Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0014923

Physical Location & Seq

Genomic Coordinates Reverse (-)

5848898 .. 5855959

Gene Structure 7062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g10070.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2544 bp

ATGGCACTTGTTATGCACAAAGAAAAACACAACAACAATCAAATGGATTCAAGCAAGTATGTGAGGTACACACCAGAGCAAGTTGAGGCCTTGGAGAGGGTCTACTCTGAATGCCCAAAGCCTAGTTCTTTGAGAAGGCAGCAGCTCATTAGGGAGTGTCCTATTCTTTCTAACATTGAGCCCAAACAGATCAAAGTCTGGTTCCAGAATCGAAGATGTCGCGAAAAGCAGAGGAAGGAATCGTCTCGACTCACAACAGTGAATAGAAAGCTGTCTGCCATGAATAAGCTGTTAATGGAAGAAAATGACCGCTTACAGAAGCAAGTCTCTCATTTGGTTTATGAGAATGGATTCATGAAAAATAAACTGCATAGTGCATCTGGAACGACCACAGACACTAGCTGTGAGTCTGTGGTCATGAATGGTCAGCACCAACAACAGCACAACCCAACTCCCCAGCATCCTCAAAGGGATGCTAACAACCCAGCTGGTCTTCTAGCAATTGCGGAGGAGACCTTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTTGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAACACCAGTGGGGTAGCAGCACGAGCTTGCGGTCTTGTGAGCCTTGAGCCCACAAAGGTCGCGGAAATTCTCAAAGATCGTCCATCGTGGTTTCGGGATTGCCGTTGCCTTGATGTACTGAGTATAATTCCTGCTGGGAATGGTGGAACAATTGAGCTCTTATACATGCAGATTTATGCTCCGACAACATTAGCTGCAGCTCGTGACTTTTGGACGCTAAGATATACTACAACACTGGAAGATGGTAGTCTTGTGGTCTGCGAGAGGTCATTGACTTCTTCTACTGGTGGCCCAACAGGGACCCCATCTCCAAGTTTTGTGAGAGCCGAGATGCTTCCTAGTGGCTTTCTTATCCGACCGTGTGAGGGTGGTGGCTCCATTATTCACATCGTCGATCATGTCGATTTAGATGCCTGGAGCGTTCCTGAAGTTCTGAGGTCACTTTATGAATCATCCAAAATTATTGCTCAAAAAATGACTGTTGCAGCCCTGCGTCACATAAGGCAGATAGCTCAAGAGGCCACTGGAGAAATTCAATATGCTGGGGGTCGCCAGCCTGCTGTATTGAGAACTTTTAGTCAAAGGCTCTGCAGAGGTTTCAATGATGCTGTTAACGGGTTTGCGGATGATGGTTGGTCCCTTTTGGGTAGTGATGGTGCGGAGGATGTGACTATTGCCATAAACTCATCTCCAAACAAGTTTCTTGGTTCACAGTATAACACATCAATTTTTCCATCTTTTGGAGGAGGGGTGCTGTGTGCCAAGGCATCAATGTTGCTGCAGAGTGTTCCTCCTGCTCTGCTTGTTCGTTTTCTGAGGGAGCACCGATCAGAGTGGGCTGACTATGGGGTTGATGCATACTCTGCTGCATGTCTTAAAGCTAGCCCTTACGCAGTTCCTTGTGCAAGACCAGGTGGCTTCCCAAGCAGCCAGGTCATTCTACCTCTTGCGCCCACTGTGGAGAATGAGGAGTTCTTAGAGGTTGTTCGGCTAGAGGGTCATGCTTACTCTCCTGAAGATGTTGCTTTGGCACGAGATATGTTCTTATTACAGATGTGCAGCGGGGTTGATGAAAATGCAGTTGGTTCCTGTGCTCAGCTTGTGTTTGCACCTATAGATGAATCATTTGCCGATGACGCTCCTCTGTTGCCATCTGGTTTTCATGTCATACCATTGGATGCCAAAACAGACGGACCAGCTACAAATCGGACATTGGATTTAGCCTCTACACTTGAAGTAGGAGCCAGCAGTGCTCGTCGAGTTAATGAGGGTGATGCAAATAGTTACAACCTTAGGTCAGTTCTGACCATAGCCTTCCAATTTACCTTTGAGAATCACATGCGCGACAGTGTAGCAGCTATGGCTCGCCAGTATGTGCGCGGTGTTGTTAGCTCTGTTCAAAGGGTAGCTATGGCTATTGCCCCTTCCCGTCTCAGCTCCCAAATAGGACCAAAAGCCCTTCCTGGCTCTCCTGAGGCTCAAACTTTGGCACGCTGGATTTTTCAGAGCTACAGGATCCACACTGGGGCAGAGATCTTTCGACTCGAGTCCCCATCTGGTGATGCTGTTCTGAAGCAGCTTTGGAATCATCCTGATGCAATCATGTGTTGCTCTGTGAAGACAAATGCATCTCCGGTGTTCACTTTTGCAAACCAGGCAGGCCTTGACATGCTTGAAACAACTCTTGTGGCCCTCCAAGACATCATGCTTGACAAGATTCTGGATGAAGCTGGACGGAAAGTTCTCTGCTCGGAGTTCTCCAAAATCATGCTCCAGGGCTTTGCGTTTCTGCCAGCTGGTATGTGTGCTTCTAGCATGGGCAGGCCAGTATCTTATGAGCAGGCTGTTGCGTGGAAAGTTGTTAACGATGAAGATTCCAACCATTGCCTGGCACTCATGTTCACAAACTGGTCTTTTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009799 GO:0009855 GO:0009880 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009943 GO:0009944 GO:0009955 GO:0010014 GO:0010016 GO:0010072 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048507 GO:0048508 GO:0048532 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065001 GO:0065007 GO:0080060 GO:0080090 GO:0090421 GO:0090567 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox MEKHLA START

Protein Analysis

848

Amino Acids

92.77

Weight (kDa)

6.07

Isoelectric Point (pI)

50.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	19 - 77	1.4e-15	Homeodomain
START	PF01852	168 - 375	4.8e-51	START domain
MEKHLA	PF08670	702 - 846	9.1e-44	MEKHLA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30490 AT2G34710
fragaria_vesca	FvH4_3g10070 FvH4_3g10070
malus_domestica	MD05G1273700.v1.1 MD10G1253500.v1.1
prunus_persica	Prupe.4G090100_v2.0.a1
pyrus_communis	pycom05g25510 pycom10g20910
rosa_chinensis	RchiOBHm_Chr5g0015931
rosa_laevigata	RLG00000032232
rosa_multiflora	Rmu_sc0001878.1_g000010
rosa_roxburghii	Rroxscaffold_1G00060660
rosa_rugosa	Rorug05G0030500
rosa_samantha	Rh5BG122800
rosa_wichuraiana	Rw5G010700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1361, 2509
AccI	GTMKAC	1 cut(s)	102
AccII	CGCG	4 cut(s)	222, 683, 1965, 2001
AccIII	TCCGGA	1 cut(s)	589
AciI	CCGC	9 cut(s)	310, 506, 619, 651, 683, 1244, 1280, 1683, 2001
AclWI	GGATC	2 cut(s)	2131, 2144
AcsI	RAATTY	2 cut(s)	687, 1152
AcuI	CTGAAG	3 cut(s)	1068, 1656, 2213
AfaI	GTAC	2 cut(s)	68, 738
AfiI	CCNNNNNNNGG	6 cut(s)	96, 535, 986, 1361, 2146, 2509
AgsI	TTSAA	6 cut(s)	51, 1157, 1222, 1856, 2021, 2297
AjnI	CCWGG	8 cut(s)	583, 1034, 1531, 1551, 2083, 2274, 2394, 2508
AjuI	GAANNNNNNNTTGG	4 cut(s)	109, 141, 1686, 1718
AleI	CACNNNNGTG	1 cut(s)	257
AloI	GAACNNNNNNTCC	2 cut(s)	2346, 2378
Alw21I	GWGCWC	4 cut(s)	780, 1446, 1717, 1876
Alw26I	GTCTC	4 cut(s)	249, 331, 506, 2057
AlwI	GGATC	2 cut(s)	2131, 2144
Ama87I	CYCGRG	1 cut(s)	2165
Aor13HI	TCCGGA	1 cut(s)	589
AoxI	GGCC	6 cut(s)	87, 910, 1140, 2281, 2310, 2444
ApoI	RAATTY	2 cut(s)	687, 1152
Asp700I	GAANNNNTTC	1 cut(s)	350
AspLEI	GCGC	3 cut(s)	1573, 1965, 2001
AspS9I	GGNCC	8 cut(s)	562, 587, 911, 921, 1257, 1814, 2069, 2311
AsuHPI	GGTGA	2 cut(s)	1904, 2192
AsuNHI	GCTAGC	1 cut(s)	1502
AvaI	CYCGRG	1 cut(s)	2165
AvaII	GGWCC	6 cut(s)	562, 587, 921, 1257, 1814, 2069
AxyI	CCTNAGG	2 cut(s)	1913, 2094
BamHI	GGATCC	1 cut(s)	2136
BanII	GRGCYC	3 cut(s)	183, 672, 780
BarI	GAAGNNNNNNTAC	2 cut(s)	2413, 2445
BauI	CACGAG	3 cut(s)	642, 822, 1653
BbsI	GAAGAC	2 cut(s)	485, 2246
Bbv12I	GWGCWC	4 cut(s)	780, 1446, 1717, 1876
BccI	CCATC	8 cut(s)	712, 857, 934, 1244, 1268, 1363, 1780, 2182
BceAI	ACGGC	1 cut(s)	708
BcgI	CGANNNNNNTGC	2 cut(s)	1013, 1047
BciT130I	CCWGG	8 cut(s)	585, 1036, 1533, 1553, 2085, 2276, 2396, 2510
BcoDI	GTCTC	4 cut(s)	249, 331, 506, 2057
BfaI	CTAG	7 cut(s)	123, 399, 497, 960, 1503, 1613, 2433
BfmI	CTRYAG	5 cut(s)	816, 1210, 1400, 1734, 2131
BglII	AGATCT	1 cut(s)	2154
BlpI	GCTNAGC	1 cut(s)	1716
Bme1390I	CCNGG	8 cut(s)	585, 1036, 1533, 1553, 2085, 2276, 2396, 2510
Bme18I	GGWCC	6 cut(s)	562, 587, 921, 1257, 1814, 2069
BmeT110I	CYCGRG	1 cut(s)	2165
BmgT120I	GGNCC	8 cut(s)	562, 587, 911, 921, 1257, 1814, 2069, 2311
BmiI	GGNNCC	9 cut(s)	203, 563, 922, 923, 997, 1259, 1708, 1864, 2138
BmrFI	CCNGG	8 cut(s)	585, 1036, 1533, 1553, 2085, 2276, 2396, 2510
BmrI	ACTGGG	2 cut(s)	568, 2154
BmtI	GCTAGC	1 cut(s)	1506
BmuI	ACTGGG	2 cut(s)	568, 2154
BoxI	GACNNNNGTC	1 cut(s)	2167
BpiI	GAAGAC	2 cut(s)	485, 2246
BplI	GAGNNNNNCTC	2 cut(s)	1396, 1428
BpmI	CTGGAG	3 cut(s)	1057, 1167, 2378
Bpu1102I	GCTNAGC	1 cut(s)	1716
BpuEI	CTTGAG	2 cut(s)	686, 1119
BsaI	GGTCTC	1 cut(s)	506
BsaJI	CCNNGG	5 cut(s)	90, 516, 534, 1383, 2395
BsaWI	WCCGGW	2 cut(s)	589, 2254
BsaXI	ACNNNNNCTCC	4 cut(s)	913, 943, 1356, 1386
Bsc4I	CCNNNNNNNGG	6 cut(s)	96, 535, 986, 1361, 2146, 2509
Bse21I	CCTNAGG	2 cut(s)	1913, 2094
Bse3DI	GCAATG	1 cut(s)	2503
BseAI	TCCGGA	1 cut(s)	589
BseBI	CCWGG	8 cut(s)	585, 1036, 1533, 1553, 2085, 2276, 2396, 2510
BseDI	CCNNGG	5 cut(s)	90, 516, 534, 1383, 2395
BseGI	GGATG	9 cut(s)	460, 478, 582, 1073, 1252, 1291, 1804, 2209, 2350
BseLI	CCNNNNNNNGG	6 cut(s)	96, 535, 986, 1361, 2146, 2509
BseMI	GCAATG	1 cut(s)	2503
BseMII	CTCAG	6 cut(s)	731, 1046, 1427, 1730, 2068, 2085
BseRI	GAGGAG	4 cut(s)	524, 1380, 1604, 1752
BseYI	CCCAGC	4 cut(s)	456, 484, 755, 1163
BsgI	GTGCAG	1 cut(s)	1699
Bsh1236I	CGCG	4 cut(s)	222, 683, 1965, 2001
Bsh1285I	CGRYCG	1 cut(s)	980
BshFI	GGCC	6 cut(s)	89, 912, 1142, 2283, 2312, 2446
BsiEI	CGRYCG	1 cut(s)	980
BsiHKAI	GWGCWC	4 cut(s)	780, 1446, 1717, 1876
BsiHKCI	CYCGRG	1 cut(s)	2165
BsiSI	CCGG	2 cut(s)	590, 2255
BslFI	GGGAC	3 cut(s)	934, 1243, 2155
BslI	CCNNNNNNNGG	6 cut(s)	96, 535, 986, 1361, 2146, 2509
BsmAI	GTCTC	4 cut(s)	249, 331, 506, 2057
BsmBI	CGTCTC	2 cut(s)	249, 2057
BsmFI	GGGAC	3 cut(s)	934, 1243, 2155
BsmI	GAATGC	1 cut(s)	116
BsnI	GGCC	6 cut(s)	89, 912, 1142, 2283, 2312, 2446
Bso31I	GGTCTC	1 cut(s)	506
BsoBI	CYCGRG	1 cut(s)	2165
Bsp1286I	GDGCHC	6 cut(s)	183, 672, 780, 1446, 1717, 1876
Bsp13I	TCCGGA	1 cut(s)	589
Bsp143I	GATC	6 cut(s)	189, 697, 1015, 1448, 2136, 2154
Bsp1720I	GCTNAGC	1 cut(s)	1716
Bsp68I	TCGCGA	1 cut(s)	222
BspACI	CCGC	9 cut(s)	310, 506, 619, 651, 683, 1244, 1280, 1683, 2001
BspANI	GGCC	6 cut(s)	89, 912, 1142, 2283, 2312, 2446
BspCNI	CTCAG	6 cut(s)	732, 1047, 1428, 1729, 2067, 2086
BspEI	TCCGGA	1 cut(s)	589
BspFNI	CGCG	4 cut(s)	222, 683, 1965, 2001
BspHI	TCATGA	2 cut(s)	354, 417
BspLI	GGNNCC	9 cut(s)	203, 563, 922, 923, 997, 1259, 1708, 1864, 2138
BspMAI	CTGCAG	3 cut(s)	820, 1214, 1404
BspOI	GCTAGC	1 cut(s)	1506
BspPI	GGATC	2 cut(s)	2131, 2144
BspTNI	GGTCTC	1 cut(s)	506
BsrDI	GCAATG	1 cut(s)	2503
BssECI	CCNNGG	5 cut(s)	90, 516, 534, 1383, 2395
BssMI	GATC	6 cut(s)	189, 697, 1015, 1448, 2136, 2154
BssSI	CACGAG	3 cut(s)	642, 822, 1653
BssT1I	CCWWGG	4 cut(s)	90, 516, 534, 1383
Bst2BI	CACGAG	3 cut(s)	642, 822, 1653
Bst2UI	CCWGG	8 cut(s)	585, 1036, 1533, 1553, 2085, 2276, 2396, 2510
Bst4CI	ACNGT	6 cut(s)	259, 981, 1102, 1335, 1579, 1970
BstAPI	GCANNNNNTGC	1 cut(s)	1484
BstDEI	CTNAG	9 cut(s)	740, 839, 1055, 1436, 1597, 1716, 1913, 2054, 2094
BstENI	CCTNNNNNAGG	2 cut(s)	94, 533
BstF5I	GGATG	9 cut(s)	460, 478, 582, 1073, 1252, 1291, 1804, 2209, 2350
BstFNI	CGCG	4 cut(s)	222, 683, 1965, 2001
BstHHI	GCGC	3 cut(s)	1573, 1965, 2001
BstKTI	GATC	6 cut(s)	192, 700, 1018, 1451, 2139, 2157
BstMAI	GTCTC	4 cut(s)	249, 331, 506, 2057
BstMBI	GATC	6 cut(s)	189, 697, 1015, 1448, 2136, 2154
BstMCI	CGRYCG	1 cut(s)	980
BstMWI	GCNNNNNNNGC	8 cut(s)	644, 1139, 1484, 1545, 1757, 1871, 1982, 2276
BstNI	CCWGG	8 cut(s)	585, 1036, 1533, 1553, 2085, 2276, 2396, 2510
BstNSI	RCATGY	4 cut(s)	790, 1494, 1963, 2293
BstPAI	GACNNNNGTC	1 cut(s)	2167
BstSCI	CCNGG	8 cut(s)	583, 1034, 1531, 1551, 2083, 2274, 2394, 2508
BstSFI	CTRYAG	5 cut(s)	816, 1210, 1400, 1734, 2131
BstUI	CGCG	4 cut(s)	222, 683, 1965, 2001
BstV2I	GAAGAC	2 cut(s)	485, 2246
BstX2I	RGATCY	2 cut(s)	2136, 2154
BstXI	CCANNNNNNTGG	1 cut(s)	572
BstYI	RGATCY	2 cut(s)	2136, 2154
Bsu36I	CCTNAGG	2 cut(s)	1913, 2094
BsuRI	GGCC	6 cut(s)	89, 912, 1142, 2283, 2312, 2446
BtsCI	GGATG	9 cut(s)	460, 478, 582, 1073, 1252, 1291, 1804, 2209, 2350
BtsI	GCAGTG	1 cut(s)	1876
BtsIMutI	CAGTG	8 cut(s)	264, 634, 854, 1143, 1575, 1876, 1975, 2142
BtuMI	TCGCGA	1 cut(s)	222
CciI	TCATGA	2 cut(s)	354, 417
CfoI	GCGC	3 cut(s)	1573, 1965, 2001
Cfr13I	GGNCC	8 cut(s)	562, 587, 911, 921, 1257, 1814, 2069, 2311
CseI	GACGC	3 cut(s)	844, 1103, 1766
CsiI	ACCWGGT	1 cut(s)	1531
Csp6I	GTAC	2 cut(s)	67, 737
CspCI	CAANNNNNGTGG	4 cut(s)	610, 645, 2289, 2324
CviQI	GTAC	2 cut(s)	67, 737
DdeI	CTNAG	9 cut(s)	740, 839, 1055, 1436, 1597, 1716, 1913, 2054, 2094
DpnI	GATC	6 cut(s)	191, 699, 1017, 1450, 2138, 2156
DpnII	GATC	6 cut(s)	189, 697, 1015, 1448, 2136, 2154
Ecl136II	GAGCTC	1 cut(s)	778
Eco130I	CCWWGG	4 cut(s)	90, 516, 534, 1383
Eco147I	AGGCCT	2 cut(s)	89, 2283
Eco24I	GRGCYC	3 cut(s)	183, 672, 780
Eco31I	GGTCTC	1 cut(s)	506
Eco47I	GGWCC	6 cut(s)	562, 587, 921, 1257, 1814, 2069
Eco53kI	GAGCTC	1 cut(s)	778
Eco57I	CTGAAG	3 cut(s)	1068, 1656, 2213
Eco81I	CCTNAGG	2 cut(s)	1913, 2094
Eco88I	CYCGRG	1 cut(s)	2165
EcoICRI	GAGCTC	1 cut(s)	778
EcoNI	CCTNNNNNAGG	2 cut(s)	94, 533
EcoO109I	RGGNCCY	1 cut(s)	921
EcoRII	CCWGG	8 cut(s)	583, 1034, 1531, 1551, 2083, 2274, 2394, 2508
EcoT14I	CCWWGG	4 cut(s)	90, 516, 534, 1383
EcoT22I	ATGCAT	2 cut(s)	1480, 2251
EcoT38I	GRGCYC	3 cut(s)	183, 672, 780
ErhI	CCWWGG	4 cut(s)	90, 516, 534, 1383
Esp3I	CGTCTC	2 cut(s)	249, 2057
FaqI	GGGAC	3 cut(s)	934, 1243, 2155
FauI	CCCGC	2 cut(s)	626, 1676
FblI	GTMKAC	1 cut(s)	102
FokI	GGATG	9 cut(s)	447, 485, 589, 1060, 1259, 1298, 1811, 2196, 2357
FriOI	GRGCYC	3 cut(s)	183, 672, 780
FspBI	CTAG	7 cut(s)	123, 399, 497, 960, 1503, 1613, 2433
GlaI	GCGC	3 cut(s)	1572, 1964, 2000
GsaI	CCCAGC	4 cut(s)	460, 488, 759, 1167
GsuI	CTGGAG	3 cut(s)	1057, 1167, 2378
HaeIII	GGCC	6 cut(s)	89, 912, 1142, 2283, 2312, 2446
HapII	CCGG	2 cut(s)	590, 2255
HgaI	GACGC	3 cut(s)	844, 1103, 1766
HhaI	GCGC	3 cut(s)	1573, 1965, 2001
Hin6I	GCGC	3 cut(s)	1571, 1963, 1999
HinP1I	GCGC	3 cut(s)	1571, 1963, 1999
HincII	GTYRAC	3 cut(s)	556, 1234, 2485
HindII	GTYRAC	3 cut(s)	556, 1234, 2485
HpaI	GTTAAC	2 cut(s)	1234, 2485
HpaII	CCGG	2 cut(s)	590, 2255
HphI	GGTGA	2 cut(s)	1904, 2192
Hpy166II	GTNNAC	8 cut(s)	69, 103, 556, 1234, 1331, 2262, 2485, 2523
Hpy8I	GTNNAC	8 cut(s)	69, 103, 556, 1234, 1331, 2262, 2485, 2523
Hpy99I	CGWCG	2 cut(s)	1016, 1881
HpyAV	CCTTC	5 cut(s)	129, 229, 1945, 2055, 2090
HpyCH4III	ACNGT	6 cut(s)	259, 981, 1102, 1335, 1579, 1970
HpyF10VI	GCNNNNNNNGC	8 cut(s)	644, 1139, 1484, 1545, 1757, 1871, 1982, 2276
HpyF3I	CTNAG	9 cut(s)	740, 839, 1055, 1436, 1597, 1716, 1913, 2054, 2094
HspAI	GCGC	3 cut(s)	1571, 1963, 1999
KflI	GGGWCCC	1 cut(s)	921
Kpn2I	TCCGGA	1 cut(s)	589
KspAI	GTTAAC	2 cut(s)	1234, 2485
Kzo9I	GATC	6 cut(s)	189, 697, 1015, 1448, 2136, 2154
LmnI	GCTCC	8 cut(s)	805, 1001, 1038, 1441, 1765, 1862, 2063, 2397
MabI	ACCWGGT	1 cut(s)	1531
MaeI	CTAG	7 cut(s)	123, 399, 497, 960, 1503, 1613, 2433
MaeIII	GTNAC	5 cut(s)	824, 1059, 1115, 1288, 1904
MalI	GATC	6 cut(s)	191, 699, 1017, 1450, 2138, 2156
MboI	GATC	6 cut(s)	189, 697, 1015, 1448, 2136, 2154
MboII	GAAGA	8 cut(s)	225, 311, 485, 872, 891, 1649, 2251, 2504
MfeI	CAATTG	2 cut(s)	501, 771
MflI	RGATCY	2 cut(s)	2136, 2154
MhlI	GDGCHC	6 cut(s)	183, 672, 780, 1446, 1717, 1876
MluCI	AATT	8 cut(s)	501, 687, 747, 771, 1080, 1152, 1347, 1940
MlyI	GAGTC	4 cut(s)	243, 416, 2157, 2177
MmeI	TCCRAC	3 cut(s)	827, 1000, 2523
Mph1103I	ATGCAT	2 cut(s)	1480, 2251
MroI	TCCGGA	1 cut(s)	589
MroXI	GAANNNNTTC	1 cut(s)	350
MseI	TTAA	5 cut(s)	293, 1233, 1497, 1884, 2484
MslI	CAYNNNNRTG	2 cut(s)	257, 2214
MspA1I	CMGCKG	3 cut(s)	488, 1683, 2417
MspI	CCGG	2 cut(s)	590, 2255
MspR9I	CCNGG	8 cut(s)	585, 1036, 1533, 1553, 2085, 2276, 2396, 2510
MunI	CAATTG	2 cut(s)	501, 771
Mva1269I	GAATGC	1 cut(s)	116
MvaI	CCWGG	8 cut(s)	585, 1036, 1533, 1553, 2085, 2276, 2396, 2510
MvnI	CGCG	4 cut(s)	222, 683, 1965, 2001
MwoI	GCNNNNNNNGC	8 cut(s)	644, 1139, 1484, 1545, 1757, 1871, 1982, 2276
NdeII	GATC	6 cut(s)	189, 697, 1015, 1448, 2136, 2154
NheI	GCTAGC	1 cut(s)	1502
NlaIV	GGNNCC	9 cut(s)	203, 563, 922, 923, 997, 1259, 1708, 1864, 2138
NmeAIII	GCCGAG	1 cut(s)	973
NmuCI	GTSAC	4 cut(s)	824, 1059, 1115, 1288
NruI	TCGCGA	1 cut(s)	222
NsiI	ATGCAT	2 cut(s)	1480, 2251
NspI	RCATGY	4 cut(s)	790, 1494, 1963, 2293
OliI	CACNNNNGTG	1 cut(s)	257
PaeR7I	CTCGAG	1 cut(s)	2165
PagI	TCATGA	2 cut(s)	354, 417
PceI	AGGCCT	2 cut(s)	89, 2283
PcsI	WCGNNNNNNNCGW	2 cut(s)	721, 1020
PctI	GAATGC	1 cut(s)	116
PdmI	GAANNNNTTC	1 cut(s)	350
PflFI	GACNNNGTC	1 cut(s)	560
PflMI	CCANNNNNTGG	2 cut(s)	1361, 2509
PleI	GAGTC	4 cut(s)	243, 415, 2157, 2176
PpsI	GAGTC	4 cut(s)	243, 415, 2157, 2176
PpuMI	RGGWCCY	1 cut(s)	921
PshAI	GACNNNNGTC	1 cut(s)	2167
Psp124BI	GAGCTC	1 cut(s)	780
Psp5II	RGGWCCY	1 cut(s)	921
Psp6I	CCWGG	8 cut(s)	583, 1034, 1531, 1551, 2083, 2274, 2394, 2508
PspFI	CCCAGC	4 cut(s)	456, 484, 755, 1163
PspGI	CCWGG	8 cut(s)	583, 1034, 1531, 1551, 2083, 2274, 2394, 2508
PspN4I	GGNNCC	9 cut(s)	203, 563, 922, 923, 997, 1259, 1708, 1864, 2138
PspPI	GGNCC	8 cut(s)	562, 587, 911, 921, 1257, 1814, 2069, 2311
PspPPI	RGGWCCY	1 cut(s)	921
PspXI	VCTCGAGB	1 cut(s)	2165
PstI	CTGCAG	3 cut(s)	820, 1214, 1404
PsuI	RGATCY	2 cut(s)	2136, 2154
PsyI	GACNNNGTC	1 cut(s)	560
PvuII	CAGCTG	2 cut(s)	488, 2417
RruI	TCGCGA	1 cut(s)	222
RsaI	GTAC	2 cut(s)	68, 738
RsaNI	GTAC	2 cut(s)	67, 737
RseI	CAYNNNNRTG	2 cut(s)	257, 2214
SacI	GAGCTC	1 cut(s)	780
SaqAI	TTAA	5 cut(s)	293, 1233, 1497, 1884, 2484
Sau3AI	GATC	6 cut(s)	189, 697, 1015, 1448, 2136, 2154
Sau96I	GGNCC	8 cut(s)	562, 587, 911, 921, 1257, 1814, 2069, 2311
SchI	GAGTC	4 cut(s)	243, 416, 2157, 2177
ScrFI	CCNGG	8 cut(s)	585, 1036, 1533, 1553, 2085, 2276, 2396, 2510
SduI	GDGCHC	6 cut(s)	183, 672, 780, 1446, 1717, 1876
SexAI	ACCWGGT	1 cut(s)	1531
SfcI	CTRYAG	5 cut(s)	816, 1210, 1400, 1734, 2131
Sfr274I	CTCGAG	1 cut(s)	2165
SinI	GGWCC	6 cut(s)	562, 587, 921, 1257, 1814, 2069
SlaI	CTCGAG	1 cut(s)	2165
SmiMI	CAYNNNNRTG	2 cut(s)	257, 2214
SmlI	CTYRAG	3 cut(s)	665, 1134, 2165
SmoI	CTYRAG	3 cut(s)	665, 1134, 2165
Sse9I	AATT	8 cut(s)	501, 687, 747, 771, 1080, 1152, 1347, 1940
SseBI	AGGCCT	2 cut(s)	89, 2283
SsiI	CCGC	9 cut(s)	310, 506, 619, 651, 683, 1244, 1280, 1683, 2001
SspMI	CTAG	7 cut(s)	123, 399, 497, 960, 1503, 1613, 2433
SstI	GAGCTC	1 cut(s)	780
StuI	AGGCCT	2 cut(s)	89, 2283
StyD4I	CCNGG	8 cut(s)	583, 1034, 1531, 1551, 2083, 2274, 2394, 2508
StyI	CCWWGG	4 cut(s)	90, 516, 534, 1383
TaaI	ACNGT	6 cut(s)	259, 981, 1102, 1335, 1579, 1970
TaqI	TCGA	7 cut(s)	211, 247, 1014, 1023, 1879, 2161, 2166
TasI	AATT	8 cut(s)	501, 687, 747, 771, 1080, 1152, 1347, 1940
TatI	WGTACW	1 cut(s)	736
Tru1I	TTAA	5 cut(s)	293, 1233, 1497, 1884, 2484
Tru9I	TTAA	5 cut(s)	293, 1233, 1497, 1884, 2484
TscAI	CASTG	8 cut(s)	264, 634, 861, 1150, 1582, 1876, 1975, 2149
TseFI	GTSAC	4 cut(s)	824, 1059, 1115, 1288
Tsp45I	GTSAC	4 cut(s)	824, 1059, 1115, 1288
TspGWI	ACGGA	2 cut(s)	1827, 2371
TspRI	CASTG	8 cut(s)	264, 634, 861, 1150, 1582, 1876, 1975, 2149
Tth111I	GACNNNGTC	1 cut(s)	560
Van91I	CCANNNNNTGG	2 cut(s)	1361, 2509
VpaK11BI	GGWCC	6 cut(s)	562, 587, 921, 1257, 1814, 2069
XagI	CCTNNNNNAGG	2 cut(s)	94, 533
XapI	RAATTY	2 cut(s)	687, 1152
XceI	RCATGY	4 cut(s)	790, 1494, 1963, 2293
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2506
XhoI	CTCGAG	1 cut(s)	2165
XmiI	GTMKAC	1 cut(s)	102
XmnI	GAANNNNTTC	1 cut(s)	350
XspI	CTAG	7 cut(s)	123, 399, 497, 960, 1503, 1613, 2433
Zsp2I	ATGCAT	2 cut(s)	1480, 2251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.