AT1G31780

Conserved oligomeric complex COG6 (InterPro IPR010490)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011878
Physical Location & Seq
Forward (+)
11391199 .. 11394748
3550 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G31780.1

Sequence Viewer

Length: 2043 bp
ATGGCTTCGACGGTGGGATTAGCACCGGGGCTCTCCCGGAAATTGAAGAAGGTATTGGATTGTCGTACAGATAGTCCGGATCTGGTGGCGTCGCTTAACGCTTTATCCTCATTCTACGACGAGAACAGTGCTCACGCACGGAGAAATCTCAGATCGACGATCGAGAAACGAGCGCTTCAGATCAACAGTGAGTTCCTTAACGCGGCTGATTCGACTCAGATCGCATTGGATCGCGTGGAGGAGGAAGTGAATGCTTTAGCTGATTGTTGCGATAAGATTGCGGCGGCGCTAAGTAGTTCCGCGGCTACCACTAGCGATATTATTAGTACTACTGAGAGGCTAAAGCAAGAGCTTGAGGTTACTACTCAGAGGCAAGAGATCGTTAACTGTTTTCTTCGTGATTACCAGCTTTCGAATGAAGAGATTAAAGCGCTTAGGGAAGATGAATTGAATGAGAATTTCTTCCAAGCGTTGTCTCATGTTCAGGAAATTCATTCCAATTGCAAATTACTTCTTAGGACGCATCATCAGCGTGCGGGTTTGGAATTGATGGATATGATGGCTGTGTATCAAGAAGGAGCATATGAGCGCCTTTGCAGGTGGGTTCAGGCTGAGTGTAGGAAACTCGGTGATACGGATAATCCAGAGGTGAGTGAGCTTTTGAGGACTGCTGTTCGTTGTCTCAAAGAAAGACCCGTTCTCTTCAAATATTGTGCAGAGGAGGTAGGGAATCTGAGGCACAATGCGTTATTTAGAAGATTTATTAGCGCTCTTACACGTGGAGGGCCTGGAGGAATGCCTAGACCCATTGAAGTTCATGCCCATGACCCCTTAAGATACGTGGGAGACATGCTTGGGTGGCTACATCAGGCTTTGGCATCAGAAAGAGAATTGGTTCATGCTTTATTTGATATAGACTCAGCTGACCATCAATCAAACGCAAAAAATACCTCTGAGAATATTGCCCTAAAGGCAGGAGAATCTGACTTTACATTTGTTCTGGATAGAATTTTTGAAGGAGTTTGCCGTCCATTTAAAGTGAGAGTCGAACAAGTTCTGCAGTCACAACCAAGTCTTATTATTTCTTACAAACTCACCAACACCTTGGAGTTCTACAGCTACACTATCTCAGATTTACTTGGGCGAGACACTGCACTGTGTAATACAATTGGAATGGTAAAGGATGCTGCACAGAAAACCTTCTTTGACATTCTTAAAACCCGAGGAGAGAAACTTCTACGATACCCTCCACCTGTAGCCGTTGATCTCTCTCCTCCTCCAGCTGTCCGAGAAGGAGTTTCTCTTACTCTTGAGATTATCGAGAATTACAACAGTATGATGGTTTCTGCTTCAGGAGAGAAACCGGCTTTTGATCCCGTCCTCTCTGCACTGCTTGACCCTATTATTAAGATGTGCGAGCAAGCAGCAGAGGCGCATAAATCAAAGAAGAGCGGCCAATTACCCAGAAGAAGCAGAACAAGTTCTGACTCAAGCCAGTTAACCTCAGTCGATGCTCTACTCTCTAGCAGCCCATCCCCACCACAGAACAACGAAACACCCTCAAAAATATTCCTCATCAACTGTTTATGCGCGATCCAACAACCATTGCTAAGACACGATGTTGCGTCCCAATACGTAACCAACATTGGATTAATGATCGAGAACCACATAAACCTCCTCGTCCAGAATGAAGTTGACACACTACTCCACAAATGCGGTCTTTCAGACAAAATGCAAATCTTCCGCTCTTCCACATCCGAACTTCCCTTATCTGAACGACAAGACACTTCACCCGCGATGCTATCCGAATGCCTCAAGGCATTCTTCGGCCTCGTTTTGGGAAGCGAAGGCTCTCTTCCTGAGTTTGAGCAGATACAGGTCCCTAAACTCAGGTCTGAAGCTTGTGTCAGGGTCGCTAAAACTTTAGCTGAAGCTTACGAAGTTATATACCAAGCTGTAACAGATCAACAAAATGGATATCCAGATCCAAAGTCTCTCGCCCGACATCCACCAGATCAGATCCGAACGATTCTTGGTATATGA

Protein Analysis

680

Amino Acids

75.79

Weight (kDa)

5.64

Isoelectric Point (pI)

52.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COG6_N PF06419 35 - 147 2.1e-29 Conserved oligomeric complex COG6, N-terminal
COG6_C PF20653 177 - 678 1.2e-150 Conserved Oligomeric Golgi complex subunit 6, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011878)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31780
fragaria_vesca FvH4_2g37280 FvH4_2g37280
malus_domestica MD13G1243800.v1.1 MD13G1243900.v1.1 MD13G1244000.v1.1
prunus_persica Prupe.1G077200_v2.0.a1
pyrus_communis pycom13g21520 pycom16g21010
rosa_chinensis RchiOBHm_Chr6g0304421
rosa_laevigata RLG00000010980
rosa_multiflora Rmu_ssc0000218.1_g000049
rosa_roxburghii Rroxscaffold_7G00163750
rosa_rugosa Rorug06G0331400
rosa_samantha Rh6AG444300 Rh6BG458100 Rh6CG457100 Rh6DG443800
rosa_wichuraiana Rw6G038570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 588
Acc36I ACCTGC 1 cut(s) 588
AccBSI CCGCTC 2 cut(s) 1452, 1746
AccII CGCG 5 cut(s) 203, 234, 302, 1592, 1796
AccIII TCCGGA 1 cut(s) 76
AclWI GGATC 6 cut(s) 87, 237, 1367, 1588, 1979, 2014
AcoI YGGCCR 1 cut(s) 1453
AcsI RAATTY 3 cut(s) 457, 489, 1008
AcuI CTGAAG 4 cut(s) 161, 1335, 1917, 1950
AcvI CACGTG 1 cut(s) 779
AcyI GRCGYC 1 cut(s) 89
AfaI GTAC 2 cut(s) 67, 328
AfeI AGCGCT 3 cut(s) 174, 432, 769
AfiI CCNNNNNNNGG 2 cut(s) 202, 1837
AflII CTTAAG 1 cut(s) 832
AflIII ACRYGT 1 cut(s) 776
AgsI TTSAA 5 cut(s) 46, 451, 706, 812, 1016
AjnI CCWGG 1 cut(s) 787
AjuI GAANNNNNNNTTGG 2 cut(s) 38, 70
Alw21I GWGCWC 1 cut(s) 133
Alw26I GTCTC 5 cut(s) 480, 686, 840, 1140, 1998
AlwI GGATC 6 cut(s) 87, 237, 1367, 1588, 1979, 2014
Ama87I CYCGRG 1 cut(s) 1221
Aor13HI TCCGGA 1 cut(s) 76
Aor51HI AGCGCT 3 cut(s) 174, 432, 769
AoxI GGCC 3 cut(s) 785, 1453, 1828
ApeKI GCWGC 3 cut(s) 1187, 1424, 1527
ApoI RAATTY 3 cut(s) 457, 489, 1008
ArsI GACNNNNNNTTYG 2 cut(s) 977, 1009
AseI ATTAAT 1 cut(s) 1652
Asp700I GAANNNNTTC 5 cut(s) 461, 894, 1053, 1199, 1480
AspLEI GCGC 7 cut(s) 175, 289, 433, 591, 770, 1435, 1592
AspS9I GGNCC 2 cut(s) 785, 1879
AsuC2I CCSGG 2 cut(s) 27, 37
AsuHPI GGTGA 4 cut(s) 641, 661, 1087, 1782
AsuII TTCGAA 1 cut(s) 413
AvaI CYCGRG 1 cut(s) 1221
AvaII GGWCC 1 cut(s) 1879
BanII GRGCYC 1 cut(s) 33
BbrPI CACGTG 1 cut(s) 779
Bbv12I GWGCWC 1 cut(s) 133
BbvI GCAGC 3 cut(s) 1174, 1436, 1539
BccI CCATC 5 cut(s) 544, 553, 936, 1333, 1540
BceAI ACGGC 2 cut(s) 1011, 1244
BcgI CGANNNNNNTGC 4 cut(s) 110, 144, 260, 294
BciT130I CCWGG 1 cut(s) 789
BcnI CCSGG 2 cut(s) 27, 37
BcoDI GTCTC 5 cut(s) 480, 686, 840, 1140, 1998
BfaI CTAG 3 cut(s) 312, 801, 1524
BfmI CTRYAG 3 cut(s) 1058, 1114, 1254
BfoI RGCGCY 5 cut(s) 176, 290, 434, 592, 771
BfrI CTTAAG 1 cut(s) 832
BfuAI ACCTGC 1 cut(s) 588
BglI GCCNNNNNGGC 1 cut(s) 971
BisI GCNGC 8 cut(s) 204, 282, 285, 303, 1188, 1425, 1453, 1528
BlsI GCNGC 8 cut(s) 205, 283, 286, 304, 1189, 1426, 1454, 1529
BmcAI AGTACT 1 cut(s) 328
Bme1390I CCNGG 3 cut(s) 27, 37, 789
Bme18I GGWCC 1 cut(s) 1879
BmeT110I CYCGRG 1 cut(s) 1221
BmgT120I GGNCC 2 cut(s) 785, 1879
BmiI GGNNCC 1 cut(s) 1881
BmrFI CCNGG 3 cut(s) 27, 37, 789
BmsI GCATC 5 cut(s) 532, 887, 1174, 1501, 1788
BpmI CTGGAG 2 cut(s) 810, 1263
Bpu10I CCTNAGC 1 cut(s) 434
Bpu14I TTCGAA 1 cut(s) 413
BpuEI CTTGAG 4 cut(s) 374, 1331, 1474, 1799
BpuMI CCSGG 2 cut(s) 27, 37
BsaAI YACGTR 3 cut(s) 779, 841, 1636
BsaHI GRCGYC 1 cut(s) 89
BsaJI CCNNGG 4 cut(s) 26, 300, 1104, 1222
BsaWI WCCGGW 1 cut(s) 76
Bsc4I CCNNNNNNNGG 2 cut(s) 202, 1837
Bse118I RCCGGY 1 cut(s) 1363
Bse1I ACTGG 1 cut(s) 1495
Bse3DI GCAATG 1 cut(s) 1604
BseAI TCCGGA 1 cut(s) 76
BseBI CCWGG 1 cut(s) 789
BseDI CCNNGG 4 cut(s) 26, 300, 1104, 1222
BseGI GGATG 4 cut(s) 1189, 1532, 1754, 2005
BseLI CCNNNNNNNGG 2 cut(s) 202, 1837
BseMI GCAATG 1 cut(s) 1604
BseNI ACTGG 1 cut(s) 1495
BseRI GAGGAG 6 cut(s) 254, 734, 1239, 1263, 1266, 1667
BseXI GCAGC 3 cut(s) 1174, 1436, 1539
BsgI GTGCAG 4 cut(s) 735, 1137, 1173, 1371
Bsh1236I CGCG 5 cut(s) 203, 234, 302, 1592, 1796
Bsh1285I CGRYCG 1 cut(s) 162
BshFI GGCC 3 cut(s) 787, 1455, 1830
BsiEI CGRYCG 1 cut(s) 162
BsiHKAI GWGCWC 1 cut(s) 133
BsiHKCI CYCGRG 1 cut(s) 1221
BsiSI CCGG 4 cut(s) 26, 37, 77, 1364
BslFI GGGAC 2 cut(s) 1612, 1865
BslI CCNNNNNNNGG 2 cut(s) 202, 1837
BsmAI GTCTC 5 cut(s) 480, 686, 840, 1140, 1998
BsmFI GGGAC 2 cut(s) 1612, 1865
BsmI GAATGC 4 cut(s) 256, 801, 1814, 1820
BsnI GGCC 3 cut(s) 787, 1455, 1830
BsoBI CYCGRG 1 cut(s) 1221
Bsp119I TTCGAA 1 cut(s) 413
Bsp1286I GDGCHC 2 cut(s) 33, 133
Bsp13I TCCGGA 1 cut(s) 76
BspANI GGCC 3 cut(s) 787, 1455, 1830
BspEI TCCGGA 1 cut(s) 76
BspFNI CGCG 5 cut(s) 203, 234, 302, 1592, 1796
BspLI GGNNCC 1 cut(s) 1881
BspMAI CTGCAG 1 cut(s) 1062
BspMI ACCTGC 1 cut(s) 588
BspPI GGATC 6 cut(s) 87, 237, 1367, 1588, 1979, 2014
BspQI GCTCTTC 2 cut(s) 1442, 1753
BspT104I TTCGAA 1 cut(s) 413
BspTI CTTAAG 1 cut(s) 832
BsrBI CCGCTC 2 cut(s) 1452, 1746
BsrDI GCAATG 1 cut(s) 1604
BsrFI RCCGGY 1 cut(s) 1363
BsrI ACTGG 1 cut(s) 1495
BssAI RCCGGY 1 cut(s) 1363
BssECI CCNNGG 4 cut(s) 26, 300, 1104, 1222
BssNI GRCGYC 1 cut(s) 89
BssT1I CCWWGG 1 cut(s) 1104
Bst2UI CCWGG 1 cut(s) 789
Bst4CI ACNGT 7 cut(s) 13, 128, 188, 389, 1158, 1334, 1583
Bst6I CTCTTC 5 cut(s) 414, 707, 1442, 1753, 1860
BstACI GRCGYC 1 cut(s) 89
BstAFI CTTAAG 1 cut(s) 832
BstBAI YACGTR 3 cut(s) 779, 841, 1636
BstBI TTCGAA 1 cut(s) 413
BstC8I GCNNGC 3 cut(s) 534, 1418, 1422
BstDSI CCRYGG 1 cut(s) 300
BstF5I GGATG 4 cut(s) 1189, 1532, 1754, 2005
BstFNI CGCG 5 cut(s) 203, 234, 302, 1592, 1796
BstH2I RGCGCY 5 cut(s) 176, 290, 434, 592, 771
BstHHI GCGC 7 cut(s) 175, 289, 433, 591, 770, 1435, 1592
BstMAI GTCTC 5 cut(s) 480, 686, 840, 1140, 1998
BstMCI CGRYCG 1 cut(s) 162
BstMWI GCNNNNNNNGC 4 cut(s) 529, 859, 971, 1430
BstNI CCWGG 1 cut(s) 789
BstNSI RCATGY 1 cut(s) 853
BstSCI CCNGG 3 cut(s) 25, 35, 787
BstSFI CTRYAG 3 cut(s) 1058, 1114, 1254
BstSNI TACGTA 1 cut(s) 1636
BstUI CGCG 5 cut(s) 203, 234, 302, 1592, 1796
BstV1I GCAGC 3 cut(s) 1174, 1436, 1539
BstX2I RGATCY 3 cut(s) 79, 1984, 2019
BstXI CCANNNNNNTGG 1 cut(s) 1105
BstYI RGATCY 3 cut(s) 79, 1984, 2019
BsuRI GGCC 3 cut(s) 787, 1455, 1830
BtgI CCRYGG 1 cut(s) 300
BtgZI GCGATG 1 cut(s) 1811
BtsCI GGATG 4 cut(s) 1189, 1532, 1754, 2005
BtsI GCAGTG 2 cut(s) 1149, 1388
BtsIMutI CAGTG 5 cut(s) 133, 193, 1149, 1154, 1388
BveI ACCTGC 1 cut(s) 588
Cac8I GCNNGC 3 cut(s) 534, 1418, 1422
CfoI GCGC 7 cut(s) 175, 289, 433, 591, 770, 1435, 1592
Cfr10I RCCGGY 1 cut(s) 1363
Cfr13I GGNCC 2 cut(s) 785, 1879
Cfr42I CCGCGG 1 cut(s) 303
CseI GACGC 3 cut(s) 78, 529, 1614
Csp6I GTAC 2 cut(s) 66, 327
CviAII CATG 5 cut(s) 479, 818, 824, 850, 899
CviQI GTAC 2 cut(s) 66, 327
DraI TTTAAA 1 cut(s) 1036
EaeI YGGCCR 1 cut(s) 1453
Eam1104I CTCTTC 5 cut(s) 414, 707, 1442, 1753, 1860
EarI CTCTTC 5 cut(s) 414, 707, 1442, 1753, 1860
Eco105I TACGTA 1 cut(s) 1636
Eco130I CCWWGG 1 cut(s) 1104
Eco24I GRGCYC 1 cut(s) 33
Eco32I GATATC 1 cut(s) 1979
Eco47I GGWCC 1 cut(s) 1879
Eco47III AGCGCT 3 cut(s) 174, 432, 769
Eco57I CTGAAG 4 cut(s) 161, 1335, 1917, 1950
Eco72I CACGTG 1 cut(s) 779
Eco88I CYCGRG 1 cut(s) 1221
EcoO109I RGGNCCY 2 cut(s) 785, 1879
EcoRII CCWGG 1 cut(s) 787
EcoRV GATATC 1 cut(s) 1979
EcoT14I CCWWGG 1 cut(s) 1104
EcoT38I GRGCYC 1 cut(s) 33
ErhI CCWWGG 1 cut(s) 1104
FaeI CATG 5 cut(s) 482, 821, 827, 853, 902
FalI AAGNNNNNCTT 4 cut(s) 1808, 1840, 1839, 1871
FaqI GGGAC 2 cut(s) 1612, 1865
FatI CATG 5 cut(s) 478, 817, 823, 849, 898
FauI CCCGC 2 cut(s) 529, 1801
FauNDI CATATG 1 cut(s) 583
Fnu4HI GCNGC 8 cut(s) 204, 282, 285, 303, 1188, 1425, 1453, 1528
FokI GGATG 4 cut(s) 1196, 1519, 1741, 1992
FriOI GRGCYC 1 cut(s) 33
Fsp4HI GCNGC 8 cut(s) 204, 282, 285, 303, 1188, 1425, 1453, 1528
FspBI CTAG 3 cut(s) 312, 801, 1524
GlaI GCGC 7 cut(s) 174, 288, 432, 590, 769, 1434, 1591
GluI GCNGC 8 cut(s) 204, 282, 285, 303, 1188, 1425, 1453, 1528
GsuI CTGGAG 2 cut(s) 810, 1263
HaeII RGCGCY 5 cut(s) 176, 290, 434, 592, 771
HaeIII GGCC 3 cut(s) 787, 1455, 1830
HapII CCGG 4 cut(s) 26, 37, 77, 1364
HgaI GACGC 3 cut(s) 78, 529, 1614
HhaI GCGC 7 cut(s) 175, 289, 433, 591, 770, 1435, 1592
Hin1I GRCGYC 1 cut(s) 89
Hin1II CATG 5 cut(s) 482, 821, 827, 853, 902
Hin6I GCGC 7 cut(s) 173, 287, 431, 589, 768, 1433, 1590
HinP1I GCGC 7 cut(s) 173, 287, 431, 589, 768, 1433, 1590
HincII GTYRAC 3 cut(s) 385, 1500, 1696
HindII GTYRAC 3 cut(s) 385, 1500, 1696
HindIII AAGCTT 2 cut(s) 1899, 1932
HinfI GANTC 8 cut(s) 209, 214, 730, 917, 980, 1044, 1487, 2029
HpaI GTTAAC 2 cut(s) 385, 1500
HpaII CCGG 4 cut(s) 26, 37, 77, 1364
HphI GGTGA 4 cut(s) 641, 661, 1087, 1782
Hpy166II GTNNAC 3 cut(s) 385, 1500, 1696
Hpy8I GTNNAC 3 cut(s) 385, 1500, 1696
Hpy99I CGWCG 4 cut(s) 13, 94, 122, 160
HpyAV CCTTC 6 cut(s) 43, 569, 1010, 1210, 1286, 1841
HpyCH4III ACNGT 7 cut(s) 13, 128, 188, 389, 1158, 1334, 1583
HpyCH4IV ACGT 3 cut(s) 778, 840, 1635
HpyCH4V TGCA 8 cut(s) 504, 597, 716, 1060, 1154, 1190, 1388, 1735
HpyF10VI GCNNNNNNNGC 4 cut(s) 529, 859, 971, 1430
HpySE526I ACGT 3 cut(s) 778, 840, 1635
Hsp92I GRCGYC 1 cut(s) 89
Hsp92II CATG 5 cut(s) 482, 821, 827, 853, 902
HspAI GCGC 7 cut(s) 173, 287, 431, 589, 768, 1433, 1590
Kpn2I TCCGGA 1 cut(s) 76
KspAI GTTAAC 2 cut(s) 385, 1500
KspI CCGCGG 1 cut(s) 303
LguI GCTCTTC 2 cut(s) 1442, 1753
LmnI GCTCC 1 cut(s) 578
Lsp1109I GCAGC 3 cut(s) 1174, 1436, 1539
LweI GCATC 5 cut(s) 532, 887, 1174, 1501, 1788
MaeI CTAG 3 cut(s) 312, 801, 1524
MaeII ACGT 3 cut(s) 778, 840, 1635
MaeIII GTNAC 4 cut(s) 358, 1062, 1636, 1957
MbiI CCGCTC 2 cut(s) 1452, 1746
MfeI CAATTG 2 cut(s) 499, 1167
MflI RGATCY 3 cut(s) 79, 1984, 2019
MhlI GDGCHC 2 cut(s) 33, 133
MlyI GAGTC 4 cut(s) 208, 911, 1053, 1481
MmeI TCCRAC 1 cut(s) 1621
MroI TCCGGA 1 cut(s) 76
MroXI GAANNNNTTC 5 cut(s) 461, 894, 1053, 1199, 1480
MslI CAYNNNNRTG 2 cut(s) 531, 822
MspA1I CMGCKG 3 cut(s) 302, 923, 1283
MspCI CTTAAG 1 cut(s) 832
MspI CCGG 4 cut(s) 26, 37, 77, 1364
MspR9I CCNGG 3 cut(s) 27, 37, 789
MunI CAATTG 2 cut(s) 499, 1167
Mva1269I GAATGC 4 cut(s) 256, 801, 1814, 1820
MvaI CCWGG 1 cut(s) 789
MvnI CGCG 5 cut(s) 203, 234, 302, 1592, 1796
MwoI GCNNNNNNNGC 4 cut(s) 529, 859, 971, 1430
NciI CCSGG 2 cut(s) 27, 37
NdeI CATATG 1 cut(s) 583
NlaIII CATG 5 cut(s) 482, 821, 827, 853, 902
NlaIV GGNNCC 1 cut(s) 1881
NmuCI GTSAC 1 cut(s) 1062
NspI RCATGY 1 cut(s) 853
NspV TTCGAA 1 cut(s) 413
PaqCI CACCTGC 1 cut(s) 588
PciSI GCTCTTC 2 cut(s) 1442, 1753
PctI GAATGC 4 cut(s) 256, 801, 1814, 1820
PdmI GAANNNNTTC 5 cut(s) 461, 894, 1053, 1199, 1480
PfeI GAWTC 4 cut(s) 209, 730, 980, 2029
PfoI TCCNGGA 1 cut(s) 35
PkrI GCNGC 8 cut(s) 205, 283, 286, 304, 1189, 1426, 1454, 1529
Ple19I CGATCG 1 cut(s) 162
PleI GAGTC 4 cut(s) 208, 911, 1052, 1481
PmaCI CACGTG 1 cut(s) 779
PmlI CACGTG 1 cut(s) 779
PpsI GAGTC 4 cut(s) 208, 911, 1052, 1481
Ppu21I YACGTR 3 cut(s) 779, 841, 1636
PpuMI RGGWCCY 1 cut(s) 1879
PshBI ATTAAT 1 cut(s) 1652
Psp5II RGGWCCY 1 cut(s) 1879
Psp6I CCWGG 1 cut(s) 787
PspCI CACGTG 1 cut(s) 779
PspGI CCWGG 1 cut(s) 787
PspN4I GGNNCC 1 cut(s) 1881
PspPI GGNCC 2 cut(s) 785, 1879
PspPPI RGGWCCY 1 cut(s) 1879
PstI CTGCAG 1 cut(s) 1062
PsuI RGATCY 3 cut(s) 79, 1984, 2019
PvuI CGATCG 1 cut(s) 162
PvuII CAGCTG 2 cut(s) 923, 1283
RsaI GTAC 2 cut(s) 67, 328
RsaNI GTAC 2 cut(s) 66, 327
RseI CAYNNNNRTG 2 cut(s) 531, 822
SacII CCGCGG 1 cut(s) 303
SapI GCTCTTC 2 cut(s) 1442, 1753
SatI GCNGC 8 cut(s) 204, 282, 285, 303, 1188, 1425, 1453, 1528
Sau96I GGNCC 2 cut(s) 785, 1879
ScaI AGTACT 1 cut(s) 328
SchI GAGTC 4 cut(s) 208, 911, 1053, 1481
ScrFI CCNGG 3 cut(s) 27, 37, 789
SduI GDGCHC 2 cut(s) 33, 133
SfaNI GCATC 5 cut(s) 532, 887, 1174, 1501, 1788
SfcI CTRYAG 3 cut(s) 1058, 1114, 1254
Sfr303I CCGCGG 1 cut(s) 303
SfuI TTCGAA 1 cut(s) 413
SgrBI CCGCGG 1 cut(s) 303
SinI GGWCC 1 cut(s) 1879
SmiMI CAYNNNNRTG 2 cut(s) 531, 822
SmlI CTYRAG 5 cut(s) 353, 832, 1310, 1489, 1814
SmoI CTYRAG 5 cut(s) 353, 832, 1310, 1489, 1814
SnaBI TACGTA 1 cut(s) 1636
SspI AATATT 3 cut(s) 710, 961, 1569
SspMI CTAG 3 cut(s) 312, 801, 1524
StyD4I CCNGG 3 cut(s) 25, 35, 787
StyI CCWWGG 1 cut(s) 1104
TaaI ACNGT 7 cut(s) 13, 128, 188, 389, 1158, 1334, 1583
TaiI ACGT 3 cut(s) 781, 843, 1638
TaqI TCGA 9 cut(s) 8, 155, 162, 212, 413, 1047, 1320, 1509, 1659
TatI WGTACW 1 cut(s) 326
TauI GCSGC 5 cut(s) 206, 284, 287, 305, 1455
TfiI GAWTC 4 cut(s) 209, 730, 980, 2029
TscAI CASTG 5 cut(s) 133, 193, 1156, 1161, 1395
TseFI GTSAC 1 cut(s) 1062
TseI GCWGC 3 cut(s) 1187, 1424, 1527
Tsp45I GTSAC 1 cut(s) 1062
TspDTI ATGAA 6 cut(s) 432, 459, 482, 806, 887, 1704
TspGWI ACGGA 2 cut(s) 154, 650
TspRI CASTG 5 cut(s) 133, 193, 1156, 1161, 1395
Vha464I CTTAAG 1 cut(s) 832
VpaK11BI GGWCC 1 cut(s) 1879
VspI ATTAAT 1 cut(s) 1652
XapI RAATTY 3 cut(s) 457, 489, 1008
XceI RCATGY 1 cut(s) 853
XmnI GAANNNNTTC 5 cut(s) 461, 894, 1053, 1199, 1480
XspI CTAG 3 cut(s) 312, 801, 1524
ZrmI AGTACT 1 cut(s) 328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.