FvH4_4g31680
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
30729797 .. 30733336
3540 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g31680.t1

Sequence Viewer

Length: 1266 bp
ATGGGCAACTGTCTGGGTTCTTCTGCTAGGGTTGATACAGCTCAGAGCACCCTTGGTACTTCAGCGTCGGGGACTTCCAAATCTTCCAGCAAAACCAGCCCTTCATCAGCTGCTCCCCCCAGCTTGACCATTTCATCATATAGTGAAAAGAGCAATAGTTCAAGTCTTCCTACACCAAGGACGGAAGGTGAAATATTGTCATCTCCAAATCTAAACCCGTTCTCATTCAATGAGCTAAGGAATGCCACCAGGAACTTTCGCCCTGACAGTCTTCTCGGCGAGGGAGGATTCGGTTATGTTTTCAAAGGATGGATTAATGAAACCACGTTTACAGCAGCAAAGCCAGGGTCAGGAATGGTTGTAGCCGTCAAGAAGCTCAAACCTGAAGGTTTCCAAGGTCACAAGGAGTGGTTGACAGAAGTTAATTATCTTGGCCAGCTCTATCATCCAAATCTAGTTAAGCTTATTGGGTACTGCTTGGAAGGTGAAAACCGTCTATTGGTGTATGAGTTCATGCCAAAAGGAAGCTTAGAGAATCATCTTTTCAGAAGAGGGCCGCAACCACTTTCATGGGCAACAAGAATGAAAGTAGCCATAGGTGCTGCCAGGGGGCTAAGTTTTCTTCATGAAGCCGAATCACAAGTTATTTATCGTGATTTCAAGGCTTCCAATATTTTACTTGATGCGGAATTCAATGCAAAACTTTCTGATTTTGGCCTGGCCAAGGCGGGTCCCACTGGTGACCGGACCCATGTTTCTACTCAAGTCATGGGCACTCAGGGCTATGCAGCACCTGAATATGTTGCTACAGGTCGATTAACTGCTAAAAGTGACGTTTATAGTTTTGGGGTTGTATTGTTGGAACTTTTGTCTGGACGGCGAGCTGTCGATAAAACAAAGGTTGGCGTCGAGCAGAATCTTGTAGACTGGACAAAACCATATTTAGGTGACAAAAGAAAACTATTTCGAATTATGGACACCAAGTTGGAGGGTCAATATCCTCAGAAATCAGCCTATACAGCTGCTACTCTGGCTTTACAGTGCCTAAGCCCAGAATCTAAACAAAGGCCTACAATGTCAACAGTTGTAGCAACACTGGAACAACTTGATGCCCCCAAAACACCTGCCAGAATCTCTCAATCAGAGCAGCAGGGAGTTCCTCTTCATCACCGTAGGTCCCCCATGCAACATCACCGTTCTCCTTTAAATTTAACGCCCAGTGCATCTCCATTGCCATCCTACCGGCCATCTGCTTTTGTTCATTGA

Protein Analysis

422

Amino Acids

45.94

Weight (kDa)

9.52

Isoelectric Point (pI)

42.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 89 - 364 4.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 90 - 366 1.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1132
Acc36I ACCTGC 1 cut(s) 1132
AccI GTMKAC 1 cut(s) 924
AciI CCGC 3 cut(s) 557, 686, 728
AcoI YGGCCR 3 cut(s) 433, 720, 1244
AcsI RAATTY 2 cut(s) 689, 1207
AcuI CTGAAG 2 cut(s) 45, 405
AcyI GRCGYC 1 cut(s) 906
AfaI GTAC 2 cut(s) 58, 473
AfiI CCNNNNNNNGG 4 cut(s) 350, 499, 724, 944
AgsI TTSAA 5 cut(s) 162, 229, 304, 661, 694
AjnI CCWGG 4 cut(s) 248, 343, 605, 717
Alw21I GWGCWC 1 cut(s) 50
AlwNI CAGNNNCTG 1 cut(s) 794
AoxI GGCC 6 cut(s) 433, 554, 715, 720, 1067, 1244
ApeKI GCWGC 6 cut(s) 110, 335, 602, 788, 1022, 1147
ApoI RAATTY 2 cut(s) 689, 1207
ArsI GACNNNNNNTTYG 2 cut(s) 332, 364
AseI ATTAAT 1 cut(s) 315
AspS9I GGNCC 4 cut(s) 554, 731, 747, 1176
AsuHPI GGTGA 6 cut(s) 200, 497, 752, 959, 1160, 1184
AsuII TTCGAA 1 cut(s) 967
AvaII GGWCC 3 cut(s) 731, 747, 1176
BaeGI GKGCMC 1 cut(s) 776
BalI TGGCCA 2 cut(s) 435, 722
BbsI GAAGAC 2 cut(s) 158, 263
Bbv12I GWGCWC 1 cut(s) 50
BbvI GCAGC 6 cut(s) 97, 347, 589, 800, 1009, 1159
BccI CCATC 3 cut(s) 303, 1243, 1255
BceAI ACGGC 2 cut(s) 350, 893
BciT130I CCWGG 4 cut(s) 250, 345, 607, 719
BfaI CTAG 2 cut(s) 27, 455
BfmI CTRYAG 1 cut(s) 807
BfuAI ACCTGC 1 cut(s) 1132
BisI GCNGC 7 cut(s) 111, 336, 557, 603, 789, 1023, 1148
BlsI GCNGC 7 cut(s) 112, 337, 558, 604, 790, 1024, 1149
Bme1390I CCNGG 4 cut(s) 250, 345, 607, 719
Bme18I GGWCC 3 cut(s) 731, 747, 1176
BmgT120I GGNCC 4 cut(s) 554, 731, 747, 1176
BmiI GGNNCC 4 cut(s) 732, 733, 749, 1178
BmrFI CCNGG 4 cut(s) 250, 345, 607, 719
BmrI ACTGGG 1 cut(s) 1212
BmsI GCATC 3 cut(s) 673, 1099, 1232
BmuI ACTGGG 1 cut(s) 1212
BpiI GAAGAC 2 cut(s) 158, 263
Bpu10I CCTNAGC 2 cut(s) 236, 1046
Bpu14I TTCGAA 1 cut(s) 967
BpuEI CTTGAG 1 cut(s) 747
BsaHI GRCGYC 1 cut(s) 906
BsaJI CCNNGG 6 cut(s) 52, 176, 344, 394, 606, 723
BsaWI WCCGGW 1 cut(s) 744
Bsc4I CCNNNNNNNGG 4 cut(s) 350, 499, 724, 944
Bse118I RCCGGY 1 cut(s) 1242
Bse1I ACTGG 4 cut(s) 742, 932, 1101, 1218
Bse3DI GCAATG 1 cut(s) 1229
BseBI CCWGG 4 cut(s) 250, 345, 607, 719
BseDI CCNNGG 6 cut(s) 52, 176, 344, 394, 606, 723
BseGI GGATG 3 cut(s) 314, 445, 1235
BseLI CCNNNNNNNGG 4 cut(s) 350, 499, 724, 944
BseMI GCAATG 1 cut(s) 1229
BseMII CTCAG 3 cut(s) 56, 791, 1016
BseNI ACTGG 4 cut(s) 742, 932, 1101, 1218
BseSI GKGCMC 1 cut(s) 776
BseXI GCAGC 6 cut(s) 97, 347, 589, 800, 1009, 1159
BseYI CCCAGC 1 cut(s) 119
BshFI GGCC 6 cut(s) 435, 556, 717, 722, 1069, 1246
BsiHKAI GWGCWC 1 cut(s) 50
BsiSI CCGG 2 cut(s) 745, 1243
BslFI GGGAC 3 cut(s) 85, 717, 1162
BslI CCNNNNNNNGG 4 cut(s) 350, 499, 724, 944
BsmFI GGGAC 3 cut(s) 85, 717, 1162
BsmI GAATGC 1 cut(s) 247
BsnI GGCC 6 cut(s) 435, 556, 717, 722, 1069, 1246
Bsp119I TTCGAA 1 cut(s) 967
Bsp1286I GDGCHC 2 cut(s) 50, 776
BspACI CCGC 3 cut(s) 557, 686, 728
BspANI GGCC 6 cut(s) 435, 556, 717, 722, 1069, 1246
BspCNI CTCAG 3 cut(s) 55, 790, 1015
BspHI TCATGA 1 cut(s) 625
BspLI GGNNCC 4 cut(s) 732, 733, 749, 1178
BspMI ACCTGC 1 cut(s) 1132
BspT104I TTCGAA 1 cut(s) 967
BsrDI GCAATG 1 cut(s) 1229
BsrFI RCCGGY 1 cut(s) 1242
BsrI ACTGG 4 cut(s) 742, 932, 1101, 1218
BssAI RCCGGY 1 cut(s) 1242
BssECI CCNNGG 6 cut(s) 52, 176, 344, 394, 606, 723
BssNI GRCGYC 1 cut(s) 906
BssT1I CCWWGG 4 cut(s) 52, 176, 394, 723
Bst2UI CCWGG 4 cut(s) 250, 345, 607, 719
Bst4CI ACNGT 7 cut(s) 11, 269, 494, 1041, 1084, 1172, 1196
Bst6I CTCTTC 2 cut(s) 544, 1167
BstACI GRCGYC 1 cut(s) 906
BstBI TTCGAA 1 cut(s) 967
BstC8I GCNNGC 2 cut(s) 437, 882
BstDEI CTNAG 7 cut(s) 42, 236, 529, 614, 777, 1002, 1046
BstEII GGTNACC 1 cut(s) 740
BstENI CCTNNNNNAGG 1 cut(s) 722
BstF5I GGATG 3 cut(s) 314, 445, 1235
BstMWI GCNNNNNNNGC 5 cut(s) 96, 599, 780, 1019, 1031
BstNI CCWGG 4 cut(s) 250, 345, 607, 719
BstPI GGTNACC 1 cut(s) 740
BstSCI CCNGG 4 cut(s) 248, 343, 605, 717
BstSFI CTRYAG 1 cut(s) 807
BstSLI GKGCMC 1 cut(s) 776
BstV1I GCAGC 6 cut(s) 97, 347, 589, 800, 1009, 1159
BstV2I GAAGAC 2 cut(s) 158, 263
BstXI CCANNNNNNTGG 1 cut(s) 570
BsuRI GGCC 6 cut(s) 435, 556, 717, 722, 1069, 1246
BtsCI GGATG 3 cut(s) 314, 445, 1235
BtsIMutI CAGTG 4 cut(s) 735, 1046, 1094, 1225
BveI ACCTGC 1 cut(s) 1132
Cac8I GCNNGC 2 cut(s) 437, 882
CaiI CAGNNNCTG 1 cut(s) 794
CciI TCATGA 1 cut(s) 625
Cfr10I RCCGGY 1 cut(s) 1242
Cfr13I GGNCC 4 cut(s) 554, 731, 747, 1176
CseI GACGC 2 cut(s) 54, 895
Csp6I GTAC 2 cut(s) 57, 472
CviAII CATG 6 cut(s) 514, 570, 626, 752, 769, 1183
CviQI GTAC 2 cut(s) 57, 472
DdeI CTNAG 7 cut(s) 42, 236, 529, 614, 777, 1002, 1046
DraI TTTAAA 1 cut(s) 1206
EaeI YGGCCR 3 cut(s) 433, 720, 1244
Eam1104I CTCTTC 2 cut(s) 544, 1167
EarI CTCTTC 2 cut(s) 544, 1167
Eco130I CCWWGG 4 cut(s) 52, 176, 394, 723
Eco147I AGGCCT 1 cut(s) 1069
Eco47I GGWCC 3 cut(s) 731, 747, 1176
Eco57I CTGAAG 2 cut(s) 45, 405
Eco91I GGTNACC 1 cut(s) 740
EcoNI CCTNNNNNAGG 1 cut(s) 722
EcoO109I RGGNCCY 2 cut(s) 731, 1176
EcoO65I GGTNACC 1 cut(s) 740
EcoRI GAATTC 1 cut(s) 689
EcoRII CCWGG 4 cut(s) 248, 343, 605, 717
EcoT14I CCWWGG 4 cut(s) 52, 176, 394, 723
ErhI CCWWGG 4 cut(s) 52, 176, 394, 723
FaeI CATG 6 cut(s) 517, 573, 629, 755, 772, 1186
FaqI GGGAC 3 cut(s) 85, 717, 1162
FatI CATG 6 cut(s) 513, 569, 625, 751, 768, 1182
FauI CCCGC 1 cut(s) 721
FblI GTMKAC 1 cut(s) 924
Fnu4HI GCNGC 7 cut(s) 111, 336, 557, 603, 789, 1023, 1148
FokI GGATG 3 cut(s) 321, 432, 1222
Fsp4HI GCNGC 7 cut(s) 111, 336, 557, 603, 789, 1023, 1148
FspBI CTAG 2 cut(s) 27, 455
GluI GCNGC 7 cut(s) 111, 336, 557, 603, 789, 1023, 1148
GsaI CCCAGC 1 cut(s) 123
HaeIII GGCC 6 cut(s) 435, 556, 717, 722, 1069, 1246
HapII CCGG 2 cut(s) 745, 1243
HgaI GACGC 2 cut(s) 54, 895
Hin1I GRCGYC 1 cut(s) 906
Hin1II CATG 6 cut(s) 517, 573, 629, 755, 772, 1186
HincII GTYRAC 2 cut(s) 414, 1080
HindII GTYRAC 2 cut(s) 414, 1080
HindIII AAGCTT 2 cut(s) 461, 526
HinfI GANTC 6 cut(s) 288, 535, 635, 916, 1055, 1131
HpaII CCGG 2 cut(s) 745, 1243
HphI GGTGA 6 cut(s) 200, 497, 752, 959, 1160, 1184
Hpy166II GTNNAC 4 cut(s) 330, 414, 925, 1080
Hpy188I TCNGA 5 cut(s) 45, 548, 709, 1005, 1144
Hpy188III TCNNGA 5 cut(s) 351, 370, 626, 653, 873
Hpy8I GTNNAC 4 cut(s) 330, 414, 925, 1080
Hpy99I CGWCG 2 cut(s) 70, 911
HpyAV CCTTC 4 cut(s) 111, 179, 380, 476
HpyCH4III ACNGT 7 cut(s) 11, 269, 494, 1041, 1084, 1172, 1196
HpyCH4IV ACGT 2 cut(s) 326, 834
HpyCH4V TGCA 4 cut(s) 698, 788, 1186, 1223
HpyF10VI GCNNNNNNNGC 5 cut(s) 96, 599, 780, 1019, 1031
HpyF3I CTNAG 7 cut(s) 42, 236, 529, 614, 777, 1002, 1046
HpySE526I ACGT 2 cut(s) 326, 834
Hsp92I GRCGYC 1 cut(s) 906
Hsp92II CATG 6 cut(s) 517, 573, 629, 755, 772, 1186
KflI GGGWCCC 1 cut(s) 731
LmnI GCTCC 1 cut(s) 118
Lsp1109I GCAGC 6 cut(s) 97, 347, 589, 800, 1009, 1159
LweI GCATC 3 cut(s) 673, 1099, 1232
MaeI CTAG 2 cut(s) 27, 455
MaeII ACGT 2 cut(s) 326, 834
MaeIII GTNAC 4 cut(s) 398, 740, 830, 947
MboII GAAGA 7 cut(s) 12, 75, 158, 263, 561, 614, 1154
MhlI GDGCHC 2 cut(s) 50, 776
MlsI TGGCCA 2 cut(s) 435, 722
MluCI AATT 4 cut(s) 424, 689, 969, 1207
MluNI TGGCCA 2 cut(s) 435, 722
MmeI TCCRAC 2 cut(s) 840, 966
MnlI CCTC 6 cut(s) 274, 278, 545, 982, 1011, 1170
Mox20I TGGCCA 2 cut(s) 435, 722
MscI TGGCCA 2 cut(s) 435, 722
MseI TTAA 6 cut(s) 315, 423, 459, 818, 1205, 1211
MslI CAYNNNNRTG 1 cut(s) 568
Msp20I TGGCCA 2 cut(s) 435, 722
MspA1I CMGCKG 2 cut(s) 110, 1022
MspI CCGG 2 cut(s) 745, 1243
MspR9I CCNGG 4 cut(s) 250, 345, 607, 719
Mva1269I GAATGC 1 cut(s) 247
MvaI CCWGG 4 cut(s) 250, 345, 607, 719
MwoI GCNNNNNNNGC 5 cut(s) 96, 599, 780, 1019, 1031
NlaIII CATG 6 cut(s) 517, 573, 629, 755, 772, 1186
NlaIV GGNNCC 4 cut(s) 732, 733, 749, 1178
NmeAIII GCCGAG 1 cut(s) 255
NmuCI GTSAC 4 cut(s) 398, 740, 830, 947
NspV TTCGAA 1 cut(s) 967
PagI TCATGA 1 cut(s) 625
PaqCI CACCTGC 1 cut(s) 1132
PceI AGGCCT 1 cut(s) 1069
PctI GAATGC 1 cut(s) 247
PfeI GAWTC 6 cut(s) 288, 535, 635, 916, 1055, 1131
PkrI GCNGC 7 cut(s) 112, 337, 558, 604, 790, 1024, 1149
PpuMI RGGWCCY 2 cut(s) 731, 1176
PshBI ATTAAT 1 cut(s) 315
Psp5II RGGWCCY 2 cut(s) 731, 1176
Psp6I CCWGG 4 cut(s) 248, 343, 605, 717
PspEI GGTNACC 1 cut(s) 740
PspFI CCCAGC 1 cut(s) 119
PspGI CCWGG 4 cut(s) 248, 343, 605, 717
PspN4I GGNNCC 4 cut(s) 732, 733, 749, 1178
PspPI GGNCC 4 cut(s) 554, 731, 747, 1176
PspPPI RGGWCCY 2 cut(s) 731, 1176
PstNI CAGNNNCTG 1 cut(s) 794
PvuII CAGCTG 2 cut(s) 110, 1022
RsaI GTAC 2 cut(s) 58, 473
RsaNI GTAC 2 cut(s) 57, 472
RseI CAYNNNNRTG 1 cut(s) 568
SaqAI TTAA 6 cut(s) 315, 423, 459, 818, 1205, 1211
SatI GCNGC 7 cut(s) 111, 336, 557, 603, 789, 1023, 1148
Sau96I GGNCC 4 cut(s) 554, 731, 747, 1176
ScrFI CCNGG 4 cut(s) 250, 345, 607, 719
SduI GDGCHC 2 cut(s) 50, 776
SfaNI GCATC 3 cut(s) 673, 1099, 1232
SfcI CTRYAG 1 cut(s) 807
SfuI TTCGAA 1 cut(s) 967
SinI GGWCC 3 cut(s) 731, 747, 1176
SmiMI CAYNNNNRTG 1 cut(s) 568
SmlI CTYRAG 1 cut(s) 762
SmoI CTYRAG 1 cut(s) 762
Sse9I AATT 4 cut(s) 424, 689, 969, 1207
SseBI AGGCCT 1 cut(s) 1069
SsiI CCGC 3 cut(s) 557, 686, 728
SspI AATATT 2 cut(s) 195, 673
SspMI CTAG 2 cut(s) 27, 455
StuI AGGCCT 1 cut(s) 1069
StyD4I CCNGG 4 cut(s) 248, 343, 605, 717
StyI CCWWGG 4 cut(s) 52, 176, 394, 723
TaaI ACNGT 7 cut(s) 11, 269, 494, 1041, 1084, 1172, 1196
TaiI ACGT 2 cut(s) 329, 837
TaqI TCGA 4 cut(s) 814, 888, 909, 967
TasI AATT 4 cut(s) 424, 689, 969, 1207
TauI GCSGC 1 cut(s) 559
TfiI GAWTC 6 cut(s) 288, 535, 635, 916, 1055, 1131
Tru1I TTAA 6 cut(s) 315, 423, 459, 818, 1205, 1211
Tru9I TTAA 6 cut(s) 315, 423, 459, 818, 1205, 1211
TscAI CASTG 4 cut(s) 742, 1046, 1101, 1225
TseFI GTSAC 4 cut(s) 398, 740, 830, 947
TseI GCWGC 6 cut(s) 110, 335, 602, 788, 1022, 1147
Tsp45I GTSAC 4 cut(s) 398, 740, 830, 947
TspGWI ACGGA 1 cut(s) 197
TspRI CASTG 4 cut(s) 742, 1046, 1101, 1225
VpaK11BI GGWCC 3 cut(s) 731, 747, 1176
VspI ATTAAT 1 cut(s) 315
XagI CCTNNNNNAGG 1 cut(s) 722
XapI RAATTY 2 cut(s) 689, 1207
XmiI GTMKAC 1 cut(s) 924
XspI CTAG 2 cut(s) 27, 455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.