AT1G30530

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
10814612 .. 10816615
2004 bp
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UTR
Exon/CDS
Intron
AT1G30530.1

Sequence Viewer

Length: 1362 bp
ATGACCAAATTCTCCGAGCCAATCAGAGACTCCCACGTGGCAGTTCTCGCGTTTTTCCCCGTTGGCGCTCATGCCGGTCCTCTCTTAGCCGTCACTCGCCGTCTCGCCGCCGCTTCTCCCTCCACCATCTTTTCTTTCTTCAACACCGCAAGATCAAACGCGTCGTTGTTCTCCTCTGATCATCCCGAGAACATCAAGGTCCACGACGTCTCTGACGGTGTTCCGGAGGGAACCATGCTCGGGAATCCACTGGAGATGGTCGAGCTGTTTCTCGAAGCGGCTCCACGTATTTTCCGGAGCGAAATCGCGGCGGCAGAGATAGAAGTTGGAAAGAAAGTGACATGCATGCTAACAGATGCCTTCTTCTGGTTCGCAGCGGACATAGCGGCTGAGCTGAACGCGACTTGGGTTGCCTTCTGGGCCGGCGGAGCAAACTCACTCTGTGCTCATCTCTACACTGATCTCATCAGAGAAACCATCGGTCTCAAAGATGTGAGTATGGAAGAGACATTAGGGTTTATACCAGGAATGGAGAATTACAGAGTTAAAGATATACCAGAGGAAGTTGTATTTGAAGATTTGGACTCTGTTTTCCCAAAGGCTTTATACCAAATGAGTCTTGCTTTACCTCGTGCCTCTGCTGTTTTCATCAGTTCCTTTGAAGAGTTAGAACCTACATTGAACTATAACCTAAGATCCAAACTTAAACGTTTCTTGAACATCGCCCCTCTCACGTTATTATCTTCTACATCGGAGAAAGAGATGCGTGATCCTCATGGCTGCTTTGCTTGGATGGGGAAGAGATCAGCTGCTTCTGTAGCGTACATTAGCTTCGGCACCGTCATGGAACCTCCTCCTGAAGAGCTTGTGGCGATAGCACAAGGGTTGGAATCAAGCAAAGTGCCGTTTGTTTGGTCGCTGAAGGAGAAGAACATGGTTCATCTACCAAAAGGGTTTTTGGATCGGACAAGAGAGCAAGGGATAGTGGTTCCTTGGGCTCCACAAGTGGAACTGCTGAAACACGAGGCAATGGGTGTGAATGTGACACATTGTGGATGGAACTCAGTGTTGGAGAGTGTGTCGGCAGGTGTACCGATGATCGGCAGACCGATTTTGGCGGATAATAGGCTCAACGGAAGAGCAGTGGAGGTTGTGTGGAAGGTTGGAGTGATGATGGATAATGGAGTCTTCACGAAAGAAGGATTTGAGAAGTGTTTGAATGATGTTTTTGTTCATGATGATGGTAAGACGATGAAGGCTAATGCCAAGAAGCTTAAAGAAAAACTCCAAGAAGATTTCTCCATGAAAGGAAGCTCTTTAGAGAATTTCAAAATATTGTTGGACGAAATTGTGAAAGTTTAG

Protein Analysis

453

Amino Acids

50.09

Weight (kDa)

5.44

Isoelectric Point (pI)

34.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 60 - 426 1.7e-31 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0009969)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1076
AatII GACGTC 1 cut(s) 210
Acc36I ACCTGC 1 cut(s) 1076
AccB1I GGYRCC 1 cut(s) 836
AccII CGCG 4 cut(s) 50, 161, 308, 401
AccIII TCCGGA 2 cut(s) 223, 294
AclI AACGTT 1 cut(s) 709
AclWI GGATC 3 cut(s) 690, 764, 969
AcsI RAATTY 2 cut(s) 8, 1324
AcuI CTGAAG 2 cut(s) 879, 941
AcvI CACGTG 1 cut(s) 37
AcyI GRCGYC 1 cut(s) 207
AdeI CACNNNGTG 2 cut(s) 443, 1052
AfaI GTAC 2 cut(s) 824, 1092
AfiI CCNNNNNNNGG 3 cut(s) 240, 366, 1100
AflIII ACRYGT 1 cut(s) 159
AgsI TTSAA 7 cut(s) 142, 575, 662, 682, 718, 1219, 1330
AjnI CCWGG 1 cut(s) 523
AjuI GAANNNNNNNTTGG 2 cut(s) 1052, 1084
AluBI AGCT 7 cut(s) 265, 394, 809, 831, 865, 1273, 1314
AluI AGCT 7 cut(s) 265, 394, 809, 831, 865, 1273, 1314
Alw21I GWGCWC 1 cut(s) 448
Alw26I GTCTC 5 cut(s) 21, 107, 214, 488, 500
AlwI GGATC 3 cut(s) 690, 764, 969
Ama87I CYCGRG 2 cut(s) 185, 239
Aor13HI TCCGGA 2 cut(s) 223, 294
AoxI GGCC 1 cut(s) 420
ApeKI GCWGC 3 cut(s) 374, 780, 809
ApoI RAATTY 2 cut(s) 8, 1324
AspLEI GCGC 1 cut(s) 68
AspS9I GGNCC 3 cut(s) 77, 199, 420
AvaI CYCGRG 2 cut(s) 185, 239
AvaII GGWCC 2 cut(s) 77, 199
BanI GGYRCC 1 cut(s) 836
BanII GRGCYC 1 cut(s) 1000
BarI GAAGNNNNNNTAC 2 cut(s) 815, 847
BauI CACGAG 2 cut(s) 630, 1022
BbrPI CACGTG 1 cut(s) 37
BbsI GAAGAC 1 cut(s) 1180
Bbv12I GWGCWC 1 cut(s) 448
BbvI GCAGC 3 cut(s) 386, 767, 796
BccI CCATC 7 cut(s) 134, 250, 485, 787, 1050, 1168, 1235
BceAI ACGGC 3 cut(s) 74, 84, 889
BciT130I CCWGG 1 cut(s) 525
BclI TGATCA 1 cut(s) 178
BcoDI GTCTC 5 cut(s) 21, 107, 214, 488, 500
BfmI CTRYAG 1 cut(s) 816
BfoI RGCGCY 1 cut(s) 69
BfuAI ACCTGC 1 cut(s) 1076
BglI GCCNNNNNGGC 1 cut(s) 419
BisI GCNGC 9 cut(s) 108, 111, 279, 309, 312, 375, 387, 781, 810
BlpI GCTNAGC 1 cut(s) 390
BlsI GCNGC 9 cut(s) 109, 112, 280, 310, 313, 376, 388, 782, 811
Bme1390I CCNGG 1 cut(s) 525
Bme18I GGWCC 2 cut(s) 77, 199
BmeT110I CYCGRG 2 cut(s) 185, 239
BmgT120I GGNCC 3 cut(s) 77, 199, 420
BmiI GGNNCC 6 cut(s) 232, 282, 838, 849, 990, 999
BmrFI CCNGG 1 cut(s) 525
BmsI GCATC 2 cut(s) 346, 753
BpiI GAAGAC 1 cut(s) 1180
BpmI CTGGAG 1 cut(s) 272
Bpu1102I GCTNAGC 1 cut(s) 390
BsaAI YACGTR 2 cut(s) 37, 287
BsaHI GRCGYC 1 cut(s) 207
BsaI GGTCTC 1 cut(s) 488
BsaJI CCNNGG 1 cut(s) 992
BsaWI WCCGGW 2 cut(s) 223, 294
BsaXI ACNNNNNCTCC 4 cut(s) 1064, 1094, 1139, 1169
Bsc4I CCNNNNNNNGG 3 cut(s) 240, 366, 1100
Bse118I RCCGGY 2 cut(s) 74, 422
Bse1I ACTGG 1 cut(s) 255
Bse3DI GCAATG 1 cut(s) 1035
BseAI TCCGGA 2 cut(s) 223, 294
BseBI CCWGG 1 cut(s) 525
BseDI CCNNGG 1 cut(s) 992
BseGI GGATG 3 cut(s) 181, 798, 1061
BseLI CCNNNNNNNGG 3 cut(s) 240, 366, 1100
BseMI GCAATG 1 cut(s) 1035
BseMII CTCAG 2 cut(s) 381, 1077
BseNI ACTGG 1 cut(s) 255
BseRI GAGGAG 2 cut(s) 163, 843
BseXI GCAGC 3 cut(s) 386, 767, 796
Bsh1236I CGCG 4 cut(s) 50, 161, 308, 401
BshFI GGCC 1 cut(s) 422
BshNI GGYRCC 1 cut(s) 836
BsiHKAI GWGCWC 1 cut(s) 448
BsiHKCI CYCGRG 2 cut(s) 185, 239
BsiSI CCGG 4 cut(s) 75, 224, 295, 423
BslI CCNNNNNNNGG 3 cut(s) 240, 366, 1100
BsmAI GTCTC 5 cut(s) 21, 107, 214, 488, 500
BsmBI CGTCTC 2 cut(s) 107, 214
BsnI GGCC 1 cut(s) 422
Bso31I GGTCTC 1 cut(s) 488
BsoBI CYCGRG 2 cut(s) 185, 239
Bsp1286I GDGCHC 2 cut(s) 448, 1000
Bsp13I TCCGGA 2 cut(s) 223, 294
Bsp143I GATC 8 cut(s) 152, 178, 460, 695, 769, 803, 961, 1098
Bsp1720I GCTNAGC 1 cut(s) 390
BspANI GGCC 1 cut(s) 422
BspCNI CTCAG 2 cut(s) 382, 1076
BspEI TCCGGA 2 cut(s) 223, 294
BspFNI CGCG 4 cut(s) 50, 161, 308, 401
BspHI TCATGA 1 cut(s) 1234
BspLI GGNNCC 6 cut(s) 232, 282, 838, 849, 990, 999
BspMI ACCTGC 1 cut(s) 1076
BspPI GGATC 3 cut(s) 690, 764, 969
BspQI GCTCTTC 2 cut(s) 855, 1132
BspT107I GGYRCC 1 cut(s) 836
BspTNI GGTCTC 1 cut(s) 488
BsrDI GCAATG 1 cut(s) 1035
BsrFI RCCGGY 2 cut(s) 74, 422
BsrI ACTGG 1 cut(s) 255
BssAI RCCGGY 2 cut(s) 74, 422
BssECI CCNNGG 1 cut(s) 992
BssMI GATC 8 cut(s) 152, 178, 460, 695, 769, 803, 961, 1098
BssNI GRCGYC 1 cut(s) 207
BssSI CACGAG 2 cut(s) 630, 1022
BssT1I CCWWGG 1 cut(s) 992
Bst2BI CACGAG 2 cut(s) 630, 1022
Bst2UI CCWGG 1 cut(s) 525
Bst4CI ACNGT 2 cut(s) 218, 841
Bst6I CTCTTC 5 cut(s) 498, 657, 794, 855, 1132
BstACI GRCGYC 1 cut(s) 207
BstBAI YACGTR 2 cut(s) 37, 287
BstC8I GCNNGC 2 cut(s) 347, 424
BstDEI CTNAG 4 cut(s) 85, 390, 692, 1063
BstF5I GGATG 3 cut(s) 181, 798, 1061
BstFNI CGCG 4 cut(s) 50, 161, 308, 401
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 1 cut(s) 68
BstKTI GATC 8 cut(s) 155, 181, 463, 698, 772, 806, 964, 1101
BstMAI GTCTC 5 cut(s) 21, 107, 214, 488, 500
BstMBI GATC 8 cut(s) 152, 178, 460, 695, 769, 803, 961, 1098
BstMWI GCNNNNNNNGC 5 cut(s) 47, 383, 419, 428, 818
BstNI CCWGG 1 cut(s) 525
BstNSI RCATGY 2 cut(s) 345, 349
BstSCI CCNGG 1 cut(s) 523
BstSFI CTRYAG 1 cut(s) 816
BstUI CGCG 4 cut(s) 50, 161, 308, 401
BstV1I GCAGC 3 cut(s) 386, 767, 796
BstV2I GAAGAC 1 cut(s) 1180
BstX2I RGATCY 1 cut(s) 695
BstYI RGATCY 1 cut(s) 695
BsuRI GGCC 1 cut(s) 422
BtgZI GCGATG 1 cut(s) 706
BtsCI GGATG 3 cut(s) 181, 798, 1061
BtsI GCAGTG 1 cut(s) 1149
BtsIMutI CAGTG 4 cut(s) 248, 456, 1071, 1149
BveI ACCTGC 1 cut(s) 1076
Cac8I GCNNGC 2 cut(s) 347, 424
CciI TCATGA 1 cut(s) 1234
CfoI GCGC 1 cut(s) 68
Cfr10I RCCGGY 2 cut(s) 74, 422
Cfr13I GGNCC 3 cut(s) 77, 199, 420
CseI GACGC 1 cut(s) 150
Csp6I GTAC 2 cut(s) 823, 1091
CviAII CATG 9 cut(s) 71, 235, 342, 346, 776, 844, 934, 1235, 1303
CviQI GTAC 2 cut(s) 823, 1091
DdeI CTNAG 4 cut(s) 85, 390, 692, 1063
DpnI GATC 8 cut(s) 154, 180, 462, 697, 771, 805, 963, 1100
DpnII GATC 8 cut(s) 152, 178, 460, 695, 769, 803, 961, 1098
DraIII CACNNNGTG 2 cut(s) 443, 1052
Eam1104I CTCTTC 5 cut(s) 498, 657, 794, 855, 1132
EarI CTCTTC 5 cut(s) 498, 657, 794, 855, 1132
EciI GGCGGA 2 cut(s) 441, 1133
Eco130I CCWWGG 1 cut(s) 992
Eco24I GRGCYC 1 cut(s) 1000
Eco31I GGTCTC 1 cut(s) 488
Eco47I GGWCC 2 cut(s) 77, 199
Eco57I CTGAAG 2 cut(s) 879, 941
Eco72I CACGTG 1 cut(s) 37
Eco88I CYCGRG 2 cut(s) 185, 239
EcoRII CCWGG 1 cut(s) 523
EcoT14I CCWWGG 1 cut(s) 992
EcoT22I ATGCAT 1 cut(s) 347
EcoT38I GRGCYC 1 cut(s) 1000
ErhI CCWWGG 1 cut(s) 992
Esp3I CGTCTC 2 cut(s) 107, 214
FaeI CATG 9 cut(s) 74, 238, 345, 349, 779, 847, 937, 1238, 1306
FatI CATG 9 cut(s) 70, 234, 341, 345, 775, 843, 933, 1234, 1302
FbaI TGATCA 1 cut(s) 178
Fnu4HI GCNGC 9 cut(s) 108, 111, 279, 309, 312, 375, 387, 781, 810
FokI GGATG 3 cut(s) 168, 805, 1068
FriOI GRGCYC 1 cut(s) 1000
Fsp4HI GCNGC 9 cut(s) 108, 111, 279, 309, 312, 375, 387, 781, 810
GlaI GCGC 1 cut(s) 67
GluI GCNGC 9 cut(s) 108, 111, 279, 309, 312, 375, 387, 781, 810
GsuI CTGGAG 1 cut(s) 272
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 1 cut(s) 422
HapII CCGG 4 cut(s) 75, 224, 295, 423
HgaI GACGC 1 cut(s) 150
HhaI GCGC 1 cut(s) 68
Hin1I GRCGYC 1 cut(s) 207
Hin1II CATG 9 cut(s) 74, 238, 345, 349, 779, 847, 937, 1238, 1306
Hin6I GCGC 1 cut(s) 66
HinP1I GCGC 1 cut(s) 66
HindIII AAGCTT 1 cut(s) 1271
HinfI GANTC 6 cut(s) 29, 244, 584, 616, 890, 1185
HpaII CCGG 4 cut(s) 75, 224, 295, 423
Hpy166II GTNNAC 2 cut(s) 202, 1091
Hpy188I TCNGA 7 cut(s) 16, 26, 178, 214, 470, 754, 966
Hpy188III TCNNGA 9 cut(s) 185, 224, 241, 272, 295, 715, 857, 1192, 1235
Hpy8I GTNNAC 2 cut(s) 202, 1091
Hpy99I CGWCG 2 cut(s) 166, 209
HpyAV CCTTC 6 cut(s) 370, 424, 916, 1153, 1193, 1249
HpyCH4III ACNGT 2 cut(s) 218, 841
HpyCH4IV ACGT 5 cut(s) 36, 207, 286, 709, 734
HpyCH4V TGCA 1 cut(s) 345
HpyF10VI GCNNNNNNNGC 5 cut(s) 47, 383, 419, 428, 818
HpyF3I CTNAG 4 cut(s) 85, 390, 692, 1063
HpySE526I ACGT 5 cut(s) 36, 207, 286, 709, 734
Hsp92I GRCGYC 1 cut(s) 207
Hsp92II CATG 9 cut(s) 74, 238, 345, 349, 779, 847, 937, 1238, 1306
HspAI GCGC 1 cut(s) 66
Kpn2I TCCGGA 2 cut(s) 223, 294
KroI GCCGGC 1 cut(s) 422
KroNI GCCGGC 1 cut(s) 424
Ksp22I TGATCA 1 cut(s) 178
Kzo9I GATC 8 cut(s) 152, 178, 460, 695, 769, 803, 961, 1098
LguI GCTCTTC 2 cut(s) 855, 1132
LmnI GCTCC 4 cut(s) 286, 297, 428, 1003
Lsp1109I GCAGC 3 cut(s) 386, 767, 796
LweI GCATC 2 cut(s) 346, 753
MaeII ACGT 5 cut(s) 36, 207, 286, 709, 734
MaeIII GTNAC 3 cut(s) 91, 337, 1042
MalI GATC 8 cut(s) 154, 180, 462, 697, 771, 805, 963, 1100
MboI GATC 8 cut(s) 152, 178, 460, 695, 769, 803, 961, 1098
MflI RGATCY 1 cut(s) 695
MhlI GDGCHC 2 cut(s) 448, 1000
MluCI AATT 4 cut(s) 8, 535, 1324, 1347
MluI ACGCGT 1 cut(s) 159
MlyI GAGTC 4 cut(s) 23, 578, 625, 1194
MmeI TCCRAC 5 cut(s) 307, 867, 1050, 1144, 1320
Mph1103I ATGCAT 1 cut(s) 347
MroI TCCGGA 2 cut(s) 223, 294
MroNI GCCGGC 1 cut(s) 422
MseI TTAA 3 cut(s) 546, 705, 1275
MslI CAYNNNNRTG 2 cut(s) 842, 1239
MspA1I CMGCKG 2 cut(s) 377, 809
MspI CCGG 4 cut(s) 75, 224, 295, 423
MspR9I CCNGG 1 cut(s) 525
MvaI CCWGG 1 cut(s) 525
MvnI CGCG 4 cut(s) 50, 161, 308, 401
MwoI GCNNNNNNNGC 5 cut(s) 47, 383, 419, 428, 818
NaeI GCCGGC 1 cut(s) 424
NdeII GATC 8 cut(s) 152, 178, 460, 695, 769, 803, 961, 1098
NgoMIV GCCGGC 1 cut(s) 422
NlaIII CATG 9 cut(s) 74, 238, 345, 349, 779, 847, 937, 1238, 1306
NlaIV GGNNCC 6 cut(s) 232, 282, 838, 849, 990, 999
NmuCI GTSAC 3 cut(s) 91, 337, 1042
NsiI ATGCAT 1 cut(s) 347
NspI RCATGY 2 cut(s) 345, 349
PaeI GCATGC 1 cut(s) 349
PagI TCATGA 1 cut(s) 1234
PaqCI CACCTGC 1 cut(s) 1076
PciSI GCTCTTC 2 cut(s) 855, 1132
PdiI GCCGGC 1 cut(s) 424
PfeI GAWTC 2 cut(s) 244, 890
PkrI GCNGC 9 cut(s) 109, 112, 280, 310, 313, 376, 388, 782, 811
PleI GAGTC 4 cut(s) 23, 578, 624, 1193
PmaCI CACGTG 1 cut(s) 37
PmlI CACGTG 1 cut(s) 37
PpsI GAGTC 4 cut(s) 23, 578, 624, 1193
Ppu21I YACGTR 2 cut(s) 37, 287
Psp1406I AACGTT 1 cut(s) 709
Psp6I CCWGG 1 cut(s) 523
PspCI CACGTG 1 cut(s) 37
PspGI CCWGG 1 cut(s) 523
PspN4I GGNNCC 6 cut(s) 232, 282, 838, 849, 990, 999
PspPI GGNCC 3 cut(s) 77, 199, 420
PsuI RGATCY 1 cut(s) 695
PvuII CAGCTG 1 cut(s) 809
RsaI GTAC 2 cut(s) 824, 1092
RsaNI GTAC 2 cut(s) 823, 1091
RseI CAYNNNNRTG 2 cut(s) 842, 1239
SapI GCTCTTC 2 cut(s) 855, 1132
SaqAI TTAA 3 cut(s) 546, 705, 1275
SatI GCNGC 9 cut(s) 108, 111, 279, 309, 312, 375, 387, 781, 810
Sau3AI GATC 8 cut(s) 152, 178, 460, 695, 769, 803, 961, 1098
Sau96I GGNCC 3 cut(s) 77, 199, 420
SchI GAGTC 4 cut(s) 23, 578, 625, 1194
ScrFI CCNGG 1 cut(s) 525
SduI GDGCHC 2 cut(s) 448, 1000
SfaNI GCATC 2 cut(s) 346, 753
SfcI CTRYAG 1 cut(s) 816
SinI GGWCC 2 cut(s) 77, 199
SmiMI CAYNNNNRTG 2 cut(s) 842, 1239
SphI GCATGC 1 cut(s) 349
Sse9I AATT 4 cut(s) 8, 535, 1324, 1347
SspI AATATT 1 cut(s) 1335
StyD4I CCNGG 1 cut(s) 523
StyI CCWWGG 1 cut(s) 992
TaaI ACNGT 2 cut(s) 218, 841
TaiI ACGT 5 cut(s) 39, 210, 289, 712, 737
TaqI TCGA 2 cut(s) 261, 273
TaqII GACCGA 2 cut(s) 470, 1123
TasI AATT 4 cut(s) 8, 535, 1324, 1347
TauI GCSGC 6 cut(s) 110, 113, 281, 311, 314, 389
TfiI GAWTC 2 cut(s) 244, 890
Tru1I TTAA 3 cut(s) 546, 705, 1275
Tru9I TTAA 3 cut(s) 546, 705, 1275
TscAI CASTG 4 cut(s) 255, 463, 1071, 1149
TseFI GTSAC 3 cut(s) 91, 337, 1042
TseI GCWGC 3 cut(s) 374, 780, 809
Tsp45I GTSAC 3 cut(s) 91, 337, 1042
TspDTI ATGAA 5 cut(s) 637, 929, 1223, 1268, 1319
TspGWI ACGGA 1 cut(s) 1149
TspRI CASTG 4 cut(s) 255, 463, 1071, 1149
VpaK11BI GGWCC 2 cut(s) 77, 199
XapI RAATTY 2 cut(s) 8, 1324
XceI RCATGY 2 cut(s) 345, 349
ZraI GACGTC 1 cut(s) 208
Zsp2I ATGCAT 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.