Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000218.1

Orthogroup ID

OG0011878

Physical Location & Seq

Genomic Coordinates Reverse (-)

201969 .. 208254

Gene Structure 6286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000218.1_g000049.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2691 bp

atgcggatcggagcgggagctgacctgggaataatagagaagcttccctcgagcgttgacctggagtttgactgtcggatcgaggagaagggggggtacctgcggaaaaccctccgatgcctaagcgatgacttacttcgggaacaagcagccatgatttctgctttgatggctgcatttatttacacacttataatgacccttattgctgcactaataacagctaatcattgcgcccagcagaattttctcactcccacatcctctccttctttgtcacttagtgagagaagtcatcagagaccttgccggactcaggtgaccagtggccagccggggactccggtggtgaactccagcgacctgtcacaggaatccggctaccgaactgccgtcaagtactcgcagcaccggaatcacaccaagctcgtctctaattccgaagccgaggcgatgcggcccaggattgtacagatttccgtcactgacgacgacgccactgattcctccagcgacgacaagccggagccggaggccgaagaggcggcggcggtttggaagagcaggacgtcgagaccgagcaagctctctccctcactcccaacacaacgaacaagactagaggacgacgacgacatggacacgaagctggcgccggggctctcccggaagttgaagaaggttctggactgccgcaccgactctcccgacgtgctctcctccctcaacacactctcatccttctatgccgaaaatacccctcagtcgcggcgcaatctcagatcgagcatcgagaagcgaggcctctccatcaacgtcgacttcctcgaggcgtcgcgtgcggcgcagcaggccctggatcgcgtggaggacgaggtcaatgccttggccaattgctgcgacaagatcgccaaggctctcaacagctgcagtgccaccaccggtgacattatcaccaccaccgagcggctcaagcaggagcttaacgtcaccactcaaaggcagcagatcgtctcctgcttcctccgcgattaccagctctccaaccaagagatcaatgctttgagggaggaagaactgaacgaggacttcttcaaggcgctctctcacgttcaggaaattcatgctaattgtaaactgctactgaggactcatcaccagcgtgctggtttggagctcatggatatgatggctgtgtaccaagagggagcttatgaacgcctctgcaggtgggttcaggcggaatgtaggcagcttggtgactctgataatcctcaagttagtgatcttttgagaactgcggttcgttgcctcaaggaaaggcctgtgctttttaagtactgtgcagaagaggtagcgaatatgaggcataatgcattgttcagacggtttatcagtgctcttacacgtggaggacctggaggagtgccgcgacctattgaagttcatgctcatgatccattacgatatgttggggatatgctcgggtggttacatcaggccttggcatctgaacgtgaacttgtacttgcactacttgatccagattctattgctgatagtccaaccacaaaccaaatgtccaagagccaagaaagtgattctcagaagacagagtctgatattacatttgttctggatagaatatttgaaggagtttgccgtccatttaaattgagagttgaacaagttttgcagtctcaatccagtctcataatttcatataaactaagtaacaccctggagttttacagttacactatatcagatttgcttgggagagatacagctttatctaataccctgtggacactgaaagatgctgctcagaaaactttttttgatattttgaaaacccggggggaaaagcttttgaggtatcctccccttgttgctgttgacctttctccacccccagctgtaagagaaggagtctctgtgctgcttgaattagttgagacccattacagcatgatgcttcagaaaaagcctcctttcgatccagtcatatctgctttactcgatccaattattcagatatgtgaacaagcagcagaggcacacaagtccaagggagttggccattcttcaagaagaagtagaatgggttctgattctggtcaattcagtaagtcctcagttgatgcactactgtccagcagttctgccccatcacctcagtctagtgaaacatcctccaaaattttcctcatcaactgcttgtgtgccatccaacaaccattgttgggacatgaggttgcagcagagtatgtgaagagtcttggggcaatgatagacagacacatacacggtctcgtagaaaatgaagtcgatgcgatccttaaaagatgtggcttgtcaaccaaaatgtctcacttccgagactcggtcaacaaagagtctggcaatactccattggtagagattgaggacacttctccagctgctctttctgagagtttgaaggctttctttgggcttgttttgggaagtgacagctccctgcctgaatttgagcagatgcaggttccaaagttgcgtgctgaagcttgcatccaagtggccaaagcattggcagaaacatatgaccttacatacgaggcaattatggatccgaagaatggctactcagatcccaagtcacttgcaaggcatcctccggaccagataaggaccattttaggaatatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006891 GO:0008150 GO:0008152 GO:0012505 GO:0016192 GO:0017119 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048193 GO:0051179 GO:0051234 GO:0070085 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG6

Protein Analysis

896

Amino Acids

99.4

Weight (kDa)

5.73

Isoelectric Point (pI)

51.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31780
fragaria_vesca	FvH4_2g37280 FvH4_2g37280
malus_domestica	MD13G1243800.v1.1 MD13G1243900.v1.1 MD13G1244000.v1.1
prunus_persica	Prupe.1G077200_v2.0.a1
pyrus_communis	pycom13g21520 pycom16g21010
rosa_chinensis	RchiOBHm_Chr6g0304421
rosa_laevigata	RLG00000010980
rosa_multiflora	Rmu_ssc0000218.1_g000049
rosa_roxburghii	Rroxscaffold_7G00163750
rosa_rugosa	Rorug06G0331400
rosa_samantha	Rh6AG444300 Rh6BG458100 Rh6CG457100 Rh6DG443800
rosa_wichuraiana	Rw6G038570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	194
AarI	CACCTGC	1 cut(s)	1218
AatII	GACGTC	1 cut(s)	572
AbsI	CCTCGAGG	1 cut(s)	827
Acc36I	ACCTGC	3 cut(s)	108, 1218, 2515
Acc65I	GGTACC	1 cut(s)	96
AccB1I	GGYRCC	2 cut(s)	96, 652
AccBSI	CCGCTC	2 cut(s)	14, 967
AccI	GTMKAC	1 cut(s)	819
AccII	CGCG	5 cut(s)	769, 838, 864, 1029, 1432
AccIII	TCCGGA	1 cut(s)	2659
AcoI	YGGCCR	4 cut(s)	328, 888, 2080, 2562
AcsI	RAATTY	4 cut(s)	244, 1119, 2202, 2510
AcuI	CTGAAG	2 cut(s)	1964, 2565
AcvI	CACGTG	1 cut(s)	1409
AcyI	GRCGYC	4 cut(s)	495, 569, 653, 833
AdeI	CACNNNGTG	1 cut(s)	284
AfaI	GTAC	6 cut(s)	98, 401, 471, 1199, 1340, 1527
AfiI	CCNNNNNNNGG	7 cut(s)	316, 370, 966, 999, 2246, 2386, 2621
AflIII	ACRYGT	1 cut(s)	1406
AgeI	ACCGGT	1 cut(s)	941
AgsI	TTSAA	9 cut(s)	676, 1096, 1442, 1652, 1685, 1852, 1949, 2091, 2464
AjiI	CACGTC	1 cut(s)	712
AjnI	CCWGG	6 cut(s)	24, 60, 461, 855, 1417, 1740
AleI	CACNNNNGTG	1 cut(s)	1161
Alw21I	GWGCWC	3 cut(s)	717, 1179, 1402
AlwNI	CAGNNNCTG	2 cut(s)	856, 1619
Ama87I	CYCGRG	4 cut(s)	49, 827, 1484, 1857
Aor13HI	TCCGGA	1 cut(s)	2659
ApoI	RAATTY	4 cut(s)	244, 1119, 2202, 2510
ArsI	GACNNNNNNTTYG	4 cut(s)	50, 82, 1565, 1597
AsiGI	ACCGGT	1 cut(s)	941
Asp700I	GAANNNNTTC	2 cut(s)	2107, 2468
Asp718I	GGTACC	1 cut(s)	96
AspLEI	GCGC	5 cut(s)	236, 655, 774, 847, 1102
AspS9I	GGNCC	5 cut(s)	459, 853, 1415, 2662, 2673
AsuC2I	CCSGG	5 cut(s)	336, 657, 667, 1858, 1859
AsuHPI	GGTGA	8 cut(s)	331, 361, 946, 956, 982, 1148, 1271, 2166
AvaI	CYCGRG	4 cut(s)	49, 827, 1484, 1857
AvaII	GGWCC	3 cut(s)	1415, 2662, 2673
BalI	TGGCCA	4 cut(s)	330, 890, 2082, 2564
BamHI	GGATCC	1 cut(s)	2611
BanI	GGYRCC	2 cut(s)	96, 652
BanII	GRGCYC	2 cut(s)	663, 1179
BarI	GAAGNNNNNNTAC	4 cut(s)	80, 112, 2609, 2641
BbrPI	CACGTG	1 cut(s)	1409
BbsI	GAAGAC	1 cut(s)	1616
Bbv12I	GWGCWC	3 cut(s)	717, 1179, 1402
BccI	CCATC	5 cut(s)	163, 818, 1183, 2179, 2237
BceAI	ACGGC	2 cut(s)	377, 1647
BcgI	CGANNNNNNTGC	2 cut(s)	863, 897
BciT130I	CCWGG	6 cut(s)	26, 62, 463, 857, 1419, 1742
BciVI	GTATCC	1 cut(s)	1890
BcnI	CCSGG	5 cut(s)	336, 657, 667, 1858, 1859
BfaI	CTAG	2 cut(s)	620, 2184
BfmI	CTRYAG	2 cut(s)	928, 1225
BfoI	RGCGCY	2 cut(s)	656, 1103
BfuAI	ACCTGC	3 cut(s)	108, 1218, 2515
BfuI	GTATCC	1 cut(s)	1890
BglI	GCCNNNNNGGC	1 cut(s)	542
BmcAI	AGTACT	2 cut(s)	401, 1340
Bme18I	GGWCC	3 cut(s)	1415, 2662, 2673
BmeT110I	CYCGRG	4 cut(s)	49, 827, 1484, 1857
BmgBI	CACGTC	1 cut(s)	712
BmgT120I	GGNCC	5 cut(s)	459, 853, 1415, 2662, 2673
BmiI	GGNNCC	5 cut(s)	98, 528, 654, 2529, 2613
BpiI	GAAGAC	1 cut(s)	1616
BplI	GAGNNNNNCTC	2 cut(s)	1867, 1899
BpmI	CTGGAG	6 cut(s)	83, 340, 493, 1440, 1763, 2424
Bpu10I	CCTNAGC	1 cut(s)	122
BpuEI	CTTGAG	3 cut(s)	956, 1260, 1298
BpuMI	CCSGG	5 cut(s)	336, 657, 667, 1858, 1859
BsaAI	YACGTR	1 cut(s)	1409
BsaHI	GRCGYC	4 cut(s)	495, 569, 653, 833
BsaI	GGTCTC	4 cut(s)	295, 568, 1952, 2318
BsaWI	WCCGGW	4 cut(s)	343, 411, 941, 2659
Bsc4I	CCNNNNNNNGG	7 cut(s)	316, 370, 966, 999, 2246, 2386, 2621
Bse118I	RCCGGY	1 cut(s)	941
Bse1I	ACTGG	3 cut(s)	324, 1707, 2003
Bse3DI	GCAATG	2 cut(s)	229, 2295
BseAI	TCCGGA	1 cut(s)	2659
BseBI	CCWGG	6 cut(s)	26, 62, 463, 857, 1419, 1742
BseGI	GGATG	6 cut(s)	260, 737, 2192, 2229, 2553, 2653
BseLI	CCNNNNNNNGG	7 cut(s)	316, 370, 966, 999, 2246, 2386, 2621
BseMI	GCAATG	2 cut(s)	229, 2295
BseNI	ACTGG	3 cut(s)	324, 1707, 2003
BseRI	GAGGAG	3 cut(s)	98, 709, 1437
BseYI	CCCAGC	2 cut(s)	237, 1915
BsgI	GTGCAG	2 cut(s)	195, 1365
Bsh1236I	CGCG	5 cut(s)	769, 838, 864, 1029, 1432
BshNI	GGYRCC	2 cut(s)	96, 652
BshTI	ACCGGT	1 cut(s)	941
BsiHKAI	GWGCWC	3 cut(s)	717, 1179, 1402
BsiHKCI	CYCGRG	4 cut(s)	49, 827, 1484, 1857
BslFI	GGGAC	2 cut(s)	352, 2262
BslI	CCNNNNNNNGG	7 cut(s)	316, 370, 966, 999, 2246, 2386, 2621
BsmBI	CGTCTC	2 cut(s)	436, 1018
BsmFI	GGGAC	2 cut(s)	352, 2262
Bso31I	GGTCTC	4 cut(s)	295, 568, 1952, 2318
BsoBI	CYCGRG	4 cut(s)	49, 827, 1484, 1857
Bsp1286I	GDGCHC	4 cut(s)	663, 717, 1179, 1402
Bsp13I	TCCGGA	1 cut(s)	2659
Bsp1407I	TGTACA	1 cut(s)	469
BspEI	TCCGGA	1 cut(s)	2659
BspFNI	CGCG	5 cut(s)	769, 838, 864, 1029, 1432
BspHI	TCATGA	1 cut(s)	1453
BspLI	GGNNCC	5 cut(s)	98, 528, 654, 2529, 2613
BspMAI	CTGCAG	2 cut(s)	932, 1229
BspMI	ACCTGC	3 cut(s)	108, 1218, 2515
BspQI	GCTCTTC	1 cut(s)	554
BspT107I	GGYRCC	2 cut(s)	96, 652
BspTNI	GGTCTC	4 cut(s)	295, 568, 1952, 2318
BsrBI	CCGCTC	2 cut(s)	14, 967
BsrDI	GCAATG	2 cut(s)	229, 2295
BsrFI	RCCGGY	1 cut(s)	941
BsrGI	TGTACA	1 cut(s)	469
BsrI	ACTGG	3 cut(s)	324, 1707, 2003
BssAI	RCCGGY	1 cut(s)	941
BssNI	GRCGYC	4 cut(s)	495, 569, 653, 833
BssT1I	CCWWGG	4 cut(s)	885, 912, 1503, 2070
Bst2UI	CCWGG	6 cut(s)	26, 62, 463, 857, 1419, 1742
Bst4CI	ACNGT	6 cut(s)	74, 1343, 1389, 1754, 2154, 2312
Bst6I	CTCTTC	4 cut(s)	534, 554, 1344, 2270
BstACI	GRCGYC	4 cut(s)	495, 569, 653, 833
BstAUI	TGTACA	1 cut(s)	469
BstBAI	YACGTR	1 cut(s)	1409
BstC8I	GCNNGC	8 cut(s)	332, 584, 651, 840, 852, 1164, 2541, 2551
BstEII	GGTNACC	1 cut(s)	319
BstENI	CCTNNNNNAGG	1 cut(s)	368
BstF5I	GGATG	6 cut(s)	260, 737, 2192, 2229, 2553, 2653
BstFNI	CGCG	5 cut(s)	769, 838, 864, 1029, 1432
BstH2I	RGCGCY	2 cut(s)	656, 1103
BstHHI	GCGC	5 cut(s)	236, 655, 774, 847, 1102
BstMWI	GCNNNNNNNGC	8 cut(s)	170, 542, 839, 844, 851, 973, 1026, 2057
BstNI	CCWGG	6 cut(s)	26, 62, 463, 857, 1419, 1742
BstPI	GGTNACC	1 cut(s)	319
BstSFI	CTRYAG	2 cut(s)	928, 1225
BstUI	CGCG	5 cut(s)	769, 838, 864, 1029, 1432
BstV2I	GAAGAC	1 cut(s)	1616
BstX2I	RGATCY	2 cut(s)	2611, 2632
BstXI	CCANNNNNNTGG	2 cut(s)	1166, 2572
BstYI	RGATCY	2 cut(s)	2611, 2632
BsuI	GTATCC	1 cut(s)	1890
BtgZI	GCGATG	2 cut(s)	141, 467
BtrI	CACGTC	1 cut(s)	712
BtsCI	GGATG	6 cut(s)	260, 737, 2192, 2229, 2553, 2653
BtsI	GCAGTG	1 cut(s)	937
BtsIMutI	CAGTG	6 cut(s)	331, 483, 498, 937, 1402, 1811
BveI	ACCTGC	3 cut(s)	108, 1218, 2515
Cac8I	GCNNGC	8 cut(s)	332, 584, 651, 840, 852, 1164, 2541, 2551
CaiI	CAGNNNCTG	2 cut(s)	856, 1619
CciI	TCATGA	1 cut(s)	1453
CfoI	GCGC	5 cut(s)	236, 655, 774, 847, 1102
Cfr10I	RCCGGY	1 cut(s)	941
Cfr13I	GGNCC	5 cut(s)	459, 853, 1415, 2662, 2673
Cfr9I	CCCGGG	1 cut(s)	1857
CseI	GACGC	2 cut(s)	503, 822
Csp6I	GTAC	6 cut(s)	97, 400, 470, 1198, 1339, 1526
CspAI	ACCGGT	1 cut(s)	941
CviAII	CATG	8 cut(s)	154, 637, 1124, 1180, 1448, 1454, 1972, 2252
CviQI	GTAC	6 cut(s)	97, 400, 470, 1198, 1339, 1526
DinI	GGCGCC	1 cut(s)	654
DraI	TTTAAA	1 cut(s)	1672
DraIII	CACNNNGTG	1 cut(s)	284
EaeI	YGGCCR	4 cut(s)	328, 888, 2080, 2562
Eam1104I	CTCTTC	4 cut(s)	534, 554, 1344, 2270
EarI	CTCTTC	4 cut(s)	534, 554, 1344, 2270
EciI	GGCGGA	1 cut(s)	1256
Ecl136II	GAGCTC	1 cut(s)	1177
Eco130I	CCWWGG	4 cut(s)	885, 912, 1503, 2070
Eco147I	AGGCCT	3 cut(s)	804, 1324, 1502
Eco24I	GRGCYC	2 cut(s)	663, 1179
Eco31I	GGTCTC	4 cut(s)	295, 568, 1952, 2318
Eco47I	GGWCC	3 cut(s)	1415, 2662, 2673
Eco53kI	GAGCTC	1 cut(s)	1177
Eco57I	CTGAAG	2 cut(s)	1964, 2565
Eco72I	CACGTG	1 cut(s)	1409
Eco88I	CYCGRG	4 cut(s)	49, 827, 1484, 1857
Eco91I	GGTNACC	1 cut(s)	319
EcoICRI	GAGCTC	1 cut(s)	1177
EcoNI	CCTNNNNNAGG	1 cut(s)	368
EcoO109I	RGGNCCY	2 cut(s)	853, 1415
EcoO65I	GGTNACC	1 cut(s)	319
EcoRII	CCWGG	6 cut(s)	24, 60, 461, 855, 1417, 1740
EcoT14I	CCWWGG	4 cut(s)	885, 912, 1503, 2070
EcoT22I	ATGCAT	1 cut(s)	1378
EcoT38I	GRGCYC	2 cut(s)	663, 1179
EgeI	GGCGCC	1 cut(s)	654
EheI	GGCGCC	1 cut(s)	654
ErhI	CCWWGG	4 cut(s)	885, 912, 1503, 2070
Esp3I	CGTCTC	2 cut(s)	436, 1018
FaeI	CATG	8 cut(s)	157, 640, 1127, 1183, 1451, 1457, 1975, 2255
FalI	AAGNNNNNCTT	2 cut(s)	2456, 2488
FaqI	GGGAC	2 cut(s)	352, 2262
FatI	CATG	8 cut(s)	153, 636, 1123, 1179, 1447, 1453, 1971, 2251
FauI	CCCGC	1 cut(s)	7
FauNDI	CATATG	1 cut(s)	2584
FblI	GTMKAC	1 cut(s)	819
FokI	GGATG	6 cut(s)	247, 724, 2179, 2216, 2540, 2640
FriOI	GRGCYC	2 cut(s)	663, 1179
FspBI	CTAG	2 cut(s)	620, 2184
GlaI	GCGC	5 cut(s)	235, 654, 773, 846, 1101
GsaI	CCCAGC	2 cut(s)	241, 1919
GsuI	CTGGAG	6 cut(s)	83, 340, 493, 1440, 1763, 2424
HaeII	RGCGCY	2 cut(s)	656, 1103
HgaI	GACGC	2 cut(s)	503, 822
HhaI	GCGC	5 cut(s)	236, 655, 774, 847, 1102
Hin1I	GRCGYC	4 cut(s)	495, 569, 653, 833
Hin1II	CATG	8 cut(s)	157, 640, 1127, 1183, 1451, 1457, 1975, 2255
Hin6I	GCGC	5 cut(s)	234, 653, 772, 845, 1100
HinP1I	GCGC	5 cut(s)	234, 653, 772, 845, 1100
HincII	GTYRAC	5 cut(s)	58, 820, 1900, 2361, 2392
HindII	GTYRAC	5 cut(s)	58, 820, 1900, 2361, 2392
HindIII	AAGCTT	3 cut(s)	41, 1868, 2547
HphI	GGTGA	8 cut(s)	331, 361, 946, 956, 982, 1148, 1271, 2166
Hpy99I	CGWCG	9 cut(s)	494, 497, 518, 574, 632, 635, 713, 821, 838
HpyAV	CCTTC	7 cut(s)	82, 279, 673, 751, 1646, 1922, 2458
HpyCH4III	ACNGT	6 cut(s)	74, 1343, 1389, 1754, 2154, 2312
HpyCH4IV	ACGT	7 cut(s)	569, 711, 816, 987, 1110, 1408, 1516
HpyF10VI	GCNNNNNNNGC	8 cut(s)	170, 542, 839, 844, 851, 973, 1026, 2057
HpySE526I	ACGT	7 cut(s)	569, 711, 816, 987, 1110, 1408, 1516
Hsp92I	GRCGYC	4 cut(s)	495, 569, 653, 833
Hsp92II	CATG	8 cut(s)	157, 640, 1127, 1183, 1451, 1457, 1975, 2255
HspAI	GCGC	5 cut(s)	234, 653, 772, 845, 1100
KasI	GGCGCC	1 cut(s)	652
Kpn2I	TCCGGA	1 cut(s)	2659
KpnI	GGTACC	1 cut(s)	100
LguI	GCTCTTC	1 cut(s)	554
LmnI	GCTCC	7 cut(s)	11, 17, 526, 979, 1174, 1208, 2504
MaeI	CTAG	2 cut(s)	620, 2184
MaeII	ACGT	7 cut(s)	569, 711, 816, 987, 1110, 1408, 1516
MbiI	CCGCTC	2 cut(s)	14, 967
MfeI	CAATTG	1 cut(s)	892
MflI	RGATCY	2 cut(s)	2611, 2632
MhlI	GDGCHC	4 cut(s)	663, 717, 1179, 1402
MlsI	TGGCCA	4 cut(s)	330, 890, 2082, 2564
MluNI	TGGCCA	4 cut(s)	330, 890, 2082, 2564
Mly113I	GGCGCC	1 cut(s)	653
MmeI	TCCRAC	4 cut(s)	56, 1068, 1589, 2257
Mox20I	TGGCCA	4 cut(s)	330, 890, 2082, 2564
Mph1103I	ATGCAT	1 cut(s)	1378
MroI	TCCGGA	1 cut(s)	2659
MroXI	GAANNNNTTC	2 cut(s)	2107, 2468
MscI	TGGCCA	4 cut(s)	330, 890, 2082, 2564
MseI	TTAA	4 cut(s)	984, 1335, 1671, 2343
MslI	CAYNNNNRTG	4 cut(s)	1161, 1184, 1452, 2558
Msp20I	TGGCCA	4 cut(s)	330, 890, 2082, 2564
MspA1I	CMGCKG	3 cut(s)	927, 1919, 2444
MunI	CAATTG	1 cut(s)	892
MvaI	CCWGG	6 cut(s)	26, 62, 463, 857, 1419, 1742
MvnI	CGCG	5 cut(s)	769, 838, 864, 1029, 1432
MwoI	GCNNNNNNNGC	8 cut(s)	170, 542, 839, 844, 851, 973, 1026, 2057
NarI	GGCGCC	1 cut(s)	653
NciI	CCSGG	5 cut(s)	336, 657, 667, 1858, 1859
NdeI	CATATG	1 cut(s)	2584
NlaIII	CATG	8 cut(s)	157, 640, 1127, 1183, 1451, 1457, 1975, 2255
NlaIV	GGNNCC	5 cut(s)	98, 528, 654, 2529, 2613
NmeAIII	GCCGAG	1 cut(s)	472
NmuCI	GTSAC	9 cut(s)	276, 319, 366, 481, 944, 988, 1259, 2492, 2640
NsiI	ATGCAT	1 cut(s)	1378
OliI	CACNNNNGTG	1 cut(s)	1161
PaeR7I	CTCGAG	2 cut(s)	49, 827
PagI	TCATGA	1 cut(s)	1453
PaqCI	CACCTGC	1 cut(s)	1218
PceI	AGGCCT	3 cut(s)	804, 1324, 1502
PciSI	GCTCTTC	1 cut(s)	554
PcsI	WCGNNNNNNNCGW	2 cut(s)	575, 825
PdmI	GAANNNNTTC	2 cut(s)	2107, 2468
PfeI	GAWTC	6 cut(s)	374, 415, 503, 1547, 1601, 2114
PflFI	GACNNNGTC	3 cut(s)	875, 1615, 2387
PfoI	TCCNGGA	1 cut(s)	665
PinAI	ACCGGT	1 cut(s)	941
PluTI	GGCGCC	1 cut(s)	656
PmaCI	CACGTG	1 cut(s)	1409
PmlI	CACGTG	1 cut(s)	1409
Ppu21I	YACGTR	1 cut(s)	1409
PpuMI	RGGWCCY	1 cut(s)	1415
PsiI	TTATAA	1 cut(s)	194
Psp124BI	GAGCTC	1 cut(s)	1179
Psp5II	RGGWCCY	1 cut(s)	1415
Psp6I	CCWGG	6 cut(s)	24, 60, 461, 855, 1417, 1740
PspCI	CACGTG	1 cut(s)	1409
PspEI	GGTNACC	1 cut(s)	319
PspFI	CCCAGC	2 cut(s)	237, 1915
PspGI	CCWGG	6 cut(s)	24, 60, 461, 855, 1417, 1740
PspN4I	GGNNCC	5 cut(s)	98, 528, 654, 2529, 2613
PspPI	GGNCC	5 cut(s)	459, 853, 1415, 2662, 2673
PspPPI	RGGWCCY	1 cut(s)	1415
PspXI	VCTCGAGB	2 cut(s)	49, 827
PsrI	GAACNNNNNNTAC	2 cut(s)	2092, 2124
PstI	CTGCAG	2 cut(s)	932, 1229
PstNI	CAGNNNCTG	2 cut(s)	856, 1619
PsuI	RGATCY	2 cut(s)	2611, 2632
PsyI	GACNNNGTC	3 cut(s)	875, 1615, 2387
PvuII	CAGCTG	3 cut(s)	927, 1919, 2444
RsaI	GTAC	6 cut(s)	98, 401, 471, 1199, 1340, 1527
RsaNI	GTAC	6 cut(s)	97, 400, 470, 1198, 1339, 1526
RseI	CAYNNNNRTG	4 cut(s)	1161, 1184, 1452, 2558
SacI	GAGCTC	1 cut(s)	1179
SalI	GTCGAC	1 cut(s)	818
SapI	GCTCTTC	1 cut(s)	554
SaqAI	TTAA	4 cut(s)	984, 1335, 1671, 2343
Sau96I	GGNCC	5 cut(s)	459, 853, 1415, 2662, 2673
ScaI	AGTACT	2 cut(s)	401, 1340
SduI	GDGCHC	4 cut(s)	663, 717, 1179, 1402
SfcI	CTRYAG	2 cut(s)	928, 1225
SfoI	GGCGCC	1 cut(s)	654
Sfr274I	CTCGAG	2 cut(s)	49, 827
SgrAI	CRCCGGYG	1 cut(s)	941
SinI	GGWCC	3 cut(s)	1415, 2662, 2673
SlaI	CTCGAG	2 cut(s)	49, 827
SmaI	CCCGGG	1 cut(s)	1859
SmiI	ATTTAAAT	1 cut(s)	1672
SmiMI	CAYNNNNRTG	4 cut(s)	1161, 1184, 1452, 2558
SmlI	CTYRAG	5 cut(s)	49, 827, 971, 1275, 1313
SmoI	CTYRAG	5 cut(s)	49, 827, 971, 1275, 1313
SseBI	AGGCCT	3 cut(s)	804, 1324, 1502
SspDI	GGCGCC	1 cut(s)	652
SspI	AATATT	1 cut(s)	1647
SspMI	CTAG	2 cut(s)	620, 2184
SstI	GAGCTC	1 cut(s)	1179
StuI	AGGCCT	3 cut(s)	804, 1324, 1502
StyI	CCWWGG	4 cut(s)	885, 912, 1503, 2070
SwaI	ATTTAAAT	1 cut(s)	1672
TaaI	ACNGT	6 cut(s)	74, 1343, 1389, 1754, 2154, 2312
TaiI	ACGT	7 cut(s)	572, 714, 819, 990, 1113, 1411, 1519
TaqII	GACCGA	2 cut(s)	592, 2377
TatI	WGTACW	4 cut(s)	399, 469, 1338, 1525
TauI	GCSGC	8 cut(s)	460, 548, 551, 696, 772, 845, 970, 1432
TfiI	GAWTC	6 cut(s)	374, 415, 503, 1547, 1601, 2114
Tru1I	TTAA	4 cut(s)	984, 1335, 1671, 2343
Tru9I	TTAA	4 cut(s)	984, 1335, 1671, 2343
TscAI	CASTG	6 cut(s)	331, 490, 505, 937, 1402, 1818
TseFI	GTSAC	9 cut(s)	276, 319, 366, 481, 944, 988, 1259, 2492, 2640
Tsp45I	GTSAC	9 cut(s)	276, 319, 366, 481, 944, 988, 1259, 2492, 2640
TspDTI	ATGAA	5 cut(s)	1112, 1230, 1436, 1710, 2340
TspGWI	ACGGA	1 cut(s)	469
TspMI	CCCGGG	1 cut(s)	1857
TspRI	CASTG	6 cut(s)	331, 490, 505, 937, 1402, 1818
Tth111I	GACNNNGTC	3 cut(s)	875, 1615, 2387
VpaK11BI	GGWCC	3 cut(s)	1415, 2662, 2673
XagI	CCTNNNNNAGG	1 cut(s)	368
XapI	RAATTY	4 cut(s)	244, 1119, 2202, 2510
XhoI	CTCGAG	2 cut(s)	49, 827
XmaI	CCCGGG	1 cut(s)	1857
XmiI	GTMKAC	1 cut(s)	819
XmnI	GAANNNNTTC	2 cut(s)	2107, 2468
XspI	CTAG	2 cut(s)	620, 2184
ZraI	GACGTC	1 cut(s)	570
ZrmI	AGTACT	2 cut(s)	401, 1340
Zsp2I	ATGCAT	1 cut(s)	1378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.