Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014923

Physical Location & Seq

Genomic Coordinates Reverse (-)

10796124 .. 10801093

Gene Structure 4970 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G30490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2526 bp

ATGATGGCTCATCACTCCATGGACGATAGAGACTCTCCTGATAAAGGATTTGATTCCGGCAAGTACGTTAGATACACGCCGGAACAAGTTGAAGCTCTTGAGAGAGTTTATGCTGAGTGTCCTAAACCTAGCTCTCTGAGAAGACAACAGCTTATTCGTGAATGTCCCATTCTCTGTAACATCGAGCCTCGACAGATCAAAGTTTGGTTCCAGAATCGCAGATGTCGAGAGAAGCAGAGGAAAGAGTCAGCTCGTCTTCAGACAGTGAACAGGAAGCTGAGTGCTATGAACAAGCTTTTGATGGAAGAGAATGATCGTTTGCAGAAGCAAGTCTCCAACTTGGTTTATGAGAATGGATTCATGAAACATCGAATCCACACTGCTTCTGGGACGACCACAGACAACAGCTGTGAGTCTGTGGTCGTGAGTGGTCAGCAACGTCAGCAGCAAAACCCAACACATCAGCATCCTCAGCGTGATGTTAACAACCCAGCTAATCTTCTCTCGATTGCGGAGGAGACCTTGGCGGAGTTCCTTTGCAAGGCTACAGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGTATCGTAGCTGTTTCACGCAACTGCAGTGGAATAGCAGCACGTGCCTGTGGCCTCGTGAGTTTAGAACCCATGAAGGTCGCTGAAATCCTCAAAGATCGTCCATCTTGGTTCCGTGACTGTCGATGTGTCGAGACTCTGAATGTTATACCCACTGGAAATGGTGGTACTATCGAGCTTGTCAACACTCAGATTTATGCTCCTACAACATTAGCAGCAGCTCGTGACTTTTGGACGCTGAGATATAGTACAAGTCTAGAAGATGGAAGCTATGTGGTCTGTGAGAGATCACTCACTTCTGCAACTGGTGGCCCCAATGGTCCACTTTCTTCAAGCTTCGTGAGAGCCAAAATGCTGTCAAGCGGGTTTCTTATCCGTCCTTGTGATGGTGGTGGTTCCATTATTCACATCGTTGATCATGTGGACTTGGATGTCTCAAGTGTTCCTGAAGTCCTCAGGCCTCTTTATGAGTCTTCCAAAATCCTTGCTCAAAAAATGACTGTCGCTGCTCTGAGACATGTGCGCCAAATTGCTCAAGAGACTAGTGGAGAAGTCCAGTATAGTGGTGGACGCCAGCCTGCAGTTTTAAGGACTTTCAGCCAGAGACTCTGCCGGGGTTTCAATGATGCTGTAAATGGTTTTGTCGATGATGGATGGTCTCCAATGAGTAGTGATGGAGGAGAGGATATTACGATCATGATTAACTCTTCCTCTGCTAAATTTGCTGGCTCCCAATACGGTAGCTCATTTCTTCCAAGTTTTGGAAGTGGTGTCCTCTGTGCCAAAGCTTCTATGCTGTTGCAGAATGTTCCACCCCTTGTATTGATTCGGTTCCTGAGAGAACACCGAGCTGAATGGGCAGACTATGGTGTCGATGCCTATTCTGCTGCATCTCTCAGAGCAACTCCATATGCTGTTCCATGCGTCAGAACCGGTGGGTTCCCGAGTAACCAAGTCATTCTTCCTCTCGCACAGACACTCGAACATGAAGAGTTTCTCGAAGTGGTTAGACTTGGAGGTCATGCTTACTCACCTGAAGACATGGGCTTATCCCGGGATATGTATTTACTGCAGCTTTGTAGCGGCGTTGATGAAAATGTGGTTGGAGGTTGTGCTCAGCTTGTCTTTGCCCCAATCGATGAATCATTTGCTGATGATGCACCTTTGCTTCCTTCTGGTTTCCGTGTCATACCACTCGACCAAAAAACAAATCCGAATGATCATCAATCTGCAAGTCGAACACGGGATCTAGCATCGTCCCTAGATGGTTCCACCAAAACCGATTCGGAAACAAACTCTAGATTGGTCTTAACAATAGCCTTCCAGTTCACGTTTGATAACCATTCCAGAGACAATGTTGCTACAATGGCGAGACAGTATGTGAGGAACGTTGTTGGTTCGATTCAGAGAGTGGCTCTAGCCATTACGCCTCGTCCTGGCTCAATGCAACTTCCCACTTCCCCTGAAGCTCTCACTCTTGTCCGTTGGATCACCCGTAGTTACAGTATTCATACAGGTGCAGATCTGTTTGGAGCTGATTCTCAGTCCTGTGGAGGAGACACATTGCTTAAGCAACTCTGGGACCATAGTGATGCCATATTGTGCTGCTCCCTGAAAACTAATGCCTCACCGGTATTCACATTTGCAAACCAAGCTGGTTTAGACATGCTTGAAACTACACTTGTGGCACTTCAGGATATAATGCTCGACAAAACACTTGATGACTCTGGTCGTAGAGCTCTTTGCTCCGAGTTCGCCAAGATCATGCAGCAGGGATATGCGAATCTTCCGGCAGGAATATGTGTGTCGAGCATGGGCAGACCGGTTTCGTATGAGCAAGCGACGGTGTGGAAAGTTGTTGATGACAACGAATCAAACCACTGCTTGGCTTTTACCCTCGTTAGTTGGTCGTTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009799 GO:0009855 GO:0009880 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009943 GO:0009944 GO:0009955 GO:0010014 GO:0010016 GO:0010072 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048507 GO:0048508 GO:0048532 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065001 GO:0065007 GO:0080060 GO:0080090 GO:0090421 GO:0090567 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox MEKHLA START

Protein Analysis

841

Amino Acids

92.4

Weight (kDa)

5.99

Isoelectric Point (pI)

44.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	21 - 79	5.6e-16	Homeodomain
START	PF01852	170 - 378	1.5e-51	START domain
MEKHLA	PF08670	694 - 840	2.5e-45	MEKHLA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30490 AT2G34710
fragaria_vesca	FvH4_3g10070 FvH4_3g10070
malus_domestica	MD05G1273700.v1.1 MD10G1253500.v1.1
prunus_persica	Prupe.4G090100_v2.0.a1
pyrus_communis	pycom05g25510 pycom10g20910
rosa_chinensis	RchiOBHm_Chr5g0015931
rosa_laevigata	RLG00000032232
rosa_multiflora	Rmu_sc0001878.1_g000010
rosa_roxburghii	Rroxscaffold_1G00060660
rosa_rugosa	Rorug05G0030500
rosa_samantha	Rh5BG122800
rosa_wichuraiana	Rw5G010700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	1037, 1475, 1623
AccB7I	CCANNNNNTGG	2 cut(s)	1367, 2491
AccI	GTMKAC	1 cut(s)	561
AccIII	TCCGGA	1 cut(s)	595
AciI	CCGC	4 cut(s)	512, 527, 969, 1689
AclI	AACGTT	1 cut(s)	1995
AclWI	GGATC	2 cut(s)	1860, 2102
AcsI	RAATTY	1 cut(s)	1325
AcuI	CTGAAG	5 cut(s)	242, 1074, 1662, 2091, 2282
AcvI	CACGTG	1 cut(s)	650
AcyI	GRCGYC	1 cut(s)	1177
AfaI	GTAC	3 cut(s)	65, 775, 856
AfiI	CCNNNNNNNGG	6 cut(s)	44, 541, 992, 1367, 2042, 2491
AflII	CTTAAG	1 cut(s)	2174
AflIII	ACRYGT	1 cut(s)	1123
AgeI	ACCGGT	3 cut(s)	1538, 2236, 2428
AgsI	TTSAA	4 cut(s)	92, 939, 1228, 2279
AhlI	ACTAGT	1 cut(s)	1148
AjnI	CCWGG	2 cut(s)	589, 2041
AjuI	GAANNNNNNNTTGG	4 cut(s)	1551, 1583, 1692, 1724
Alw21I	GWGCWC	2 cut(s)	1723, 2347
AlwI	GGATC	2 cut(s)	1860, 2102
AlwNI	CAGNNNCTG	1 cut(s)	554
Ama87I	CYCGRG	2 cut(s)	1549, 1659
Aor13HI	TCCGGA	1 cut(s)	595
AoxI	GGCC	3 cut(s)	658, 916, 1064
ApeKI	GCWGC	9 cut(s)	445, 644, 821, 824, 1112, 1493, 1678, 2211, 2374
ApoI	RAATTY	1 cut(s)	1325
AsiGI	ACCGGT	3 cut(s)	1538, 2236, 2428
Asp700I	GAANNNNTTC	2 cut(s)	356, 1599
AspLEI	GCGC	1 cut(s)	1131
AspS9I	GGNCC	5 cut(s)	568, 593, 917, 926, 2188
AsuC2I	CCSGG	3 cut(s)	1220, 1660, 1661
AsuHPI	GGTGA	3 cut(s)	1629, 2089, 2226
AvaI	CYCGRG	2 cut(s)	1549, 1659
AvaII	GGWCC	4 cut(s)	568, 593, 926, 2188
AxyI	CCTNAGG	1 cut(s)	1061
BanII	GRGCYC	1 cut(s)	2347
BauI	CACGAG	2 cut(s)	662, 828
BbrPI	CACGTG	1 cut(s)	650
BbsI	GAAGAC	4 cut(s)	148, 248, 1071, 1650
Bbv12I	GWGCWC	2 cut(s)	1723, 2347
BbvCI	CCTCAGC	1 cut(s)	471
BbvI	GCAGC	9 cut(s)	457, 656, 833, 836, 1099, 1480, 1690, 2198, 2386
BccI	CCATC	8 cut(s)	295, 718, 863, 986, 1250, 1254, 1274, 1865
BciT130I	CCWGG	2 cut(s)	591, 2043
BclI	TGATCA	2 cut(s)	1021, 1825
BcnI	CCSGG	3 cut(s)	1220, 1660, 1661
BcuI	ACTAGT	1 cut(s)	1148
BfaI	CTAG	7 cut(s)	129, 863, 1149, 1856, 1868, 1905, 2024
BfmI	CTRYAG	4 cut(s)	546, 631, 1185, 1676
BfrI	CTTAAG	1 cut(s)	2174
BglII	AGATCT	1 cut(s)	2128
BlpI	GCTNAGC	1 cut(s)	1722
Bme1390I	CCNGG	5 cut(s)	591, 1220, 1660, 1661, 2043
Bme18I	GGWCC	4 cut(s)	568, 593, 926, 2188
BmeT110I	CYCGRG	2 cut(s)	1549, 1659
BmgT120I	GGNCC	5 cut(s)	568, 593, 917, 926, 2188
BmrFI	CCNGG	5 cut(s)	591, 1220, 1660, 1661, 2043
BmrI	ACTGGG	1 cut(s)	574
BmsI	GCATC	7 cut(s)	475, 1222, 1471, 1505, 1753, 1868, 2188
BmuI	ACTGGG	1 cut(s)	574
BoxI	GACNNNNGTC	1 cut(s)	2334
BpiI	GAAGAC	4 cut(s)	148, 248, 1071, 1650
BplI	GAGNNNNNCTC	2 cut(s)	2005, 2037
Bpu10I	CCTNAGC	1 cut(s)	471
Bpu1102I	GCTNAGC	1 cut(s)	1722
BpuEI	CTTGAG	3 cut(s)	119, 1027, 1125
BpuMI	CCSGG	3 cut(s)	1220, 1660, 1661
Bsa29I	ATCGAT	1 cut(s)	1743
BsaAI	YACGTR	1 cut(s)	650
BsaHI	GRCGYC	1 cut(s)	1177
BsaI	GGTCTC	2 cut(s)	512, 1269
BsaJI	CCNNGG	4 cut(s)	18, 522, 1219, 1659
BsaWI	WCCGGW	4 cut(s)	595, 1538, 2236, 2428
Bsc4I	CCNNNNNNNGG	6 cut(s)	44, 541, 992, 1367, 2042, 2491
Bse118I	RCCGGY	3 cut(s)	1538, 2236, 2428
Bse1I	ACTGG	5 cut(s)	569, 766, 916, 1162, 1930
Bse21I	CCTNAGG	1 cut(s)	1061
Bse3DI	GCAATG	1 cut(s)	2168
BseAI	TCCGGA	1 cut(s)	595
BseBI	CCWGG	2 cut(s)	591, 2043
BseCI	ATCGAT	1 cut(s)	1743
BseDI	CCNNGG	4 cut(s)	18, 522, 1219, 1659
BseGI	GGATG	4 cut(s)	466, 588, 1042, 1265
BseLI	CCNNNNNNNGG	6 cut(s)	44, 541, 992, 1367, 2042, 2491
BseMI	GCAATG	1 cut(s)	2168
BseNI	ACTGG	5 cut(s)	569, 766, 916, 1162, 1930
BseRI	GAGGAG	3 cut(s)	530, 1299, 2175
BseXI	GCAGC	9 cut(s)	457, 656, 833, 836, 1099, 1480, 1690, 2198, 2386
BseYI	CCCAGC	1 cut(s)	490
BsgI	GTGCAG	1 cut(s)	2145
BshFI	GGCC	3 cut(s)	660, 918, 1066
BshTI	ACCGGT	3 cut(s)	1538, 2236, 2428
BshVI	ATCGAT	1 cut(s)	1743
BsiHKAI	GWGCWC	2 cut(s)	1723, 2347
BsiHKCI	CYCGRG	2 cut(s)	1549, 1659
BsiSI	CCGG	9 cut(s)	57, 80, 596, 1219, 1539, 1660, 2237, 2396, 2429
BslFI	GGGAC	4 cut(s)	150, 403, 1849, 2201
BslI	CCNNNNNNNGG	6 cut(s)	44, 541, 992, 1367, 2042, 2491
BsmFI	GGGAC	4 cut(s)	150, 403, 1849, 2201
BsnI	GGCC	3 cut(s)	660, 918, 1066
Bso31I	GGTCTC	2 cut(s)	512, 1269
BsoBI	CYCGRG	2 cut(s)	1549, 1659
Bsp1286I	GDGCHC	2 cut(s)	1723, 2347
Bsp13I	TCCGGA	1 cut(s)	595
Bsp1720I	GCTNAGC	1 cut(s)	1722
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	4 cut(s)	512, 527, 969, 1689
BspANI	GGCC	3 cut(s)	660, 918, 1066
BspDI	ATCGAT	1 cut(s)	1743
BspEI	TCCGGA	1 cut(s)	595
BspHI	TCATGA	2 cut(s)	360, 1302
BspMAI	CTGCAG	3 cut(s)	635, 1189, 1680
BspPI	GGATC	2 cut(s)	1860, 2102
BspTI	CTTAAG	1 cut(s)	2174
BspTNI	GGTCTC	2 cut(s)	512, 1269
BsrDI	GCAATG	1 cut(s)	2168
BsrFI	RCCGGY	3 cut(s)	1538, 2236, 2428
BsrI	ACTGG	5 cut(s)	569, 766, 916, 1162, 1930
BssAI	RCCGGY	3 cut(s)	1538, 2236, 2428
BssECI	CCNNGG	4 cut(s)	18, 522, 1219, 1659
BssNI	GRCGYC	1 cut(s)	1177
BssSI	CACGAG	2 cut(s)	662, 828
BssT1I	CCWWGG	2 cut(s)	18, 522
Bst2BI	CACGAG	2 cut(s)	662, 828
Bst2UI	CCWGG	2 cut(s)	591, 2043
Bst4CI	ACNGT	7 cut(s)	265, 728, 1108, 1346, 1983, 2111, 2452
Bst6I	CTCTTC	3 cut(s)	300, 1318, 1590
BstACI	GRCGYC	1 cut(s)	1177
BstAFI	CTTAAG	1 cut(s)	2174
BstAPI	GCANNNNNTGC	1 cut(s)	650
BstBAI	YACGTR	1 cut(s)	650
BstC8I	GCNNGC	4 cut(s)	1181, 1185, 1333, 2445
BstDSI	CCRYGG	1 cut(s)	18
BstENI	CCTNNNNNAGG	2 cut(s)	42, 539
BstF5I	GGATG	4 cut(s)	466, 588, 1042, 1265
BstHHI	GCGC	1 cut(s)	1131
BstMWI	GCNNNNNNNGC	9 cut(s)	442, 472, 650, 1328, 1463, 1490, 1763, 1973, 2258
BstNI	CCWGG	2 cut(s)	591, 2043
BstNSI	RCATGY	2 cut(s)	1127, 2275
BstPAI	GACNNNNGTC	1 cut(s)	2334
BstSCI	CCNGG	5 cut(s)	589, 1218, 1658, 1659, 2041
BstSFI	CTRYAG	4 cut(s)	546, 631, 1185, 1676
BstV1I	GCAGC	9 cut(s)	457, 656, 833, 836, 1099, 1480, 1690, 2198, 2386
BstV2I	GAAGAC	4 cut(s)	148, 248, 1071, 1650
BstX2I	RGATCY	2 cut(s)	1852, 2128
BstXI	CCANNNNNNTGG	2 cut(s)	578, 1169
BstYI	RGATCY	2 cut(s)	1852, 2128
Bsu15I	ATCGAT	1 cut(s)	1743
Bsu36I	CCTNAGG	1 cut(s)	1061
BsuRI	GGCC	3 cut(s)	660, 918, 1066
BsuTUI	ATCGAT	1 cut(s)	1743
BtgI	CCRYGG	1 cut(s)	18
BtsCI	GGATG	4 cut(s)	466, 588, 1042, 1265
BtsI	GCAGTG	3 cut(s)	378, 640, 2485
BtsIMutI	CAGTG	5 cut(s)	270, 378, 640, 759, 2485
Cac8I	GCNNGC	4 cut(s)	1181, 1185, 1333, 2445
CaiI	CAGNNNCTG	1 cut(s)	554
CciI	TCATGA	2 cut(s)	360, 1302
CfoI	GCGC	1 cut(s)	1131
Cfr10I	RCCGGY	3 cut(s)	1538, 2236, 2428
Cfr13I	GGNCC	5 cut(s)	568, 593, 917, 926, 2188
Cfr9I	CCCGGG	1 cut(s)	1659
ClaI	ATCGAT	1 cut(s)	1743
CseI	GACGC	3 cut(s)	850, 1185, 1519
Csp6I	GTAC	3 cut(s)	64, 774, 855
CspAI	ACCGGT	3 cut(s)	1538, 2236, 2428
CspCI	CAANNNNNGTGG	2 cut(s)	616, 651
CviQI	GTAC	3 cut(s)	64, 774, 855
DrdI	GACNNNNNNGTC	3 cut(s)	1037, 1475, 1623
DseDI	GACNNNNNNGTC	3 cut(s)	1037, 1475, 1623
Eam1104I	CTCTTC	3 cut(s)	300, 1318, 1590
EarI	CTCTTC	3 cut(s)	300, 1318, 1590
EciI	GGCGGA	1 cut(s)	542
Ecl136II	GAGCTC	1 cut(s)	2345
Eco130I	CCWWGG	2 cut(s)	18, 522
Eco147I	AGGCCT	1 cut(s)	1066
Eco24I	GRGCYC	1 cut(s)	2347
Eco31I	GGTCTC	2 cut(s)	512, 1269
Eco47I	GGWCC	4 cut(s)	568, 593, 926, 2188
Eco53kI	GAGCTC	1 cut(s)	2345
Eco57I	CTGAAG	5 cut(s)	242, 1074, 1662, 2091, 2282
Eco72I	CACGTG	1 cut(s)	650
Eco81I	CCTNAGG	1 cut(s)	1061
Eco88I	CYCGRG	2 cut(s)	1549, 1659
EcoICRI	GAGCTC	1 cut(s)	2345
EcoNI	CCTNNNNNAGG	2 cut(s)	42, 539
EcoRII	CCWGG	2 cut(s)	589, 2041
EcoT14I	CCWWGG	2 cut(s)	18, 522
EcoT38I	GRGCYC	1 cut(s)	2347
ErhI	CCWWGG	2 cut(s)	18, 522
FalI	AAGNNNNNCTT	2 cut(s)	1551, 1583
FaqI	GGGAC	4 cut(s)	150, 403, 1849, 2201
FauI	CCCGC	1 cut(s)	962
FauNDI	CATATG	1 cut(s)	1516
FbaI	TGATCA	2 cut(s)	1021, 1825
FblI	GTMKAC	1 cut(s)	561
FokI	GGATG	4 cut(s)	453, 595, 1049, 1272
FriOI	GRGCYC	1 cut(s)	2347
FspBI	CTAG	7 cut(s)	129, 863, 1149, 1856, 1868, 1905, 2024
GlaI	GCGC	1 cut(s)	1130
GsaI	CCCAGC	1 cut(s)	494
HaeIII	GGCC	3 cut(s)	660, 918, 1066
HapII	CCGG	9 cut(s)	57, 80, 596, 1219, 1539, 1660, 2237, 2396, 2429
HgaI	GACGC	3 cut(s)	850, 1185, 1519
HhaI	GCGC	1 cut(s)	1131
Hin1I	GRCGYC	1 cut(s)	1177
Hin6I	GCGC	1 cut(s)	1129
HinP1I	GCGC	1 cut(s)	1129
HincII	GTYRAC	3 cut(s)	484, 562, 790
HindII	GTYRAC	3 cut(s)	484, 562, 790
HindIII	AAGCTT	3 cut(s)	293, 940, 1392
HpaI	GTTAAC	1 cut(s)	484
HpaII	CCGG	9 cut(s)	57, 80, 596, 1219, 1539, 1660, 2237, 2396, 2429
HphI	GGTGA	3 cut(s)	1629, 2089, 2226
Hpy166II	GTNNAC	8 cut(s)	268, 484, 562, 790, 929, 1030, 1175, 1935
Hpy8I	GTNNAC	8 cut(s)	268, 484, 562, 790, 929, 1030, 1175, 1935
Hpy99I	CGWCG	1 cut(s)	2452
HpyAV	CCTTC	3 cut(s)	676, 1788, 1936
HpyCH4III	ACNGT	7 cut(s)	265, 728, 1108, 1346, 1983, 2111, 2452
HpyCH4IV	ACGT	5 cut(s)	66, 439, 649, 1937, 1995
HpyF10VI	GCNNNNNNNGC	9 cut(s)	442, 472, 650, 1328, 1463, 1490, 1763, 1973, 2258
HpySE526I	ACGT	5 cut(s)	66, 439, 649, 1937, 1995
Hsp92I	GRCGYC	1 cut(s)	1177
HspAI	GCGC	1 cut(s)	1129
Kpn2I	TCCGGA	1 cut(s)	595
Ksp22I	TGATCA	2 cut(s)	1021, 1825
KspAI	GTTAAC	1 cut(s)	484
LmnI	GCTCC	5 cut(s)	811, 1340, 2138, 2219, 2357
Lsp1109I	GCAGC	9 cut(s)	457, 656, 833, 836, 1099, 1480, 1690, 2198, 2386
LweI	GCATC	7 cut(s)	475, 1222, 1471, 1505, 1753, 1868, 2188
MaeI	CTAG	7 cut(s)	129, 863, 1149, 1856, 1868, 1905, 2024
MaeII	ACGT	5 cut(s)	66, 439, 649, 1937, 1995
MaeIII	GTNAC	5 cut(s)	176, 722, 830, 1553, 2105
MflI	RGATCY	2 cut(s)	1852, 2128
MhlI	GDGCHC	2 cut(s)	1723, 2347
MluCI	AATT	2 cut(s)	1134, 1325
MlyI	GAGTC	7 cut(s)	26, 254, 422, 736, 1085, 1206, 2324
MmeI	TCCRAC	3 cut(s)	360, 1690, 2072
MroI	TCCGGA	1 cut(s)	595
MroXI	GAANNNNTTC	2 cut(s)	356, 1599
MseI	TTAA	5 cut(s)	483, 1193, 1308, 1916, 2175
MslI	CAYNNNNRTG	2 cut(s)	2121, 2196
MspA1I	CMGCKG	1 cut(s)	408
MspCI	CTTAAG	1 cut(s)	2174
MspI	CCGG	9 cut(s)	57, 80, 596, 1219, 1539, 1660, 2237, 2396, 2429
MspR9I	CCNGG	5 cut(s)	591, 1220, 1660, 1661, 2043
MvaI	CCWGG	2 cut(s)	591, 2043
MwoI	GCNNNNNNNGC	9 cut(s)	442, 472, 650, 1328, 1463, 1490, 1763, 1973, 2258
NciI	CCSGG	3 cut(s)	1220, 1660, 1661
NcoI	CCATGG	1 cut(s)	18
NdeI	CATATG	1 cut(s)	1516
NmuCI	GTSAC	2 cut(s)	722, 830
NspI	RCATGY	2 cut(s)	1127, 2275
PagI	TCATGA	2 cut(s)	360, 1302
PceI	AGGCCT	1 cut(s)	1066
PciI	ACATGT	1 cut(s)	1123
PcsI	WCGNNNNNNNCGW	1 cut(s)	223
PdmI	GAANNNNTTC	2 cut(s)	356, 1599
PflFI	GACNNNGTC	1 cut(s)	566
PflMI	CCANNNNNTGG	2 cut(s)	1367, 2491
PinAI	ACCGGT	3 cut(s)	1538, 2236, 2428
PleI	GAGTC	7 cut(s)	26, 253, 421, 736, 1084, 1206, 2324
PmaCI	CACGTG	1 cut(s)	650
PmlI	CACGTG	1 cut(s)	650
PpsI	GAGTC	7 cut(s)	26, 253, 421, 736, 1084, 1206, 2324
Ppu21I	YACGTR	1 cut(s)	650
PscI	ACATGT	1 cut(s)	1123
PshAI	GACNNNNGTC	1 cut(s)	2334
Psp124BI	GAGCTC	1 cut(s)	2347
Psp1406I	AACGTT	1 cut(s)	1995
Psp6I	CCWGG	2 cut(s)	589, 2041
PspCI	CACGTG	1 cut(s)	650
PspFI	CCCAGC	1 cut(s)	490
PspGI	CCWGG	2 cut(s)	589, 2041
PspPI	GGNCC	5 cut(s)	568, 593, 917, 926, 2188
PstI	CTGCAG	3 cut(s)	635, 1189, 1680
PstNI	CAGNNNCTG	1 cut(s)	554
PsuI	RGATCY	2 cut(s)	1852, 2128
PsyI	GACNNNGTC	1 cut(s)	566
PvuII	CAGCTG	1 cut(s)	408
RsaI	GTAC	3 cut(s)	65, 775, 856
RsaNI	GTAC	3 cut(s)	64, 774, 855
RseI	CAYNNNNRTG	2 cut(s)	2121, 2196
SacI	GAGCTC	1 cut(s)	2347
SalI	GTCGAC	1 cut(s)	560
SaqAI	TTAA	5 cut(s)	483, 1193, 1308, 1916, 2175
Sau96I	GGNCC	5 cut(s)	568, 593, 917, 926, 2188
SchI	GAGTC	7 cut(s)	26, 254, 422, 736, 1085, 1206, 2324
ScrFI	CCNGG	5 cut(s)	591, 1220, 1660, 1661, 2043
SduI	GDGCHC	2 cut(s)	1723, 2347
SfaNI	GCATC	7 cut(s)	475, 1222, 1471, 1505, 1753, 1868, 2188
SfcI	CTRYAG	4 cut(s)	546, 631, 1185, 1676
SinI	GGWCC	4 cut(s)	568, 593, 926, 2188
SmaI	CCCGGG	1 cut(s)	1661
SmiMI	CAYNNNNRTG	2 cut(s)	2121, 2196
SmlI	CTYRAG	4 cut(s)	98, 1042, 1140, 2174
SmoI	CTYRAG	4 cut(s)	98, 1042, 1140, 2174
SpeI	ACTAGT	1 cut(s)	1148
Sse9I	AATT	2 cut(s)	1134, 1325
SseBI	AGGCCT	1 cut(s)	1066
SsiI	CCGC	4 cut(s)	512, 527, 969, 1689
SspMI	CTAG	7 cut(s)	129, 863, 1149, 1856, 1868, 1905, 2024
SstI	GAGCTC	1 cut(s)	2347
StuI	AGGCCT	1 cut(s)	1066
StyD4I	CCNGG	5 cut(s)	589, 1218, 1658, 1659, 2041
StyI	CCWWGG	2 cut(s)	18, 522
TaaI	ACNGT	7 cut(s)	265, 728, 1108, 1346, 1983, 2111, 2452
TaiI	ACGT	5 cut(s)	69, 442, 652, 1940, 1998
TasI	AATT	2 cut(s)	1134, 1325
TatI	WGTACW	1 cut(s)	854
TauI	GCSGC	1 cut(s)	1692
Tru1I	TTAA	5 cut(s)	483, 1193, 1308, 1916, 2175
Tru9I	TTAA	5 cut(s)	483, 1193, 1308, 1916, 2175
TscAI	CASTG	5 cut(s)	270, 385, 640, 766, 2492
TseFI	GTSAC	2 cut(s)	722, 830
TseI	GCWGC	9 cut(s)	445, 644, 821, 824, 1112, 1493, 1678, 2211, 2374
Tsp45I	GTSAC	2 cut(s)	722, 830
TspDTI	ATGAA	9 cut(s)	302, 349, 377, 599, 695, 1608, 1713, 1761, 2105
TspGWI	ACGGA	4 cut(s)	710, 971, 1778, 2078
TspMI	CCCGGG	1 cut(s)	1659
TspRI	CASTG	5 cut(s)	270, 385, 640, 766, 2492
Tth111I	GACNNNGTC	1 cut(s)	566
Van91I	CCANNNNNTGG	2 cut(s)	1367, 2491
Vha464I	CTTAAG	1 cut(s)	2174
VpaK11BI	GGWCC	4 cut(s)	568, 593, 926, 2188
XagI	CCTNNNNNAGG	2 cut(s)	42, 539
XapI	RAATTY	1 cut(s)	1325
XbaI	TCTAGA	2 cut(s)	862, 1904
XceI	RCATGY	2 cut(s)	1127, 2275
XcmI	CCANNNNNNNNNTGG	2 cut(s)	383, 1169
XmaI	CCCGGG	1 cut(s)	1659
XmiI	GTMKAC	1 cut(s)	561
XmnI	GAANNNNTTC	2 cut(s)	356, 1599
XspI	CTAG	7 cut(s)	129, 863, 1149, 1856, 1868, 1905, 2024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.