AT5G17040

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
5605201 .. 5607128
1928 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G17040.2

Sequence Viewer

Length: 1329 bp
ATGGCCAACTCCCACGTGGCAGTTCTCGCTTTTCCATTCGGCAGTCATGGTCAGGCTATCCTCGCCGTCACCCGTCGTCTCGCCACCGCAGCTCCTTCCACCGTCTTCTCCTTCTTGAACACCTCACAATCCAACTTCTCGTTGCTCTCCTCCGATCTTCCTCCGAACATTCGGGTCCATGACGTGTCCGACGGTGTTCCCGAGGGATACGTGCTCTCGAGGAATCCACAGGAGGCGGTCGAGCTGTTTCTTGAAGCGGCGCCGGAGATTTTTAGGAGAGAACTCGCGGTGGCGGAGACTGAGGTTGGTAGGAAAGTGACATGCATGCTCACGGATGCGTTCATCTGGTTCGCGGGGGATATGGCGGCGGAGATGAAAGTGTCGTGGGTTGCTTTCTGGACCTCCGGAACTCGCTCACTGCTCATCTCTACACAGATCTCATCAGAGAAACAATCGCTGTCAAAGGAAACATTAGGGTGTATTTCTGGAATGGAGAAGATCAGAGTTAAAGATACACCAGAAGGAGTTGTGTTTGGGAATTTAGACTCTGTTTTCTCGAAGATGTTGCACCAAATGGGACTTGCTTTGCCTCGTGCCACTACGGTTTACATGAATTCTTTTGAAGAATTAGACCCTACATTGACTGATAACCTCAGATTGAAATTCAAACGTTACCTGAGCATCGGTCCTCTTGCGTTGTTATTCTCTACTTCGCAAAGAGAAACACCATTGCATGATCCACACGGCTGCTTGGCTTGGATCAAGAAGCGGTCCACTGCTTCTGTAGTTTACATTGCCTTCGGTAGAGTCATGACACCGCCTCCTGGAGAGCTTGTAGTGGTAGCACAAGGATTGGAATCGAGTAAAGTGCCTTTTGTTTGGTCGCTCCAAGAGAAGAACATGGTTCATTTACCAAAAGGGTTTTTGGATGGGACAAGAGAGCAAGGAATGGTGGTCCCATGGGCACCACAAGTGGAGCTGCTAAACCATGAAGCAATGGGTGTGTTTGTGTCGCATGGTGGGTGGAACTCAGTGTTGGAGAGTGTATCGGCAGGTGTACCAATGATTTGTAGACCGATTTTCGGGGATCACGCACTCAATGCAAGATCCGTGGAGGCTGTGTGGGAAATTGGAATGACGATTAGTAGTGGAGTCTTCACGAAGGATGGATTTGAGGAGAGTTTGGATCGGGTTTTGGTTCAAGATGATGGCAAGAAGATGAAGTTTAATGCCAAGAAGCTTAAAGAACTAGCACAAGAAGCTGTCTCTACGGAAGGAAGCTCCTTTGAGAATTTCAAAGGTTTGTTGGACGAAGTTATGAAAGTTTGA

Protein Analysis

442

Amino Acids

48.55

Weight (kDa)

5.87

Isoelectric Point (pI)

39.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 143 - 314 1.1e-31 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 216 - 313 3.7e-06 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0009969)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1043
Acc36I ACCTGC 1 cut(s) 1043
AccB1I GGYRCC 2 cut(s) 259, 964
AccI GTMKAC 1 cut(s) 1072
AccII CGCG 2 cut(s) 287, 353
AccIII TCCGGA 1 cut(s) 404
AclI AACGTT 1 cut(s) 670
AclWI GGATC 5 cut(s) 731, 767, 1095, 1101, 1194
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 538, 613, 662, 1291
AcvI CACGTG 1 cut(s) 16
AcyI GRCGYC 1 cut(s) 260
AfaI GTAC 1 cut(s) 1059
AfiI CCNNNNNNNGG 2 cut(s) 824, 1082
AflIII ACRYGT 1 cut(s) 183
AgsI TTSAA 7 cut(s) 118, 254, 623, 661, 667, 1202, 1297
AjiI CACGTC 1 cut(s) 184
AjnI CCWGG 1 cut(s) 823
AjuI GAANNNNNNNTTGG 2 cut(s) 1019, 1051
AluBI AGCT 7 cut(s) 92, 244, 832, 979, 1240, 1262, 1281
AluI AGCT 7 cut(s) 92, 244, 832, 979, 1240, 1262, 1281
Alw21I GWGCWC 1 cut(s) 216
Alw26I GTCTC 3 cut(s) 83, 290, 1270
AlwI GGATC 5 cut(s) 731, 767, 1095, 1101, 1194
Ama87I CYCGRG 2 cut(s) 200, 217
Aor13HI TCCGGA 1 cut(s) 404
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 3 cut(s) 89, 747, 979
ApoI RAATTY 4 cut(s) 538, 613, 662, 1291
AspLEI GCGC 1 cut(s) 262
AspS9I GGNCC 5 cut(s) 175, 399, 686, 771, 955
AsuHPI GGTGA 1 cut(s) 61
AvaI CYCGRG 2 cut(s) 200, 217
AvaII GGWCC 5 cut(s) 175, 399, 686, 771, 955
BaeGI GKGCMC 1 cut(s) 967
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 259, 964
BauI CACGAG 1 cut(s) 591
BbrPI CACGTG 1 cut(s) 16
BbsI GAAGAC 2 cut(s) 97, 1147
Bbv12I GWGCWC 1 cut(s) 216
BbvI GCAGC 3 cut(s) 101, 734, 966
BccI CCATC 3 cut(s) 923, 1160, 1202
BceAI ACGGC 2 cut(s) 50, 760
BcgI CGANNNNNNTGC 4 cut(s) 547, 581, 850, 884
BciT130I CCWGG 1 cut(s) 825
BciVI GTATCC 1 cut(s) 200
BcoDI GTCTC 3 cut(s) 83, 290, 1270
BfaI CTAG 1 cut(s) 1250
BfmI CTRYAG 1 cut(s) 783
BfoI RGCGCY 1 cut(s) 263
BfuAI ACCTGC 1 cut(s) 1043
BfuI GTATCC 1 cut(s) 200
BglII AGATCT 1 cut(s) 435
BisI GCNGC 5 cut(s) 90, 258, 366, 748, 980
BlsI GCNGC 5 cut(s) 91, 259, 367, 749, 981
Bme1390I CCNGG 1 cut(s) 825
Bme18I GGWCC 5 cut(s) 175, 399, 686, 771, 955
BmeT110I CYCGRG 2 cut(s) 200, 217
BmgBI CACGTC 1 cut(s) 184
BmgT120I GGNCC 5 cut(s) 175, 399, 686, 771, 955
BmiI GGNNCC 4 cut(s) 176, 261, 957, 966
BmrFI CCNGG 1 cut(s) 825
BmsI GCATC 2 cut(s) 325, 690
BpiI GAAGAC 2 cut(s) 97, 1147
BpmI CTGGAG 1 cut(s) 846
Bpu10I CCTNAGC 1 cut(s) 677
BsaAI YACGTR 2 cut(s) 16, 211
BsaBI GATNNNNATC 1 cut(s) 856
BsaHI GRCGYC 1 cut(s) 260
BsaJI CCNNGG 3 cut(s) 201, 959, 1110
BsaWI WCCGGW 1 cut(s) 404
BsaXI ACNNNNNCTCC 8 cut(s) 76, 106, 805, 819, 835, 849, 1106, 1136
Bsc4I CCNNNNNNNGG 2 cut(s) 824, 1082
Bse3DI GCAATG 3 cut(s) 728, 792, 1002
Bse8I GATNNNNATC 1 cut(s) 856
BseAI TCCGGA 1 cut(s) 404
BseBI CCWGG 1 cut(s) 825
BseDI CCNNGG 3 cut(s) 201, 959, 1110
BseGI GGATG 3 cut(s) 340, 934, 1171
BseJI GATNNNNATC 1 cut(s) 856
BseLI CCNNNNNNNGG 2 cut(s) 824, 1082
BseMI GCAATG 3 cut(s) 728, 792, 1002
BseMII CTCAG 4 cut(s) 291, 667, 668, 1044
BseRI GAGGAG 2 cut(s) 139, 1190
BseSI GKGCMC 1 cut(s) 967
BseXI GCAGC 3 cut(s) 101, 734, 966
Bsh1236I CGCG 2 cut(s) 287, 353
Bsh1285I CGRYCG 1 cut(s) 240
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 2 cut(s) 259, 964
BsiEI CGRYCG 1 cut(s) 240
BsiHKAI GWGCWC 1 cut(s) 216
BsiHKCI CYCGRG 2 cut(s) 200, 217
BsiSI CCGG 2 cut(s) 263, 405
BslFI GGGAC 3 cut(s) 591, 941, 946
BslI CCNNNNNNNGG 2 cut(s) 824, 1082
BsmAI GTCTC 3 cut(s) 83, 290, 1270
BsmBI CGTCTC 1 cut(s) 83
BsmFI GGGAC 3 cut(s) 591, 941, 946
BsnI GGCC 1 cut(s) 5
BsoBI CYCGRG 2 cut(s) 200, 217
Bsp1286I GDGCHC 2 cut(s) 216, 967
Bsp13I TCCGGA 1 cut(s) 404
Bsp143I GATC 8 cut(s) 154, 435, 498, 736, 759, 1087, 1106, 1186
Bsp19I CCATGG 1 cut(s) 959
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 4 cut(s) 292, 666, 669, 1043
BspEI TCCGGA 1 cut(s) 404
BspFNI CGCG 2 cut(s) 287, 353
BspHI TCATGA 1 cut(s) 810
BspLI GGNNCC 4 cut(s) 176, 261, 957, 966
BspMI ACCTGC 1 cut(s) 1043
BspPI GGATC 5 cut(s) 731, 767, 1095, 1101, 1194
BspT107I GGYRCC 2 cut(s) 259, 964
BsrDI GCAATG 3 cut(s) 728, 792, 1002
BssECI CCNNGG 3 cut(s) 201, 959, 1110
BssMI GATC 8 cut(s) 154, 435, 498, 736, 759, 1087, 1106, 1186
BssNI GRCGYC 1 cut(s) 260
BssSI CACGAG 1 cut(s) 591
BssT1I CCWWGG 1 cut(s) 959
Bst2BI CACGAG 1 cut(s) 591
Bst2UI CCWGG 1 cut(s) 825
Bst4CI ACNGT 3 cut(s) 103, 194, 604
BstACI GRCGYC 1 cut(s) 260
BstAPI GCANNNNNTGC 1 cut(s) 1100
BstBAI YACGTR 2 cut(s) 16, 211
BstC8I GCNNGC 1 cut(s) 326
BstDEI CTNAG 4 cut(s) 300, 653, 677, 1030
BstDSI CCRYGG 2 cut(s) 959, 1110
BstF5I GGATG 3 cut(s) 340, 934, 1171
BstFNI CGCG 2 cut(s) 287, 353
BstH2I RGCGCY 1 cut(s) 263
BstHHI GCGC 1 cut(s) 262
BstKTI GATC 8 cut(s) 157, 438, 501, 739, 762, 1090, 1109, 1189
BstMAI GTCTC 3 cut(s) 83, 290, 1270
BstMBI GATC 8 cut(s) 154, 435, 498, 736, 759, 1087, 1106, 1186
BstMCI CGRYCG 1 cut(s) 240
BstMWI GCNNNNNNNGC 5 cut(s) 26, 62, 89, 1100, 1259
BstNI CCWGG 1 cut(s) 825
BstNSI RCATGY 2 cut(s) 324, 328
BstSCI CCNGG 1 cut(s) 823
BstSFI CTRYAG 1 cut(s) 783
BstSLI GKGCMC 1 cut(s) 967
BstUI CGCG 2 cut(s) 287, 353
BstV1I GCAGC 3 cut(s) 101, 734, 966
BstV2I GAAGAC 2 cut(s) 97, 1147
BstX2I RGATCY 2 cut(s) 435, 1106
BstYI RGATCY 2 cut(s) 435, 1106
BsuI GTATCC 1 cut(s) 200
BsuRI GGCC 1 cut(s) 5
BtgI CCRYGG 2 cut(s) 959, 1110
BtrI CACGTC 1 cut(s) 184
BtsCI GGATG 3 cut(s) 340, 934, 1171
BtsI GCAGTG 2 cut(s) 416, 774
BtsIMutI CAGTG 3 cut(s) 416, 774, 1038
BveI ACCTGC 1 cut(s) 1043
Cac8I GCNNGC 1 cut(s) 326
CciI TCATGA 1 cut(s) 810
CfoI GCGC 1 cut(s) 262
Cfr13I GGNCC 5 cut(s) 175, 399, 686, 771, 955
Csp6I GTAC 1 cut(s) 1058
CspCI CAANNNNNGTGG 2 cut(s) 1092, 1127
CviQI GTAC 1 cut(s) 1058
DdeI CTNAG 4 cut(s) 300, 653, 677, 1030
DinI GGCGCC 1 cut(s) 261
DpnI GATC 8 cut(s) 156, 437, 500, 738, 761, 1089, 1108, 1188
DpnII GATC 8 cut(s) 154, 435, 498, 736, 759, 1087, 1106, 1186
EaeI YGGCCR 1 cut(s) 3
EciI GGCGGA 2 cut(s) 308, 383
Eco130I CCWWGG 1 cut(s) 959
Eco47I GGWCC 5 cut(s) 175, 399, 686, 771, 955
Eco72I CACGTG 1 cut(s) 16
Eco88I CYCGRG 2 cut(s) 200, 217
EcoRI GAATTC 1 cut(s) 613
EcoRII CCWGG 1 cut(s) 823
EcoT14I CCWWGG 1 cut(s) 959
EcoT22I ATGCAT 1 cut(s) 326
EgeI GGCGCC 1 cut(s) 261
EheI GGCGCC 1 cut(s) 261
ErhI CCWWGG 1 cut(s) 959
Esp3I CGTCTC 1 cut(s) 83
FaqI GGGAC 3 cut(s) 591, 941, 946
FauI CCCGC 1 cut(s) 346
FblI GTMKAC 1 cut(s) 1072
Fnu4HI GCNGC 5 cut(s) 90, 258, 366, 748, 980
FokI GGATG 3 cut(s) 347, 941, 1178
Fsp4HI GCNGC 5 cut(s) 90, 258, 366, 748, 980
FspBI CTAG 1 cut(s) 1250
GlaI GCGC 1 cut(s) 261
GluI GCNGC 5 cut(s) 90, 258, 366, 748, 980
GsuI CTGGAG 1 cut(s) 846
HaeII RGCGCY 1 cut(s) 263
HaeIII GGCC 1 cut(s) 5
HapII CCGG 2 cut(s) 263, 405
HhaI GCGC 1 cut(s) 262
Hin1I GRCGYC 1 cut(s) 260
Hin6I GCGC 1 cut(s) 260
HinP1I GCGC 1 cut(s) 260
HindIII AAGCTT 1 cut(s) 1238
HinfI GANTC 5 cut(s) 223, 545, 807, 857, 1152
HpaII CCGG 2 cut(s) 263, 405
HphI GGTGA 1 cut(s) 61
Hpy166II GTNNAC 5 cut(s) 607, 774, 790, 1058, 1073
Hpy188I TCNGA 6 cut(s) 154, 165, 190, 445, 503, 656
Hpy8I GTNNAC 5 cut(s) 607, 774, 790, 1058, 1073
Hpy99I CGWCG 2 cut(s) 78, 194
HpyAV CCTTC 6 cut(s) 105, 121, 515, 808, 1156, 1268
HpyCH4III ACNGT 3 cut(s) 103, 194, 604
HpyCH4IV ACGT 4 cut(s) 15, 183, 210, 670
HpyCH4V TGCA 4 cut(s) 324, 568, 733, 1103
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 62, 89, 1100, 1259
HpyF3I CTNAG 4 cut(s) 300, 653, 677, 1030
HpySE526I ACGT 4 cut(s) 15, 183, 210, 670
Hsp92I GRCGYC 1 cut(s) 260
HspAI GCGC 1 cut(s) 260
KasI GGCGCC 1 cut(s) 259
Kpn2I TCCGGA 1 cut(s) 404
Kzo9I GATC 8 cut(s) 154, 435, 498, 736, 759, 1087, 1106, 1186
LmnI GCTCC 4 cut(s) 97, 891, 976, 1286
Lsp1109I GCAGC 3 cut(s) 101, 734, 966
LweI GCATC 2 cut(s) 325, 690
MaeI CTAG 1 cut(s) 1250
MaeII ACGT 4 cut(s) 15, 183, 210, 670
MaeIII GTNAC 3 cut(s) 67, 316, 671
MalI GATC 8 cut(s) 156, 437, 500, 738, 761, 1089, 1108, 1188
MboI GATC 8 cut(s) 154, 435, 498, 736, 759, 1087, 1106, 1186
MboII GAAGA 8 cut(s) 97, 149, 508, 571, 635, 907, 1147, 1228
MflI RGATCY 2 cut(s) 435, 1106
MhlI GDGCHC 2 cut(s) 216, 967
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 6 cut(s) 538, 613, 626, 662, 1128, 1291
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 260
MlyI GAGTC 3 cut(s) 539, 816, 1161
MmeI TCCRAC 4 cut(s) 156, 213, 1017, 1287
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 326
MroI TCCGGA 1 cut(s) 404
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 507, 1227, 1242
MslI CAYNNNNRTG 1 cut(s) 475
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 2 cut(s) 263, 405
MspR9I CCNGG 1 cut(s) 825
MvaI CCWGG 1 cut(s) 825
MvnI CGCG 2 cut(s) 287, 353
MwoI GCNNNNNNNGC 5 cut(s) 26, 62, 89, 1100, 1259
NarI GGCGCC 1 cut(s) 260
NcoI CCATGG 1 cut(s) 959
NdeII GATC 8 cut(s) 154, 435, 498, 736, 759, 1087, 1106, 1186
NlaIV GGNNCC 4 cut(s) 176, 261, 957, 966
NmuCI GTSAC 2 cut(s) 67, 316
NsiI ATGCAT 1 cut(s) 326
NspI RCATGY 2 cut(s) 324, 328
PaeI GCATGC 1 cut(s) 328
PaeR7I CTCGAG 1 cut(s) 217
PagI TCATGA 1 cut(s) 810
PaqCI CACCTGC 1 cut(s) 1043
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PfeI GAWTC 2 cut(s) 223, 857
PfoI TCCNGGA 1 cut(s) 823
PkrI GCNGC 5 cut(s) 91, 259, 367, 749, 981
PleI GAGTC 3 cut(s) 539, 815, 1160
PluTI GGCGCC 1 cut(s) 263
PmaCI CACGTG 1 cut(s) 16
PmlI CACGTG 1 cut(s) 16
PpsI GAGTC 3 cut(s) 539, 815, 1160
Ppu21I YACGTR 2 cut(s) 16, 211
Psp1406I AACGTT 1 cut(s) 670
Psp6I CCWGG 1 cut(s) 823
PspCI CACGTG 1 cut(s) 16
PspGI CCWGG 1 cut(s) 823
PspN4I GGNNCC 4 cut(s) 176, 261, 957, 966
PspPI GGNCC 5 cut(s) 175, 399, 686, 771, 955
PsuI RGATCY 2 cut(s) 435, 1106
RsaI GTAC 1 cut(s) 1059
RsaNI GTAC 1 cut(s) 1058
RseI CAYNNNNRTG 1 cut(s) 475
SaqAI TTAA 3 cut(s) 507, 1227, 1242
SatI GCNGC 5 cut(s) 90, 258, 366, 748, 980
Sau3AI GATC 8 cut(s) 154, 435, 498, 736, 759, 1087, 1106, 1186
Sau96I GGNCC 5 cut(s) 175, 399, 686, 771, 955
SchI GAGTC 3 cut(s) 539, 816, 1161
ScrFI CCNGG 1 cut(s) 825
SduI GDGCHC 2 cut(s) 216, 967
SfaNI GCATC 2 cut(s) 325, 690
SfcI CTRYAG 1 cut(s) 783
SfoI GGCGCC 1 cut(s) 261
Sfr274I CTCGAG 1 cut(s) 217
SinI GGWCC 5 cut(s) 175, 399, 686, 771, 955
SlaI CTCGAG 1 cut(s) 217
SmiMI CAYNNNNRTG 1 cut(s) 475
SmlI CTYRAG 1 cut(s) 217
SmoI CTYRAG 1 cut(s) 217
SphI GCATGC 1 cut(s) 328
Sse9I AATT 6 cut(s) 538, 613, 626, 662, 1128, 1291
SspDI GGCGCC 1 cut(s) 259
SspMI CTAG 1 cut(s) 1250
StyD4I CCNGG 1 cut(s) 823
StyI CCWWGG 1 cut(s) 959
TaaI ACNGT 3 cut(s) 103, 194, 604
TaiI ACGT 4 cut(s) 18, 186, 213, 673
TaqI TCGA 4 cut(s) 218, 240, 557, 860
TaqII GACCGA 2 cut(s) 674, 1090
TasI AATT 6 cut(s) 538, 613, 626, 662, 1128, 1291
TauI GCSGC 2 cut(s) 260, 368
TfiI GAWTC 2 cut(s) 223, 857
Tru1I TTAA 3 cut(s) 507, 1227, 1242
Tru9I TTAA 3 cut(s) 507, 1227, 1242
TscAI CASTG 3 cut(s) 423, 781, 1038
TseFI GTSAC 2 cut(s) 67, 316
TseI GCWGC 3 cut(s) 89, 747, 979
Tsp45I GTSAC 2 cut(s) 67, 316
TspDTI ATGAA 6 cut(s) 331, 389, 626, 896, 1005, 1235
TspGWI ACGGA 3 cut(s) 347, 1099, 1286
TspRI CASTG 3 cut(s) 423, 781, 1038
VpaK11BI GGWCC 5 cut(s) 175, 399, 686, 771, 955
XapI RAATTY 4 cut(s) 538, 613, 662, 1291
XceI RCATGY 2 cut(s) 324, 328
XcmI CCANNNNNNNNNTGG 1 cut(s) 13
XhoI CTCGAG 1 cut(s) 217
XmiI GTMKAC 1 cut(s) 1072
XspI CTAG 1 cut(s) 1250
Zsp2I ATGCAT 1 cut(s) 326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.