Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002029

Physical Location & Seq

Genomic Coordinates Forward (+)

15468945 .. 15481409

Gene Structure 12465 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g24180.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGGACACCCAAGAGGAGGAGGCTTTATTAGAAGAAGAGCTGCTCAATGTCGAGGTTGAAATTCAAACCGTCCAAGAGCAAATCAAAGTATTGCTTGACCAACAAGAGAGGTTATATGAAAGACAATCTGAACTGCAGGCTCTACTGCAAGCATCCAAAGATTCCGGATCCCCTGTTATTGGGGCTTCAACAGCTGCAGAAGACTGGTCTGGATCATTCAAGTGGGATTCTCGAGCTGATGATGTTAGGTTTAATGTATTTGGCATCTCCACATATCGTGCAAATCAGCGAGAGATTATCAATGCAGTCATGAGTGGAAGAGATGTTCTAGTCATTATGGCTGCAGGTGGTGGCAAGAGTCTCTGTTACCAGCTTCCAGCAATTCTTCGTGATGGAGTTGCTCTAGTTGTCAGCCCACTGCTTTCTTTGATTCAGGACCAGGTGATGGGCTTGGAAGCTTTAGGCATTCCAGCTCATATGCTGACATCAACTACAAGTAAGGAGGAAGAGAAGATAATATACAAGGCCCTCGAAAAGGGTGAAGGAGATTTGAAAATATTGTATGTGACGCCAGAAAAGATATCAAAGAGTAAGAGGTTTATGTCAAAACTTGAAAAGTGCCATCATGCTGGTCGTCTCTCTCTAATTTCTATTGATGAGGCACATTGTTGCAGCCAATGGGGCCATGACTTTCGACCTGATTACAAAAATCTTGGTATCCTGAAGACTCAGTTTCCCAATGTCCCTGTGATTGCTTTGACTGCAACCGCTACCCAGAAAGTCCAAAGTGATCTGATGGAGATGCTCCACATTCCAAGATGTGTGAAGTTTGTCAGCACAGTCAACAGGCCAAATCTATTCTATATGGTACGAGAGAAGTCTTCAGTTGGCAAAGTGGTGGTTGATGAAATCGCAGAATTCATTCGAGACTCTTATACAGACAAGGAATCTGGCATCGTATATTGCTTCTCTAGAAAAGAATGTGAACAGGTTGCAAAGGATTTGCGGGAGAGGGGAATATCAGCTCATCATTATCATGCAGATATGGACGTCAATGCGCGTGAAAATGTTCATATGCGGTGGAGCAAGAGCAAACTACAAGTCATCATTGGCACTGTAGCATTTGGTATGGGAATCAACAAACCTGATGTCAGGTTCGTTATCCATCACAGCCTAAGTAAATCAATGGAAACATACTACCAGGAAAGTGGCCGTGCCGGACGAGATGGACTCCCTTCTCAATGCCTGCTTTACTTTCGGCCTGCTGACATGCCTAGGCAGAGTTCAATGGTCTTCTATGAAAACTGCGGACTGCAGAACCTTTATGACATTGTACGCTATTGTCAGTCAAAAAGACAATGCCGTCGTAGCTCCTTCTTTCGTCATTTTGCTGAGCCATTACAGGACTGTAATGGGATGTGTGACAACTGTGCATTTTCAAATGAGGTTAAAGAAGTAGACGTCTCTCGTCATGCTAAGCTTATGGTTACTTTGCTGAAAGATGTGCAAGAAAATGAACAGAGGTTGACAGTGTTACAATTGGTTGATAAGATTAAGATAAAGCACAAGGAAGTAGGTTCAGAGCTGAAGCGAGAGGAAATAGAGCAGCTTGTCATTCAGCTTATATTAGGTCGAGTTCTGAAAGAAGAATTTCAGCACACAGCTTATTCCACAAATGCATATGTAACATTAGGACCTTTGGCAAAGCAGGTACTGCAAGGGAGAAGCAGTGTTAAACTTGAAATGTCTACCGGACAGAAGAAAGTAGCTGGGGTAAGATCAGTCAAACGGAGTCGTGCATCTTCATGTCTGGAACAAAAGCTTGATGAGCTGCGGAAGGAACTCTCTTCAGATCATGGAGGGATATTCCCTCATTCTGTTCTGTCTACTCAACAAATCAGCATGATAGATGACCAGAAGCCAAATTCAATGGAACAGTTGGAGAAGATCATTGGGAAAGTCAAGACGGAGAAATATGGAAGTAGAATCCTTGAACAAGTGAGTATGTATGCAGATGCAAAGCAGCCTGTTGAGGATAAAGAAGAACAAGAAACTGAAAGAAGATCCTCAAAAAGGCTAAAGAACACAGAGCCGCTTCTTATAGAGAGTAGCGATGATGAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009378 GO:0009987 GO:0016043 GO:0016462 GO:0016592 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0033554 GO:0034641 GO:0042623 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HRDC Helicase_C RQC RecQ_Zn_bind

Protein Analysis

709

Amino Acids

80.32

Weight (kDa)

6.45

Isoelectric Point (pI)

51.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	94 - 262	1e-26	DEAD/DEAH box helicase
Helicase_C	PF00271	306 - 410	9e-19	Helicase conserved C-terminal domain
RecQ_Zn_bind	PF16124	423 - 477	5e-09	RecQ zinc-binding
HRDC	PF00570	606 - 665	2.6e-07	HRDC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31360 AT1G31360 AT1G31360 AT1G31360 AT1G31360 AT1G31360 AT1G31360 AT1G31360
fragaria_vesca	FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180 FvH4_5g24180
malus_domestica	MD00G1078900.v1.1 MD11G1048700.v1.1
prunus_persica	Prupe.5G018600_v2.0.a1 Prupe.5G018600_v2.0.a1 Prupe.5G018600_v2.0.a1 Prupe.5G018600_v2.0.a1 Prupe.5G018600_v2.0.a1 Prupe.5G018600_v2.0.a1
pyrus_communis	pycom16g25560
rosa_chinensis	RchiOBHm_Chr7g0213961
rosa_laevigata	RLG00000002767
rosa_multiflora	Rmu_sc0000328.1_g000007
rosa_roxburghii	Rroxscaffold_3G00245620
rosa_rugosa	Rorug06G0229700 Rorug07G0145100
rosa_samantha	Rh7AG278100 Rh7BG271700 Rh7CG297100 Rh7DG283700
rosa_wichuraiana	Rw7G023940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	335
AasI	GACNNNNNNGTC	1 cut(s)	1362
AatII	GACGTC	2 cut(s)	1053, 1464
Acc36I	ACCTGC	2 cut(s)	335, 1699
AccB7I	CCANNNNNTGG	1 cut(s)	445
AccI	GTMKAC	3 cut(s)	1458, 1748, 1886
AccII	CGCG	1 cut(s)	1060
AccIII	TCCGGA	1 cut(s)	164
AciI	CCGC	6 cut(s)	768, 1006, 1078, 1308, 1834, 2093
AclWI	GGATC	4 cut(s)	162, 175, 220, 2058
AcoI	YGGCCR	1 cut(s)	1210
AcsI	RAATTY	4 cut(s)	60, 917, 1649, 1924
AcuI	CTGAAG	4 cut(s)	743, 867, 1607, 1833
AcyI	GRCGYC	3 cut(s)	569, 1050, 1461
AfaI	GTAC	3 cut(s)	870, 1335, 1713
AfiI	CCNNNNNNNGG	5 cut(s)	16, 179, 445, 535, 2073
AjnI	CCWGG	2 cut(s)	438, 1200
AloI	GAACNNNNNNTCC	2 cut(s)	309, 341
Alw26I	GTCTC	4 cut(s)	365, 641, 921, 1468
AlwI	GGATC	4 cut(s)	162, 175, 220, 2058
AlwNI	CAGNNNCTG	1 cut(s)	1714
Ama87I	CYCGRG	1 cut(s)	231
Aor13HI	TCCGGA	1 cut(s)	164
AoxI	GGCC	5 cut(s)	525, 682, 848, 1210, 1259
ApeKI	GCWGC	7 cut(s)	40, 194, 341, 672, 1606, 1831, 2023
ApoI	RAATTY	4 cut(s)	60, 917, 1649, 1924
ArsI	GACNNNNNNTTYG	4 cut(s)	1086, 1118, 1134, 1166
Asp700I	GAANNNNTTC	3 cut(s)	921, 1068, 1650
AspA2I	CCTAGG	1 cut(s)	1274
AspLEI	GCGC	1 cut(s)	1060
AspS9I	GGNCC	4 cut(s)	436, 526, 682, 1694
AsuHPI	GGTGA	2 cut(s)	454, 551
AvaI	CYCGRG	1 cut(s)	231
AvaII	GGWCC	2 cut(s)	436, 1694
AvrII	CCTAGG	1 cut(s)	1274
BamHI	GGATCC	1 cut(s)	167
BarI	GAAGNNNNNNTAC	2 cut(s)	503, 535
BbsI	GAAGAC	4 cut(s)	207, 731, 873, 1285
BbvI	GCAGC	7 cut(s)	27, 181, 328, 684, 1618, 1818, 2035
BccI	CCATC	6 cut(s)	386, 439, 630, 790, 1173, 1220
BceAI	ACGGC	2 cut(s)	1197, 1347
BciT130I	CCWGG	2 cut(s)	440, 1202
BciVI	GTATCC	1 cut(s)	728
BcoDI	GTCTC	4 cut(s)	365, 641, 921, 1468
BfaI	CTAG	4 cut(s)	329, 404, 972, 1275
BfmI	CTRYAG	5 cut(s)	134, 195, 342, 1116, 1313
BfuAI	ACCTGC	2 cut(s)	335, 1699
BfuI	GTATCC	1 cut(s)	728
BglI	GCCNNNNNGGC	1 cut(s)	681
BisI	GCNGC	8 cut(s)	41, 195, 342, 673, 1607, 1832, 2024, 2093
BlnI	CCTAGG	1 cut(s)	1274
BlpI	GCTNAGC	2 cut(s)	1392, 1476
BlsI	GCNGC	8 cut(s)	42, 196, 343, 674, 1608, 1833, 2025, 2094
Bme1390I	CCNGG	2 cut(s)	440, 1202
Bme18I	GGWCC	2 cut(s)	436, 1694
BmeT110I	CYCGRG	1 cut(s)	231
BmgT120I	GGNCC	4 cut(s)	436, 526, 682, 1694
BmiI	GGNNCC	2 cut(s)	169, 683
BmrFI	CCNGG	2 cut(s)	440, 1202
BmsI	GCATC	6 cut(s)	161, 273, 792, 963, 1808, 2005
BpiI	GAAGAC	4 cut(s)	207, 731, 873, 1285
BplI	GAGNNNNNCTC	2 cut(s)	1215, 1247
Bpu1102I	GCTNAGC	2 cut(s)	1392, 1476
BsaHI	GRCGYC	3 cut(s)	569, 1050, 1461
BsaJI	CCNNGG	1 cut(s)	1274
BsaWI	WCCGGW	2 cut(s)	164, 1751
BsaXI	ACNNNNNCTCC	2 cut(s)	1714, 1744
Bsc4I	CCNNNNNNNGG	5 cut(s)	16, 179, 445, 535, 2073
Bse1I	ACTGG	1 cut(s)	209
BseAI	TCCGGA	1 cut(s)	164
BseBI	CCWGG	2 cut(s)	440, 1202
BseDI	CCNNGG	1 cut(s)	1274
BseGI	GGATG	2 cut(s)	152, 1422
BseLI	CCNNNNNNNGG	5 cut(s)	16, 179, 445, 535, 2073
BseMII	CTCAG	2 cut(s)	743, 1383
BseNI	ACTGG	1 cut(s)	209
BseRI	GAGGAG	2 cut(s)	29, 32
BseXI	GCAGC	7 cut(s)	27, 181, 328, 684, 1618, 1818, 2035
BseYI	CCCAGC	1 cut(s)	1769
Bsh1236I	CGCG	1 cut(s)	1060
BshFI	GGCC	5 cut(s)	527, 684, 850, 1212, 1261
BsiHKCI	CYCGRG	1 cut(s)	231
BsiSI	CCGG	3 cut(s)	165, 1218, 1752
BslFI	GGGAC	1 cut(s)	728
BslI	CCNNNNNNNGG	5 cut(s)	16, 179, 445, 535, 2073
BsmAI	GTCTC	4 cut(s)	365, 641, 921, 1468
BsmBI	CGTCTC	2 cut(s)	641, 1468
BsmFI	GGGAC	1 cut(s)	728
BsmI	GAATGC	1 cut(s)	465
BsnI	GGCC	5 cut(s)	527, 684, 850, 1212, 1261
BsoBI	CYCGRG	1 cut(s)	231
Bsp13I	TCCGGA	1 cut(s)	164
Bsp143I	GATC	7 cut(s)	167, 212, 790, 1778, 1852, 1947, 2063
Bsp1720I	GCTNAGC	2 cut(s)	1392, 1476
BspACI	CCGC	6 cut(s)	768, 1006, 1078, 1308, 1834, 2093
BspANI	GGCC	5 cut(s)	527, 684, 850, 1212, 1261
BspCNI	CTCAG	2 cut(s)	742, 1384
BspEI	TCCGGA	1 cut(s)	164
BspFNI	CGCG	1 cut(s)	1060
BspHI	TCATGA	2 cut(s)	309, 2123
BspLI	GGNNCC	2 cut(s)	169, 683
BspMAI	CTGCAG	4 cut(s)	138, 199, 346, 1317
BspMI	ACCTGC	2 cut(s)	335, 1699
BspPI	GGATC	4 cut(s)	162, 175, 220, 2058
BspQI	GCTCTTC	1 cut(s)	30
BsrI	ACTGG	1 cut(s)	209
BssECI	CCNNGG	1 cut(s)	1274
BssMI	GATC	7 cut(s)	167, 212, 790, 1778, 1852, 1947, 2063
BssNI	GRCGYC	3 cut(s)	569, 1050, 1461
BssT1I	CCWWGG	1 cut(s)	1274
Bst2UI	CCWGG	2 cut(s)	440, 1202
Bst4CI	ACNGT	7 cut(s)	70, 841, 1117, 1409, 1430, 1531, 1938
Bst6I	CTCTTC	4 cut(s)	30, 313, 501, 1852
BstACI	GRCGYC	3 cut(s)	569, 1050, 1461
BstAPI	GCANNNNNTGC	1 cut(s)	1714
BstC8I	GCNNGC	4 cut(s)	138, 150, 1247, 1263
BstDEI	CTNAG	4 cut(s)	729, 1175, 1392, 1476
BstENI	CCTNNNNNAGG	2 cut(s)	533, 2071
BstF5I	GGATG	2 cut(s)	152, 1422
BstFNI	CGCG	1 cut(s)	1060
BstHHI	GCGC	1 cut(s)	1060
BstKTI	GATC	7 cut(s)	170, 215, 793, 1781, 1855, 1950, 2066
BstMAI	GTCTC	4 cut(s)	365, 641, 921, 1468
BstMBI	GATC	7 cut(s)	167, 212, 790, 1778, 1852, 1947, 2063
BstMWI	GCNNNNNNNGC	6 cut(s)	191, 681, 761, 1368, 1714, 1828
BstNI	CCWGG	2 cut(s)	440, 1202
BstNSI	RCATGY	1 cut(s)	1273
BstSCI	CCNGG	2 cut(s)	438, 1200
BstSFI	CTRYAG	5 cut(s)	134, 195, 342, 1116, 1313
BstUI	CGCG	1 cut(s)	1060
BstV1I	GCAGC	7 cut(s)	27, 181, 328, 684, 1618, 1818, 2035
BstV2I	GAAGAC	4 cut(s)	207, 731, 873, 1285
BstX2I	RGATCY	2 cut(s)	167, 2063
BstXI	CCANNNNNNTGG	2 cut(s)	629, 1208
BstYI	RGATCY	2 cut(s)	167, 2063
BsuI	GTATCC	1 cut(s)	728
BsuRI	GGCC	5 cut(s)	527, 684, 850, 1212, 1261
BtsCI	GGATG	2 cut(s)	152, 1422
BtsI	GCAGTG	2 cut(s)	416, 1735
BtsIMutI	CAGTG	4 cut(s)	416, 1113, 1536, 1735
BveI	ACCTGC	2 cut(s)	335, 1699
Cac8I	GCNNGC	4 cut(s)	138, 150, 1247, 1263
CaiI	CAGNNNCTG	1 cut(s)	1714
CciI	TCATGA	2 cut(s)	309, 2123
CfoI	GCGC	1 cut(s)	1060
Cfr13I	GGNCC	4 cut(s)	436, 526, 682, 1694
CseI	GACGC	1 cut(s)	577
CsiI	ACCWGGT	1 cut(s)	438
Csp6I	GTAC	3 cut(s)	869, 1334, 1712
CviQI	GTAC	3 cut(s)	869, 1334, 1712
DdeI	CTNAG	4 cut(s)	729, 1175, 1392, 1476
DpnI	GATC	7 cut(s)	169, 214, 792, 1780, 1854, 1949, 2065
DpnII	GATC	7 cut(s)	167, 212, 790, 1778, 1852, 1947, 2063
DrdI	GACNNNNNNGTC	1 cut(s)	1362
DseDI	GACNNNNNNGTC	1 cut(s)	1362
EaeI	YGGCCR	1 cut(s)	1210
Eam1104I	CTCTTC	4 cut(s)	30, 313, 501, 1852
EarI	CTCTTC	4 cut(s)	30, 313, 501, 1852
Eco130I	CCWWGG	1 cut(s)	1274
Eco32I	GATATC	1 cut(s)	582
Eco47I	GGWCC	2 cut(s)	436, 1694
Eco57I	CTGAAG	4 cut(s)	743, 867, 1607, 1833
Eco88I	CYCGRG	1 cut(s)	231
EcoNI	CCTNNNNNAGG	2 cut(s)	533, 2071
EcoO109I	RGGNCCY	2 cut(s)	526, 1694
EcoRI	GAATTC	1 cut(s)	917
EcoRII	CCWGG	2 cut(s)	438, 1200
EcoRV	GATATC	1 cut(s)	582
EcoT14I	CCWWGG	1 cut(s)	1274
EcoT22I	ATGCAT	1 cut(s)	1681
ErhI	CCWWGG	1 cut(s)	1274
Esp3I	CGTCTC	2 cut(s)	641, 1468
FalI	AAGNNNNNCTT	2 cut(s)	78, 110
FaqI	GGGAC	1 cut(s)	728
FauI	CCCGC	1 cut(s)	999
FauNDI	CATATG	3 cut(s)	477, 1074, 1681
FblI	GTMKAC	3 cut(s)	1458, 1748, 1886
Fnu4HI	GCNGC	8 cut(s)	41, 195, 342, 673, 1607, 1832, 2024, 2093
FokI	GGATG	2 cut(s)	139, 1429
Fsp4HI	GCNGC	8 cut(s)	41, 195, 342, 673, 1607, 1832, 2024, 2093
FspBI	CTAG	4 cut(s)	329, 404, 972, 1275
GlaI	GCGC	1 cut(s)	1059
GluI	GCNGC	8 cut(s)	41, 195, 342, 673, 1607, 1832, 2024, 2093
GsaI	CCCAGC	1 cut(s)	1773
HaeIII	GGCC	5 cut(s)	527, 684, 850, 1212, 1261
HapII	CCGG	3 cut(s)	165, 1218, 1752
HgaI	GACGC	1 cut(s)	577
HhaI	GCGC	1 cut(s)	1060
Hin1I	GRCGYC	3 cut(s)	569, 1050, 1461
Hin6I	GCGC	1 cut(s)	1058
HinP1I	GCGC	1 cut(s)	1058
HincII	GTYRAC	2 cut(s)	844, 1527
HindII	GTYRAC	2 cut(s)	844, 1527
HindIII	AAGCTT	3 cut(s)	456, 1478, 1820
HpaII	CCGG	3 cut(s)	165, 1218, 1752
HphI	GGTGA	2 cut(s)	454, 551
Hpy166II	GTNNAC	6 cut(s)	844, 986, 1459, 1527, 1749, 1887
Hpy188I	TCNGA	5 cut(s)	130, 795, 1582, 1641, 1852
Hpy8I	GTNNAC	6 cut(s)	844, 986, 1459, 1527, 1749, 1887
Hpy99I	CGWCG	1 cut(s)	1368
HpyAV	CCTTC	4 cut(s)	536, 1245, 1384, 1831
HpyCH4III	ACNGT	7 cut(s)	70, 841, 1117, 1409, 1430, 1531, 1938
HpyCH4IV	ACGT	2 cut(s)	1050, 1461
HpyF10VI	GCNNNNNNNGC	6 cut(s)	191, 681, 761, 1368, 1714, 1828
HpyF3I	CTNAG	4 cut(s)	729, 1175, 1392, 1476
HpySE526I	ACGT	2 cut(s)	1050, 1461
Hsp92I	GRCGYC	3 cut(s)	569, 1050, 1461
HspAI	GCGC	1 cut(s)	1058
Kpn2I	TCCGGA	1 cut(s)	164
Kzo9I	GATC	7 cut(s)	167, 212, 790, 1778, 1852, 1947, 2063
LguI	GCTCTTC	1 cut(s)	30
LmnI	GCTCC	3 cut(s)	810, 1083, 1376
Lsp1109I	GCAGC	7 cut(s)	27, 181, 328, 684, 1618, 1818, 2035
LweI	GCATC	6 cut(s)	161, 273, 792, 963, 1808, 2005
MabI	ACCWGGT	1 cut(s)	438
MaeI	CTAG	4 cut(s)	329, 404, 972, 1275
MaeII	ACGT	2 cut(s)	1050, 1461
MaeIII	GTNAC	6 cut(s)	365, 565, 1421, 1486, 1533, 1684
MalI	GATC	7 cut(s)	169, 214, 792, 1780, 1854, 1949, 2065
MboI	GATC	7 cut(s)	167, 212, 790, 1778, 1852, 1947, 2063
MfeI	CAATTG	1 cut(s)	1538
MflI	RGATCY	2 cut(s)	167, 2063
MluCI	AATT	7 cut(s)	60, 381, 645, 917, 1538, 1649, 1924
MlyI	GAGTC	5 cut(s)	367, 721, 923, 1224, 1801
MmeI	TCCRAC	1 cut(s)	1920
Mph1103I	ATGCAT	1 cut(s)	1681
MroI	TCCGGA	1 cut(s)	164
MroXI	GAANNNNTTC	3 cut(s)	921, 1068, 1650
MseI	TTAA	4 cut(s)	252, 1449, 1554, 1734
MslI	CAYNNNNRTG	3 cut(s)	220, 1035, 1804
MspA1I	CMGCKG	1 cut(s)	194
MspI	CCGG	3 cut(s)	165, 1218, 1752
MspR9I	CCNGG	2 cut(s)	440, 1202
MunI	CAATTG	1 cut(s)	1538
Mva1269I	GAATGC	1 cut(s)	465
MvaI	CCWGG	2 cut(s)	440, 1202
MvnI	CGCG	1 cut(s)	1060
MwoI	GCNNNNNNNGC	6 cut(s)	191, 681, 761, 1368, 1714, 1828
NdeI	CATATG	3 cut(s)	477, 1074, 1681
NdeII	GATC	7 cut(s)	167, 212, 790, 1778, 1852, 1947, 2063
NlaIV	GGNNCC	2 cut(s)	169, 683
NmuCI	GTSAC	2 cut(s)	565, 1421
NsiI	ATGCAT	1 cut(s)	1681
NspI	RCATGY	1 cut(s)	1273
PaeR7I	CTCGAG	1 cut(s)	231
PagI	TCATGA	2 cut(s)	309, 2123
PaqCI	CACCTGC	1 cut(s)	335
PciSI	GCTCTTC	1 cut(s)	30
PctI	GAATGC	1 cut(s)	465
PdmI	GAANNNNTTC	3 cut(s)	921, 1068, 1650
PfeI	GAWTC	7 cut(s)	161, 227, 430, 947, 1134, 1986, 2120
PflMI	CCANNNNNTGG	1 cut(s)	445
PkrI	GCNGC	8 cut(s)	42, 196, 343, 674, 1608, 1833, 2025, 2094
PleI	GAGTC	5 cut(s)	366, 721, 923, 1224, 1800
PpsI	GAGTC	5 cut(s)	366, 721, 923, 1224, 1800
PpuMI	RGGWCCY	1 cut(s)	1694
Psp5II	RGGWCCY	1 cut(s)	1694
Psp6I	CCWGG	2 cut(s)	438, 1200
PspFI	CCCAGC	1 cut(s)	1769
PspGI	CCWGG	2 cut(s)	438, 1200
PspN4I	GGNNCC	2 cut(s)	169, 683
PspPI	GGNCC	4 cut(s)	436, 526, 682, 1694
PspPPI	RGGWCCY	1 cut(s)	1694
PstI	CTGCAG	4 cut(s)	138, 199, 346, 1317
PstNI	CAGNNNCTG	1 cut(s)	1714
PsuI	RGATCY	2 cut(s)	167, 2063
PvuII	CAGCTG	1 cut(s)	194
RsaI	GTAC	3 cut(s)	870, 1335, 1713
RsaNI	GTAC	3 cut(s)	869, 1334, 1712
RseI	CAYNNNNRTG	3 cut(s)	220, 1035, 1804
SapI	GCTCTTC	1 cut(s)	30
SaqAI	TTAA	4 cut(s)	252, 1449, 1554, 1734
SatI	GCNGC	8 cut(s)	41, 195, 342, 673, 1607, 1832, 2024, 2093
Sau3AI	GATC	7 cut(s)	167, 212, 790, 1778, 1852, 1947, 2063
Sau96I	GGNCC	4 cut(s)	436, 526, 682, 1694
SchI	GAGTC	5 cut(s)	367, 721, 923, 1224, 1801
ScrFI	CCNGG	2 cut(s)	440, 1202
SexAI	ACCWGGT	1 cut(s)	438
SfaNI	GCATC	6 cut(s)	161, 273, 792, 963, 1808, 2005
SfcI	CTRYAG	5 cut(s)	134, 195, 342, 1116, 1313
Sfr274I	CTCGAG	1 cut(s)	231
SinI	GGWCC	2 cut(s)	436, 1694
SlaI	CTCGAG	1 cut(s)	231
SmiMI	CAYNNNNRTG	3 cut(s)	220, 1035, 1804
SmlI	CTYRAG	1 cut(s)	231
SmoI	CTYRAG	1 cut(s)	231
Sse9I	AATT	7 cut(s)	60, 381, 645, 917, 1538, 1649, 1924
SsiI	CCGC	6 cut(s)	768, 1006, 1078, 1308, 1834, 2093
SspI	AATATT	1 cut(s)	558
SspMI	CTAG	4 cut(s)	329, 404, 972, 1275
StyD4I	CCNGG	2 cut(s)	438, 1200
StyI	CCWWGG	1 cut(s)	1274
TaaI	ACNGT	7 cut(s)	70, 841, 1117, 1409, 1430, 1531, 1938
TaiI	ACGT	2 cut(s)	1053, 1464
TaqI	TCGA	6 cut(s)	51, 232, 531, 694, 925, 1633
TasI	AATT	7 cut(s)	60, 381, 645, 917, 1538, 1649, 1924
TauI	GCSGC	1 cut(s)	2095
TfiI	GAWTC	7 cut(s)	161, 227, 430, 947, 1134, 1986, 2120
Tru1I	TTAA	4 cut(s)	252, 1449, 1554, 1734
Tru9I	TTAA	4 cut(s)	252, 1449, 1554, 1734
TscAI	CASTG	4 cut(s)	423, 1120, 1536, 1735
TseFI	GTSAC	2 cut(s)	565, 1421
TseI	GCWGC	7 cut(s)	40, 194, 341, 672, 1606, 1831, 2023
Tsp45I	GTSAC	2 cut(s)	565, 1421
TspDTI	ATGAA	7 cut(s)	132, 910, 921, 1061, 1314, 1530, 1794
TspGWI	ACGGA	2 cut(s)	1804, 1982
TspRI	CASTG	4 cut(s)	423, 1120, 1536, 1735
Van91I	CCANNNNNTGG	1 cut(s)	445
VpaK11BI	GGWCC	2 cut(s)	436, 1694
XagI	CCTNNNNNAGG	2 cut(s)	533, 2071
XapI	RAATTY	4 cut(s)	60, 917, 1649, 1924
XbaI	TCTAGA	1 cut(s)	971
XceI	RCATGY	1 cut(s)	1273
XhoI	CTCGAG	1 cut(s)	231
XmaJI	CCTAGG	1 cut(s)	1274
XmiI	GTMKAC	3 cut(s)	1458, 1748, 1886
XmnI	GAANNNNTTC	3 cut(s)	921, 1068, 1650
XspI	CTAG	4 cut(s)	329, 404, 972, 1275
ZraI	GACGTC	2 cut(s)	1051, 1462
Zsp2I	ATGCAT	1 cut(s)	1681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.