Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0015005

Physical Location & Seq

Genomic Coordinates Forward (+)

21942630 .. 21947318

Gene Structure 4689 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g27740.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGGAGCTGCCGGAGTGCCCAGTGTGTCTGCAGAACTACGACGGCACGTCGACGATCCCGCGCGTGCTGGGATGCGGCCACTCGGCGTGCGAGGTCTGCCTTGCCAAGCTGCCCCACCGCTACCCGGAGACGATTCGCTGCCCGGCGTGTACTCAGCTCGTCAAGTACCCACCCAACGGCGCCGCCGCGCTGCCCAAGAACATCGACCTCCTCTCACTCTCTCTCTCCCTCTCTCCGCCGCAAAACCCTAACCCTAAGCCACGTCAGCAATCCGCCGATGACAAAGTGTTTAACTTCCTGCCCCGGCTTTGGTCCGACGAGTTTTACAGCACGTGGAAGGATCGGGTTCTTGGAAACGACGCCGTTTTGGTCGAAACGGAGGAAAGGGGTCGGCTTTGTGAGAGTGGTGCTGCTGTGGGGTTGGTTAAAGTCGGGTCCTTGGCGGGTTCGGGTTCGGGTTTGAGTGAGTCTGGGTTTGAGTTTAGCTACAAGGTGAGGGTATTGAAGTGTTTGAGTGGGATGAGAGAGGAGGAGAGAAGAGAATTGGGTTTGTTGATGAGAGGTGGTGTGAGGCAGTGTAGGAGGATAGGGAGGGTTTATGGGTTTTGGGGGAATGTGGAAGATGGGGTTTTGTATTTGGTGTGTGAGAGAGGGAACGGGAGAGTTGAGGAGAAGTTGAGGGGTTTGAGGAATGGGGGTGGTTTTGGGAGAGATGGGTTGGAGGGTTTTGGTGTGATTGGGATGGAGGTGTGTGAGGCTGTGATGGGGATGCATTTGGAGGGGCTTGTTGGTGGTGGTTTTGGTGCTTCATGTTTTGGTTTTGATGATTTTGGTGGTGTTTTTGTGGATTTGAGGCAGGTGGTGGTGATGGGGAGGAGGGTTTGGAGAGGTGTTGGTGGTGAAGAAATGGGAGAGGTGTTTGGGAGTCTGTTGAAGGATGGAGATTTTGTTAGCATGGAGGTGTTGTTTGAGGTGGTGCAGAGAGAGGGCGTTGCGGTGGAATGTGAGAGGTTGAAGTATCCGGTAGGGTGTGGCTCGGATGTTTGGTCATTAGGTTGTGTTTTGCTGAGTTTGCTGCTTGGGAAAGAGTTTAGTGACGAGATTGGAAAGATGGATCATATATGTGATCATTCAAGTTATGCAAGTTGGATTGAAAGAGTTGGTGATTTGGTGGACAGTAGGTTGGGTTCTGAATATGCATCACTGACGGAGACTTTATGCAAATGTTTGAATTATGATCCAGCAAGTCGTCCACGAGTGATTGACGTTATGATTTGCATCAGAGAACTGATTATTAAACCTCAATATGATATCATGGCCGGTTTGGAGAGACCAGTTAAGGAGAACAGCACAAATTATTGCTTGATTCTGGGGGAGCTCTGTAAGATACCTAAGCAAATGTCAGAAACACAGGATGACCATGAGTTGCAGGGAAAAGATGTTGGTGGAGGAGCAGACCTTGATCAGATTGATGAGGAGAGGTCTGAGAGTGGTTTTATTGATGGACTTGCAGAGGGAAAGATCAAATCTAAAGTTCTGCAGGGCCATCGTGACTCTATTACCGCCTTAGCGGTTGGAGGAGAGTTTCTATTTAGCTCCTCATTTGACAAAACCATCCATGTGTGGTCTTTGCAGGACTTCTGTCATGTACATACATTTAAAGGCCATGAGCATACCATTAAGGCTCTAATTTATGTAGATGAAGAGAAACCCTTGTGCATAAGTGGTGACAGTGGAGGCGGCATATTTGTCTGGGGCACATGTTCCCCTCTTGGGCAAGAACCATTAAAGATACTGTATGAGCAGAAAGATTGGCGCTTTAGTGGTATTCATGCCTTGGCCTTTCGAAATGGATATATCTATACTGGCAGTGGAGATAGAACAGTTAAAGCATGGTCTTTGCCGGATGGCACCATATCATGCACCATGTCTGGTCATAAATCAGTAGTTTCAACCCTTCAAGTTTGTGATAGTGTTCTTTATAGCGGCAGTTGGGATGGAACCATCCGATTATGGAGTCTCAGCGATCACAGTCCTTTGGCAGTACTAGGGGAAGACACATCTGGAACTGTGGCTTCTGTCCTATCTCTTGCTGCTGACAGACATGTGCTCATTGCAACCCATGAAAATGGATTTCTAAAGGTCTGGAGAAATGATGTGTTCATGAAATCCATTAAATTGCACAATGGTGCAGTTTTTGCTACTGGCCTGGCTGGAAAATGGCTTTTCACAGGAGGGTTGGATAAAACTGTCAATGTCCAGGAATGGTCTGGTGATGAATTTCAAACAGATTTCAGACCTATTGGATCCATCCCTTGTGATTCTGTCATTACAACTTTGTTATGCTGGCAAGGAAAGCTTTTCGTTGGATATGCTAATAGGAATATCACGGTGTTTTACTATGGTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005524 GO:0006810 GO:0006996 GO:0008104 GO:0008144 GO:0008150 GO:0008320 GO:0008565 GO:0009657 GO:0009658 GO:0009987 GO:0010109 GO:0015031 GO:0015399 GO:0015405 GO:0015440 GO:0015450 GO:0015462 GO:0015833 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019222 GO:0022804 GO:0022857 GO:0022884 GO:0030554 GO:0031323 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033220 GO:0035639 GO:0036094 GO:0042623 GO:0042626 GO:0042886 GO:0042887 GO:0043167 GO:0043168 GO:0043492 GO:0045184 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1904680

KEGG Pathways

Metabolic & Signaling

ko02024 ko03060 ko03070 map02024 map03060 map03070

Pfam Domains

Protein Families

SecA_DEAD SecA_PP_bind SecA_SW WD40 zf-RING_UBOX

Protein Analysis

804

Amino Acids

88.14

Weight (kDa)

5.4

Isoelectric Point (pI)

38.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_UBOX	PF13445	6 - 48	1.1e-06	RING-type zinc-finger
WDR55	PF24796	503 - 716	1.6e-11	WDR55
Beta-prop_SCAP	PF24017	510 - 586	2.5e-06	SCAP Beta-propeller
WD40_Gbeta	PF25391	510 - 672	1.2e-07	G protein beta WD-40 repeat protein
Beta-prop_WDR3_1st	PF25173	512 - 578	3.1e-08	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	513 - 730	1.6e-22	WDR5 beta-propeller domain
WD40_Prp19	PF24814	608 - 707	2.7e-08	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	611 - 717	1.6e-07	WDHD1 first WD40 domain
Beta-prop_TEP1_2nd	PF25047	617 - 732	1.9e-06	TEP-1 second beta-propeller
Beta-prop_THOC3	PF25174	618 - 716	3.5e-07	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	619 - 753	1.2e-13	WDR3 first beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21651
fragaria_vesca	FvH4_2g27740
prunus_persica	Prupe.1G490500_v2.0.a1 Prupe.1G490500_v2.0.a1 Prupe.1G490500_v2.0.a1
pyrus_communis	pycom15g30580
rosa_chinensis	RchiOBHm_Chr6g0296591
rosa_laevigata	RLG00000011677
rosa_multiflora	Rmu_sc0001741.1_g000020
rosa_roxburghii	Rroxscaffold_6G00390100 Rroxscaffold_7G00178750
rosa_rugosa	Rorug06G0263600
rosa_samantha	Rh6BG383500 Rh6CG388600 Rh6DG376000
rosa_wichuraiana	Rw6G032710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	847
Acc36I	ACCTGC	1 cut(s)	847
AccB1I	GGYRCC	2 cut(s)	179, 1910
AccI	GTMKAC	1 cut(s)	50
AccII	CGCG	3 cut(s)	61, 63, 188
AclWI	GGATC	6 cut(s)	49, 348, 1122, 1232, 2301, 2314
AcoI	YGGCCR	2 cut(s)	76, 1317
AcsI	RAATTY	1 cut(s)	2279
AcvI	CACGTG	1 cut(s)	333
AcyI	GRCGYC	2 cut(s)	180, 360
AfaI	GTAC	4 cut(s)	151, 167, 1650, 2046
AfiI	CCNNNNNNNGG	4 cut(s)	124, 176, 309, 1773
AflIII	ACRYGT	2 cut(s)	1760, 2104
AgsI	TTSAA	9 cut(s)	505, 934, 1015, 1134, 1154, 1231, 1953, 1961, 2285
AhdI	GACNNNNNGTC	1 cut(s)	46
AjiI	CACGTC	2 cut(s)	48, 263
AjnI	CCWGG	2 cut(s)	2208, 2259
AleI	CACNNNNGTG	1 cut(s)	2187
AluBI	AGCT	7 cut(s)	7, 109, 157, 486, 1378, 1596, 2359
AluI	AGCT	7 cut(s)	7, 109, 157, 486, 1378, 1596, 2359
Alw21I	GWGCWC	2 cut(s)	1380, 2112
Alw26I	GTCTC	4 cut(s)	122, 1205, 1324, 2024
AlwI	GGATC	6 cut(s)	49, 348, 1122, 1232, 2301, 2314
AoxI	GGCC	6 cut(s)	76, 1317, 1543, 1663, 1839, 2206
ApeKI	GCWGC	7 cut(s)	7, 109, 138, 190, 410, 1075, 2093
ApoI	RAATTY	1 cut(s)	2279
AspLEI	GCGC	4 cut(s)	63, 182, 190, 1818
AspS9I	GGNCC	3 cut(s)	312, 435, 1543
AsuC2I	CCSGG	3 cut(s)	125, 143, 304
AsuHPI	GGTGA	6 cut(s)	505, 877, 911, 1175, 1739, 2285
AsuII	TTCGAA	1 cut(s)	1846
AvaII	GGWCC	2 cut(s)	312, 435
BaeGI	GKGCMC	2 cut(s)	20, 1760
BamHI	GGATCC	1 cut(s)	2306
BanI	GGYRCC	2 cut(s)	179, 1910
BanII	GRGCYC	1 cut(s)	1380
BauI	CACGAG	1 cut(s)	1254
BbrPI	CACGTG	1 cut(s)	333
BbsI	GAAGAC	1 cut(s)	2061
Bbv12I	GWGCWC	2 cut(s)	1380, 2112
BbvI	GCAGC	6 cut(s)	96, 125, 177, 397, 1062, 2080
BceAI	ACGGC	3 cut(s)	58, 193, 347
BcgI	CGANNNNNNTGC	2 cut(s)	1529, 1563
BciT130I	CCWGG	2 cut(s)	2210, 2261
BciVI	GTATCC	1 cut(s)	1029
BclI	TGATCA	2 cut(s)	1126, 1462
BcnI	CCSGG	3 cut(s)	125, 143, 304
BcoDI	GTCTC	4 cut(s)	122, 1205, 1324, 2024
BfaI	CTAG	1 cut(s)	2048
BfmI	CTRYAG	2 cut(s)	29, 1538
BfoI	RGCGCY	2 cut(s)	183, 1819
BfuAI	ACCTGC	1 cut(s)	847
BfuI	GTATCC	1 cut(s)	1029
BmcAI	AGTACT	1 cut(s)	2046
Bme1390I	CCNGG	5 cut(s)	125, 143, 304, 2210, 2261
Bme18I	GGWCC	2 cut(s)	312, 435
BmeRI	GACNNNNNGTC	1 cut(s)	46
BmgBI	CACGTC	2 cut(s)	48, 263
BmgT120I	GGNCC	3 cut(s)	312, 435, 1543
BmiI	GGNNCC	5 cut(s)	181, 436, 1912, 2002, 2308
BmrFI	CCNGG	5 cut(s)	125, 143, 304, 2210, 2261
BmrI	ACTGGG	1 cut(s)	14
BmsI	GCATC	4 cut(s)	62, 759, 1208, 1287
BmuI	ACTGGG	1 cut(s)	14
BoxI	GACNNNNGTC	1 cut(s)	1641
BpiI	GAAGAC	1 cut(s)	2061
BpmI	CTGGAG	1 cut(s)	2167
Bpu10I	CCTNAGC	3 cut(s)	255, 1392, 1567
Bpu14I	TTCGAA	1 cut(s)	1846
BpuMI	CCSGG	3 cut(s)	125, 143, 304
BsaAI	YACGTR	1 cut(s)	333
BsaBI	GATNNNNATC	1 cut(s)	1277
BsaHI	GRCGYC	2 cut(s)	180, 360
BsaI	GGTCTC	1 cut(s)	1324
BsaJI	CCNNGG	3 cut(s)	302, 438, 1836
BsaWI	WCCGGW	1 cut(s)	1021
BsaXI	ACNNNNNCTCC	4 cut(s)	933, 950, 963, 980
Bsc4I	CCNNNNNNNGG	4 cut(s)	124, 176, 309, 1773
Bse118I	RCCGGY	1 cut(s)	1319
Bse1I	ACTGG	4 cut(s)	20, 1334, 1870, 2209
Bse3DI	GCAATG	1 cut(s)	2112
Bse8I	GATNNNNATC	1 cut(s)	1277
BseBI	CCWGG	2 cut(s)	2210, 2261
BseDI	CCNNGG	3 cut(s)	302, 438, 1836
BseJI	GATNNNNATC	1 cut(s)	1277
BseLI	CCNNNNNNNGG	4 cut(s)	124, 176, 309, 1773
BseMI	GCAATG	1 cut(s)	2112
BseMII	CTCAG	4 cut(s)	167, 1058, 1476, 2035
BseNI	ACTGG	4 cut(s)	20, 1334, 1870, 2209
BseRI	GAGGAG	9 cut(s)	200, 542, 545, 683, 889, 1464, 1490, 1588, 1593
BseSI	GKGCMC	2 cut(s)	20, 1760
BseXI	GCAGC	6 cut(s)	96, 125, 177, 397, 1062, 2080
BseYI	CCCAGC	1 cut(s)	67
BsgI	GTGCAG	2 cut(s)	998, 2211
Bsh1236I	CGCG	3 cut(s)	61, 63, 188
BshFI	GGCC	6 cut(s)	78, 1319, 1545, 1665, 1841, 2208
BshNI	GGYRCC	2 cut(s)	179, 1910
BsiHKAI	GWGCWC	2 cut(s)	1380, 2112
BsiSI	CCGG	7 cut(s)	11, 125, 143, 304, 1022, 1320, 1904
BslI	CCNNNNNNNGG	4 cut(s)	124, 176, 309, 1773
BsmAI	GTCTC	4 cut(s)	122, 1205, 1324, 2024
BsmBI	CGTCTC	1 cut(s)	122
BsnI	GGCC	6 cut(s)	78, 1319, 1545, 1665, 1841, 2208
Bso31I	GGTCTC	1 cut(s)	1324
Bsp119I	TTCGAA	1 cut(s)	1846
Bsp1286I	GDGCHC	4 cut(s)	20, 1380, 1760, 2112
Bsp1407I	TGTACA	1 cut(s)	1648
Bsp143I	GATC	9 cut(s)	54, 340, 1114, 1126, 1237, 1462, 1521, 2026, 2306
BspANI	GGCC	6 cut(s)	78, 1319, 1545, 1665, 1841, 2208
BspCNI	CTCAG	4 cut(s)	166, 1059, 1477, 2034
BspFNI	CGCG	3 cut(s)	61, 63, 188
BspHI	TCATGA	1 cut(s)	2163
BspLI	GGNNCC	5 cut(s)	181, 436, 1912, 2002, 2308
BspMAI	CTGCAG	2 cut(s)	33, 1542
BspMI	ACCTGC	1 cut(s)	847
BspPI	GGATC	6 cut(s)	49, 348, 1122, 1232, 2301, 2314
BspT104I	TTCGAA	1 cut(s)	1846
BspT107I	GGYRCC	2 cut(s)	179, 1910
BspTNI	GGTCTC	1 cut(s)	1324
BsrDI	GCAATG	1 cut(s)	2112
BsrFI	RCCGGY	1 cut(s)	1319
BsrGI	TGTACA	1 cut(s)	1648
BsrI	ACTGG	4 cut(s)	20, 1334, 1870, 2209
BssAI	RCCGGY	1 cut(s)	1319
BssECI	CCNNGG	3 cut(s)	302, 438, 1836
BssMI	GATC	9 cut(s)	54, 340, 1114, 1126, 1237, 1462, 1521, 2026, 2306
BssNI	GRCGYC	2 cut(s)	180, 360
BssSI	CACGAG	1 cut(s)	1254
BssT1I	CCWWGG	2 cut(s)	438, 1836
Bst2BI	CACGAG	1 cut(s)	1254
Bst2UI	CCWGG	2 cut(s)	2210, 2261
Bst4CI	ACNGT	8 cut(s)	1178, 1733, 1797, 1885, 2033, 2071, 2251, 2392
Bst6I	CTCTTC	2 cut(s)	532, 1698
BstACI	GRCGYC	2 cut(s)	180, 360
BstAPI	GCANNNNNTGC	1 cut(s)	2198
BstAUI	TGTACA	1 cut(s)	1648
BstBAI	YACGTR	1 cut(s)	333
BstBI	TTCGAA	1 cut(s)	1846
BstC8I	GCNNGC	3 cut(s)	65, 88, 2348
BstDEI	CTNAG	7 cut(s)	153, 255, 1067, 1392, 1485, 1567, 2021
BstFNI	CGCG	3 cut(s)	61, 63, 188
BstH2I	RGCGCY	2 cut(s)	183, 1819
BstHHI	GCGC	4 cut(s)	63, 182, 190, 1818
BstKTI	GATC	9 cut(s)	57, 343, 1117, 1129, 1240, 1465, 1524, 2029, 2309
BstMAI	GTCTC	4 cut(s)	122, 1205, 1324, 2024
BstMBI	GATC	9 cut(s)	54, 340, 1114, 1126, 1237, 1462, 1521, 2026, 2306
BstMWI	GCNNNNNNNGC	5 cut(s)	96, 265, 1072, 2198, 2356
BstNI	CCWGG	2 cut(s)	2210, 2261
BstNSI	RCATGY	2 cut(s)	1764, 2108
BstPAI	GACNNNNGTC	1 cut(s)	1641
BstSCI	CCNGG	5 cut(s)	123, 141, 302, 2208, 2259
BstSFI	CTRYAG	2 cut(s)	29, 1538
BstSLI	GKGCMC	2 cut(s)	20, 1760
BstUI	CGCG	3 cut(s)	61, 63, 188
BstV1I	GCAGC	6 cut(s)	96, 125, 177, 397, 1062, 2080
BstV2I	GAAGAC	1 cut(s)	2061
BstX2I	RGATCY	1 cut(s)	2306
BstXI	CCANNNNNNTGG	1 cut(s)	2129
BstYI	RGATCY	1 cut(s)	2306
BsuI	GTATCC	1 cut(s)	1029
BsuRI	GGCC	6 cut(s)	78, 1319, 1545, 1665, 1841, 2208
BtrI	CACGTC	2 cut(s)	48, 263
BtsI	GCAGTG	2 cut(s)	581, 1876
BtsIMutI	CAGTG	5 cut(s)	27, 581, 1202, 1738, 1876
BveI	ACCTGC	1 cut(s)	847
Cac8I	GCNNGC	3 cut(s)	65, 88, 2348
CciI	TCATGA	1 cut(s)	2163
CfoI	GCGC	4 cut(s)	63, 182, 190, 1818
Cfr10I	RCCGGY	1 cut(s)	1319
Cfr13I	GGNCC	3 cut(s)	312, 435, 1543
CseI	GACGC	1 cut(s)	368
Csp6I	GTAC	4 cut(s)	150, 166, 1649, 2045
CviQI	GTAC	4 cut(s)	150, 166, 1649, 2045
DdeI	CTNAG	7 cut(s)	153, 255, 1067, 1392, 1485, 1567, 2021
DinI	GGCGCC	1 cut(s)	181
DpnI	GATC	9 cut(s)	56, 342, 1116, 1128, 1239, 1464, 1523, 2028, 2308
DpnII	GATC	9 cut(s)	54, 340, 1114, 1126, 1237, 1462, 1521, 2026, 2306
DraI	TTTAAA	1 cut(s)	1660
DriI	GACNNNNNGTC	1 cut(s)	46
EaeI	YGGCCR	2 cut(s)	76, 1317
Eam1104I	CTCTTC	2 cut(s)	532, 1698
Eam1105I	GACNNNNNGTC	1 cut(s)	46
EarI	CTCTTC	2 cut(s)	532, 1698
EciI	GGCGGA	2 cut(s)	225, 262
Ecl136II	GAGCTC	1 cut(s)	1378
Eco130I	CCWWGG	2 cut(s)	438, 1836
Eco24I	GRGCYC	1 cut(s)	1380
Eco31I	GGTCTC	1 cut(s)	1324
Eco32I	GATATC	1 cut(s)	1312
Eco47I	GGWCC	2 cut(s)	312, 435
Eco53kI	GAGCTC	1 cut(s)	1378
Eco72I	CACGTG	1 cut(s)	333
EcoICRI	GAGCTC	1 cut(s)	1378
EcoO109I	RGGNCCY	1 cut(s)	435
EcoRII	CCWGG	2 cut(s)	2208, 2259
EcoRV	GATATC	1 cut(s)	1312
EcoT14I	CCWWGG	2 cut(s)	438, 1836
EcoT22I	ATGCAT	2 cut(s)	774, 1201
EcoT38I	GRGCYC	1 cut(s)	1380
EgeI	GGCGCC	1 cut(s)	181
EheI	GGCGCC	1 cut(s)	181
ErhI	CCWWGG	2 cut(s)	438, 1836
Esp3I	CGTCTC	1 cut(s)	122
FalI	AAGNNNNNCTT	2 cut(s)	2343, 2375
FauI	CCCGC	2 cut(s)	66, 436
FbaI	TGATCA	2 cut(s)	1126, 1462
FblI	GTMKAC	1 cut(s)	50
FriOI	GRGCYC	1 cut(s)	1380
FspBI	CTAG	1 cut(s)	2048
GlaI	GCGC	4 cut(s)	62, 181, 189, 1817
GsaI	CCCAGC	1 cut(s)	71
GsuI	CTGGAG	1 cut(s)	2167
HaeII	RGCGCY	2 cut(s)	183, 1819
HaeIII	GGCC	6 cut(s)	78, 1319, 1545, 1665, 1841, 2208
HapII	CCGG	7 cut(s)	11, 125, 143, 304, 1022, 1320, 1904
HgaI	GACGC	1 cut(s)	368
HhaI	GCGC	4 cut(s)	63, 182, 190, 1818
Hin1I	GRCGYC	2 cut(s)	180, 360
Hin6I	GCGC	4 cut(s)	61, 180, 188, 1816
HinP1I	GCGC	4 cut(s)	61, 180, 188, 1816
HincII	GTYRAC	1 cut(s)	51
HindII	GTYRAC	1 cut(s)	51
HindIII	AAGCTT	1 cut(s)	2357
HinfI	GANTC	7 cut(s)	133, 467, 925, 1366, 1553, 2017, 2321
HpaII	CCGG	7 cut(s)	11, 125, 143, 304, 1022, 1320, 1904
HphI	GGTGA	6 cut(s)	505, 877, 911, 1175, 1739, 2285
Hpy166II	GTNNAC	4 cut(s)	51, 150, 1174, 1253
Hpy188I	TCNGA	9 cut(s)	316, 1039, 1192, 1283, 1405, 1467, 1486, 2009, 2297
Hpy188III	TCNNGA	4 cut(s)	1550, 2064, 2146, 2164
Hpy8I	GTNNAC	4 cut(s)	51, 150, 1174, 1253
Hpy99I	CGWCG	5 cut(s)	44, 52, 55, 320, 362
HpyAV	CCTTC	3 cut(s)	331, 928, 1967
HpyCH4III	ACNGT	8 cut(s)	1178, 1733, 1797, 1885, 2033, 2071, 2251, 2392
HpyCH4IV	ACGT	4 cut(s)	47, 262, 332, 1266
HpyF10VI	GCNNNNNNNGC	5 cut(s)	96, 265, 1072, 2198, 2356
HpyF3I	CTNAG	7 cut(s)	153, 255, 1067, 1392, 1485, 1567, 2021
HpySE526I	ACGT	4 cut(s)	47, 262, 332, 1266
Hsp92I	GRCGYC	2 cut(s)	180, 360
HspAI	GCGC	4 cut(s)	61, 180, 188, 1816
KasI	GGCGCC	1 cut(s)	179
Ksp22I	TGATCA	2 cut(s)	1126, 1462
Kzo9I	GATC	9 cut(s)	54, 340, 1114, 1126, 1237, 1462, 1521, 2026, 2306
LmnI	GCTCC	4 cut(s)	4, 1375, 1451, 1601
Lsp1109I	GCAGC	6 cut(s)	96, 125, 177, 397, 1062, 2080
LweI	GCATC	4 cut(s)	62, 759, 1208, 1287
MaeI	CTAG	1 cut(s)	2048
MaeII	ACGT	4 cut(s)	47, 262, 332, 1266
MaeIII	GTNAC	3 cut(s)	1094, 1550, 1727
MalI	GATC	9 cut(s)	56, 342, 1116, 1128, 1239, 1464, 1523, 2028, 2308
MboI	GATC	9 cut(s)	54, 340, 1114, 1126, 1237, 1462, 1521, 2026, 2306
MboII	GAAGA	5 cut(s)	549, 632, 914, 1715, 2066
MflI	RGATCY	1 cut(s)	2306
MhlI	GDGCHC	4 cut(s)	20, 1380, 1760, 2112
MluCI	AATT	6 cut(s)	542, 1231, 1354, 1689, 2177, 2279
Mly113I	GGCGCC	1 cut(s)	180
MlyI	GAGTC	4 cut(s)	476, 934, 1547, 2026
MmeI	TCCRAC	6 cut(s)	339, 699, 1127, 1555, 2220, 2347
Mph1103I	ATGCAT	2 cut(s)	774, 1201
MseI	TTAA	9 cut(s)	291, 426, 1296, 1338, 1659, 1680, 1787, 1887, 2175
MslI	CAYNNNNRTG	5 cut(s)	959, 1122, 1619, 2127, 2187
MspI	CCGG	7 cut(s)	11, 125, 143, 304, 1022, 1320, 1904
MspR9I	CCNGG	5 cut(s)	125, 143, 304, 2210, 2261
MvaI	CCWGG	2 cut(s)	2210, 2261
MvnI	CGCG	3 cut(s)	61, 63, 188
MwoI	GCNNNNNNNGC	5 cut(s)	96, 265, 1072, 2198, 2356
NarI	GGCGCC	1 cut(s)	180
NciI	CCSGG	3 cut(s)	125, 143, 304
NdeII	GATC	9 cut(s)	54, 340, 1114, 1126, 1237, 1462, 1521, 2026, 2306
NlaIV	GGNNCC	5 cut(s)	181, 436, 1912, 2002, 2308
NmeAIII	GCCGAG	1 cut(s)	62
NmuCI	GTSAC	3 cut(s)	1094, 1550, 1727
NsiI	ATGCAT	2 cut(s)	774, 1201
NspI	RCATGY	2 cut(s)	1764, 2108
NspV	TTCGAA	1 cut(s)	1846
OliI	CACNNNNGTG	1 cut(s)	2187
PagI	TCATGA	1 cut(s)	2163
PaqCI	CACCTGC	1 cut(s)	847
PciI	ACATGT	2 cut(s)	1760, 2104
PfeI	GAWTC	3 cut(s)	133, 1366, 2321
PfoI	TCCNGGA	1 cut(s)	2259
PleI	GAGTC	4 cut(s)	475, 933, 1547, 2025
PluTI	GGCGCC	1 cut(s)	183
PmaCI	CACGTG	1 cut(s)	333
PmlI	CACGTG	1 cut(s)	333
PpsI	GAGTC	4 cut(s)	475, 933, 1547, 2025
Ppu21I	YACGTR	1 cut(s)	333
PpuMI	RGGWCCY	1 cut(s)	435
PscI	ACATGT	2 cut(s)	1760, 2104
PshAI	GACNNNNGTC	1 cut(s)	1641
Psp124BI	GAGCTC	1 cut(s)	1380
Psp5II	RGGWCCY	1 cut(s)	435
Psp6I	CCWGG	2 cut(s)	2208, 2259
PspCI	CACGTG	1 cut(s)	333
PspFI	CCCAGC	1 cut(s)	67
PspGI	CCWGG	2 cut(s)	2208, 2259
PspN4I	GGNNCC	5 cut(s)	181, 436, 1912, 2002, 2308
PspPI	GGNCC	3 cut(s)	312, 435, 1543
PspPPI	RGGWCCY	1 cut(s)	435
PsrI	GAACNNNNNNTAC	2 cut(s)	1171, 1203
PstI	CTGCAG	2 cut(s)	33, 1542
PsuI	RGATCY	1 cut(s)	2306
RsaI	GTAC	4 cut(s)	151, 167, 1650, 2046
RsaNI	GTAC	4 cut(s)	150, 166, 1649, 2045
RseI	CAYNNNNRTG	5 cut(s)	959, 1122, 1619, 2127, 2187
SacI	GAGCTC	1 cut(s)	1380
SalI	GTCGAC	1 cut(s)	49
SaqAI	TTAA	9 cut(s)	291, 426, 1296, 1338, 1659, 1680, 1787, 1887, 2175
Sau3AI	GATC	9 cut(s)	54, 340, 1114, 1126, 1237, 1462, 1521, 2026, 2306
Sau96I	GGNCC	3 cut(s)	312, 435, 1543
ScaI	AGTACT	1 cut(s)	2046
SchI	GAGTC	4 cut(s)	476, 934, 1547, 2026
ScrFI	CCNGG	5 cut(s)	125, 143, 304, 2210, 2261
SduI	GDGCHC	4 cut(s)	20, 1380, 1760, 2112
SfaNI	GCATC	4 cut(s)	62, 759, 1208, 1287
SfcI	CTRYAG	2 cut(s)	29, 1538
SfoI	GGCGCC	1 cut(s)	181
SfuI	TTCGAA	1 cut(s)	1846
SgrDI	CGTCGACG	1 cut(s)	49
SinI	GGWCC	2 cut(s)	312, 435
SmiMI	CAYNNNNRTG	5 cut(s)	959, 1122, 1619, 2127, 2187
Sse9I	AATT	6 cut(s)	542, 1231, 1354, 1689, 2177, 2279
SspDI	GGCGCC	1 cut(s)	179
SspMI	CTAG	1 cut(s)	2048
SstI	GAGCTC	1 cut(s)	1380
StyD4I	CCNGG	5 cut(s)	123, 141, 302, 2208, 2259
StyI	CCWWGG	2 cut(s)	438, 1836
TaaI	ACNGT	8 cut(s)	1178, 1733, 1797, 1885, 2033, 2071, 2251, 2392
TaiI	ACGT	4 cut(s)	50, 265, 335, 1269
TaqI	TCGA	4 cut(s)	50, 204, 372, 1846
TasI	AATT	6 cut(s)	542, 1231, 1354, 1689, 2177, 2279
TatI	WGTACW	3 cut(s)	149, 1648, 2044
TauI	GCSGC	6 cut(s)	78, 185, 188, 241, 1743, 1989
TfiI	GAWTC	3 cut(s)	133, 1366, 2321
Tru1I	TTAA	9 cut(s)	291, 426, 1296, 1338, 1659, 1680, 1787, 1887, 2175
Tru9I	TTAA	9 cut(s)	291, 426, 1296, 1338, 1659, 1680, 1787, 1887, 2175
TscAI	CASTG	5 cut(s)	27, 581, 1209, 1738, 1876
TseFI	GTSAC	3 cut(s)	1094, 1550, 1727
TseI	GCWGC	7 cut(s)	7, 109, 138, 190, 410, 1075, 2093
Tsp45I	GTSAC	3 cut(s)	1094, 1550, 1727
TspDTI	ATGAA	7 cut(s)	798, 1716, 1820, 2139, 2152, 2180, 2292
TspGWI	ACGGA	2 cut(s)	392, 1223
TspRI	CASTG	5 cut(s)	27, 581, 1209, 1738, 1876
VpaK11BI	GGWCC	2 cut(s)	312, 435
XapI	RAATTY	1 cut(s)	2279
XceI	RCATGY	2 cut(s)	1764, 2108
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2267
XmiI	GTMKAC	1 cut(s)	50
XspI	CTAG	1 cut(s)	2048
ZrmI	AGTACT	1 cut(s)	2046
Zsp2I	ATGCAT	2 cut(s)	774, 1201

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.