Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0011878

Physical Location & Seq

Genomic Coordinates Reverse (-)

18245288 .. 18249499

Gene Structure 4212 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g21520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGGAACGACGACGCTGGCGCCGGGACTGTCCCGGAAGCTGAAGAAGGTCTTGGAGTGTCGCACCGACTCCCCCGATGTTCTGGCCTCACTCAACACCCTCTCTTCTTTCTATTCCGAAAATACCCCTCAGTCACGGCGGAACCTCCGATCCACCATCGAGAAGCGAGGCCTCGCCACCAACCTCGAGTTCCTCGAGGCCTCCCTGGCAGCCCAAGATGCCTTGGATCGCGTGGAGGACGAGGTCAGTGCCTTGGCCACTAGCTGCGACAAGATCGCCGTCGCTCTCAGCAGCTGCACCGCCACTACTGGTGACATTATCGCCACCACCGAAAGGCTCAAGCAGGAGCTCAACGTTACCACCCAGAGGCAGCAGATCGTGTCTTGCTTCCTCCGCGATTACCAGCTCTCTAATCAAGAGATAAGTGCATTGAGGGATGAAGAACTGAATGAAAACTTCTTCAAGGCGCTTAATCATGTTCAAGAAATTCATGCCAACTGTAAATTGCTCTTGAGGACTCATCACCAGCGTGCCGGTCTGGAGCTCATGGATATGATGGCTGTCTACCAAGAGGGAGCGTACGAGCGCCTGTGCAGGTGGGTTCAGGCGGAATGTAGAAGACTTGGTGACTCTGATAATCCTCAAGTTGATGATCTTTTGAAAACAGCAGTTCGTTGCCTCAAGGAAAGGCCTGTGCTTTTTAAGTATTGTGCAGAAGAGGTAGCAAACATGAGGCATAATGCATTGTTTAGACGGTTTATCAGTGCTCTTACACGTGGAGGACCTGGTGGAATGCCTCGACCGATTGAAGTTCATGCTCATGATCCCTTACGATATGTTGGGGACATGCTAGGCTGGTTACATCAGGCCTTAGCATCTGAGCGGGAACTTGTCTTTGCGTTACTGGATCCAGATGCTACGGGAGATACTAGTCCAACCAGAAACCAGTTCTCCAAGAGCCCTGAGAGTGATTCTCGAAAGACAGAATCTGATTTGATGTTTGTTATGGATAGAATTTTTGAGGGAGTTTGCCGGCCATTTAAAGTAAGGGTTGAACAAGTTTTGCAGTCCCAGTCCAGTCTCATAATTTCATACAAACTAAGTAATACCCTGGAGTTCTACAGTCACACTGTATCAGAATTTATTGGGAGAGAAACAGCTTTATCTGATACACTGTGGACACTAAAAGATGCTGCTCAGAAAACTTTCTTTGATATTCTGAAAACCCGAGGGGAAAAGCTTTTGAGGTACCCTCCCCTTGTTTCTGTTGATCTCTCCCCTCCACCAGCAGTAAGGGAAGGAGTCTCACTGTTGCTTGAAATAGTTGAGACTCATAACAGCATGATGCTTCCAACTTTAGGCAAAGATCCTTCTTTTGGTCCAGTCATATCTGCTTTACTTGACCCAATTGTTAAGATATGTGAGCAAGCTGCAGAGGCACACAAGTCCAAGGGAGTTGGCCACTCCTCAAGAAGAAGTAAGATGAGTTCTGACTTAGGTCAATTTGGTAAATCACCAGTTGACGCACTATTGTCCAACAGCAATTCTGCCTCGTCGTCTCAGTCTAGTGAAACATCCTCTAAGATTTTCCTCATCAATTGTTTGTGTGCCATCCAACAACCATTGCTTGGGCATGAGGTCGCAGTGGAATACGTGAAGAACCTCGGGACGATGATAGATAAGCACATGCAAGCCCTTGTAGAAAATGAAGTCGATACGATCCTTAAAAGATGCGGATTGTCGCAGAAGATGACTTATTTCCGTGACTCACTCAGCAGGGAGACTGGCACTACGCCGTTGGTAGAGATAGAGGACACTTCTCCAGCATCTCTTTCCGAGTGTTTGAAGGCTTTCTTTGGGCTTGTCTTGGGAAGTGAAAGTTCCCTGCCTGAATTTGAGCAGATGCAGGTTCCGAAGTTGCGTTCTGAAGCTTGTATCCAAGTGGCTAAATCATTGGCCGAAGCATATGACCTTACGTACGAGGCAATTATGGATCGACCAAAAATGGCTACTCAGATCCTAAGTCACTGGCGAGGCATCCTCCAGACCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006891 GO:0008150 GO:0008152 GO:0012505 GO:0016192 GO:0017119 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048193 GO:0051179 GO:0051234 GO:0070085 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG6

Protein Analysis

685

Amino Acids

76.27

Weight (kDa)

5.93

Isoelectric Point (pI)

52.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG6_N	PF06419	34 - 145	2.2e-28	Conserved oligomeric complex COG6, N-terminal
COG6_C	PF20653	176 - 666	5.8e-138	Conserved Oligomeric Golgi complex subunit 6, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31780
fragaria_vesca	FvH4_2g37280 FvH4_2g37280
malus_domestica	MD13G1243800.v1.1 MD13G1243900.v1.1 MD13G1244000.v1.1
prunus_persica	Prupe.1G077200_v2.0.a1
pyrus_communis	pycom13g21520 pycom16g21010
rosa_chinensis	RchiOBHm_Chr6g0304421
rosa_laevigata	RLG00000010980
rosa_multiflora	Rmu_ssc0000218.1_g000049
rosa_roxburghii	Rroxscaffold_7G00163750
rosa_rugosa	Rorug06G0331400
rosa_samantha	Rh6AG444300 Rh6BG458100 Rh6CG457100 Rh6DG443800
rosa_wichuraiana	Rw6G038570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	585
AbsI	CCTCGAGG	1 cut(s)	194
Acc36I	ACCTGC	2 cut(s)	585, 1897
Acc65I	GGTACC	1 cut(s)	1248
AccB1I	GGYRCC	2 cut(s)	19, 1248
AccB7I	CCANNNNNTGG	1 cut(s)	1628
AccBSI	CCGCTC	1 cut(s)	883
AccI	GTMKAC	1 cut(s)	564
AccII	CGCG	2 cut(s)	231, 396
AciI	CCGC	6 cut(s)	139, 300, 394, 608, 883, 1734
AclI	AACGTT	1 cut(s)	354
AclWI	GGATC	9 cut(s)	144, 234, 818, 902, 915, 1361, 1714, 2001, 2011
AcoI	YGGCCR	4 cut(s)	255, 1034, 1459, 1956
AcsI	RAATTY	4 cut(s)	486, 1014, 1139, 1892
AcuI	CTGAAG	2 cut(s)	62, 1947
AcvI	CACGTG	1 cut(s)	776
AcyI	GRCGYC	1 cut(s)	20
AfaI	GTAC	3 cut(s)	581, 1250, 1979
AfiI	CCNNNNNNNGG	5 cut(s)	333, 366, 1358, 1376, 1628
AflIII	ACRYGT	1 cut(s)	773
AgsI	TTSAA	7 cut(s)	463, 482, 661, 809, 1055, 1319, 1846
AhlI	ACTAGT	1 cut(s)	929
AjnI	CCWGG	3 cut(s)	204, 784, 1110
AjuI	GAANNNNNNNTTGG	4 cut(s)	35, 67, 173, 205
AleI	CACNNNNGTG	1 cut(s)	528
AloI	GAACNNNNNNTCC	2 cut(s)	134, 166
Alw21I	GWGCWC	3 cut(s)	351, 546, 769
Alw26I	GTCTC	5 cut(s)	1085, 1309, 1322, 1563, 1775
AlwI	GGATC	9 cut(s)	144, 234, 818, 902, 915, 1361, 1714, 2001, 2011
AlwNI	CAGNNNCTG	2 cut(s)	294, 989
Ama87I	CYCGRG	4 cut(s)	185, 194, 1227, 1664
AoxI	GGCC	9 cut(s)	84, 169, 198, 255, 689, 867, 1034, 1459, 1956
ApeKI	GCWGC	7 cut(s)	209, 264, 291, 294, 370, 1193, 1430
ApoI	RAATTY	4 cut(s)	486, 1014, 1139, 1892
Asp700I	GAANNNNTTC	2 cut(s)	1205, 1850
Asp718I	GGTACC	1 cut(s)	1248
AspLEI	GCGC	3 cut(s)	22, 469, 588
AspS9I	GGNCC	2 cut(s)	782, 1379
AsuC2I	CCSGG	2 cut(s)	24, 34
AsuHPI	GGTGA	4 cut(s)	323, 515, 638, 1506
AvaI	CYCGRG	4 cut(s)	185, 194, 1227, 1664
AvaII	GGWCC	2 cut(s)	782, 1379
BalI	TGGCCA	2 cut(s)	257, 1461
BamHI	GGATCC	1 cut(s)	907
BanI	GGYRCC	2 cut(s)	19, 1248
BanII	GRGCYC	3 cut(s)	351, 546, 962
BbrPI	CACGTG	1 cut(s)	776
BbsI	GAAGAC	1 cut(s)	625
Bbv12I	GWGCWC	3 cut(s)	351, 546, 769
BbvI	GCAGC	7 cut(s)	221, 251, 281, 303, 382, 1180, 1417
BccI	CCATC	3 cut(s)	164, 550, 1619
BceAI	ACGGC	3 cut(s)	152, 263, 1780
BcgI	CGANNNNNNTGC	2 cut(s)	230, 264
BciT130I	CCWGG	3 cut(s)	206, 786, 1112
BciVI	GTATCC	1 cut(s)	1946
BcnI	CCSGG	2 cut(s)	24, 34
BcoDI	GTCTC	5 cut(s)	1085, 1309, 1322, 1563, 1775
BcuI	ACTAGT	1 cut(s)	929
BfaI	CTAG	4 cut(s)	261, 851, 930, 1566
BfmI	CTRYAG	2 cut(s)	1120, 1431
BfoI	RGCGCY	3 cut(s)	23, 470, 589
BfuAI	ACCTGC	2 cut(s)	585, 1897
BfuI	GTATCC	1 cut(s)	1946
BglI	GCCNNNNNGGC	1 cut(s)	206
BisI	GCNGC	7 cut(s)	210, 265, 292, 295, 371, 1194, 1431
BlsI	GCNGC	7 cut(s)	211, 266, 293, 296, 372, 1195, 1432
Bme1390I	CCNGG	5 cut(s)	24, 34, 206, 786, 1112
Bme18I	GGWCC	2 cut(s)	782, 1379
BmeT110I	CYCGRG	4 cut(s)	185, 194, 1227, 1664
BmgT120I	GGNCC	2 cut(s)	782, 1379
BmiI	GGNNCC	5 cut(s)	21, 143, 909, 1250, 1911
BmrFI	CCNGG	5 cut(s)	24, 34, 206, 786, 1112
BmrI	ACTGGG	1 cut(s)	1066
BmsI	GCATC	9 cut(s)	208, 884, 904, 1180, 1335, 1721, 1835, 1893, 2046
BmuI	ACTGGG	1 cut(s)	1066
BoxI	GACNNNNGTC	1 cut(s)	1497
BpiI	GAAGAC	1 cut(s)	625
BplI	GAGNNNNNCTC	5 cut(s)	958, 990, 1237, 1269, 2025
BpmI	CTGGAG	4 cut(s)	560, 1133, 1806, 2027
Bpu10I	CCTNAGC	1 cut(s)	871
BpuEI	CTTGAG	5 cut(s)	323, 532, 627, 665, 1453
BpuMI	CCSGG	2 cut(s)	24, 34
BsaAI	YACGTR	3 cut(s)	776, 1654, 1977
BsaHI	GRCGYC	1 cut(s)	20
BsaJI	CCNNGG	7 cut(s)	204, 222, 252, 1110, 1228, 1449, 1663
BsaXI	ACNNNNNCTCC	2 cut(s)	935, 965
Bsc4I	CCNNNNNNNGG	5 cut(s)	333, 366, 1358, 1376, 1628
Bse118I	RCCGGY	2 cut(s)	533, 1032
Bse1I	ACTGG	9 cut(s)	313, 909, 946, 1072, 1077, 1382, 1517, 1789, 2033
Bse3DI	GCAATG	1 cut(s)	1622
BseBI	CCWGG	3 cut(s)	206, 786, 1112
BseDI	CCNNGG	7 cut(s)	204, 222, 252, 1110, 1228, 1449, 1663
BseGI	GGATG	4 cut(s)	442, 1574, 1611, 2037
BseLI	CCNNNNNNNGG	5 cut(s)	333, 366, 1358, 1376, 1628
BseMI	GCAATG	1 cut(s)	1622
BseMII	CTCAG	8 cut(s)	143, 301, 870, 954, 1211, 1574, 1786, 2027
BseNI	ACTGG	9 cut(s)	313, 909, 946, 1072, 1077, 1382, 1517, 1789, 2033
BseRI	GAGGAG	1 cut(s)	1456
BseXI	GCAGC	7 cut(s)	221, 251, 281, 303, 382, 1180, 1417
BsgI	GTGCAG	3 cut(s)	280, 613, 732
Bsh1236I	CGCG	2 cut(s)	231, 396
Bsh1285I	CGRYCG	1 cut(s)	803
BshFI	GGCC	9 cut(s)	86, 171, 200, 257, 691, 869, 1036, 1461, 1958
BshNI	GGYRCC	2 cut(s)	19, 1248
BsiEI	CGRYCG	1 cut(s)	803
BsiHKAI	GWGCWC	3 cut(s)	351, 546, 769
BsiHKCI	CYCGRG	4 cut(s)	185, 194, 1227, 1664
BsiSI	CCGG	4 cut(s)	23, 34, 534, 1033
BsiWI	CGTACG	2 cut(s)	579, 1977
BslFI	GGGAC	5 cut(s)	16, 39, 857, 1054, 1681
BslI	CCNNNNNNNGG	5 cut(s)	333, 366, 1358, 1376, 1628
BsmAI	GTCTC	5 cut(s)	1085, 1309, 1322, 1563, 1775
BsmBI	CGTCTC	1 cut(s)	1563
BsmFI	GGGAC	5 cut(s)	16, 39, 857, 1054, 1681
BsmI	GAATGC	1 cut(s)	798
BsnI	GGCC	9 cut(s)	86, 171, 200, 257, 691, 869, 1036, 1461, 1958
BsoBI	CYCGRG	4 cut(s)	185, 194, 1227, 1664
Bsp1286I	GDGCHC	4 cut(s)	351, 546, 769, 962
BspACI	CCGC	6 cut(s)	139, 300, 394, 608, 883, 1734
BspANI	GGCC	9 cut(s)	86, 171, 200, 257, 691, 869, 1036, 1461, 1958
BspCNI	CTCAG	8 cut(s)	142, 300, 871, 955, 1210, 1573, 1785, 2026
BspFNI	CGCG	2 cut(s)	231, 396
BspHI	TCATGA	1 cut(s)	820
BspLI	GGNNCC	5 cut(s)	21, 143, 909, 1250, 1911
BspMAI	CTGCAG	1 cut(s)	1435
BspMI	ACCTGC	2 cut(s)	585, 1897
BspPI	GGATC	9 cut(s)	144, 234, 818, 902, 915, 1361, 1714, 2001, 2011
BspT107I	GGYRCC	2 cut(s)	19, 1248
BsrBI	CCGCTC	1 cut(s)	883
BsrDI	GCAATG	1 cut(s)	1622
BsrFI	RCCGGY	2 cut(s)	533, 1032
BsrI	ACTGG	9 cut(s)	313, 909, 946, 1072, 1077, 1382, 1517, 1789, 2033
BssAI	RCCGGY	2 cut(s)	533, 1032
BssECI	CCNNGG	7 cut(s)	204, 222, 252, 1110, 1228, 1449, 1663
BssNI	GRCGYC	1 cut(s)	20
BssT1I	CCWWGG	3 cut(s)	222, 252, 1449
Bst2UI	CCWGG	3 cut(s)	206, 786, 1112
Bst4CI	ACNGT	7 cut(s)	30, 500, 756, 1124, 1132, 1176, 1311
Bst6I	CTCTTC	2 cut(s)	109, 711
BstACI	GRCGYC	1 cut(s)	20
BstBAI	YACGTR	3 cut(s)	776, 1654, 1977
BstC8I	GCNNGC	5 cut(s)	18, 531, 1034, 1428, 1692
BstF5I	GGATG	4 cut(s)	442, 1574, 1611, 2037
BstFNI	CGCG	2 cut(s)	231, 396
BstH2I	RGCGCY	3 cut(s)	23, 470, 589
BstHHI	GCGC	3 cut(s)	22, 469, 588
BstMAI	GTCTC	5 cut(s)	1085, 1309, 1322, 1563, 1775
BstMCI	CGRYCG	1 cut(s)	803
BstMWI	GCNNNNNNNGC	4 cut(s)	206, 218, 393, 1436
BstNI	CCWGG	3 cut(s)	206, 786, 1112
BstNSI	RCATGY	2 cut(s)	850, 1690
BstPAI	GACNNNNGTC	1 cut(s)	1497
BstSCI	CCNGG	5 cut(s)	22, 32, 204, 784, 1110
BstSFI	CTRYAG	2 cut(s)	1120, 1431
BstSNI	TACGTA	1 cut(s)	1977
BstUI	CGCG	2 cut(s)	231, 396
BstV1I	GCAGC	7 cut(s)	221, 251, 281, 303, 382, 1180, 1417
BstV2I	GAAGAC	1 cut(s)	625
BstX2I	RGATCY	3 cut(s)	907, 1366, 2016
BstYI	RGATCY	3 cut(s)	907, 1366, 2016
BsuI	GTATCC	1 cut(s)	1946
BsuRI	GGCC	9 cut(s)	86, 171, 200, 257, 691, 869, 1036, 1461, 1958
BtsCI	GGATG	4 cut(s)	442, 1574, 1611, 2037
BtsI	GCAGTG	1 cut(s)	1650
BtsIMutI	CAGTG	7 cut(s)	253, 769, 1128, 1172, 1307, 1650, 2026
BveI	ACCTGC	2 cut(s)	585, 1897
Cac8I	GCNNGC	5 cut(s)	18, 531, 1034, 1428, 1692
CaiI	CAGNNNCTG	2 cut(s)	294, 989
CciI	TCATGA	1 cut(s)	820
CfoI	GCGC	3 cut(s)	22, 469, 588
Cfr10I	RCCGGY	2 cut(s)	533, 1032
Cfr13I	GGNCC	2 cut(s)	782, 1379
CseI	GACGC	2 cut(s)	22, 1532
CsiI	ACCWGGT	1 cut(s)	784
Csp6I	GTAC	3 cut(s)	580, 1249, 1978
CviQI	GTAC	3 cut(s)	580, 1249, 1978
DinI	GGCGCC	1 cut(s)	21
DraI	TTTAAA	1 cut(s)	1042
EaeI	YGGCCR	4 cut(s)	255, 1034, 1459, 1956
Eam1104I	CTCTTC	2 cut(s)	109, 711
EarI	CTCTTC	2 cut(s)	109, 711
EciI	GGCGGA	2 cut(s)	154, 623
Ecl136II	GAGCTC	2 cut(s)	349, 544
Eco105I	TACGTA	1 cut(s)	1977
Eco130I	CCWWGG	3 cut(s)	222, 252, 1449
Eco147I	AGGCCT	4 cut(s)	171, 200, 691, 869
Eco24I	GRGCYC	3 cut(s)	351, 546, 962
Eco47I	GGWCC	2 cut(s)	782, 1379
Eco53kI	GAGCTC	2 cut(s)	349, 544
Eco57I	CTGAAG	2 cut(s)	62, 1947
Eco72I	CACGTG	1 cut(s)	776
Eco88I	CYCGRG	4 cut(s)	185, 194, 1227, 1664
EcoICRI	GAGCTC	2 cut(s)	349, 544
EcoO109I	RGGNCCY	1 cut(s)	782
EcoRII	CCWGG	3 cut(s)	204, 784, 1110
EcoT14I	CCWWGG	3 cut(s)	222, 252, 1449
EcoT22I	ATGCAT	1 cut(s)	745
EcoT38I	GRGCYC	3 cut(s)	351, 546, 962
EgeI	GGCGCC	1 cut(s)	21
EheI	GGCGCC	1 cut(s)	21
ErhI	CCWWGG	3 cut(s)	222, 252, 1449
Esp3I	CGTCTC	1 cut(s)	1563
FalI	AAGNNNNNCTT	4 cut(s)	35, 67, 1838, 1870
FaqI	GGGAC	5 cut(s)	16, 39, 857, 1054, 1681
FauI	CCCGC	1 cut(s)	876
FauNDI	CATATG	1 cut(s)	1966
FblI	GTMKAC	1 cut(s)	564
Fnu4HI	GCNGC	7 cut(s)	210, 265, 292, 295, 371, 1194, 1431
FokI	GGATG	4 cut(s)	449, 1561, 1598, 2024
FriOI	GRGCYC	3 cut(s)	351, 546, 962
Fsp4HI	GCNGC	7 cut(s)	210, 265, 292, 295, 371, 1194, 1431
FspBI	CTAG	4 cut(s)	261, 851, 930, 1566
GlaI	GCGC	3 cut(s)	21, 468, 587
GluI	GCNGC	7 cut(s)	210, 265, 292, 295, 371, 1194, 1431
GsuI	CTGGAG	4 cut(s)	560, 1133, 1806, 2027
HaeII	RGCGCY	3 cut(s)	23, 470, 589
HaeIII	GGCC	9 cut(s)	86, 171, 200, 257, 691, 869, 1036, 1461, 1958
HapII	CCGG	4 cut(s)	23, 34, 534, 1033
HgaI	GACGC	2 cut(s)	22, 1532
HhaI	GCGC	3 cut(s)	22, 469, 588
Hin1I	GRCGYC	1 cut(s)	20
Hin6I	GCGC	3 cut(s)	20, 467, 586
HinP1I	GCGC	3 cut(s)	20, 467, 586
HincII	GTYRAC	1 cut(s)	1522
HindII	GTYRAC	1 cut(s)	1522
HindIII	AAGCTT	2 cut(s)	1238, 1929
HinfI	GANTC	8 cut(s)	68, 517, 629, 971, 986, 1302, 1330, 1766
HpaII	CCGG	4 cut(s)	23, 34, 534, 1033
HphI	GGTGA	4 cut(s)	323, 515, 638, 1506
Hpy166II	GTNNAC	3 cut(s)	565, 1179, 1522
Hpy8I	GTNNAC	3 cut(s)	565, 1179, 1522
Hpy99I	CGWCG	4 cut(s)	13, 16, 284, 1558
HpyAV	CCTTC	4 cut(s)	40, 1292, 1380, 1840
HpyCH4III	ACNGT	7 cut(s)	30, 500, 756, 1124, 1132, 1176, 1311
HpyCH4IV	ACGT	4 cut(s)	354, 775, 1653, 1976
HpyCH4V	TGCA	9 cut(s)	297, 428, 594, 713, 743, 1066, 1433, 1690, 1906
HpyF10VI	GCNNNNNNNGC	4 cut(s)	206, 218, 393, 1436
HpySE526I	ACGT	4 cut(s)	354, 775, 1653, 1976
Hsp92I	GRCGYC	1 cut(s)	20
HspAI	GCGC	3 cut(s)	20, 467, 586
KasI	GGCGCC	1 cut(s)	19
KpnI	GGTACC	1 cut(s)	1252
KroI	GCCGGC	1 cut(s)	1032
KroNI	GCCGGC	1 cut(s)	1034
LmnI	GCTCC	3 cut(s)	346, 541, 575
Lsp1109I	GCAGC	7 cut(s)	221, 251, 281, 303, 382, 1180, 1417
LweI	GCATC	9 cut(s)	208, 884, 904, 1180, 1335, 1721, 1835, 1893, 2046
MabI	ACCWGGT	1 cut(s)	784
MaeI	CTAG	4 cut(s)	261, 851, 930, 1566
MaeII	ACGT	4 cut(s)	354, 775, 1653, 1976
MaeIII	GTNAC	9 cut(s)	132, 311, 355, 626, 858, 900, 1124, 1763, 2024
MbiI	CCGCTC	1 cut(s)	883
MboII	GAAGA	9 cut(s)	55, 96, 451, 452, 630, 728, 1485, 1669, 1759
MfeI	CAATTG	2 cut(s)	1407, 1597
MflI	RGATCY	3 cut(s)	907, 1366, 2016
MhlI	GDGCHC	4 cut(s)	351, 546, 769, 962
MlsI	TGGCCA	2 cut(s)	257, 1461
MluNI	TGGCCA	2 cut(s)	257, 1461
Mly113I	GGCGCC	1 cut(s)	20
MlyI	GAGTC	6 cut(s)	62, 511, 623, 1311, 1324, 1760
MmeI	TCCRAC	4 cut(s)	959, 1376, 1560, 1639
Mox20I	TGGCCA	2 cut(s)	257, 1461
Mph1103I	ATGCAT	1 cut(s)	745
MroNI	GCCGGC	1 cut(s)	1032
MroXI	GAANNNNTTC	2 cut(s)	1205, 1850
MscI	TGGCCA	2 cut(s)	257, 1461
MseI	TTAA	5 cut(s)	471, 702, 1041, 1413, 1725
MslI	CAYNNNNRTG	3 cut(s)	528, 551, 819
Msp20I	TGGCCA	2 cut(s)	257, 1461
MspA1I	CMGCKG	1 cut(s)	294
MspI	CCGG	4 cut(s)	23, 34, 534, 1033
MspR9I	CCNGG	5 cut(s)	24, 34, 206, 786, 1112
MunI	CAATTG	2 cut(s)	1407, 1597
Mva1269I	GAATGC	1 cut(s)	798
MvaI	CCWGG	3 cut(s)	206, 786, 1112
MvnI	CGCG	2 cut(s)	231, 396
MwoI	GCNNNNNNNGC	4 cut(s)	206, 218, 393, 1436
NaeI	GCCGGC	1 cut(s)	1034
NarI	GGCGCC	1 cut(s)	20
NciI	CCSGG	2 cut(s)	24, 34
NdeI	CATATG	1 cut(s)	1966
NgoMIV	GCCGGC	1 cut(s)	1032
NlaIV	GGNNCC	5 cut(s)	21, 143, 909, 1250, 1911
NmuCI	GTSAC	6 cut(s)	132, 311, 626, 1124, 1763, 2024
NsiI	ATGCAT	1 cut(s)	745
NspI	RCATGY	2 cut(s)	850, 1690
OliI	CACNNNNGTG	1 cut(s)	528
PaeR7I	CTCGAG	2 cut(s)	185, 194
PagI	TCATGA	1 cut(s)	820
PaqCI	CACCTGC	1 cut(s)	585
PceI	AGGCCT	4 cut(s)	171, 200, 691, 869
PcsI	WCGNNNNNNNCGW	2 cut(s)	192, 327
PctI	GAATGC	1 cut(s)	798
PdiI	GCCGGC	1 cut(s)	1034
PdmI	GAANNNNTTC	2 cut(s)	1205, 1850
PfeI	GAWTC	2 cut(s)	971, 986
Pfl23II	CGTACG	2 cut(s)	579, 1977
PflFI	GACNNNGTC	1 cut(s)	242
PflMI	CCANNNNNTGG	1 cut(s)	1628
PfoI	TCCNGGA	1 cut(s)	32
PkrI	GCNGC	7 cut(s)	211, 266, 293, 296, 372, 1195, 1432
PleI	GAGTC	6 cut(s)	62, 511, 623, 1310, 1324, 1760
PluTI	GGCGCC	1 cut(s)	23
PmaCI	CACGTG	1 cut(s)	776
PmlI	CACGTG	1 cut(s)	776
PpsI	GAGTC	6 cut(s)	62, 511, 623, 1310, 1324, 1760
Ppu21I	YACGTR	3 cut(s)	776, 1654, 1977
PpuMI	RGGWCCY	1 cut(s)	782
PshAI	GACNNNNGTC	1 cut(s)	1497
Psp124BI	GAGCTC	2 cut(s)	351, 546
Psp1406I	AACGTT	1 cut(s)	354
Psp5II	RGGWCCY	1 cut(s)	782
Psp6I	CCWGG	3 cut(s)	204, 784, 1110
PspCI	CACGTG	1 cut(s)	776
PspGI	CCWGG	3 cut(s)	204, 784, 1110
PspLI	CGTACG	2 cut(s)	579, 1977
PspN4I	GGNNCC	5 cut(s)	21, 143, 909, 1250, 1911
PspPI	GGNCC	2 cut(s)	782, 1379
PspPPI	RGGWCCY	1 cut(s)	782
PspXI	VCTCGAGB	2 cut(s)	185, 194
PsrI	GAACNNNNNNTAC	2 cut(s)	1471, 1503
PstI	CTGCAG	1 cut(s)	1435
PstNI	CAGNNNCTG	2 cut(s)	294, 989
PsuI	RGATCY	3 cut(s)	907, 1366, 2016
PsyI	GACNNNGTC	1 cut(s)	242
PvuII	CAGCTG	1 cut(s)	294
RsaI	GTAC	3 cut(s)	581, 1250, 1979
RsaNI	GTAC	3 cut(s)	580, 1249, 1978
RseI	CAYNNNNRTG	3 cut(s)	528, 551, 819
SacI	GAGCTC	2 cut(s)	351, 546
SaqAI	TTAA	5 cut(s)	471, 702, 1041, 1413, 1725
SatI	GCNGC	7 cut(s)	210, 265, 292, 295, 371, 1194, 1431
Sau96I	GGNCC	2 cut(s)	782, 1379
SchI	GAGTC	6 cut(s)	62, 511, 623, 1311, 1324, 1760
ScrFI	CCNGG	5 cut(s)	24, 34, 206, 786, 1112
SduI	GDGCHC	4 cut(s)	351, 546, 769, 962
SexAI	ACCWGGT	1 cut(s)	784
SfaNI	GCATC	9 cut(s)	208, 884, 904, 1180, 1335, 1721, 1835, 1893, 2046
SfcI	CTRYAG	2 cut(s)	1120, 1431
SfoI	GGCGCC	1 cut(s)	21
Sfr274I	CTCGAG	2 cut(s)	185, 194
SinI	GGWCC	2 cut(s)	782, 1379
SlaI	CTCGAG	2 cut(s)	185, 194
SmiMI	CAYNNNNRTG	3 cut(s)	528, 551, 819
SmlI	CTYRAG	7 cut(s)	185, 194, 338, 511, 642, 680, 1468
SmoI	CTYRAG	7 cut(s)	185, 194, 338, 511, 642, 680, 1468
SnaBI	TACGTA	1 cut(s)	1977
SpeI	ACTAGT	1 cut(s)	929
SseBI	AGGCCT	4 cut(s)	171, 200, 691, 869
SsiI	CCGC	6 cut(s)	139, 300, 394, 608, 883, 1734
SspDI	GGCGCC	1 cut(s)	19
SspMI	CTAG	4 cut(s)	261, 851, 930, 1566
SstI	GAGCTC	2 cut(s)	351, 546
StuI	AGGCCT	4 cut(s)	171, 200, 691, 869
StyD4I	CCNGG	5 cut(s)	22, 32, 204, 784, 1110
StyI	CCWWGG	3 cut(s)	222, 252, 1449
TaaI	ACNGT	7 cut(s)	30, 500, 756, 1124, 1132, 1176, 1311
TaiI	ACGT	4 cut(s)	357, 778, 1656, 1979
TaqI	TCGA	7 cut(s)	159, 186, 195, 799, 976, 1713, 1996
TaqII	GACCGA	1 cut(s)	817
TfiI	GAWTC	2 cut(s)	971, 986
Tru1I	TTAA	5 cut(s)	471, 702, 1041, 1413, 1725
Tru9I	TTAA	5 cut(s)	471, 702, 1041, 1413, 1725
TscAI	CASTG	7 cut(s)	253, 769, 1135, 1179, 1314, 1650, 2033
TseFI	GTSAC	6 cut(s)	132, 311, 626, 1124, 1763, 2024
TseI	GCWGC	7 cut(s)	209, 264, 291, 294, 370, 1193, 1430
Tsp45I	GTSAC	6 cut(s)	132, 311, 626, 1124, 1763, 2024
TspDTI	ATGAA	6 cut(s)	453, 465, 479, 803, 1080, 1722
TspGWI	ACGGA	1 cut(s)	1751
TspRI	CASTG	7 cut(s)	253, 769, 1135, 1179, 1314, 1650, 2033
Tth111I	GACNNNGTC	1 cut(s)	242
Van91I	CCANNNNNTGG	1 cut(s)	1628
VpaK11BI	GGWCC	2 cut(s)	782, 1379
XapI	RAATTY	4 cut(s)	486, 1014, 1139, 1892
XceI	RCATGY	2 cut(s)	850, 1690
XhoI	CTCGAG	2 cut(s)	185, 194
XmiI	GTMKAC	1 cut(s)	564
XmnI	GAANNNNTTC	2 cut(s)	1205, 1850
XspI	CTAG	4 cut(s)	261, 851, 930, 1566
Zsp2I	ATGCAT	1 cut(s)	745

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.