, 1393, 1459
AsuNHI GCTAGC 1 cut(s) 670
AvaI CYCGRG 1 cut(s) 1234
AvaII GGWCC 1 cut(s) 267
AxyI CCTNAGG 1 cut(s) 1076
BalI TGGCCA 1 cut(s) 441
BanII GRGCYC 1 cut(s) 1419
Bbv12I GWGCWC 1 cut(s) 308
BccI CCATC 4 cut(s) 450, 919, 1126, 1285
BceAI ACGGC 3 cut(s) 225, 850, 1285
BciT130I CCWGG 3 cut(s) 147, 693, 922
BciVI GTATCC 2 cut(s) 611, 892
BclI TGATCA 3 cut(s) 496, 748, 799
BcoDI GTCTC 3 cut(s) 170, 248, 858
BfaI CTAG 8 cut(s) 53, 383, 671, 699, 1112, 1118, 1340, 1480
BfmI CTRYAG 1 cut(s) 104
BfuAI ACCTGC 3 cut(s) 111, 881, 1263
BfuI GTATCC 2 cut(s) 611, 892
BglI GCCNNNNNGGC 1 cut(s) 447
Bme1390I CCNGG 3 cut(s) 147, 693, 922
Bme18I GGWCC 1 cut(s) 267
BmeT110I CYCGRG 1 cut(s) 1234
BmgT120I GGNCC 2 cut(s) 267, 712
BmiI GGNNCC 1 cut(s) 1103
BmrFI CCNGG 3 cut(s) 147, 693, 922
BmsI GCATC 3 cut(s) 1032, 1165, 1326
BmtI GCTAGC 1 cut(s) 674
BoxI GACNNNNGTC 1 cut(s) 290
BpmI CTGGAG 1 cut(s) 129
Bpu10I CCTNAGC 1 cut(s) 1326
Bsa29I ATCGAT 3 cut(s) 1184, 1212, 1386
BsaBI GATNNNNATC 1 cut(s) 801
BsaI GGTCTC 1 cut(s) 170
BsaJI CCNNGG 4 cut(s) 692, 838, 879, 1097
BsaWI WCCGGW 1 cut(s) 1444
BsaXI ACNNNNNCTCC 4 cut(s) 39, 69, 1291, 1321
Bsc4I CCNNNNNNNGG 3 cut(s) 44, 170, 1081
Bse1I ACTGG 2 cut(s) 580, 1029
Bse21I CCTNAGG 1 cut(s) 1076
Bse3DI GCAATG 3 cut(s) 591, 762, 921
Bse8I GATNNNNATC 1 cut(s) 801
BseBI CCWGG 3 cut(s) 147, 693, 922
BseCI ATCGAT 3 cut(s) 1184, 1212, 1386
BseDI CCNNGG 4 cut(s) 692, 838, 879, 1097
BseGI GGATG 4 cut(s) 930, 1296, 1320, 1445
BseJI GATNNNNATC 1 cut(s) 801
BseLI CCNNNNNNNGG 3 cut(s) 44, 170, 1081
BseMI GCAATG 3 cut(s) 591, 762, 921
BseNI ACTGG 2 cut(s) 580, 1029
BseYI CCCAGC 2 cut(s) 42, 525
BshFI GGCC 4 cut(s) 441, 714, 837, 1085
BshVI ATCGAT 3 cut(s) 1184, 1212, 1386
BsiHKAI GWGCWC 1 cut(s) 308
BsiHKCI CYCGRG 1 cut(s) 1234
BsiSI CCGG 1 cut(s) 1445
BslFI GGGAC 2 cut(s) 298, 709
BslI CCNNNNNNNGG 3 cut(s) 44, 170, 1081
BsmAI GTCTC 3 cut(s) 170, 248, 858
BsmBI CGTCTC 1 cut(s) 248
BsmFI GGGAC 2 cut(s) 298, 709
BsnI GGCC 4 cut(s) 441, 714, 837, 1085
Bso31I GGTCTC 1 cut(s) 170
BsoBI CYCGRG 1 cut(s) 1234
Bsp1286I GDGCHC 2 cut(s) 308, 1419
Bsp1407I TGTACA 1 cut(s) 1206
Bsp143I GATC 9 cut(s) 168, 496, 748, 799, 1146, 1195, 1213, 1383, 1387
Bsp19I CCATGG 2 cut(s) 838, 879
BspACI CCGC 2 cut(s) 377, 1437
BspANI GGCC 4 cut(s) 441, 714, 837, 1085
BspDI ATCGAT 3 cut(s) 1184, 1212, 1386
BspHI TCATGA 2 cut(s) 735, 969
BspLI GGNNCC 1 cut(s) 1103
BspMAI CTGCAG 1 cut(s) 108
BspMI ACCTGC 3 cut(s) 111, 881, 1263
BspOI GCTAGC 1 cut(s) 674
BspPI GGATC 3 cut(s) 1154, 1190, 1208
BspQI GCTCTTC 1 cut(s) 1424
BspTNI GGTCTC 1 cut(s) 170
BsrDI GCAATG 3 cut(s) 591, 762, 921
BsrGI TGTACA 1 cut(s) 1206
BsrI ACTGG 2 cut(s) 580, 1029
BssECI CCNNGG 4 cut(s) 692, 838, 879, 1097
BssMI GATC 9 cut(s) 168, 496, 748, 799, 1146, 1195, 1213, 1383, 1387
BssT1I CCWWGG 3 cut(s) 838, 879, 1097
Bst2UI CCWGG 3 cut(s) 147, 693, 922
Bst4CI ACNGT 7 cut(s) 116, 165, 206, 492, 544, 1204, 1453
Bst6I CTCTTC 3 cut(s) 769, 849, 1424
BstAUI TGTACA 1 cut(s) 1206
BstC8I GCNNGC 4 cut(s) 152, 401, 672, 1083
BstDEI CTNAG 3 cut(s) 1076, 1279, 1326
BstDSI CCRYGG 2 cut(s) 838, 879
BstF5I GGATG 4 cut(s) 930, 1296, 1320, 1445
BstHHI GCGC 1 cut(s) 240
BstKTI GATC 9 cut(s) 171, 499, 751, 802, 1149, 1198, 1216, 1386, 1390
BstMAI GTCTC 3 cut(s) 170, 248, 858
BstMBI GATC 9 cut(s) 168, 496, 748, 799, 1146, 1195, 1213, 1383, 1387
BstMWI GCNNNNNNNGC 3 cut(s) 39, 447, 671
BstNI CCWGG 3 cut(s) 147, 693, 922
BstNSI RCATGY 2 cut(s) 293, 1308
BstPAI GACNNNNGTC 1 cut(s) 290
BstSCI CCNGG 3 cut(s) 145, 691, 920
BstSFI CTRYAG 1 cut(s) 104
Bsu15I ATCGAT 3 cut(s) 1184, 1212, 1386
Bsu36I CCTNAGG 1 cut(s) 1076
BsuI GTATCC 2 cut(s) 611, 892
BsuRI GGCC 4 cut(s) 441, 714, 837, 1085
BsuTUI ATCGAT 3 cut(s) 1184, 1212, 1386
BtgI CCRYGG 2 cut(s) 838, 879
BtsCI GGATG 4 cut(s) 930, 1296, 1320, 1445
BtsI GCAGTG 2 cut(s) 113, 909
BtsIMutI CAGTG 6 cut(s) 113, 211, 540, 563, 909, 1022
BveI ACCTGC 3 cut(s) 111, 881, 1263
Cac8I GCNNGC 4 cut(s) 152, 401, 672, 1083
CaiI CAGNNNCTG 1 cut(s) 911
CciI TCATGA 2 cut(s) 735, 969
CfoI GCGC 1 cut(s) 240
Cfr13I GGNCC 2 cut(s) 267, 712
ClaI ATCGAT 3 cut(s) 1184, 1212, 1386
CseI GACGC 1 cut(s) 295
Csp6I GTAC 2 cut(s) 1207, 1267
CviQI GTAC 2 cut(s) 1207, 1267
DdeI CTNAG 3 cut(s) 1076, 1279, 1326
DpnI GATC 9 cut(s) 170, 498, 750, 801, 1148, 1197, 1215, 1385, 1389
DpnII GATC 9 cut(s) 168, 496, 748, 799, 1146, 1195, 1213, 1383, 1387
DrdI GACNNNNNNGTC 1 cut(s) 240
DseDI GACNNNNNNGTC 1 cut(s) 240
EaeI YGGCCR 2 cut(s) 439, 835
Eam1104I CTCTTC 3 cut(s) 769, 849, 1424
EarI CTCTTC 3 cut(s) 769, 849, 1424
Eco130I CCWWGG 3 cut(s) 838, 879, 1097
Eco24I GRGCYC 1 cut(s) 1419
Eco31I GGTCTC 1 cut(s) 170
Eco47I GGWCC 1 cut(s) 267
Eco57I CTGAAG 3 cut(s) 247, 587, 701
Eco81I CCTNAGG 1 cut(s) 1076
Eco88I CYCGRG 1 cut(s) 1234
EcoO109I RGGNCCY 1 cut(s) 712
EcoRII CCWGG 3 cut(s) 145, 691, 920
EcoT14I CCWWGG 3 cut(s) 838, 879, 1097
EcoT38I GRGCYC 1 cut(s) 1419
ErhI CCWWGG 3 cut(s) 838, 879, 1097
Esp3I CGTCTC 1 cut(s) 248
FalI AAGNNNNNCTT 2 cut(s) 966, 998
FaqI GGGAC 2 cut(s) 298, 709
FbaI TGATCA 3 cut(s) 496, 748, 799
FokI GGATG 4 cut(s) 937, 1303, 1327, 1452
FriOI GRGCYC 1 cut(s) 1419
FspBI CTAG 8 cut(s) 53, 383, 671, 699, 1112, 1118, 1340, 1480
GlaI GCGC 1 cut(s) 239
GsaI CCCAGC 2 cut(s) 46, 529
GsuI CTGGAG 1 cut(s) 129
HaeIII GGCC 4 cut(s) 441, 714, 837, 1085
HapII CCGG 1 cut(s) 1445
HgaI GACGC 1 cut(s) 295
HhaI GCGC 1 cut(s) 240
Hin6I GCGC 1 cut(s) 238
HinP1I GCGC 1 cut(s) 238
HincII GTYRAC 2 cut(s) 63, 119
HindII GTYRAC 2 cut(s) 63, 119
HindIII AAGCTT 1 cut(s) 397
HinfI GANTC 6 cut(s) 97, 311, 1070, 1356, 1394, 1456
HpaI GTTAAC 1 cut(s) 63
HpaII CCGG 1 cut(s) 1445
HphI GGTGA 6 cut(s) 92, 940, 953, 1343, 1393, 1459
Hpy166II GTNNAC 3 cut(s) 63, 119, 1207
Hpy188I TCNGA 6 cut(s) 90, 233, 248, 353, 863, 1200
Hpy8I GTNNAC 3 cut(s) 63, 119, 1207
Hpy99I CGWCG 1 cut(s) 1204
HpyAV CCTTC 5 cut(s) 634, 725, 1060, 1130, 1372
HpyCH4III ACNGT 7 cut(s) 116, 165, 206, 492, 544, 1204, 1453
HpyCH4IV ACGT 1 cut(s) 1164
HpyCH4V TGCA 5 cut(s) 106, 637, 890, 914, 1178
HpyF10VI GCNNNNNNNGC 3 cut(s) 39, 447, 671
HpyF3I CTNAG 3 cut(s) 1076, 1279, 1326
HpySE526I ACGT 1 cut(s) 1164
HspAI GCGC 1 cut(s) 238
Ksp22I TGATCA 3 cut(s) 496, 748, 799
KspAI GTTAAC 1 cut(s) 63
Kzo9I GATC 9 cut(s) 168, 496, 748, 799, 1146, 1195, 1213, 1383, 1387
LguI GCTCTTC 1 cut(s) 1424
LmnI GCTCC 1 cut(s) 379
LweI GCATC 3 cut(s) 1032, 1165, 1326
MaeI CTAG 8 cut(s) 53, 383, 671, 699, 1112, 1118, 1340, 1480
MaeII ACGT 1 cut(s) 1164
MaeIII GTNAC 4 cut(s) 98, 1360, 1447, 1453
MalI GATC 9 cut(s) 170, 498, 750, 801, 1148, 1197, 1215, 1385, 1389
MboI GATC 9 cut(s) 168, 496, 748, 799, 1146, 1195, 1213, 1383, 1387
MboII GAAGA 9 cut(s) 580, 739, 783, 786, 806, 866, 1340, 1411, 1481
MhlI GDGCHC 2 cut(s) 308, 1419
MlsI TGGCCA 1 cut(s) 441
MluCI AATT 7 cut(s) 324, 347, 466, 744, 813, 885, 932
MluNI TGGCCA 1 cut(s) 441
MlyI GAGTC 4 cut(s) 106, 320, 1350, 1450
MmeI TCCRAC 2 cut(s) 606, 1223
Mox20I TGGCCA 1 cut(s) 441
MroXI GAANNNNTTC 1 cut(s) 260
MscI TGGCCA 1 cut(s) 441
MseI TTAA 9 cut(s) 62, 71, 201, 602, 683, 782, 875, 1035, 1430
MslI CAYNNNNRTG 3 cut(s) 657, 914, 968
Msp20I TGGCCA 1 cut(s) 441
MspI CCGG 1 cut(s) 1445
MspR9I CCNGG 3 cut(s) 147, 693, 922
MvaI CCWGG 3 cut(s) 147, 693, 922
MwoI GCNNNNNNNGC 3 cut(s) 39, 447, 671
NcoI CCATGG 2 cut(s) 838, 879
NdeII GATC 9 cut(s) 168, 496, 748, 799, 1146, 1195, 1213, 1383, 1387
NheI GCTAGC 1 cut(s) 670
NlaIV GGNNCC 1 cut(s) 1103
NmuCI GTSAC 4 cut(s) 98, 1360, 1447, 1453
NspI RCATGY 2 cut(s) 293, 1308
PaeR7I CTCGAG 1 cut(s) 1234
PagI TCATGA 2 cut(s) 735, 969
PaqCI CACCTGC 1 cut(s) 111
PciI ACATGT 1 cut(s) 1304
PciSI GCTCTTC 1 cut(s) 1424
PdmI GAANNNNTTC 1 cut(s) 260
PfeI GAWTC 2 cut(s) 1070, 1394
PleI GAGTC 4 cut(s) 105, 319, 1350, 1450
PpsI GAGTC 4 cut(s) 105, 319, 1350, 1450
PscI ACATGT 1 cut(s) 1304
PshAI GACNNNNGTC 1 cut(s) 290
Psp6I CCWGG 3 cut(s) 145, 691, 920
PspFI CCCAGC 2 cut(s) 42, 525
PspGI CCWGG 3 cut(s) 145, 691, 920
PspN4I GGNNCC 1 cut(s) 1103
PspPI GGNCC 2 cut(s) 267, 712
PspXI VCTCGAGB 1 cut(s) 1234
PsrI GAACNNNNNNTAC 2 cut(s) 1259, 1291
PstI CTGCAG 1 cut(s) 108
PstNI CAGNNNCTG 1 cut(s) 911
RsaI GTAC 2 cut(s) 1208, 1268
RsaNI GTAC 2 cut(s) 1207, 1267
RseI CAYNNNNRTG 3 cut(s) 657, 914, 968
SapI GCTCTTC 1 cut(s) 1424
SaqAI TTAA 9 cut(s) 62, 71, 201, 602, 683, 782, 875, 1035, 1430
Sau3AI GATC 9 cut(s) 168, 496, 748, 799, 1146, 1195, 1213, 1383, 1387
Sau96I GGNCC 2 cut(s) 267, 712
SchI GAGTC 4 cut(s) 106, 320, 1350, 1450
ScrFI CCNGG 3 cut(s) 147, 693, 922
SduI GDGCHC 2 cut(s) 308, 1419
SfaNI GCATC 3 cut(s) 1032, 1165, 1326
SfcI CTRYAG 1 cut(s) 104
Sfr274I CTCGAG 1 cut(s) 1234
SinI GGWCC 1 cut(s) 267
SlaI CTCGAG 1 cut(s) 1234
SmiMI CAYNNNNRTG 3 cut(s) 657, 914, 968
SmlI CTYRAG 1 cut(s) 1234
SmoI CTYRAG 1 cut(s) 1234
Sse9I AATT 7 cut(s) 324, 347, 466, 744, 813, 885, 932
SsiI CCGC 2 cut(s) 377, 1437
SspMI CTAG 8 cut(s) 53, 383, 671, 699, 1112, 1118, 1340, 1480
StyD4I CCNGG 3 cut(s) 145, 691, 920
StyI CCWWGG 3 cut(s) 838, 879, 1097
TaaI ACNGT 7 cut(s) 116, 165, 206, 492, 544, 1204, 1453
TaiI ACGT 1 cut(s) 1167
TaqI TCGA 8 cut(s) 8, 302, 510, 1184, 1212, 1235, 1386, 1397
TasI AATT 7 cut(s) 324, 347, 466, 744, 813, 885, 932
TatI WGTACW 1 cut(s) 1206
TfiI GAWTC 2 cut(s) 1070, 1394
Tru1I TTAA 9 cut(s) 62, 71, 201, 602, 683, 782, 875, 1035, 1430
Tru9I TTAA 9 cut(s) 62, 71, 201, 602, 683, 782, 875, 1035, 1430
TscAI CASTG 6 cut(s) 113, 211, 547, 570, 916, 1029
TseFI GTSAC 4 cut(s) 98, 1360, 1447, 1453
Tsp45I GTSAC 4 cut(s) 98, 1360, 1447, 1453
TspDTI ATGAA 9 cut(s) 67, 178, 472, 807, 840, 867, 986, 1263, 1331
TspGWI ACGGA 1 cut(s) 323
TspRI CASTG 6 cut(s) 113, 211, 547, 570, 916, 1029
VpaK11BI GGWCC 1 cut(s) 267
XapI RAATTY 3 cut(s) 347, 813, 932
XbaI TCTAGA 1 cut(s) 1117
XceI RCATGY 2 cut(s) 293, 1308
XhoI CTCGAG 1 cut(s) 1234
XmnI GAANNNNTTC 1 cut(s) 260
XspI CTAG 8 cut(s) 53, 383, 671, 699, 1112, 1118, 1340, 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.