Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015005

Physical Location & Seq

Genomic Coordinates Reverse (-)

7600805 .. 7604215

Gene Structure 3411 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G21651.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2436 bp

ATGGAGGAACCGGAGTGTCCGGTGTGTCTACAGTCTTACGACGGCGAGTCTACTGTCCCGCGCGTACTCGCCTGCGGACACACGGCGTGCGAAGAATGCTTAACAAATCTACCCAAGAAGTTTCCGGACACAATCCGATGTCCTGCTTGCACCGTTCTCGTCAAGTTTCCACCTCAAGGACCATCAGCTCTCCCCAAAAACATTGATCTTCTCAGATTGTTCCCTTCGATTTCGAAGCTTAAGCTGGAACCTGGCCGGAATTTTGAAAAAGTCGTTGAATTTGTCACTCGATCATGGTCCGACGACTTTTACGCCACTTGGAAGGATCGGATTCTAGTGCACGACGCCGTTTCCGTGGAAATTAGGGAGAGTGAAAGTAGTGATTTTGATTCATCTTCGCGTTTATGTGGAAGTCTGAGGGATGATTCGAAGGTGAGTCTTTTACGGGTTGCTTCGTTCGAGCATGGTGATTGTGATTCTGTCCTCAAGTATAGTTATGTCCAGAGGATGATGAGTTGTCTGTGGGGTATGCGAGAGGAGGAAAGAGATGAGCTTGATGCGATCATCTCTGTTAAACAGAGAGGTGTTTCTAAAGTTTTTGGCTTGTGGGGTGATTTGAAGAATGGTGTTTTGTATTTAGTGGGTGAAAAGCTCATTGGATTTTCGTTGGAGGAGTTTGATAGCCTCGAAGATGAGACTTTACGTTTAGGAATAATTGGTATGCAAATATGTGAGGCACTACTTAATTTGCATAAGGAAGGGTTGATCACAGGCTGTTTGAGTGTTTCTTGTGTGAAGTTTGACGAATATGAGAATGCTTATGTTGATTTGATTGAGTTGATTGAAACTGGAAGGAATGTGTATCGAATTATCGCTGAAGAAACTAGCTCTTTGAGAAAACCAGTTGGTGCTTCGGAAATGGGTTTGATTTTTGTTGGGTTACAACAGAAGGGGATTTTTATTAGCTCAGAGGTGTTGTTTGAATTTTTGAAAGAACAGAATATGTTAATAAAAAATACCAGCTCAAAATCTTTTGTTTCACATAACTCTGATGTTTGGCCAGTGTGTTTTCTTCTCCTCAAGCTTCGTCTTGGAAAACGGTGTACCGAGGAGTTTATTGAAAGTGTGAATTGTGTGGATGGAAAAGGCTGTGAAGAGGGTATTGAGGATATCTTGGTGCTATACACAGGTATTACGGAGAAACTAAGTTTGGAATCTGAACTCCAAGGGAAGTTTAAATCGATGGTTGAAATTCTTCGTCAATGTTGCTGTCTTGATCCTCAGGCACGTCCCGTTTTGACTGATCTATGGAAATGCATCAGGGAGCTGGTCATGAAACCTAGGTTCAATTCTATGAGTAGATTGCATAAGACGATTTATGGGAAAAGGAAACAGTTCTGTTTGGCTCAAAGTGAATTATGTCGCCTGGTAGAAGTGGAATCCAAAGAAGTGGACAAAGAGTTGCCTGGAATGAAAATTGGCGATGAAGCAGAGGAGGGTAAGGTTGACATAGATTTTCCGGGGAGAGTCTCAGAAGGAAAGGTGAGATCTAAAGACATGCGGGGACACCAAGACTCTGTCACAGGTTTAGCCGTTGGAGGTGGGTTTCTCTTCAGCTCTTCATATGATAGAACTATCCTTATATGGTCTCTGAAGGACTTCTCCCATGTGCATACATTTAAAGGTCATCAGGATAAAGTAATGGCCTTGATACACATCGAGGGAACAGAACCAGTATGTGTTAGTGGCGATGGTGGAGGAGGTATCTTTGTATGGAGCACTACTTTTCCTCTGGAAGAACAGCCGCTAAGAAAGTGGTATGAGCCAAAAGACTGGCGATATACTGGCATTCATGCATTGGCATACTCAGAATATGGGCATGTGTACACTGGCAGTGGAGATAACACTATCAAAGCTTGGTCACTGCAAGATGGAAGCCTGCTTTGCACTATGAGTGGTCATAAATCTGTAGTCTCAACGCTTGTTGTGGTAAATGGAGTACTATACAGTGGAAGTTGGGATGGAACCGTTCGTTTGTGGAGTCTAAGTGACAACAGTTTGTTGACAGTGTTGGGGGAAGAGACTCCAGGTATTGTAAGATCTATTCTGTCTCTAGCTGCAGACGATCAAACTCTAGTTGCAGCTTATCAAAACGGAGATATACAGATATGGAGGGATGATACATTGATGAAGTCAATGAAAATACAGAATGGCGCAATCCTCAGCATTGCCGTGAATGGTAAATGGCTATTCACTGGAGGTTGGGACAAAACCATCAATGTACAGGAATTGTCAGGAGATGAGATATCAGTAAACTGTGCTCACGTTGGTTCAATCCCAGGTTCATCAGTAATCACATCTTTGTTATATTGGGAAGGCAAGCTCTTTGCAGGGTTTGCAGATAAAACCATTAAGGTATACTATTTTGGACGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005826 GO:0005856 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007010 GO:0007049 GO:0008092 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0015629 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016905 GO:0017022 GO:0017076 GO:0018107 GO:0018193 GO:0018210 GO:0019538 GO:0022402 GO:0022411 GO:0030029 GO:0030036 GO:0030554 GO:0030863 GO:0030864 GO:0031033 GO:0031035 GO:0031037 GO:0031038 GO:0032153 GO:0032155 GO:0032553 GO:0032555 GO:0032559 GO:0032984 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0043624 GO:0043933 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0045159 GO:0046777 GO:0051301 GO:0061640 GO:0070938 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0099568 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903047

KEGG Pathways

Metabolic & Signaling

ko02024 ko03060 ko03070 map02024 map03060 map03070

Pfam Domains

Protein Families

WD40 zf-RING_2 zf-RING_UBOX

Protein Analysis

811

Amino Acids

90.63

Weight (kDa)

5.26

Isoelectric Point (pI)

44.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_5	PF14634	5 - 50	2.3e-07	zinc-RING finger domain
zf-RING_2	PF13639	5 - 50	3e-06	Ring finger domain
zf-RING_UBOX	PF13445	6 - 48	1.1e-08	RING-type zinc-finger
WDR55	PF24796	510 - 724	1.4e-08	WDR55
Beta-prop_THOC3	PF25174	514 - 737	1.3e-16	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	517 - 594	6.1e-06	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	519 - 593	7.4e-07	WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	522 - 594	9.7e-06	TEP-1 second beta-propeller
Beta-prop_EML	PF23409	540 - 716	6.5e-07	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR5	PF25175	615 - 764	2.8e-13	WDR5 beta-propeller domain
WD40_Prp19	PF24814	615 - 716	3.2e-08	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	620 - 688	4.3e-07	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	621 - 761	1.2e-12	WDR3 first beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21651
fragaria_vesca	FvH4_2g27740
prunus_persica	Prupe.1G490500_v2.0.a1 Prupe.1G490500_v2.0.a1 Prupe.1G490500_v2.0.a1
pyrus_communis	pycom15g30580
rosa_chinensis	RchiOBHm_Chr6g0296591
rosa_laevigata	RLG00000011677
rosa_multiflora	Rmu_sc0001741.1_g000020
rosa_roxburghii	Rroxscaffold_6G00390100 Rroxscaffold_7G00178750
rosa_rugosa	Rorug06G0263600
rosa_samantha	Rh6BG383500 Rh6CG388600 Rh6DG376000
rosa_wichuraiana	Rw6G032710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	28, 50, 2418
AccII	CGCG	3 cut(s)	61, 63, 400
AccIII	TCCGGA	1 cut(s)	124
AciI	CCGC	4 cut(s)	59, 75, 1561, 1805
AclWI	GGATC	2 cut(s)	333, 1271
AcoI	YGGCCR	2 cut(s)	253, 1058
AcsI	RAATTY	4 cut(s)	259, 278, 983, 1251
AcuI	CTGAAG	3 cut(s)	897, 1597, 1673
AcyI	GRCGYC	1 cut(s)	345
AdeI	CACNNNGTG	1 cut(s)	87
AfaI	GTAC	5 cut(s)	66, 1105, 1886, 2001, 2283
AfiI	CCNNNNNNNGG	1 cut(s)	176
AflII	CTTAAG	1 cut(s)	239
AhdI	GACNNNNNGTC	1 cut(s)	46
AjiI	CACGTC	1 cut(s)	1289
AjnI	CCWGG	5 cut(s)	250, 1425, 1465, 2086, 2338
AjuI	GAANNNNNNNTTGG	4 cut(s)	639, 671, 1193, 1225
Alw21I	GWGCWC	3 cut(s)	342, 1781, 2323
Alw26I	GTCTC	6 cut(s)	689, 1534, 1653, 1978, 2075, 2115
Alw44I	GTGCAC	1 cut(s)	338
AlwI	GGATC	2 cut(s)	333, 1271
Aor13HI	TCCGGA	1 cut(s)	124
AoxI	GGCC	3 cut(s)	253, 1058, 1704
ApaLI	GTGCAC	1 cut(s)	338
ApeKI	GCWGC	2 cut(s)	2117, 2141
ApoI	RAATTY	4 cut(s)	259, 278, 983, 1251
Asp700I	GAANNNNTTC	3 cut(s)	1254, 1394, 1658
AspA2I	CCTAGG	1 cut(s)	1340
AspLEI	GCGC	2 cut(s)	63, 2216
AspS9I	GGNCC	2 cut(s)	179, 297
AsuC2I	CCSGG	1 cut(s)	1521
AsuHPI	GGTGA	5 cut(s)	445, 479, 623, 656, 1555
AsuII	TTCGAA	2 cut(s)	233, 428
AvaII	GGWCC	2 cut(s)	179, 297
AvrII	CCTAGG	1 cut(s)	1340
AxyI	CCTNAGG	1 cut(s)	1281
BaeGI	GKGCMC	1 cut(s)	342
BalI	TGGCCA	1 cut(s)	1060
Bbv12I	GWGCWC	3 cut(s)	342, 1781, 2323
BbvCI	CCTCAGC	1 cut(s)	2222
BbvI	GCAGC	2 cut(s)	2104, 2153
BccI	CCATC	7 cut(s)	190, 1133, 1237, 1745, 1925, 2015, 2282
BceAI	ACGGC	5 cut(s)	58, 99, 332, 1577, 2216
BcgI	CGANNNNNNTGC	2 cut(s)	139, 173
BciT130I	CCWGG	5 cut(s)	252, 1427, 1467, 2088, 2340
BclI	TGATCA	1 cut(s)	765
BcnI	CCSGG	1 cut(s)	1521
BcoDI	GTCTC	6 cut(s)	689, 1534, 1653, 1978, 2075, 2115
BfaI	CTAG	5 cut(s)	335, 885, 1341, 2114, 2135
BfmI	CTRYAG	3 cut(s)	29, 1968, 2118
BfrI	CTTAAG	1 cut(s)	239
BglII	AGATCT	2 cut(s)	1547, 2099
BisI	GCNGC	3 cut(s)	1805, 2118, 2142
BlnI	CCTAGG	1 cut(s)	1340
BlsI	GCNGC	3 cut(s)	1806, 2119, 2143
BmcAI	AGTACT	1 cut(s)	2001
Bme1390I	CCNGG	6 cut(s)	252, 1427, 1467, 1521, 2088, 2340
Bme18I	GGWCC	2 cut(s)	179, 297
BmeRI	GACNNNNNGTC	1 cut(s)	46
BmgBI	CACGTC	1 cut(s)	1289
BmgT120I	GGNCC	2 cut(s)	179, 297
BmiI	GGNNCC	3 cut(s)	9, 249, 2026
BmrFI	CCNGG	6 cut(s)	252, 1427, 1467, 1521, 2088, 2340
BmsI	GCATC	2 cut(s)	547, 1326
BpmI	CTGGAG	2 cut(s)	2070, 2277
Bpu10I	CCTNAGC	1 cut(s)	2222
Bpu14I	TTCGAA	2 cut(s)	233, 428
BpuEI	CTTGAG	3 cut(s)	159, 470, 1064
BpuMI	CCSGG	1 cut(s)	1521
Bsa29I	ATCGAT	1 cut(s)	1241
BsaBI	GATNNNNATC	1 cut(s)	1715
BsaHI	GRCGYC	1 cut(s)	345
BsaI	GGTCTC	1 cut(s)	1653
BsaJI	CCNNGG	6 cut(s)	354, 1107, 1225, 1340, 1520, 2338
BsaWI	WCCGGW	3 cut(s)	10, 19, 124
BsaXI	ACNNNNNCTCC	2 cut(s)	2032, 2062
Bsc4I	CCNNNNNNNGG	1 cut(s)	176
Bse1I	ACTGG	8 cut(s)	853, 902, 1061, 1733, 1838, 1849, 1894, 2260
Bse21I	CCTNAGG	1 cut(s)	1281
Bse3DI	GCAATG	1 cut(s)	2226
Bse8I	GATNNNNATC	1 cut(s)	1715
BseAI	TCCGGA	1 cut(s)	124
BseBI	CCWGG	5 cut(s)	252, 1427, 1467, 2088, 2340
BseCI	ATCGAT	1 cut(s)	1241
BseDI	CCNNGG	6 cut(s)	354, 1107, 1225, 1340, 1520, 2338
BseGI	GGATG	5 cut(s)	427, 513, 1144, 2026, 2182
BseJI	GATNNNNATC	1 cut(s)	1715
BseLI	CCNNNNNNNGG	1 cut(s)	176
BseMI	GCAATG	1 cut(s)	2226
BseMII	CTCAG	7 cut(s)	226, 407, 981, 1295, 1545, 1881, 2236
BseNI	ACTGG	8 cut(s)	853, 902, 1061, 1733, 1838, 1849, 1894, 2260
BseRI	GAGGAG	6 cut(s)	551, 686, 1067, 1124, 1508, 1773
BseSI	GKGCMC	1 cut(s)	342
BseXI	GCAGC	2 cut(s)	2104, 2153
Bsh1236I	CGCG	3 cut(s)	61, 63, 400
BshFI	GGCC	3 cut(s)	255, 1060, 1706
BshVI	ATCGAT	1 cut(s)	1241
BsiHKAI	GWGCWC	3 cut(s)	342, 1781, 2323
BsiSI	CCGG	5 cut(s)	11, 20, 125, 256, 1520
BslFI	GGGAC	4 cut(s)	41, 1275, 1578, 2279
BslI	CCNNNNNNNGG	1 cut(s)	176
BsmAI	GTCTC	6 cut(s)	689, 1534, 1653, 1978, 2075, 2115
BsmFI	GGGAC	4 cut(s)	41, 1275, 1578, 2279
BsmI	GAATGC	3 cut(s)	101, 820, 1848
BsnI	GGCC	3 cut(s)	255, 1060, 1706
Bso31I	GGTCTC	1 cut(s)	1653
Bsp119I	TTCGAA	2 cut(s)	233, 428
Bsp1286I	GDGCHC	3 cut(s)	342, 1781, 2323
Bsp13I	TCCGGA	1 cut(s)	124
Bsp1407I	TGTACA	2 cut(s)	1884, 2281
BspACI	CCGC	4 cut(s)	59, 75, 1561, 1805
BspANI	GGCC	3 cut(s)	255, 1060, 1706
BspCNI	CTCAG	7 cut(s)	225, 408, 980, 1294, 1544, 1880, 2235
BspDI	ATCGAT	1 cut(s)	1241
BspEI	TCCGGA	1 cut(s)	124
BspFNI	CGCG	3 cut(s)	61, 63, 400
BspHI	TCATGA	1 cut(s)	1332
BspLI	GGNNCC	3 cut(s)	9, 249, 2026
BspMAI	CTGCAG	1 cut(s)	2122
BspPI	GGATC	2 cut(s)	333, 1271
BspQI	GCTCTTC	1 cut(s)	1624
BspT104I	TTCGAA	2 cut(s)	233, 428
BspTI	CTTAAG	1 cut(s)	239
BspTNI	GGTCTC	1 cut(s)	1653
BsrDI	GCAATG	1 cut(s)	2226
BsrGI	TGTACA	2 cut(s)	1884, 2281
BsrI	ACTGG	8 cut(s)	853, 902, 1061, 1733, 1838, 1849, 1894, 2260
BssECI	CCNNGG	6 cut(s)	354, 1107, 1225, 1340, 1520, 2338
BssNAI	GTATAC	1 cut(s)	2419
BssNI	GRCGYC	1 cut(s)	345
BssT1I	CCWWGG	2 cut(s)	1225, 1340
Bst1107I	GTATAC	1 cut(s)	2419
Bst2UI	CCWGG	5 cut(s)	252, 1427, 1467, 2088, 2340
Bst6I	CTCTTC	4 cut(s)	1149, 1616, 1624, 2073
BstACI	GRCGYC	1 cut(s)	345
BstAFI	CTTAAG	1 cut(s)	239
BstAPI	GCANNNNNTGC	1 cut(s)	2396
BstAUI	TGTACA	2 cut(s)	1884, 2281
BstBI	TTCGAA	2 cut(s)	233, 428
BstC8I	GCNNGC	5 cut(s)	73, 88, 148, 1940, 2381
BstDSI	CCRYGG	1 cut(s)	354
BstF5I	GGATG	5 cut(s)	427, 513, 1144, 2026, 2182
BstFNI	CGCG	3 cut(s)	61, 63, 400
BstHHI	GCGC	2 cut(s)	63, 2216
BstMAI	GTCTC	6 cut(s)	689, 1534, 1653, 1978, 2075, 2115
BstMWI	GCNNNNNNNGC	3 cut(s)	96, 1944, 2396
BstNI	CCWGG	5 cut(s)	252, 1427, 1467, 2088, 2340
BstNSI	RCATGY	2 cut(s)	1561, 1883
BstSCI	CCNGG	6 cut(s)	250, 1425, 1465, 1519, 2086, 2338
BstSFI	CTRYAG	3 cut(s)	29, 1968, 2118
BstSLI	GKGCMC	1 cut(s)	342
BstUI	CGCG	3 cut(s)	61, 63, 400
BstV1I	GCAGC	2 cut(s)	2104, 2153
BstX2I	RGATCY	2 cut(s)	1547, 2099
BstXI	CCANNNNNNTGG	2 cut(s)	1450, 1833
BstYI	RGATCY	2 cut(s)	1547, 2099
BstZ17I	GTATAC	1 cut(s)	2419
Bsu15I	ATCGAT	1 cut(s)	1241
Bsu36I	CCTNAGG	1 cut(s)	1281
BsuRI	GGCC	3 cut(s)	255, 1060, 1706
BsuTUI	ATCGAT	1 cut(s)	1241
BtgI	CCRYGG	1 cut(s)	354
BtgZI	GCGATG	2 cut(s)	1497, 1764
BtrI	CACGTC	1 cut(s)	1289
BtsCI	GGATG	5 cut(s)	427, 513, 1144, 2026, 2182
BtsI	GCAGTG	2 cut(s)	1900, 1922
BtsIMutI	CAGTG	7 cut(s)	1068, 1887, 1900, 1922, 2014, 2073, 2253
Cac8I	GCNNGC	5 cut(s)	73, 88, 148, 1940, 2381
CciI	TCATGA	1 cut(s)	1332
CfoI	GCGC	2 cut(s)	63, 2216
Cfr13I	GGNCC	2 cut(s)	179, 297
ClaI	ATCGAT	1 cut(s)	1241
CseI	GACGC	1 cut(s)	353
Csp6I	GTAC	5 cut(s)	65, 1104, 1885, 2000, 2282
CviAII	CATG	7 cut(s)	294, 464, 1333, 1558, 1667, 1853, 1880
CviQI	GTAC	5 cut(s)	65, 1104, 1885, 2000, 2282
DraI	TTTAAA	2 cut(s)	1237, 1681
DraIII	CACNNNGTG	1 cut(s)	87
DriI	GACNNNNNGTC	1 cut(s)	46
EaeI	YGGCCR	2 cut(s)	253, 1058
Eam1104I	CTCTTC	4 cut(s)	1149, 1616, 1624, 2073
Eam1105I	GACNNNNNGTC	1 cut(s)	46
EarI	CTCTTC	4 cut(s)	1149, 1616, 1624, 2073
Eco130I	CCWWGG	2 cut(s)	1225, 1340
Eco31I	GGTCTC	1 cut(s)	1653
Eco32I	GATATC	2 cut(s)	1171, 2307
Eco47I	GGWCC	2 cut(s)	179, 297
Eco57I	CTGAAG	3 cut(s)	897, 1597, 1673
Eco81I	CCTNAGG	1 cut(s)	1281
EcoRII	CCWGG	5 cut(s)	250, 1425, 1465, 2086, 2338
EcoRV	GATATC	2 cut(s)	1171, 2307
EcoT14I	CCWWGG	2 cut(s)	1225, 1340
EcoT22I	ATGCAT	2 cut(s)	1319, 1858
ErhI	CCWWGG	2 cut(s)	1225, 1340
FaeI	CATG	7 cut(s)	297, 467, 1336, 1561, 1670, 1856, 1883
FaqI	GGGAC	4 cut(s)	41, 1275, 1578, 2279
FatI	CATG	7 cut(s)	293, 463, 1332, 1557, 1666, 1852, 1879
FauI	CCCGC	2 cut(s)	66, 1554
FauNDI	CATATG	1 cut(s)	1624
FbaI	TGATCA	1 cut(s)	765
FblI	GTMKAC	3 cut(s)	28, 50, 2418
Fnu4HI	GCNGC	3 cut(s)	1805, 2118, 2142
FokI	GGATG	5 cut(s)	434, 520, 1151, 2033, 2189
Fsp4HI	GCNGC	3 cut(s)	1805, 2118, 2142
FspBI	CTAG	5 cut(s)	335, 885, 1341, 2114, 2135
GlaI	GCGC	2 cut(s)	62, 2215
GluI	GCNGC	3 cut(s)	1805, 2118, 2142
GsuI	CTGGAG	2 cut(s)	2070, 2277
HaeIII	GGCC	3 cut(s)	255, 1060, 1706
HapII	CCGG	5 cut(s)	11, 20, 125, 256, 1520
HgaI	GACGC	1 cut(s)	353
HhaI	GCGC	2 cut(s)	63, 2216
Hin1I	GRCGYC	1 cut(s)	345
Hin1II	CATG	7 cut(s)	297, 467, 1336, 1561, 1670, 1856, 1883
Hin6I	GCGC	2 cut(s)	61, 2214
HinP1I	GCGC	2 cut(s)	61, 2214
HincII	GTYRAC	2 cut(s)	1507, 2064
HindII	GTYRAC	2 cut(s)	1507, 2064
HindIII	AAGCTT	3 cut(s)	236, 1082, 1914
HpaII	CCGG	5 cut(s)	11, 20, 125, 256, 1520
HphI	GGTGA	5 cut(s)	445, 479, 623, 656, 1555
Hpy188III	TCNNGA	7 cut(s)	125, 502, 1274, 1333, 1691, 1793, 2295
Hpy99I	CGWCG	3 cut(s)	44, 305, 347
HpyAV	CCTTC	9 cut(s)	234, 316, 424, 752, 846, 943, 1529, 1648, 2369
HpyCH4IV	ACGT	3 cut(s)	703, 1288, 2325
HpyF10VI	GCNNNNNNNGC	3 cut(s)	96, 1944, 2396
HpySE526I	ACGT	3 cut(s)	703, 1288, 2325
Hsp92I	GRCGYC	1 cut(s)	345
Hsp92II	CATG	7 cut(s)	297, 467, 1336, 1561, 1670, 1856, 1883
HspAI	GCGC	2 cut(s)	61, 2214
Kpn2I	TCCGGA	1 cut(s)	124
Ksp22I	TGATCA	1 cut(s)	765
LguI	GCTCTTC	1 cut(s)	1624
LmnI	GCTCC	2 cut(s)	1324, 1776
Lsp1109I	GCAGC	2 cut(s)	2104, 2153
LweI	GCATC	2 cut(s)	547, 1326
MaeI	CTAG	5 cut(s)	335, 885, 1341, 2114, 2135
MaeII	ACGT	3 cut(s)	703, 1288, 2325
MaeIII	GTNAC	5 cut(s)	283, 939, 1579, 1920, 2048
MflI	RGATCY	2 cut(s)	1547, 2099
MhlI	GDGCHC	3 cut(s)	342, 1781, 2323
MlsI	TGGCCA	1 cut(s)	1060
MluNI	TGGCCA	1 cut(s)	1060
MlyI	GAGTC	6 cut(s)	56, 445, 1536, 1568, 2050, 2077
MmeI	TCCRAC	3 cut(s)	324, 648, 1576
Mox20I	TGGCCA	1 cut(s)	1060
Mph1103I	ATGCAT	2 cut(s)	1319, 1858
MroI	TCCGGA	1 cut(s)	124
MroXI	GAANNNNTTC	3 cut(s)	1254, 1394, 1658
MscI	TGGCCA	1 cut(s)	1060
MseI	TTAA	8 cut(s)	101, 240, 573, 744, 1007, 1236, 1680, 2412
MslI	CAYNNNNRTG	1 cut(s)	2231
Msp20I	TGGCCA	1 cut(s)	1060
MspCI	CTTAAG	1 cut(s)	239
MspI	CCGG	5 cut(s)	11, 20, 125, 256, 1520
MspR9I	CCNGG	6 cut(s)	252, 1427, 1467, 1521, 2088, 2340
Mva1269I	GAATGC	3 cut(s)	101, 820, 1848
MvaI	CCWGG	5 cut(s)	252, 1427, 1467, 2088, 2340
MvnI	CGCG	3 cut(s)	61, 63, 400
MwoI	GCNNNNNNNGC	3 cut(s)	96, 1944, 2396
NciI	CCSGG	1 cut(s)	1521
NdeI	CATATG	1 cut(s)	1624
NlaIII	CATG	7 cut(s)	297, 467, 1336, 1561, 1670, 1856, 1883
NlaIV	GGNNCC	3 cut(s)	9, 249, 2026
NmuCI	GTSAC	4 cut(s)	283, 1579, 1920, 2048
NsiI	ATGCAT	2 cut(s)	1319, 1858
NspI	RCATGY	2 cut(s)	1561, 1883
NspV	TTCGAA	2 cut(s)	233, 428
PagI	TCATGA	1 cut(s)	1332
PciSI	GCTCTTC	1 cut(s)	1624
PcsI	WCGNNNNNNNCGW	1 cut(s)	351
PctI	GAATGC	3 cut(s)	101, 820, 1848
PdmI	GAANNNNTTC	3 cut(s)	1254, 1394, 1658
PfeI	GAWTC	6 cut(s)	331, 389, 425, 476, 1214, 1439
PflFI	GACNNNGTC	1 cut(s)	1577
PkrI	GCNGC	3 cut(s)	1806, 2119, 2143
PleI	GAGTC	6 cut(s)	55, 444, 1535, 1568, 2049, 2077
PpsI	GAGTC	6 cut(s)	55, 444, 1535, 1568, 2049, 2077
Psp6I	CCWGG	5 cut(s)	250, 1425, 1465, 2086, 2338
PspGI	CCWGG	5 cut(s)	250, 1425, 1465, 2086, 2338
PspN4I	GGNNCC	3 cut(s)	9, 249, 2026
PspPI	GGNCC	2 cut(s)	179, 297
PstI	CTGCAG	1 cut(s)	2122
PsuI	RGATCY	2 cut(s)	1547, 2099
PsyI	GACNNNGTC	1 cut(s)	1577
RsaI	GTAC	5 cut(s)	66, 1105, 1886, 2001, 2283
RsaNI	GTAC	5 cut(s)	65, 1104, 1885, 2000, 2282
RseI	CAYNNNNRTG	1 cut(s)	2231
SapI	GCTCTTC	1 cut(s)	1624
SaqAI	TTAA	8 cut(s)	101, 240, 573, 744, 1007, 1236, 1680, 2412
SatI	GCNGC	3 cut(s)	1805, 2118, 2142
Sau96I	GGNCC	2 cut(s)	179, 297
ScaI	AGTACT	1 cut(s)	2001
SchI	GAGTC	6 cut(s)	56, 445, 1536, 1568, 2050, 2077
ScrFI	CCNGG	6 cut(s)	252, 1427, 1467, 1521, 2088, 2340
SduI	GDGCHC	3 cut(s)	342, 1781, 2323
SfaNI	GCATC	2 cut(s)	547, 1326
SfcI	CTRYAG	3 cut(s)	29, 1968, 2118
SfuI	TTCGAA	2 cut(s)	233, 428
SinI	GGWCC	2 cut(s)	179, 297
SmiMI	CAYNNNNRTG	1 cut(s)	2231
SmlI	CTYRAG	4 cut(s)	174, 239, 485, 1079
SmoI	CTYRAG	4 cut(s)	174, 239, 485, 1079
SsiI	CCGC	4 cut(s)	59, 75, 1561, 1805
SspMI	CTAG	5 cut(s)	335, 885, 1341, 2114, 2135
StyD4I	CCNGG	6 cut(s)	250, 1425, 1465, 1519, 2086, 2338
StyI	CCWWGG	2 cut(s)	1225, 1340
TaiI	ACGT	3 cut(s)	706, 1291, 2328
TaqI	TCGA	9 cut(s)	227, 233, 289, 428, 459, 687, 865, 1241, 1719
TatI	WGTACW	3 cut(s)	1884, 1999, 2281
TauI	GCSGC	1 cut(s)	1807
TfiI	GAWTC	6 cut(s)	331, 389, 425, 476, 1214, 1439
Tru1I	TTAA	8 cut(s)	101, 240, 573, 744, 1007, 1236, 1680, 2412
Tru9I	TTAA	8 cut(s)	101, 240, 573, 744, 1007, 1236, 1680, 2412
TscAI	CASTG	7 cut(s)	1068, 1894, 1900, 1929, 2014, 2073, 2260
TseFI	GTSAC	4 cut(s)	283, 1579, 1920, 2048
TseI	GCWGC	2 cut(s)	2117, 2141
Tsp45I	GTSAC	4 cut(s)	283, 1579, 1920, 2048
TspDTI	ATGAA	9 cut(s)	381, 1349, 1487, 1500, 1611, 1841, 2204, 2213, 2334
TspGWI	ACGGA	3 cut(s)	343, 1211, 2169
TspRI	CASTG	7 cut(s)	1068, 1894, 1900, 1929, 2014, 2073, 2260
Tth111I	GACNNNGTC	1 cut(s)	1577
Vha464I	CTTAAG	1 cut(s)	239
VneI	GTGCAC	1 cut(s)	338
VpaK11BI	GGWCC	2 cut(s)	179, 297
XapI	RAATTY	4 cut(s)	259, 278, 983, 1251
XceI	RCATGY	2 cut(s)	1561, 1883
XmaJI	CCTAGG	1 cut(s)	1340
XmiI	GTMKAC	3 cut(s)	28, 50, 2418
XmnI	GAANNNNTTC	3 cut(s)	1254, 1394, 1658
XspI	CTAG	5 cut(s)	335, 885, 1341, 2114, 2135
ZrmI	AGTACT	1 cut(s)	2001
Zsp2I	ATGCAT	2 cut(s)	1319, 1858

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.