Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002029

Physical Location & Seq

Genomic Coordinates Forward (+)

11232318 .. 11237594

Gene Structure 5277 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G31360.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGGAAAGTGAAGCAATTCAAGAGGATCTTCAGAATTTAGACGTCGAGTTAAAGGATGTTCAAGGTCAGATAAGTGCTTTGATTGAGCATCAAGATAGGTTATACGAGAGAAAGTCTGAGTTAAAGACATTGTTAAAAGCATTAGCAGCATCAGGAAGTCCTGTTGCATCATCTGGTGGCTCTAGTGCTATAGAGAATTGGTCTGAGACATTTGAGTGGGATTCTCGTGCTGACGATGTTAGGTTTAACGTTTTTGGTATATCCAAGTATAGGGCTAACCAGAAGGAAATTATTAACGCTATAATGACGGGAAGAGATGTCCTGGTGATCATGGCAGCAGGTGGTGGGAAGAGTCTTTGCTATCAACTTCCAGCTATGCTTCGTGGTGGGACAACTCTTGTTGTCAGTCCTCTACTTTCACTGATTCAGGATCAGGTTATGGGTTTGGCTGCTCTAGGAATCTCAGCCTACATGCTGACTTCTACTTCTGGCAAGGAAAATGAGAAATTTGTGTACAAGGCACTTGAAAAGGGTGAAGATGACCTCAAGATACTTTATGTAACACCCGAGAAGGTATCAAAGAGCAAAAGATTCATGTCGAAGCTTGAAAAGTGTCACAATGCTGGCCGCCTCTCTCTTATATCAATTGATGAGGCTCATTGTTGTAGTCAGTGGGGTCATGATTTTCGCCCTGATTACAAGAACTTAAGCATTCTGAAAACCCAGTTTCCCAAAGTTCCCATGGTGGCTTTAACTGCAACTGCTACACAGAAAGTTCAAAATGATCTGATAGAGATGCTGCATATTCCTAAATGCGTCAAATTTGTGAGCAGTGTTAACAGGCCAAATCTCTTTTACTCGGTCCGAGAAAAGTCGGCAGTTGGTAAATTAGTGGTTGATGAAATTGCAGAATTCATACGGGAATCATACTCTAACAATGAATCTGGGATAGTCTATTGTTTCTCCCGGAAGGAGTGTGAACAGATTGCAGGTGATTTACGAGAGCGAGGGATTTCTGCTGATTATTACCACGCAGACATGGATGCAAATATGCGCGAAAAAGTTCATATGCGATGGAGCAAGAACAAGTTGCAGGTCATTGTTGGAACAGTTGCGTTTGGTATGGGAATCAACAAGCCTGATGTCAGGTTTGTCATCCACCACAGTTTGAGCAAATCAATGGAGACTTACTACCAGGAGAGTGGCCGTGCCGGTCGTGATGGCCTCCCATCCGAATGTATCCTCTTTTTTCGTTCGGCTGATGTTCCCAGGCAGAGTTCCATGGTCTTCTACGAGTATTCTGGTCTCCAAAATCTCTACGATATAGTAAGATACTGTCAGTCTAAAACAAAATGTCGTCGAAGCGCATTTTTCCGTCATTTTGGGGAACCATCACAAGATTGCAATGGAATGTGTGACAACTGTGCCTTGTCAAGTGAGGTCAAGGAAGTTGATGTATCGGACCTGTCTAAGCTCGTGGTTTCTATGGTGCAAGAAACGCAAGCCAAGGATCAAAGAGTAACGATGTTACAGTTGGGTGACAAACTCAGAAATAAGCACAAGGATCTAATTGCTGAGTTAAAGAGAGACGAGGTAGAACATCTCGTGATAAAACTGATTGTTGACTCGGTATTGAAAGAAGAATTTCAGCACACACCATATTCGACAAACGCTTATGTAACAATGGGACCATTGGCCAACCAATTGTTGCAAGGAAGAAAGACAATCAAAATGGAAACCTCTAGCAGGCAAACCAAGAAATTGAAAAGAAGTATTACATTTTCCGGGTTGGAACTCAAGCTCGACGAGCTACGGAAAGAGATATCTGCAGCTGATGGAAGCATACTCCCTCACACAGTCCTCTCAACCCAGCAGATTGGCTCGATAAGTTCCCAAAAACCAGTTTCATTACAAGAGTTGGAGAGTATTATAGGAAAATTGAAAACAGAAAAGTATGGAGACAGGATTCTAGAAGAAGTGATGAGACACGAAGCAGTCTCTGAACAACTTGTTGAAGATCCAACAAAGGAAGAGACATGTAAAAGCAGATTAAGAAAGAGAGCTAAGACACAGAAGGATGTTGTATTGGTAGAGAGCAGCGGAGAAGAAGAAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009378 GO:0009987 GO:0016043 GO:0016462 GO:0016592 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0033554 GO:0034641 GO:0042623 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HRDC Helicase_C RQC RecQ_Zn_bind

Protein Analysis

705

Amino Acids

79.37

Weight (kDa)

7.21

Isoelectric Point (pI)

41.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ResIII	PF04851	89 - 255	1.6e-06	Type III restriction enzyme, res subunit
DEAD	PF00270	92 - 260	1.4e-26	DEAD/DEAH box helicase
Helicase_C	PF00271	303 - 408	2.8e-20	Helicase conserved C-terminal domain
RecQ_Zn_bind	PF16124	424 - 475	2.7e-12	RecQ zinc-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31360 AT1G31360 AT1G31360 AT1G31360 AT1G31360 AT1G31360 AT1G31360 AT1G31360
fragaria_vesca	FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180
malus_domestica	MD00G1078900.v1.1 MD11G1048700.v1.1
prunus_persica	Prupe.5G018600_v2.0.a1 Prupe.5G018600_v2.0.a1 Prupe.5G018600_v2.0.a1 Prupe.5G018600_v2.0.a1 Prupe.5G018600_v2.0.a1 Prupe.5G018600_v2.0.a1
pyrus_communis	pycom16g25560
rosa_chinensis	RchiOBHm_Chr7g0213961
rosa_laevigata	RLG00000002767
rosa_multiflora	Rmu_sc0000328.1_g000007
rosa_roxburghii	Rroxscaffold_3G00245620
rosa_rugosa	Rorug06G0229700 Rorug07G0145100
rosa_samantha	Rh7AG278100 Rh7BG271700 Rh7CG297100 Rh7DG283700
rosa_wichuraiana	Rw7G023940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	329, 980
AatII	GACGTC	1 cut(s)	45
Acc36I	ACCTGC	3 cut(s)	329, 980, 1084
AccII	CGCG	1 cut(s)	1056
AciI	CCGC	2 cut(s)	628, 2100
AclI	AACGTT	1 cut(s)	249
AclWI	GGATC	5 cut(s)	33, 438, 1518, 1572, 2012
AcoI	YGGCCR	3 cut(s)	625, 1204, 1695
AcsI	RAATTY	5 cut(s)	34, 506, 821, 911, 1643
AcuI	CTGAAG	1 cut(s)	14
AcyI	GRCGYC	1 cut(s)	42
AfaI	GTAC	1 cut(s)	515
AfiI	CCNNNNNNNGG	2 cut(s)	270, 1746
AflII	CTTAAG	1 cut(s)	706
AflIII	ACRYGT	1 cut(s)	2036
AgsI	TTSAA	9 cut(s)	20, 62, 527, 608, 779, 1636, 1765, 1942, 2015
AjnI	CCWGG	3 cut(s)	321, 1194, 1268
AluBI	AGCT	8 cut(s)	374, 604, 1474, 1801, 1810, 1832, 2063, 2114
AluI	AGCT	8 cut(s)	374, 604, 1474, 1801, 1810, 1832, 2063, 2114
Alw26I	GTCTC	8 cut(s)	200, 1178, 1310, 1581, 1953, 1978, 2002, 2027
AlwI	GGATC	5 cut(s)	33, 438, 1518, 1572, 2012
AlwNI	CAGNNNCTG	1 cut(s)	2000
Ama87I	CYCGRG	1 cut(s)	566
AoxI	GGCC	5 cut(s)	625, 842, 1204, 1222, 1695
ApeKI	GCWGC	6 cut(s)	146, 335, 449, 799, 1829, 2097
ApoI	RAATTY	5 cut(s)	34, 506, 821, 911, 1643
Asp700I	GAANNNNTTC	3 cut(s)	15, 1062, 1644
AspLEI	GCGC	2 cut(s)	1056, 1367
AspS9I	GGNCC	3 cut(s)	862, 1462, 1688
AsuC2I	CCSGG	2 cut(s)	967, 1786
AsuHPI	GGTGA	4 cut(s)	337, 545, 1004, 1550
AvaI	CYCGRG	1 cut(s)	566
AvaII	GGWCC	3 cut(s)	862, 1462, 1688
BalI	TGGCCA	1 cut(s)	1697
BauI	CACGAG	3 cut(s)	225, 1475, 1604
BbsI	GAAGAC	1 cut(s)	1279
BbvI	GCAGC	6 cut(s)	158, 347, 436, 786, 1841, 2109
BccI	CCATC	5 cut(s)	1068, 1214, 1237, 1399, 1829
BceAI	ACGGC	1 cut(s)	1191
BciT130I	CCWGG	3 cut(s)	323, 1196, 1270
BciVI	GTATCC	1 cut(s)	1250
BclI	TGATCA	1 cut(s)	327
BcnI	CCSGG	2 cut(s)	967, 1786
BcoDI	GTCTC	8 cut(s)	200, 1178, 1310, 1581, 1953, 1978, 2002, 2027
BfaI	CTAG	4 cut(s)	183, 455, 1743, 1970
BfmI	CTRYAG	2 cut(s)	189, 1827
BfrI	CTTAAG	1 cut(s)	706
BfuAI	ACCTGC	3 cut(s)	329, 980, 1084
BfuI	GTATCC	1 cut(s)	1250
BisI	GCNGC	7 cut(s)	147, 336, 450, 628, 800, 1830, 2098
BlsI	GCNGC	7 cut(s)	148, 337, 451, 629, 801, 1831, 2099
Bme1390I	CCNGG	5 cut(s)	323, 967, 1196, 1270, 1786
Bme18I	GGWCC	3 cut(s)	862, 1462, 1688
BmeT110I	CYCGRG	1 cut(s)	566
BmgT120I	GGNCC	3 cut(s)	862, 1462, 1688
BmiI	GGNNCC	2 cut(s)	1389, 1689
BmrFI	CCNGG	5 cut(s)	323, 967, 1196, 1270, 1786
BmrI	ACTGGG	1 cut(s)	718
BmsI	GCATC	5 cut(s)	97, 158, 176, 786, 1033
BmuI	ACTGGG	1 cut(s)	718
BpiI	GAAGAC	1 cut(s)	1279
BpuEI	CTTGAG	2 cut(s)	530, 1781
BpuMI	CCSGG	2 cut(s)	967, 1786
BsaHI	GRCGYC	1 cut(s)	42
BsaI	GGTCTC	1 cut(s)	1310
BsaJI	CCNNGG	4 cut(s)	741, 1268, 1281, 1506
Bsc4I	CCNNNNNNNGG	2 cut(s)	270, 1746
Bse118I	RCCGGY	1 cut(s)	1211
Bse1I	ACTGG	2 cut(s)	724, 1901
Bse3DI	GCAATG	1 cut(s)	1411
BseBI	CCWGG	3 cut(s)	323, 1196, 1270
BseDI	CCNNGG	4 cut(s)	741, 1268, 1281, 1506
BseGI	GGATG	5 cut(s)	61, 1048, 1155, 1229, 2083
BseLI	CCNNNNNNNGG	2 cut(s)	270, 1746
BseMI	GCAATG	1 cut(s)	1411
BseMII	CTCAG	5 cut(s)	108, 195, 477, 1561, 1566
BseNI	ACTGG	2 cut(s)	724, 1901
BseXI	GCAGC	6 cut(s)	158, 347, 436, 786, 1841, 2109
BseYI	CCCAGC	1 cut(s)	1869
Bsh1236I	CGCG	1 cut(s)	1056
Bsh1285I	CGRYCG	1 cut(s)	1216
BshFI	GGCC	5 cut(s)	627, 844, 1206, 1224, 1697
BsiEI	CGRYCG	1 cut(s)	1216
BsiHKCI	CYCGRG	1 cut(s)	566
BsiSI	CCGG	3 cut(s)	967, 1212, 1785
BslFI	GGGAC	2 cut(s)	403, 1701
BslI	CCNNNNNNNGG	2 cut(s)	270, 1746
BsmAI	GTCTC	8 cut(s)	200, 1178, 1310, 1581, 1953, 1978, 2002, 2027
BsmBI	CGTCTC	1 cut(s)	1581
BsmFI	GGGAC	2 cut(s)	403, 1701
BsmI	GAATGC	1 cut(s)	711
BsnI	GGCC	5 cut(s)	627, 844, 1206, 1224, 1697
Bso31I	GGTCTC	1 cut(s)	1310
BsoBI	CYCGRG	1 cut(s)	566
Bsp1407I	TGTACA	1 cut(s)	513
Bsp143I	GATC	7 cut(s)	25, 327, 430, 784, 1510, 1564, 2017
Bsp19I	CCATGG	2 cut(s)	741, 1281
BspACI	CCGC	2 cut(s)	628, 2100
BspANI	GGCC	5 cut(s)	627, 844, 1206, 1224, 1697
BspCNI	CTCAG	5 cut(s)	109, 196, 476, 1560, 1567
BspFNI	CGCG	1 cut(s)	1056
BspHI	TCATGA	1 cut(s)	679
BspLI	GGNNCC	2 cut(s)	1389, 1689
BspMAI	CTGCAG	1 cut(s)	1831
BspMI	ACCTGC	3 cut(s)	329, 980, 1084
BspPI	GGATC	5 cut(s)	33, 438, 1518, 1572, 2012
BspTI	CTTAAG	1 cut(s)	706
BspTNI	GGTCTC	1 cut(s)	1310
BsrDI	GCAATG	1 cut(s)	1411
BsrFI	RCCGGY	1 cut(s)	1211
BsrGI	TGTACA	1 cut(s)	513
BsrI	ACTGG	2 cut(s)	724, 1901
BssAI	RCCGGY	1 cut(s)	1211
BssECI	CCNNGG	4 cut(s)	741, 1268, 1281, 1506
BssMI	GATC	7 cut(s)	25, 327, 430, 784, 1510, 1564, 2017
BssNI	GRCGYC	1 cut(s)	42
BssSI	CACGAG	3 cut(s)	225, 1475, 1604
BssT1I	CCWWGG	3 cut(s)	741, 1281, 1506
Bst2BI	CACGAG	3 cut(s)	225, 1475, 1604
Bst2UI	CCWGG	3 cut(s)	323, 1196, 1270
Bst4CI	ACNGT	6 cut(s)	1111, 1166, 1337, 1424, 1533, 1858
Bst6I	CTCTTC	3 cut(s)	307, 344, 2025
BstACI	GRCGYC	1 cut(s)	42
BstAFI	CTTAAG	1 cut(s)	706
BstAUI	TGTACA	1 cut(s)	513
BstC8I	GCNNGC	3 cut(s)	625, 1503, 1748
BstDEI	CTNAG	7 cut(s)	117, 204, 463, 1470, 1547, 1575, 2064
BstDSI	CCRYGG	2 cut(s)	741, 1281
BstENI	CCTNNNNNAGG	1 cut(s)	1744
BstF5I	GGATG	5 cut(s)	61, 1048, 1155, 1229, 2083
BstFNI	CGCG	1 cut(s)	1056
BstHHI	GCGC	2 cut(s)	1056, 1367
BstKTI	GATC	7 cut(s)	28, 330, 433, 787, 1513, 1567, 2020
BstMAI	GTCTC	8 cut(s)	200, 1178, 1310, 1581, 1953, 1978, 2002, 2027
BstMBI	GATC	7 cut(s)	25, 327, 430, 784, 1510, 1564, 2017
BstMCI	CGRYCG	1 cut(s)	1216
BstMWI	GCNNNNNNNGC	4 cut(s)	146, 755, 1498, 1807
BstNI	CCWGG	3 cut(s)	323, 1196, 1270
BstNSI	RCATGY	2 cut(s)	475, 2040
BstSCI	CCNGG	5 cut(s)	321, 965, 1194, 1268, 1784
BstSFI	CTRYAG	2 cut(s)	189, 1827
BstUI	CGCG	1 cut(s)	1056
BstV1I	GCAGC	6 cut(s)	158, 347, 436, 786, 1841, 2109
BstV2I	GAAGAC	1 cut(s)	1279
BstX2I	RGATCY	3 cut(s)	25, 1564, 2017
BstXI	CCANNNNNNTGG	2 cut(s)	1202, 1877
BstYI	RGATCY	3 cut(s)	25, 1564, 2017
BsuI	GTATCC	1 cut(s)	1250
BsuRI	GGCC	5 cut(s)	627, 844, 1206, 1224, 1697
BtgI	CCRYGG	2 cut(s)	741, 1281
BtgZI	GCGATG	1 cut(s)	1087
BtsCI	GGATG	5 cut(s)	61, 1048, 1155, 1229, 2083
BtsI	GCAGTG	1 cut(s)	838
BtsIMutI	CAGTG	3 cut(s)	419, 677, 838
BveI	ACCTGC	3 cut(s)	329, 980, 1084
Cac8I	GCNNGC	3 cut(s)	625, 1503, 1748
CaiI	CAGNNNCTG	1 cut(s)	2000
CciI	TCATGA	1 cut(s)	679
CfoI	GCGC	2 cut(s)	1056, 1367
Cfr10I	RCCGGY	1 cut(s)	1211
Cfr13I	GGNCC	3 cut(s)	862, 1462, 1688
CpoI	CGGWCCG	1 cut(s)	862
CseI	GACGC	1 cut(s)	805
Csp6I	GTAC	1 cut(s)	514
CspI	CGGWCCG	1 cut(s)	862
CviAII	CATG	8 cut(s)	331, 472, 595, 680, 742, 1039, 1282, 2037
CviQI	GTAC	1 cut(s)	514
DdeI	CTNAG	7 cut(s)	117, 204, 463, 1470, 1547, 1575, 2064
DpnI	GATC	7 cut(s)	27, 329, 432, 786, 1512, 1566, 2019
DpnII	GATC	7 cut(s)	25, 327, 430, 784, 1510, 1564, 2017
EaeI	YGGCCR	3 cut(s)	625, 1204, 1695
Eam1104I	CTCTTC	3 cut(s)	307, 344, 2025
EarI	CTCTTC	3 cut(s)	307, 344, 2025
Eco130I	CCWWGG	3 cut(s)	741, 1281, 1506
Eco31I	GGTCTC	1 cut(s)	1310
Eco32I	GATATC	1 cut(s)	1824
Eco47I	GGWCC	3 cut(s)	862, 1462, 1688
Eco57I	CTGAAG	1 cut(s)	14
Eco88I	CYCGRG	1 cut(s)	566
EcoNI	CCTNNNNNAGG	1 cut(s)	1744
EcoRI	GAATTC	1 cut(s)	911
EcoRII	CCWGG	3 cut(s)	321, 1194, 1268
EcoRV	GATATC	1 cut(s)	1824
EcoT14I	CCWWGG	3 cut(s)	741, 1281, 1506
ErhI	CCWWGG	3 cut(s)	741, 1281, 1506
Esp3I	CGTCTC	1 cut(s)	1581
FaeI	CATG	8 cut(s)	334, 475, 598, 683, 745, 1042, 1285, 2040
FalI	AAGNNNNNCTT	2 cut(s)	12, 44
FaqI	GGGAC	2 cut(s)	403, 1701
FatI	CATG	8 cut(s)	330, 471, 594, 679, 741, 1038, 1281, 2036
FauNDI	CATATG	1 cut(s)	1068
FbaI	TGATCA	1 cut(s)	327
Fnu4HI	GCNGC	7 cut(s)	147, 336, 450, 628, 800, 1830, 2098
FokI	GGATG	5 cut(s)	68, 1055, 1142, 1216, 2090
Fsp4HI	GCNGC	7 cut(s)	147, 336, 450, 628, 800, 1830, 2098
FspBI	CTAG	4 cut(s)	183, 455, 1743, 1970
GlaI	GCGC	2 cut(s)	1055, 1366
GluI	GCNGC	7 cut(s)	147, 336, 450, 628, 800, 1830, 2098
GsaI	CCCAGC	1 cut(s)	1873
HaeIII	GGCC	5 cut(s)	627, 844, 1206, 1224, 1697
HapII	CCGG	3 cut(s)	967, 1212, 1785
HgaI	GACGC	1 cut(s)	805
HhaI	GCGC	2 cut(s)	1056, 1367
Hin1I	GRCGYC	1 cut(s)	42
Hin1II	CATG	8 cut(s)	334, 475, 598, 683, 745, 1042, 1285, 2040
Hin6I	GCGC	2 cut(s)	1054, 1365
HinP1I	GCGC	2 cut(s)	1054, 1365
HincII	GTYRAC	2 cut(s)	838, 1624
HindII	GTYRAC	2 cut(s)	838, 1624
HindIII	AAGCTT	2 cut(s)	602, 2112
HpaI	GTTAAC	1 cut(s)	838
HpaII	CCGG	3 cut(s)	967, 1212, 1785
HphI	GGTGA	4 cut(s)	337, 545, 1004, 1550
Hpy166II	GTNNAC	4 cut(s)	514, 838, 980, 1624
Hpy188III	TCNNGA	9 cut(s)	20, 92, 153, 428, 547, 680, 1217, 1606, 1970
Hpy8I	GTNNAC	4 cut(s)	514, 838, 980, 1624
Hpy99I	CGWCG	3 cut(s)	47, 1362, 1808
HpyAV	CCTTC	4 cut(s)	277, 565, 964, 2068
HpyCH4III	ACNGT	6 cut(s)	1111, 1166, 1337, 1424, 1533, 1858
HpyCH4IV	ACGT	2 cut(s)	42, 249
HpyF10VI	GCNNNNNNNGC	4 cut(s)	146, 755, 1498, 1807
HpyF3I	CTNAG	7 cut(s)	117, 204, 463, 1470, 1547, 1575, 2064
HpySE526I	ACGT	2 cut(s)	42, 249
Hsp92I	GRCGYC	1 cut(s)	42
Hsp92II	CATG	8 cut(s)	334, 475, 598, 683, 745, 1042, 1285, 2040
HspAI	GCGC	2 cut(s)	1054, 1365
Ksp22I	TGATCA	1 cut(s)	327
KspAI	GTTAAC	1 cut(s)	838
Kzo9I	GATC	7 cut(s)	25, 327, 430, 784, 1510, 1564, 2017
LmnI	GCTCC	1 cut(s)	1077
Lsp1109I	GCAGC	6 cut(s)	158, 347, 436, 786, 1841, 2109
LweI	GCATC	5 cut(s)	97, 158, 176, 786, 1033
MaeI	CTAG	4 cut(s)	183, 455, 1743, 1970
MaeII	ACGT	2 cut(s)	42, 249
MaeIII	GTNAC	7 cut(s)	559, 614, 1415, 1519, 1527, 1538, 1678
MalI	GATC	7 cut(s)	27, 329, 432, 786, 1512, 1566, 2019
MboI	GATC	7 cut(s)	25, 327, 430, 784, 1510, 1564, 2017
MfeI	CAATTG	2 cut(s)	645, 1703
MflI	RGATCY	3 cut(s)	25, 1564, 2017
MlsI	TGGCCA	1 cut(s)	1697
MluNI	TGGCCA	1 cut(s)	1697
MlyI	GAGTC	2 cut(s)	361, 1619
MmeI	TCCRAC	4 cut(s)	1084, 1770, 1899, 2045
Mox20I	TGGCCA	1 cut(s)	1697
MroXI	GAANNNNTTC	3 cut(s)	15, 1062, 1644
MscI	TGGCCA	1 cut(s)	1697
MslI	CAYNNNNRTG	2 cut(s)	214, 1234
Msp20I	TGGCCA	1 cut(s)	1697
MspA1I	CMGCKG	2 cut(s)	1832, 2100
MspCI	CTTAAG	1 cut(s)	706
MspI	CCGG	3 cut(s)	967, 1212, 1785
MspR9I	CCNGG	5 cut(s)	323, 967, 1196, 1270, 1786
MunI	CAATTG	2 cut(s)	645, 1703
Mva1269I	GAATGC	1 cut(s)	711
MvaI	CCWGG	3 cut(s)	323, 1196, 1270
MvnI	CGCG	1 cut(s)	1056
MwoI	GCNNNNNNNGC	4 cut(s)	146, 755, 1498, 1807
NciI	CCSGG	2 cut(s)	967, 1786
NcoI	CCATGG	2 cut(s)	741, 1281
NdeI	CATATG	1 cut(s)	1068
NdeII	GATC	7 cut(s)	25, 327, 430, 784, 1510, 1564, 2017
NlaIII	CATG	8 cut(s)	334, 475, 598, 683, 745, 1042, 1285, 2040
NlaIV	GGNNCC	2 cut(s)	1389, 1689
NmuCI	GTSAC	3 cut(s)	614, 1415, 1538
NspI	RCATGY	2 cut(s)	475, 2040
PagI	TCATGA	1 cut(s)	679
PaqCI	CACCTGC	2 cut(s)	329, 980
PciI	ACATGT	1 cut(s)	2036
PctI	GAATGC	1 cut(s)	711
PdmI	GAANNNNTTC	3 cut(s)	15, 1062, 1644
PfeI	GAWTC	8 cut(s)	221, 424, 459, 591, 923, 941, 1128, 1966
PfoI	TCCNGGA	1 cut(s)	965
PkrI	GCNGC	7 cut(s)	148, 337, 451, 629, 801, 1831, 2099
PleI	GAGTC	2 cut(s)	360, 1619
PpsI	GAGTC	2 cut(s)	360, 1619
PscI	ACATGT	1 cut(s)	2036
Psp1406I	AACGTT	1 cut(s)	249
Psp6I	CCWGG	3 cut(s)	321, 1194, 1268
PspFI	CCCAGC	1 cut(s)	1869
PspGI	CCWGG	3 cut(s)	321, 1194, 1268
PspN4I	GGNNCC	2 cut(s)	1389, 1689
PspPI	GGNCC	3 cut(s)	862, 1462, 1688
PstI	CTGCAG	1 cut(s)	1831
PstNI	CAGNNNCTG	1 cut(s)	2000
PsuI	RGATCY	3 cut(s)	25, 1564, 2017
PvuII	CAGCTG	1 cut(s)	1832
RsaI	GTAC	1 cut(s)	515
RsaNI	GTAC	1 cut(s)	514
RseI	CAYNNNNRTG	2 cut(s)	214, 1234
Rsr2I	CGGWCCG	1 cut(s)	862
RsrII	CGGWCCG	1 cut(s)	862
SatI	GCNGC	7 cut(s)	147, 336, 450, 628, 800, 1830, 2098
Sau3AI	GATC	7 cut(s)	25, 327, 430, 784, 1510, 1564, 2017
Sau96I	GGNCC	3 cut(s)	862, 1462, 1688
SchI	GAGTC	2 cut(s)	361, 1619
ScrFI	CCNGG	5 cut(s)	323, 967, 1196, 1270, 1786
SfaNI	GCATC	5 cut(s)	97, 158, 176, 786, 1033
SfcI	CTRYAG	2 cut(s)	189, 1827
SinI	GGWCC	3 cut(s)	862, 1462, 1688
SmiMI	CAYNNNNRTG	2 cut(s)	214, 1234
SmlI	CTYRAG	3 cut(s)	545, 706, 1796
SmoI	CTYRAG	3 cut(s)	545, 706, 1796
SsiI	CCGC	2 cut(s)	628, 2100
SspMI	CTAG	4 cut(s)	183, 455, 1743, 1970
StyD4I	CCNGG	5 cut(s)	321, 965, 1194, 1268, 1784
StyI	CCWWGG	3 cut(s)	741, 1281, 1506
TaaI	ACNGT	6 cut(s)	1111, 1166, 1337, 1424, 1533, 1858
TaiI	ACGT	2 cut(s)	45, 252
TaqI	TCGA	6 cut(s)	45, 599, 1360, 1664, 1803, 1883
TaqII	GACCGA	1 cut(s)	850
TatI	WGTACW	1 cut(s)	513
TauI	GCSGC	1 cut(s)	630
TfiI	GAWTC	8 cut(s)	221, 424, 459, 591, 923, 941, 1128, 1966
TscAI	CASTG	3 cut(s)	426, 677, 838
TseFI	GTSAC	3 cut(s)	614, 1415, 1538
TseI	GCWGC	6 cut(s)	146, 335, 449, 799, 1829, 2097
Tsp45I	GTSAC	3 cut(s)	614, 1415, 1538
TspDTI	ATGAA	6 cut(s)	583, 904, 915, 954, 1055, 1896
TspGWI	ACGGA	2 cut(s)	1364, 1828
TspRI	CASTG	3 cut(s)	426, 677, 838
Vha464I	CTTAAG	1 cut(s)	706
VpaK11BI	GGWCC	3 cut(s)	862, 1462, 1688
XagI	CCTNNNNNAGG	1 cut(s)	1744
XapI	RAATTY	5 cut(s)	34, 506, 821, 911, 1643
XbaI	TCTAGA	1 cut(s)	1969
XceI	RCATGY	2 cut(s)	475, 2040
XcmI	CCANNNNNNNNNTGG	1 cut(s)	739
XmnI	GAANNNNTTC	3 cut(s)	15, 1062, 1644
XspI	CTAG	4 cut(s)	183, 455, 1743, 1970
ZraI	GACGTC	1 cut(s)	43

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.