AT5G17050

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
5607788 .. 5609589
1802 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G17050.1

Sequence Viewer

Length: 1383 bp
ATGACCAAACCCTCCGACCCAACCAGAGACTCCCACGTGGCAGTTCTCGCTTTTCCTTTCGGCACTCATGCAGCTCCTCTCCTCACCGTCACGCGCCGCCTCGCCTCCGCCTCTCCTTCCACCGTCTTCTCTTTCTTCAACACCGCACAATCCAACTCTTCGTTATTTTCCTCCGGTGACGAAGCAGATCGTCCGGCGAACATCAGAGTATACGATATTGCCGACGGTGTTCCGGAGGGATACGTGTTTAGCGGGAGACCACAGGAGGCGATCGAGCTGTTTCTTCAAGCTGCGCCGGAGAATTTCCGGAGAGAAATCGCGAAGGCGGAGACGGAGGTTGGTACGGAAGTGAAATGTTTGATGACTGATGCGTTCTTCTGGTTCGCGGCTGATATGGCGACGGAGATAAATGCGTCGTGGATTGCGTTTTGGACCGCCGGAGCAAACTCACTCTCTGCTCATCTCTACACAGATCTCATCAGAGAAACCATCGGTGTCAAAGAAGTAGGTGAGCGTATGGAGGAGACAATAGGGGTTATCTCAGGAATGGAGAAGATCAGAGTCAAAGATACACCAGAAGGAGTTGTGTTTGGGAATTTAGACTCTGTTTTCTCAAAGATGCTTCATCAAATGGGTCTTGCTTTGCCTCGTGCCACTGCTGTTTTCATCAATTCTTTTGAAGATTTGGATCCTACATTGACGAATAACCTCAGATCGAGATTTAAACGATATCTGAACATCGGTCCTCTCGGGTTATTATCTTCTACATTGCAACAACTAGTGCAAGATCCTCACGGTTGTTTGGCTTGGATGGAGAAGAGATCTTCTGGTTCTGTGGCGTACATTAGCTTTGGTACGGTCATGACACCGCCTCCTGGAGAGCTTGCGGCGATAGCAGAAGGGTTGGAATCGAGTAAAGTGCCGTTTGTTTGGTCGCTTAAGGAGAAGAGCTTGGTTCAGTTACCAAAAGGGTTTTTGGATAGGACAAGAGAGCAAGGGATAGTGGTTCCATGGGCACCGCAAGTGGAACTGCTGAAACACGAAGCAACGGGTGTGTTTGTGACGCATTGTGGATGGAACTCGGTGTTGGAGAGTGTATCGGGTGGTGTACCGATGATTTGCAGGCCATTTTTTGGGGATCAGAGATTGAACGGAAGAGCGGTGGAGGTTGTGTGGGAGATTGGAATGACGATTATCAATGGAGTCTTCACGAAAGATGGGTTTGAGAAGTGTTTGGATAAAGTTTTAGTTCAAGATGATGGTAAGAAGATGAAATGTAATGCTAAGAAACTTAAAGAACTAGCTTACGAAGCTGTCTCTTCTAAAGGAAGGTCCTCTGAGAATTTCAGAGGATTGTTGGATGCAGTTGTAAACATTATTTGA

Protein Analysis

460

Amino Acids

50.49

Weight (kDa)

5.67

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 114 - 431 3.8e-36 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0009969)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1015
AccB7I CCANNNNNTGG 1 cut(s) 1133
AccBSI CCGCTC 1 cut(s) 1160
AccI GTMKAC 1 cut(s) 210
AccII CGCG 3 cut(s) 94, 320, 386
AccIII TCCGGA 2 cut(s) 232, 306
AclWI GGATC 4 cut(s) 683, 696, 782, 1146
AcsI RAATTY 3 cut(s) 301, 595, 1342
AcvI CACGTG 1 cut(s) 37
AfaI GTAC 4 cut(s) 343, 842, 856, 1110
AfiI CCNNNNNNNGG 2 cut(s) 875, 1133
AflII CTTAAG 1 cut(s) 938
AflIII ACRYGT 1 cut(s) 243
AgsI TTSAA 5 cut(s) 139, 287, 680, 1150, 1253
AhlI ACTAGT 1 cut(s) 778
AjnI CCWGG 1 cut(s) 874
AjuI GAANNNNNNNTTGG 2 cut(s) 1070, 1102
AluBI AGCT 8 cut(s) 74, 277, 290, 849, 883, 951, 1304, 1313
AluI AGCT 8 cut(s) 74, 277, 290, 849, 883, 951, 1304, 1313
Alw26I GTCTC 5 cut(s) 21, 250, 323, 518, 1321
AlwI GGATC 4 cut(s) 683, 696, 782, 1146
Ama87I CYCGRG 1 cut(s) 749
Aor13HI TCCGGA 2 cut(s) 232, 306
AoxI GGCC 1 cut(s) 1124
ApeKI GCWGC 2 cut(s) 71, 290
ApoI RAATTY 3 cut(s) 301, 595, 1342
AspLEI GCGC 2 cut(s) 96, 295
AspS9I GGNCC 3 cut(s) 432, 743, 1332
AsuHPI GGTGA 3 cut(s) 76, 188, 521
AvaI CYCGRG 1 cut(s) 749
AvaII GGWCC 3 cut(s) 432, 743, 1332
BaeGI GKGCMC 1 cut(s) 1018
BaeI ACNNNNGTAYC 2 cut(s) 333, 366
BamHI GGATCC 1 cut(s) 688
BanI GGYRCC 1 cut(s) 1015
BauI CACGAG 1 cut(s) 648
BbrPI CACGTG 1 cut(s) 37
BbsI GAAGAC 2 cut(s) 118, 1198
BbvI GCAGC 2 cut(s) 83, 277
BccI CCATC 5 cut(s) 497, 805, 1068, 1211, 1253
BceAI ACGGC 1 cut(s) 907
BcgI CGANNNNNNTGC 2 cut(s) 901, 935
BciT130I CCWGG 1 cut(s) 876
BciVI GTATCC 1 cut(s) 233
BcoDI GTCTC 5 cut(s) 21, 250, 323, 518, 1321
BcuI ACTAGT 1 cut(s) 778
BfaI CTAG 2 cut(s) 779, 1301
BfrI CTTAAG 1 cut(s) 938
BfuI GTATCC 1 cut(s) 233
BglII AGATCT 2 cut(s) 472, 821
BisI GCNGC 5 cut(s) 72, 97, 291, 387, 888
BlsI GCNGC 5 cut(s) 73, 98, 292, 388, 889
Bme1390I CCNGG 1 cut(s) 876
Bme18I GGWCC 3 cut(s) 432, 743, 1332
BmeT110I CYCGRG 1 cut(s) 749
BmgT120I GGNCC 3 cut(s) 432, 743, 1332
BmiI GGNNCC 3 cut(s) 690, 1008, 1017
BmrFI CCNGG 1 cut(s) 876
BmsI GCATC 3 cut(s) 358, 609, 1351
BpiI GAAGAC 2 cut(s) 118, 1198
BpmI CTGGAG 1 cut(s) 897
BsaAI YACGTR 2 cut(s) 37, 244
BsaBI GATNNNNATC 1 cut(s) 687
BsaI GGTCTC 1 cut(s) 250
BsaJI CCNNGG 1 cut(s) 1010
BsaWI WCCGGW 3 cut(s) 173, 232, 306
BsaXI ACNNNNNCTCC 4 cut(s) 856, 886, 1157, 1187
Bsc4I CCNNNNNNNGG 2 cut(s) 875, 1133
Bse3DI GCAATG 1 cut(s) 767
Bse8I GATNNNNATC 1 cut(s) 687
BseAI TCCGGA 2 cut(s) 232, 306
BseBI CCWGG 1 cut(s) 876
BseDI CCNNGG 1 cut(s) 1010
BseGI GGATG 3 cut(s) 816, 1079, 1366
BseJI GATNNNNATC 1 cut(s) 687
BseLI CCNNNNNNNGG 2 cut(s) 875, 1133
BseMI GCAATG 1 cut(s) 767
BseMII CTCAG 3 cut(s) 555, 724, 1329
BseRI GAGGAG 3 cut(s) 66, 71, 536
BseSI GKGCMC 1 cut(s) 1018
BseXI GCAGC 2 cut(s) 83, 277
Bsh1236I CGCG 3 cut(s) 94, 320, 386
Bsh1285I CGRYCG 1 cut(s) 273
BshFI GGCC 1 cut(s) 1126
BshNI GGYRCC 1 cut(s) 1015
BsiEI CGRYCG 1 cut(s) 273
BsiHKCI CYCGRG 1 cut(s) 749
BsiSI CCGG 6 cut(s) 174, 194, 233, 296, 307, 438
BslI CCNNNNNNNGG 2 cut(s) 875, 1133
BsmAI GTCTC 5 cut(s) 21, 250, 323, 518, 1321
BsmBI CGTCTC 1 cut(s) 323
BsnI GGCC 1 cut(s) 1126
Bso31I GGTCTC 1 cut(s) 250
BsoBI CYCGRG 1 cut(s) 749
Bsp1286I GDGCHC 1 cut(s) 1018
Bsp13I TCCGGA 2 cut(s) 232, 306
Bsp143I GATC 9 cut(s) 187, 270, 472, 555, 688, 713, 787, 821, 1138
Bsp19I CCATGG 1 cut(s) 1010
Bsp68I TCGCGA 1 cut(s) 320
BspANI GGCC 1 cut(s) 1126
BspCNI CTCAG 3 cut(s) 554, 723, 1330
BspEI TCCGGA 2 cut(s) 232, 306
BspFNI CGCG 3 cut(s) 94, 320, 386
BspHI TCATGA 1 cut(s) 861
BspLI GGNNCC 3 cut(s) 690, 1008, 1017
BspPI GGATC 4 cut(s) 683, 696, 782, 1146
BspQI GCTCTTC 2 cut(s) 941, 1150
BspT107I GGYRCC 1 cut(s) 1015
BspTI CTTAAG 1 cut(s) 938
BspTNI GGTCTC 1 cut(s) 250
BsrBI CCGCTC 1 cut(s) 1160
BsrDI GCAATG 1 cut(s) 767
BssECI CCNNGG 1 cut(s) 1010
BssMI GATC 9 cut(s) 187, 270, 472, 555, 688, 713, 787, 821, 1138
BssNAI GTATAC 1 cut(s) 211
BssSI CACGAG 1 cut(s) 648
BssT1I CCWWGG 1 cut(s) 1010
Bst1107I GTATAC 1 cut(s) 211
Bst2BI CACGAG 1 cut(s) 648
Bst2UI CCWGG 1 cut(s) 876
Bst4CI ACNGT 5 cut(s) 88, 124, 227, 797, 859
Bst6I CTCTTC 5 cut(s) 163, 812, 941, 1150, 1324
BstAFI CTTAAG 1 cut(s) 938
BstBAI YACGTR 2 cut(s) 37, 244
BstC8I GCNNGC 2 cut(s) 885, 1124
BstDEI CTNAG 4 cut(s) 541, 710, 1284, 1338
BstDSI CCRYGG 1 cut(s) 1010
BstF5I GGATG 3 cut(s) 816, 1079, 1366
BstFNI CGCG 3 cut(s) 94, 320, 386
BstHHI GCGC 2 cut(s) 96, 295
BstKTI GATC 9 cut(s) 190, 273, 475, 558, 691, 716, 790, 824, 1141
BstMAI GTCTC 5 cut(s) 21, 250, 323, 518, 1321
BstMBI GATC 9 cut(s) 187, 270, 472, 555, 688, 713, 787, 821, 1138
BstMCI CGRYCG 1 cut(s) 273
BstMWI GCNNNNNNNGC 4 cut(s) 47, 395, 893, 1310
BstNI CCWGG 1 cut(s) 876
BstSCI CCNGG 1 cut(s) 874
BstSLI GKGCMC 1 cut(s) 1018
BstUI CGCG 3 cut(s) 94, 320, 386
BstV1I GCAGC 2 cut(s) 83, 277
BstV2I GAAGAC 2 cut(s) 118, 1198
BstX2I RGATCY 4 cut(s) 472, 688, 787, 821
BstYI RGATCY 4 cut(s) 472, 688, 787, 821
BstZ17I GTATAC 1 cut(s) 211
BsuI GTATCC 1 cut(s) 233
BsuRI GGCC 1 cut(s) 1126
BtgI CCRYGG 1 cut(s) 1010
BtsCI GGATG 3 cut(s) 816, 1079, 1366
BtsI GCAGTG 1 cut(s) 654
BtsIMutI CAGTG 1 cut(s) 654
BtuMI TCGCGA 1 cut(s) 320
Cac8I GCNNGC 2 cut(s) 885, 1124
CciI TCATGA 1 cut(s) 861
CfoI GCGC 2 cut(s) 96, 295
Cfr13I GGNCC 3 cut(s) 432, 743, 1332
CseI GACGC 2 cut(s) 402, 1072
Csp6I GTAC 4 cut(s) 342, 841, 855, 1109
CviAII CATG 3 cut(s) 68, 862, 1011
CviQI GTAC 4 cut(s) 342, 841, 855, 1109
DdeI CTNAG 4 cut(s) 541, 710, 1284, 1338
DpnI GATC 9 cut(s) 189, 272, 474, 557, 690, 715, 789, 823, 1140
DpnII GATC 9 cut(s) 187, 270, 472, 555, 688, 713, 787, 821, 1138
DraI TTTAAA 1 cut(s) 724
Eam1104I CTCTTC 5 cut(s) 163, 812, 941, 1150, 1324
EarI CTCTTC 5 cut(s) 163, 812, 941, 1150, 1324
EciI GGCGGA 2 cut(s) 97, 341
Eco130I CCWWGG 1 cut(s) 1010
Eco31I GGTCTC 1 cut(s) 250
Eco32I GATATC 1 cut(s) 731
Eco47I GGWCC 3 cut(s) 432, 743, 1332
Eco72I CACGTG 1 cut(s) 37
Eco88I CYCGRG 1 cut(s) 749
EcoO109I RGGNCCY 1 cut(s) 1332
EcoRII CCWGG 1 cut(s) 874
EcoRV GATATC 1 cut(s) 731
EcoT14I CCWWGG 1 cut(s) 1010
ErhI CCWWGG 1 cut(s) 1010
Esp3I CGTCTC 1 cut(s) 323
FaeI CATG 3 cut(s) 71, 865, 1014
FaiI YATR 6 cut(s) 69, 211, 395, 518, 863, 1012
FatI CATG 3 cut(s) 67, 861, 1010
FauI CCCGC 1 cut(s) 245
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 5 cut(s) 72, 97, 291, 387, 888
FokI GGATG 3 cut(s) 823, 1086, 1373
Fsp4HI GCNGC 5 cut(s) 72, 97, 291, 387, 888
FspBI CTAG 2 cut(s) 779, 1301
GlaI GCGC 2 cut(s) 95, 294
GluI GCNGC 5 cut(s) 72, 97, 291, 387, 888
GsuI CTGGAG 1 cut(s) 897
HaeIII GGCC 1 cut(s) 1126
HapII CCGG 6 cut(s) 174, 194, 233, 296, 307, 438
HgaI GACGC 2 cut(s) 402, 1072
HhaI GCGC 2 cut(s) 96, 295
Hin1II CATG 3 cut(s) 71, 865, 1014
Hin6I GCGC 2 cut(s) 94, 293
HinP1I GCGC 2 cut(s) 94, 293
HinfI GANTC 5 cut(s) 29, 561, 602, 908, 1203
HpaII CCGG 6 cut(s) 174, 194, 233, 296, 307, 438
HphI GGTGA 3 cut(s) 76, 188, 521
Hpy166II GTNNAC 3 cut(s) 211, 1109, 1372
Hpy188I TCNGA 9 cut(s) 16, 206, 482, 560, 713, 735, 1143, 1339, 1349
Hpy188III TCNNGA 8 cut(s) 233, 307, 319, 543, 717, 862, 1210, 1253
Hpy8I GTNNAC 3 cut(s) 211, 1109, 1372
Hpy99I CGWCG 3 cut(s) 227, 403, 418
HpyAV CCTTC 5 cut(s) 126, 316, 572, 893, 1323
HpyCH4III ACNGT 5 cut(s) 88, 124, 227, 797, 859
HpyCH4IV ACGT 2 cut(s) 36, 243
HpyCH4V TGCA 5 cut(s) 71, 772, 784, 1122, 1364
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 395, 893, 1310
HpyF3I CTNAG 4 cut(s) 541, 710, 1284, 1338
HpySE526I ACGT 2 cut(s) 36, 243
Hsp92II CATG 3 cut(s) 71, 865, 1014
HspAI GCGC 2 cut(s) 94, 293
Kpn2I TCCGGA 2 cut(s) 232, 306
Kzo9I GATC 9 cut(s) 187, 270, 472, 555, 688, 713, 787, 821, 1138
LguI GCTCTTC 2 cut(s) 941, 1150
LmnI GCTCC 2 cut(s) 79, 440
Lsp1109I GCAGC 2 cut(s) 83, 277
LweI GCATC 3 cut(s) 358, 609, 1351
MaeI CTAG 2 cut(s) 779, 1301
MaeII ACGT 2 cut(s) 36, 243
MaeIII GTNAC 4 cut(s) 88, 176, 960, 1060
MalI GATC 9 cut(s) 189, 272, 474, 557, 690, 715, 789, 823, 1140
MbiI CCGCTC 1 cut(s) 1160
MboI GATC 9 cut(s) 187, 270, 472, 555, 688, 713, 787, 821, 1138
MflI RGATCY 4 cut(s) 472, 688, 787, 821
MhlI GDGCHC 1 cut(s) 1018
MluCI AATT 4 cut(s) 301, 595, 670, 1342
MlyI GAGTC 4 cut(s) 23, 570, 596, 1212
MmeI TCCRAC 5 cut(s) 39, 177, 885, 1068, 1338
MroI TCCGGA 2 cut(s) 232, 306
MseI TTAA 3 cut(s) 723, 939, 1293
MspCI CTTAAG 1 cut(s) 938
MspI CCGG 6 cut(s) 174, 194, 233, 296, 307, 438
MspR9I CCNGG 1 cut(s) 876
MvaI CCWGG 1 cut(s) 876
MvnI CGCG 3 cut(s) 94, 320, 386
MwoI GCNNNNNNNGC 4 cut(s) 47, 395, 893, 1310
NcoI CCATGG 1 cut(s) 1010
NdeII GATC 9 cut(s) 187, 270, 472, 555, 688, 713, 787, 821, 1138
NlaIII CATG 3 cut(s) 71, 865, 1014
NlaIV GGNNCC 3 cut(s) 690, 1008, 1017
NmuCI GTSAC 3 cut(s) 88, 176, 1060
NruI TCGCGA 1 cut(s) 320
PagI TCATGA 1 cut(s) 861
PciSI GCTCTTC 2 cut(s) 941, 1150
PcsI WCGNNNNNNNCGW 2 cut(s) 219, 422
PfeI GAWTC 1 cut(s) 908
PflMI CCANNNNNTGG 1 cut(s) 1133
PfoI TCCNGGA 1 cut(s) 874
PkrI GCNGC 5 cut(s) 73, 98, 292, 388, 889
Ple19I CGATCG 1 cut(s) 273
PleI GAGTC 4 cut(s) 23, 569, 596, 1211
PmaCI CACGTG 1 cut(s) 37
PmlI CACGTG 1 cut(s) 37
PpsI GAGTC 4 cut(s) 23, 569, 596, 1211
Ppu21I YACGTR 2 cut(s) 37, 244
PpuMI RGGWCCY 1 cut(s) 1332
Psp5II RGGWCCY 1 cut(s) 1332
Psp6I CCWGG 1 cut(s) 874
PspCI CACGTG 1 cut(s) 37
PspGI CCWGG 1 cut(s) 874
PspN4I GGNNCC 3 cut(s) 690, 1008, 1017
PspPI GGNCC 3 cut(s) 432, 743, 1332
PspPPI RGGWCCY 1 cut(s) 1332
PsuI RGATCY 4 cut(s) 472, 688, 787, 821
PvuI CGATCG 1 cut(s) 273
RruI TCGCGA 1 cut(s) 320
RsaI GTAC 4 cut(s) 343, 842, 856, 1110
RsaNI GTAC 4 cut(s) 342, 841, 855, 1109
SapI GCTCTTC 2 cut(s) 941, 1150
SaqAI TTAA 3 cut(s) 723, 939, 1293
SatI GCNGC 5 cut(s) 72, 97, 291, 387, 888
Sau3AI GATC 9 cut(s) 187, 270, 472, 555, 688, 713, 787, 821, 1138
Sau96I GGNCC 3 cut(s) 432, 743, 1332
SchI GAGTC 4 cut(s) 23, 570, 596, 1212
ScrFI CCNGG 1 cut(s) 876
SduI GDGCHC 1 cut(s) 1018
SfaNI GCATC 3 cut(s) 358, 609, 1351
SinI GGWCC 3 cut(s) 432, 743, 1332
SmlI CTYRAG 1 cut(s) 938
SmoI CTYRAG 1 cut(s) 938
SpeI ACTAGT 1 cut(s) 778
Sse9I AATT 4 cut(s) 301, 595, 670, 1342
SspMI CTAG 2 cut(s) 779, 1301
StyD4I CCNGG 1 cut(s) 874
StyI CCWWGG 1 cut(s) 1010
TaaI ACNGT 5 cut(s) 88, 124, 227, 797, 859
TaiI ACGT 2 cut(s) 39, 246
TaqI TCGA 3 cut(s) 273, 716, 911
TaqII GACCGA 1 cut(s) 731
TasI AATT 4 cut(s) 301, 595, 670, 1342
TauI GCSGC 3 cut(s) 99, 389, 890
TfiI GAWTC 1 cut(s) 908
Tru1I TTAA 3 cut(s) 723, 939, 1293
Tru9I TTAA 3 cut(s) 723, 939, 1293
TscAI CASTG 1 cut(s) 661
TseFI GTSAC 3 cut(s) 88, 176, 1060
TseI GCWGC 2 cut(s) 71, 290
Tsp45I GTSAC 3 cut(s) 88, 176, 1060
TspDTI ATGAA 3 cut(s) 614, 655, 1286
TspGWI ACGGA 4 cut(s) 347, 359, 416, 1167
TspRI CASTG 1 cut(s) 661
Van91I CCANNNNNTGG 1 cut(s) 1133
Vha464I CTTAAG 1 cut(s) 938
VpaK11BI GGWCC 3 cut(s) 432, 743, 1332
XapI RAATTY 3 cut(s) 301, 595, 1342
XmiI GTMKAC 1 cut(s) 210
XspI CTAG 2 cut(s) 779, 1301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.