Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007179

Physical Location & Seq

Genomic Coordinates Forward (+)

9359325 .. 9361833

Gene Structure 2509 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G26970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGGGAAATTGCTTTGGGTTTTCCGCAAAAGTAGGTAATAGAGAAAGTCCTTATCGTGGTTCGTCAAGAATCTCTGCCAAAAGAAGTCAATCGTCTCGGCTTTCAAGCTTAACAATACAATCATCATCTTACAACGATGACACGAGTGTGGCGTCTCTTCAAACGCCTAGAAGTGAAGGAGAGCTCTTAGCATCGCCCACGCTAAAGGCATTTACGTTTAACGAGCTAAAGACAGCCACTAGGAATTTCAGACCCGATAGTGTTATCGGTGAAGGCGGTTTCGGTTATGTCTACAAAGGATGGATCGATGAACGCACTTTATCGCCTTCAAAACCAGGGTCAGGCATGGTCGTTGCTGTCAAAAAGCTTAAAGAAGAAGGGTTTCAAGGACACAGGCAGTGGTTGGCGGAGGTTGATTGTCTTGGGAGGCTTCACCATATGAATCTTGTGAAACTAATTGGATATTGCTCGAAGGGTGATCATATTCGGCTTTTGGTGTATGAGTACATGCCAAAGGGAAGCTTGGAGAATCATCTCTTTAGACGTGGGGCAGAACCGATTCCGTGGAGAACAAGGATTAAAGTGGCTATCGGTGCGGCGAGAGGGCTTGCTTTCCTTCATGAAGCTCAAGTCATATACAGAGACTTCAAGGCCTCCAATATTCTACTTGATTCGGAATTCAATGCAAAGCTTTCTGATTTTGGATTGGCGAAAGTAGGACCAACCGGAGACAGAACACACGTATCAACCCAAGTGATGGGAACTCAAGGCTATGCAGCACCTGAATACGTTGCCACTGGTCGGATAACAGCCAAAAGTGACGTCTACAGCTTCGGTGTGGTCTTGCTAGAGTTACTGTCGGGACGTCTGACCGTAGACAAAACGAAAGTAGGAGTGGAACGAAATCTGGTTGATTGGGCAATACCTTACTTAGGAGACAAAAGGAAAGTGTTTAGGATAATGGACACAAAGCTTGGGGGACAATATCCTCACAAAGGAGCTTGTTTGACTGCTAATACTGCGTTGCAATGTCTTAATCAAGAACCTAAGTTGAGGCCAAAGATGTCTGATGTGTTATCTACTCTTGAAGAGTTGGAGATGACGTTGAAGTCGGGTTCTATTTCAAACTCGGTTATGAAATTGACATCTTCTTCCTCTTCTTTCACGGCGAAACAGAGAGTAAGAACTCCGGTTGCTGATCCGGTGTTGTCTAGTAGACGATGTCGACGTGTTCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008134 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030957 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

412

Amino Acids

45.53

Weight (kDa)

9.79

Isoelectric Point (pI)

37.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	86 - 305	2.7e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	87 - 362	1e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007179)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14370 AT1G26970 AT1G26970 AT1G69790 AT1G69790 AT2G02800 AT2G02800
fragaria_vesca	FvH4_4g31680 FvH4_4g31680 FvH4_4g31680
malus_domestica	MD13G1076100.v1.1 MD16G1076300.v1.1
prunus_persica	Prupe.1G270700_v2.0.a1 Prupe.1G270700_v2.0.a1
pyrus_communis	pycom16g06630
rosa_chinensis	RchiOBHm_Chr4g0440191
rosa_laevigata	RLG00000006197
rosa_multiflora	Rmu_sc0001685.1_g000027
rosa_roxburghii	Rroxscaffold_5G00381120
rosa_rugosa	Rorug04G0325100
rosa_samantha	Rh4AG375900 Rh4BG388900 Rh4CG403400 Rh4DG382600
rosa_wichuraiana	Rw4G032170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1108
AatII	GACGTC	2 cut(s)	825, 868
AccB7I	CCANNNNNTGG	1 cut(s)	757
AccI	GTMKAC	5 cut(s)	291, 825, 876, 1216, 1225
AciI	CCGC	4 cut(s)	24, 276, 407, 596
AclWI	GGATC	2 cut(s)	311, 1193
AcsI	RAATTY	2 cut(s)	244, 677
AcyI	GRCGYC	3 cut(s)	152, 822, 865
AfaI	GTAC	1 cut(s)	506
AfiI	CCNNNNNNNGG	6 cut(s)	56, 341, 757, 801, 932, 995
AflIII	ACRYGT	2 cut(s)	739, 1228
AgsI	TTSAA	9 cut(s)	105, 161, 330, 386, 649, 682, 1088, 1108, 1125
AjiI	CACGTC	2 cut(s)	545, 1229
AjnI	CCWGG	1 cut(s)	334
AleI	CACNNNNGTG	1 cut(s)	146
Alw21I	GWGCWC	1 cut(s)	186
Alw26I	GTCTC	5 cut(s)	99, 159, 636, 723, 930
AlwI	GGATC	2 cut(s)	311, 1193
AlwNI	CAGNNNCTG	1 cut(s)	782
AoxI	GGCC	2 cut(s)	651, 1055
ApeKI	GCWGC	1 cut(s)	776
ApoI	RAATTY	2 cut(s)	244, 677
ArsI	GACNNNNNNTTYG	4 cut(s)	323, 355, 807, 839
Asp700I	GAANNNNTTC	2 cut(s)	381, 558
AspS9I	GGNCC	1 cut(s)	719
AsuHPI	GGTGA	3 cut(s)	281, 425, 488
AvaII	GGWCC	1 cut(s)	719
BaeI	ACNNNNGTAYC	2 cut(s)	726, 759
BanII	GRGCYC	1 cut(s)	186
BauI	CACGAG	1 cut(s)	142
Bbv12I	GWGCWC	1 cut(s)	186
BbvI	GCAGC	1 cut(s)	788
BccI	CCATC	2 cut(s)	294, 751
BceAI	ACGGC	1 cut(s)	1182
BciT130I	CCWGG	1 cut(s)	336
BclI	TGATCA	1 cut(s)	478
BcoDI	GTCTC	5 cut(s)	99, 159, 636, 723, 930
BfaI	CTAG	4 cut(s)	168, 240, 848, 1212
BfmI	CTRYAG	1 cut(s)	826
BisI	GCNGC	2 cut(s)	597, 777
BlsI	GCNGC	2 cut(s)	598, 778
Bme1390I	CCNGG	1 cut(s)	336
Bme18I	GGWCC	1 cut(s)	719
BmgBI	CACGTC	2 cut(s)	545, 1229
BmgT120I	GGNCC	1 cut(s)	719
BmrFI	CCNGG	1 cut(s)	336
BmsI	GCATC	1 cut(s)	200
BpuEI	CTTGAG	2 cut(s)	612, 750
Bsa29I	ATCGAT	1 cut(s)	306
BsaAI	YACGTR	1 cut(s)	742
BsaHI	GRCGYC	3 cut(s)	152, 822, 865
BsaJI	CCNNGG	2 cut(s)	335, 563
BsaWI	WCCGGW	3 cut(s)	725, 1189, 1201
BsaXI	ACNNNNNCTCC	2 cut(s)	1088, 1118
Bsc4I	CCNNNNNNNGG	6 cut(s)	56, 341, 757, 801, 932, 995
Bse1I	ACTGG	1 cut(s)	802
Bse3DI	GCAATG	1 cut(s)	1034
BseBI	CCWGG	1 cut(s)	336
BseCI	ATCGAT	1 cut(s)	306
BseDI	CCNNGG	2 cut(s)	335, 563
BseGI	GGATG	1 cut(s)	305
BseLI	CCNNNNNNNGG	6 cut(s)	56, 341, 757, 801, 932, 995
BseMI	GCAATG	1 cut(s)	1034
BseNI	ACTGG	1 cut(s)	802
BseXI	GCAGC	1 cut(s)	788
BshFI	GGCC	2 cut(s)	653, 1057
BshVI	ATCGAT	1 cut(s)	306
BsiHKAI	GWGCWC	1 cut(s)	186
BsiSI	CCGG	3 cut(s)	726, 1190, 1202
BslFI	GGGAC	2 cut(s)	876, 993
BslI	CCNNNNNNNGG	6 cut(s)	56, 341, 757, 801, 932, 995
BsmAI	GTCTC	5 cut(s)	99, 159, 636, 723, 930
BsmBI	CGTCTC	2 cut(s)	99, 159
BsmFI	GGGAC	2 cut(s)	876, 993
BsnI	GGCC	2 cut(s)	653, 1057
Bsp1286I	GDGCHC	1 cut(s)	186
Bsp143I	GATC	3 cut(s)	303, 478, 1198
BspACI	CCGC	4 cut(s)	24, 276, 407, 596
BspANI	GGCC	2 cut(s)	653, 1057
BspDI	ATCGAT	1 cut(s)	306
BspHI	TCATGA	1 cut(s)	619
BspPI	GGATC	2 cut(s)	311, 1193
BsrDI	GCAATG	1 cut(s)	1034
BsrI	ACTGG	1 cut(s)	802
BssECI	CCNNGG	2 cut(s)	335, 563
BssMI	GATC	3 cut(s)	303, 478, 1198
BssNI	GRCGYC	3 cut(s)	152, 822, 865
BssSI	CACGAG	1 cut(s)	142
Bst2BI	CACGAG	1 cut(s)	142
Bst2UI	CCWGG	1 cut(s)	336
Bst4CI	ACNGT	2 cut(s)	858, 874
Bst6I	CTCTTC	3 cut(s)	162, 1083, 1162
BstACI	GRCGYC	3 cut(s)	152, 822, 865
BstBAI	YACGTR	1 cut(s)	742
BstC8I	GCNNGC	1 cut(s)	609
BstDEI	CTNAG	3 cut(s)	187, 931, 1047
BstDSI	CCRYGG	1 cut(s)	563
BstENI	CCTNNNNNAGG	2 cut(s)	930, 993
BstF5I	GGATG	1 cut(s)	305
BstKTI	GATC	3 cut(s)	306, 481, 1201
BstMAI	GTCTC	5 cut(s)	99, 159, 636, 723, 930
BstMBI	GATC	3 cut(s)	303, 478, 1198
BstMWI	GCNNNNNNNGC	2 cut(s)	593, 1019
BstNI	CCWGG	1 cut(s)	336
BstNSI	RCATGY	1 cut(s)	511
BstSCI	CCNGG	1 cut(s)	334
BstSFI	CTRYAG	1 cut(s)	826
BstV1I	GCAGC	1 cut(s)	788
Bsu15I	ATCGAT	1 cut(s)	306
BsuRI	GGCC	2 cut(s)	653, 1057
BsuTUI	ATCGAT	1 cut(s)	306
BtgI	CCRYGG	1 cut(s)	563
BtgZI	GCGATG	1 cut(s)	177
BtrI	CACGTC	2 cut(s)	545, 1229
BtsCI	GGATG	1 cut(s)	305
BtsI	GCAGTG	1 cut(s)	404
BtsIMutI	CAGTG	2 cut(s)	404, 795
Cac8I	GCNNGC	1 cut(s)	609
CaiI	CAGNNNCTG	1 cut(s)	782
CciI	TCATGA	1 cut(s)	619
Cfr13I	GGNCC	1 cut(s)	719
ClaI	ATCGAT	1 cut(s)	306
CseI	GACGC	1 cut(s)	141
Csp6I	GTAC	1 cut(s)	505
CviAII	CATG	3 cut(s)	346, 508, 620
CviQI	GTAC	1 cut(s)	505
DdeI	CTNAG	3 cut(s)	187, 931, 1047
DpnI	GATC	3 cut(s)	305, 480, 1200
DpnII	GATC	3 cut(s)	303, 478, 1198
DrdI	GACNNNNNNGTC	1 cut(s)	1108
DseDI	GACNNNNNNGTC	1 cut(s)	1108
Eam1104I	CTCTTC	3 cut(s)	162, 1083, 1162
EarI	CTCTTC	3 cut(s)	162, 1083, 1162
EciI	GGCGGA	1 cut(s)	422
Ecl136II	GAGCTC	1 cut(s)	184
Eco147I	AGGCCT	1 cut(s)	653
Eco24I	GRGCYC	1 cut(s)	186
Eco47I	GGWCC	1 cut(s)	719
Eco53kI	GAGCTC	1 cut(s)	184
EcoICRI	GAGCTC	1 cut(s)	184
EcoNI	CCTNNNNNAGG	2 cut(s)	930, 993
EcoRI	GAATTC	1 cut(s)	677
EcoRII	CCWGG	1 cut(s)	334
EcoT38I	GRGCYC	1 cut(s)	186
Esp3I	CGTCTC	2 cut(s)	99, 159
FaeI	CATG	3 cut(s)	349, 511, 623
FalI	AAGNNNNNCTT	2 cut(s)	506, 538
FaqI	GGGAC	2 cut(s)	876, 993
FatI	CATG	3 cut(s)	345, 507, 619
FauNDI	CATATG	1 cut(s)	438
FbaI	TGATCA	1 cut(s)	478
FblI	GTMKAC	5 cut(s)	291, 825, 876, 1216, 1225
Fnu4HI	GCNGC	2 cut(s)	597, 777
FokI	GGATG	1 cut(s)	312
FriOI	GRGCYC	1 cut(s)	186
Fsp4HI	GCNGC	2 cut(s)	597, 777
FspBI	CTAG	4 cut(s)	168, 240, 848, 1212
GluI	GCNGC	2 cut(s)	597, 777
HaeIII	GGCC	2 cut(s)	653, 1057
HapII	CCGG	3 cut(s)	726, 1190, 1202
HgaI	GACGC	1 cut(s)	141
Hin1I	GRCGYC	3 cut(s)	152, 822, 865
Hin1II	CATG	3 cut(s)	349, 511, 623
HincII	GTYRAC	1 cut(s)	1226
HindII	GTYRAC	1 cut(s)	1226
HindIII	AAGCTT	5 cut(s)	106, 365, 520, 689, 971
HinfI	GANTC	5 cut(s)	69, 442, 529, 559, 671
HpaII	CCGG	3 cut(s)	726, 1190, 1202
HphI	GGTGA	3 cut(s)	281, 425, 488
Hpy166II	GTNNAC	5 cut(s)	292, 826, 877, 1217, 1226
Hpy188I	TCNGA	6 cut(s)	251, 676, 697, 804, 870, 1069
Hpy188III	TCNNGA	5 cut(s)	66, 620, 861, 1040, 1085
Hpy8I	GTNNAC	5 cut(s)	292, 826, 877, 1217, 1226
Hpy99I	CGWCG	1 cut(s)	1230
HpyAV	CCTTC	6 cut(s)	170, 266, 336, 371, 466, 626
HpyCH4III	ACNGT	2 cut(s)	858, 874
HpyCH4IV	ACGT	8 cut(s)	215, 544, 741, 789, 822, 865, 1103, 1228
HpyCH4V	TGCA	3 cut(s)	686, 776, 1027
HpyF10VI	GCNNNNNNNGC	2 cut(s)	593, 1019
HpyF3I	CTNAG	3 cut(s)	187, 931, 1047
HpySE526I	ACGT	8 cut(s)	215, 544, 741, 789, 822, 865, 1103, 1228
Hsp92I	GRCGYC	3 cut(s)	152, 822, 865
Hsp92II	CATG	3 cut(s)	349, 511, 623
Ksp22I	TGATCA	1 cut(s)	478
Kzo9I	GATC	3 cut(s)	303, 478, 1198
LmnI	GCTCC	1 cut(s)	998
Lsp1109I	GCAGC	1 cut(s)	788
LweI	GCATC	1 cut(s)	200
MaeI	CTAG	4 cut(s)	168, 240, 848, 1212
MaeII	ACGT	8 cut(s)	215, 544, 741, 789, 822, 865, 1103, 1228
MaeIII	GTNAC	2 cut(s)	818, 852
MalI	GATC	3 cut(s)	305, 480, 1200
MboI	GATC	3 cut(s)	303, 478, 1198
MboII	GAAGA	6 cut(s)	149, 386, 1100, 1140, 1143, 1149
MhlI	GDGCHC	1 cut(s)	186
MluCI	AATT	5 cut(s)	7, 244, 456, 677, 1139
MmeI	TCCRAC	2 cut(s)	782, 1074
MnlI	CCTC	7 cut(s)	403, 420, 596, 664, 999, 1047, 1165
MroXI	GAANNNNTTC	2 cut(s)	381, 558
MseI	TTAA	5 cut(s)	110, 219, 369, 579, 1035
MslI	CAYNNNNRTG	1 cut(s)	146
MspI	CCGG	3 cut(s)	726, 1190, 1202
MspR9I	CCNGG	1 cut(s)	336
MvaI	CCWGG	1 cut(s)	336
MwoI	GCNNNNNNNGC	2 cut(s)	593, 1019
NdeI	CATATG	1 cut(s)	438
NdeII	GATC	3 cut(s)	303, 478, 1198
NlaIII	CATG	3 cut(s)	349, 511, 623
NmeAIII	GCCGAG	1 cut(s)	76
NmuCI	GTSAC	1 cut(s)	818
NspI	RCATGY	1 cut(s)	511
OliI	CACNNNNGTG	1 cut(s)	146
PagI	TCATGA	1 cut(s)	619
PceI	AGGCCT	1 cut(s)	653
PcsI	WCGNNNNNNNCGW	2 cut(s)	149, 1225
PdmI	GAANNNNTTC	2 cut(s)	381, 558
PfeI	GAWTC	5 cut(s)	69, 442, 529, 559, 671
PflFI	GACNNNGTC	1 cut(s)	1221
PflMI	CCANNNNNTGG	1 cut(s)	757
PkrI	GCNGC	2 cut(s)	598, 778
Ppu21I	YACGTR	1 cut(s)	742
Psp124BI	GAGCTC	1 cut(s)	186
Psp6I	CCWGG	1 cut(s)	334
PspGI	CCWGG	1 cut(s)	334
PspPI	GGNCC	1 cut(s)	719
PstNI	CAGNNNCTG	1 cut(s)	782
PsyI	GACNNNGTC	1 cut(s)	1221
RsaI	GTAC	1 cut(s)	506
RsaNI	GTAC	1 cut(s)	505
RseI	CAYNNNNRTG	1 cut(s)	146
SacI	GAGCTC	1 cut(s)	186
SalI	GTCGAC	1 cut(s)	1224
SaqAI	TTAA	5 cut(s)	110, 219, 369, 579, 1035
SatI	GCNGC	2 cut(s)	597, 777
Sau3AI	GATC	3 cut(s)	303, 478, 1198
Sau96I	GGNCC	1 cut(s)	719
ScrFI	CCNGG	1 cut(s)	336
SduI	GDGCHC	1 cut(s)	186
SfaNI	GCATC	1 cut(s)	200
SfcI	CTRYAG	1 cut(s)	826
SinI	GGWCC	1 cut(s)	719
SmiMI	CAYNNNNRTG	1 cut(s)	146
SmlI	CTYRAG	2 cut(s)	627, 765
SmoI	CTYRAG	2 cut(s)	627, 765
Sse9I	AATT	5 cut(s)	7, 244, 456, 677, 1139
SseBI	AGGCCT	1 cut(s)	653
SsiI	CCGC	4 cut(s)	24, 276, 407, 596
SspI	AATATT	1 cut(s)	661
SspMI	CTAG	4 cut(s)	168, 240, 848, 1212
SstI	GAGCTC	1 cut(s)	186
StuI	AGGCCT	1 cut(s)	653
StyD4I	CCNGG	1 cut(s)	334
TaaI	ACNGT	2 cut(s)	858, 874
TaiI	ACGT	8 cut(s)	218, 547, 744, 792, 825, 868, 1106, 1231
TaqI	TCGA	3 cut(s)	306, 470, 1225
TasI	AATT	5 cut(s)	7, 244, 456, 677, 1139
TatI	WGTACW	1 cut(s)	504
TauI	GCSGC	1 cut(s)	599
TfiI	GAWTC	5 cut(s)	69, 442, 529, 559, 671
Tru1I	TTAA	5 cut(s)	110, 219, 369, 579, 1035
Tru9I	TTAA	5 cut(s)	110, 219, 369, 579, 1035
TscAI	CASTG	2 cut(s)	404, 802
TseFI	GTSAC	1 cut(s)	818
TseI	GCWGC	1 cut(s)	776
Tsp45I	GTSAC	1 cut(s)	818
TspDTI	ATGAA	5 cut(s)	324, 455, 608, 636, 1151
TspGWI	ACGGA	1 cut(s)	552
TspRI	CASTG	2 cut(s)	404, 802
Tth111I	GACNNNGTC	1 cut(s)	1221
Van91I	CCANNNNNTGG	1 cut(s)	757
VpaK11BI	GGWCC	1 cut(s)	719
XagI	CCTNNNNNAGG	2 cut(s)	930, 993
XapI	RAATTY	2 cut(s)	244, 677
XceI	RCATGY	1 cut(s)	511
XmiI	GTMKAC	5 cut(s)	291, 825, 876, 1216, 1225
XmnI	GAANNNNTTC	2 cut(s)	381, 558
XspI	CTAG	4 cut(s)	168, 240, 848, 1212
ZraI	GACGTC	2 cut(s)	823, 866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.