Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0011878

Physical Location & Seq

Genomic Coordinates Reverse (-)

63204108 .. 63208895

Gene Structure 4788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG457100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGGACACGAAGCTGGCGCCGGGGCTCTCCCGGAAGTTGAAGAAGGTTCTGGACTGCCGCACCGACTCTCCCGACGTGCTCTCCTCCCTCAACACTCTCTCATCCTTCTATGCCGAAAATACCCCTCAGTCGCGGCGCAATCTCAGATCGAGCATCGAGAAGCGAGGCCTCTCCATCAACGTCGATTTCCTCGAGGCGTCGCGTGCGGCGCAGCAGGCCCTGGATCGCGTGGAGGACGAGGTCAATGCCTTGGCCAATTGCTGCGACAAGATCGCCAAGGCTCTCAACAGCTGCAGTGCCACCACCGGTGACATTATCACCACCACCGAGCGGCTCAAGCAGGAGCTTAATGTCACCACTCAACGGCAGCAGATCGTCTCCTGCTTCCTCCGCGATTACCAGCTCTCCAACCAAGAGATCAATGCTTTGAGGGAGGAAGAACTGAACGAGGACTTCTTCAAGGCGCTCTCTCACGTTCAGGAAATTCATGCTAATTGTAAACTGCTACTGAGGACTCATCACCAGCGTGCTGGTCTAGAGCTCATGGATATGATGGCCGTGTACCAAGAGGGAGCTTATGAACGCCTCTGCAGGTGGGTTCAGGCGGAATGTAGGCAGCTTGGTGACTCTGATAATCCTCAAGTTAGTGATCTTTTGAGAACCGCTGTTCGTTGCCTCAAGGAAAGGCCTGTGCTTTTTAAGTACTGTGCAGAAGAGGTAGCGAATATGAGGCACAATGCATTGTTCAGACGGTTTATCAGTGCTCTTACACGTGGAGGACCTGGAGGAGTGCCGCGACCTATTGAAGTTCATGCTCATGATCCATTACGATATGTTGGGGATATGCTCGGGTGGTTACATCAGGCCCTGGCATCTGAACGTGAACTTGTACTTGCGCTACTTGATCCAGATTCTATTGCTGATAGTCCAACCACAAACCAAATGTCCAAGAGCCAAGAAAGTGATTCTCAGAAGACAGAGTCTGATATTACATTTGTTCTGGATAGAATATTTGAAGGAGTTTGCCGTCCATTTAAATTGAGAGTTGAACAAGTTTTGCAGTCTCAATCCAGTCTCATAATTTCATATAAACTAAGTAACACCCTGGAGTTTTACAGTTACACTATATCAGATTTGCTTGGGAGAGATACAGCTTTATCTAATACCCTGTGGACACTGAAAGATGCTGCTCAGAAAACTTTTTTTGATATTTTGAAAACCCGGGGGGAAAAGCTTTTGAGGTATCCTCCCCTAGTTGCTGTTGACCTTTCTCCACCCCCAGCAGTAAGAGAAGGAGTCTCTGTGCTGCTTGAATTAGTTGAGACCCATTACAGCATGATGCTTCAGAAAAAGCCTCCTTTCGATCCAGTCATATCTGCTTTACTCGATCCAATTATTCAGGTGTGTTTATGTGGACATTTGATCTATAAATGGCATAATATTAAAGTTGCTGCGGTATCACAATACTTAAAACAACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006891 GO:0008150 GO:0008152 GO:0012505 GO:0016192 GO:0017119 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048193 GO:0051179 GO:0051234 GO:0070085 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG6

Protein Analysis

493

Amino Acids

55.8

Weight (kDa)

6.48

Isoelectric Point (pI)

51.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG6_N	PF06419	33 - 145	2.2e-30	Conserved oligomeric complex COG6, N-terminal
COG6_C	PF20653	175 - 469	3e-109	Conserved Oligomeric Golgi complex subunit 6, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31780
fragaria_vesca	FvH4_2g37280 FvH4_2g37280
malus_domestica	MD13G1243800.v1.1 MD13G1243900.v1.1 MD13G1244000.v1.1
prunus_persica	Prupe.1G077200_v2.0.a1
pyrus_communis	pycom13g21520 pycom16g21010
rosa_chinensis	RchiOBHm_Chr6g0304421
rosa_laevigata	RLG00000010980
rosa_multiflora	Rmu_ssc0000218.1_g000049
rosa_roxburghii	Rroxscaffold_7G00163750
rosa_rugosa	Rorug06G0331400
rosa_samantha	Rh6AG444300 Rh6BG458100 Rh6CG457100 Rh6DG443800
rosa_wichuraiana	Rw6G038570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	582
AbsI	CCTCGAGG	1 cut(s)	191
Acc36I	ACCTGC	1 cut(s)	582
AccB1I	GGYRCC	1 cut(s)	16
AccBSI	CCGCTC	1 cut(s)	331
AccII	CGCG	5 cut(s)	133, 202, 228, 393, 796
AciI	CCGC	9 cut(s)	58, 133, 206, 331, 391, 605, 663, 794, 1454
AclWI	GGATC	5 cut(s)	231, 815, 899, 1358, 1382
AcoI	YGGCCR	2 cut(s)	252, 555
AcsI	RAATTY	1 cut(s)	483
AcuI	CTGAAG	1 cut(s)	1328
AcvI	CACGTG	1 cut(s)	773
AcyI	GRCGYC	2 cut(s)	17, 197
AfaI	GTAC	3 cut(s)	563, 704, 891
AfiI	CCNNNNNNNGG	2 cut(s)	330, 363
AflIII	ACRYGT	1 cut(s)	770
AgeI	ACCGGT	1 cut(s)	305
AgsI	TTSAA	7 cut(s)	40, 460, 806, 1016, 1049, 1216, 1313
AjiI	CACGTC	1 cut(s)	76
AjnI	CCWGG	4 cut(s)	219, 781, 867, 1104
AleI	CACNNNNGTG	1 cut(s)	525
AluBI	AGCT	9 cut(s)	13, 291, 346, 403, 541, 575, 619, 1154, 1234
AluI	AGCT	9 cut(s)	13, 291, 346, 403, 541, 575, 619, 1154, 1234
Alw21I	GWGCWC	3 cut(s)	81, 543, 766
Alw26I	GTCTC	5 cut(s)	382, 1068, 1079, 1303, 1316
AlwI	GGATC	5 cut(s)	231, 815, 899, 1358, 1382
AlwNI	CAGNNNCTG	3 cut(s)	220, 868, 983
Ama87I	CYCGRG	3 cut(s)	191, 848, 1221
AoxI	GGCC	6 cut(s)	166, 216, 252, 555, 686, 864
ApeKI	GCWGC	8 cut(s)	211, 261, 291, 367, 616, 1187, 1306, 1451
ApoI	RAATTY	1 cut(s)	483
ArsI	GACNNNNNNTTYG	2 cut(s)	929, 961
AsiGI	ACCGGT	1 cut(s)	305
AspLEI	GCGC	5 cut(s)	19, 138, 211, 466, 898
AspS9I	GGNCC	3 cut(s)	217, 779, 865
AsuC2I	CCSGG	4 cut(s)	21, 31, 1222, 1223
AsuHPI	GGTGA	5 cut(s)	310, 320, 346, 512, 635
AvaI	CYCGRG	3 cut(s)	191, 848, 1221
AvaII	GGWCC	1 cut(s)	779
BalI	TGGCCA	1 cut(s)	254
BanI	GGYRCC	1 cut(s)	16
BanII	GRGCYC	2 cut(s)	27, 543
BbrPI	CACGTG	1 cut(s)	773
BbsI	GAAGAC	1 cut(s)	980
Bbv12I	GWGCWC	3 cut(s)	81, 543, 766
BbvI	GCAGC	8 cut(s)	223, 248, 278, 379, 628, 1174, 1293, 1438
BccI	CCATC	2 cut(s)	182, 547
BceAI	ACGGC	3 cut(s)	380, 542, 1011
BcgI	CGANNNNNNTGC	2 cut(s)	227, 261
BciT130I	CCWGG	4 cut(s)	221, 783, 869, 1106
BciVI	GTATCC	1 cut(s)	1254
BcnI	CCSGG	4 cut(s)	21, 31, 1222, 1223
BcoDI	GTCTC	5 cut(s)	382, 1068, 1079, 1303, 1316
BfaI	CTAG	2 cut(s)	536, 1253
BfmI	CTRYAG	2 cut(s)	292, 589
BfoI	RGCGCY	2 cut(s)	20, 467
BfuAI	ACCTGC	1 cut(s)	582
BfuI	GTATCC	1 cut(s)	1254
BmcAI	AGTACT	1 cut(s)	704
Bme1390I	CCNGG	8 cut(s)	21, 31, 221, 783, 869, 1106, 1222, 1223
Bme18I	GGWCC	1 cut(s)	779
BmeT110I	CYCGRG	3 cut(s)	191, 848, 1221
BmgBI	CACGTC	1 cut(s)	76
BmgT120I	GGNCC	3 cut(s)	217, 779, 865
BmiI	GGNNCC	1 cut(s)	18
BmrFI	CCNGG	8 cut(s)	21, 31, 221, 783, 869, 1106, 1222, 1223
BmsI	GCATC	4 cut(s)	162, 881, 1174, 1329
BpiI	GAAGAC	1 cut(s)	980
BplI	GAGNNNNNCTC	2 cut(s)	1231, 1263
BpmI	CTGGAG	2 cut(s)	804, 1127
BpuEI	CTTGAG	3 cut(s)	320, 624, 662
BpuMI	CCSGG	4 cut(s)	21, 31, 1222, 1223
BsaAI	YACGTR	1 cut(s)	773
BsaHI	GRCGYC	2 cut(s)	17, 197
BsaI	GGTCTC	1 cut(s)	1316
BsaJI	CCNNGG	8 cut(s)	20, 219, 249, 276, 867, 1104, 1221, 1222
BsaWI	WCCGGW	1 cut(s)	305
BsaXI	ACNNNNNCTCC	8 cut(s)	52, 65, 82, 95, 389, 419, 1287, 1317
Bsc4I	CCNNNNNNNGG	2 cut(s)	330, 363
Bse118I	RCCGGY	1 cut(s)	305
Bse1I	ACTGG	2 cut(s)	1071, 1367
BseBI	CCWGG	4 cut(s)	221, 783, 869, 1106
BseDI	CCNNGG	8 cut(s)	20, 219, 249, 276, 867, 1104, 1221, 1222
BseGI	GGATG	1 cut(s)	101
BseLI	CCNNNNNNNGG	2 cut(s)	330, 363
BseMII	CTCAG	5 cut(s)	140, 157, 500, 983, 1205
BseNI	ACTGG	2 cut(s)	1071, 1367
BseRI	GAGGAG	2 cut(s)	73, 801
BseXI	GCAGC	8 cut(s)	223, 248, 278, 379, 628, 1174, 1293, 1438
BseYI	CCCAGC	1 cut(s)	1279
BsgI	GTGCAG	1 cut(s)	729
Bsh1236I	CGCG	5 cut(s)	133, 202, 228, 393, 796
BshFI	GGCC	6 cut(s)	168, 218, 254, 557, 688, 866
BshNI	GGYRCC	1 cut(s)	16
BshTI	ACCGGT	1 cut(s)	305
BsiHKAI	GWGCWC	3 cut(s)	81, 543, 766
BsiHKCI	CYCGRG	3 cut(s)	191, 848, 1221
BsiSI	CCGG	4 cut(s)	20, 31, 306, 1222
BslI	CCNNNNNNNGG	2 cut(s)	330, 363
BsmAI	GTCTC	5 cut(s)	382, 1068, 1079, 1303, 1316
BsmBI	CGTCTC	1 cut(s)	382
BsnI	GGCC	6 cut(s)	168, 218, 254, 557, 688, 866
Bso31I	GGTCTC	1 cut(s)	1316
BsoBI	CYCGRG	3 cut(s)	191, 848, 1221
Bsp1286I	GDGCHC	4 cut(s)	27, 81, 543, 766
BspACI	CCGC	9 cut(s)	58, 133, 206, 331, 391, 605, 663, 794, 1454
BspANI	GGCC	6 cut(s)	168, 218, 254, 557, 688, 866
BspCNI	CTCAG	5 cut(s)	139, 156, 501, 982, 1204
BspFNI	CGCG	5 cut(s)	133, 202, 228, 393, 796
BspHI	TCATGA	1 cut(s)	817
BspLI	GGNNCC	1 cut(s)	18
BspMAI	CTGCAG	2 cut(s)	296, 593
BspMI	ACCTGC	1 cut(s)	582
BspPI	GGATC	5 cut(s)	231, 815, 899, 1358, 1382
BspT107I	GGYRCC	1 cut(s)	16
BspTNI	GGTCTC	1 cut(s)	1316
BsrBI	CCGCTC	1 cut(s)	331
BsrFI	RCCGGY	1 cut(s)	305
BsrI	ACTGG	2 cut(s)	1071, 1367
BssAI	RCCGGY	1 cut(s)	305
BssECI	CCNNGG	8 cut(s)	20, 219, 249, 276, 867, 1104, 1221, 1222
BssNI	GRCGYC	2 cut(s)	17, 197
BssT1I	CCWWGG	2 cut(s)	249, 276
Bst2UI	CCWGG	4 cut(s)	221, 783, 869, 1106
Bst4CI	ACNGT	3 cut(s)	707, 753, 1118
Bst6I	CTCTTC	1 cut(s)	708
BstACI	GRCGYC	2 cut(s)	17, 197
BstBAI	YACGTR	1 cut(s)	773
BstC8I	GCNNGC	4 cut(s)	15, 204, 216, 528
BstDEI	CTNAG	6 cut(s)	126, 143, 509, 969, 1094, 1191
BstF5I	GGATG	1 cut(s)	101
BstFNI	CGCG	5 cut(s)	133, 202, 228, 393, 796
BstH2I	RGCGCY	2 cut(s)	20, 467
BstHHI	GCGC	5 cut(s)	19, 138, 211, 466, 898
BstMAI	GTCTC	5 cut(s)	382, 1068, 1079, 1303, 1316
BstMWI	GCNNNNNNNGC	5 cut(s)	203, 208, 215, 337, 390
BstNI	CCWGG	4 cut(s)	221, 783, 869, 1106
BstSCI	CCNGG	8 cut(s)	19, 29, 219, 781, 867, 1104, 1220, 1221
BstSFI	CTRYAG	2 cut(s)	292, 589
BstUI	CGCG	5 cut(s)	133, 202, 228, 393, 796
BstV1I	GCAGC	8 cut(s)	223, 248, 278, 379, 628, 1174, 1293, 1438
BstV2I	GAAGAC	1 cut(s)	980
BstXI	CCANNNNNNTGG	1 cut(s)	530
BsuI	GTATCC	1 cut(s)	1254
BsuRI	GGCC	6 cut(s)	168, 218, 254, 557, 688, 866
BtrI	CACGTC	1 cut(s)	76
BtsCI	GGATG	1 cut(s)	101
BtsI	GCAGTG	1 cut(s)	301
BtsIMutI	CAGTG	3 cut(s)	301, 766, 1175
BveI	ACCTGC	1 cut(s)	582
Cac8I	GCNNGC	4 cut(s)	15, 204, 216, 528
CaiI	CAGNNNCTG	3 cut(s)	220, 868, 983
CciI	TCATGA	1 cut(s)	817
CfoI	GCGC	5 cut(s)	19, 138, 211, 466, 898
Cfr10I	RCCGGY	1 cut(s)	305
Cfr13I	GGNCC	3 cut(s)	217, 779, 865
Cfr9I	CCCGGG	1 cut(s)	1221
CseI	GACGC	1 cut(s)	186
Csp6I	GTAC	3 cut(s)	562, 703, 890
CspAI	ACCGGT	1 cut(s)	305
CviAII	CATG	5 cut(s)	488, 544, 812, 818, 1336
CviQI	GTAC	3 cut(s)	562, 703, 890
DdeI	CTNAG	6 cut(s)	126, 143, 509, 969, 1094, 1191
DinI	GGCGCC	1 cut(s)	18
DraI	TTTAAA	1 cut(s)	1036
EaeI	YGGCCR	2 cut(s)	252, 555
Eam1104I	CTCTTC	1 cut(s)	708
EarI	CTCTTC	1 cut(s)	708
EciI	GGCGGA	1 cut(s)	620
Ecl136II	GAGCTC	1 cut(s)	541
Eco130I	CCWWGG	2 cut(s)	249, 276
Eco147I	AGGCCT	2 cut(s)	168, 688
Eco24I	GRGCYC	2 cut(s)	27, 543
Eco31I	GGTCTC	1 cut(s)	1316
Eco47I	GGWCC	1 cut(s)	779
Eco53kI	GAGCTC	1 cut(s)	541
Eco57I	CTGAAG	1 cut(s)	1328
Eco72I	CACGTG	1 cut(s)	773
Eco88I	CYCGRG	3 cut(s)	191, 848, 1221
EcoICRI	GAGCTC	1 cut(s)	541
EcoO109I	RGGNCCY	3 cut(s)	217, 779, 865
EcoRII	CCWGG	4 cut(s)	219, 781, 867, 1104
EcoT14I	CCWWGG	2 cut(s)	249, 276
EcoT22I	ATGCAT	1 cut(s)	742
EcoT38I	GRGCYC	2 cut(s)	27, 543
EgeI	GGCGCC	1 cut(s)	18
EheI	GGCGCC	1 cut(s)	18
ErhI	CCWWGG	2 cut(s)	249, 276
Esp3I	CGTCTC	1 cut(s)	382
FaeI	CATG	5 cut(s)	491, 547, 815, 821, 1339
FatI	CATG	5 cut(s)	487, 543, 811, 817, 1335
FokI	GGATG	1 cut(s)	88
FriOI	GRGCYC	2 cut(s)	27, 543
FspBI	CTAG	2 cut(s)	536, 1253
GlaI	GCGC	5 cut(s)	18, 137, 210, 465, 897
GsaI	CCCAGC	1 cut(s)	1283
GsuI	CTGGAG	2 cut(s)	804, 1127
HaeII	RGCGCY	2 cut(s)	20, 467
HaeIII	GGCC	6 cut(s)	168, 218, 254, 557, 688, 866
HapII	CCGG	4 cut(s)	20, 31, 306, 1222
HgaI	GACGC	1 cut(s)	186
HhaI	GCGC	5 cut(s)	19, 138, 211, 466, 898
Hin1I	GRCGYC	2 cut(s)	17, 197
Hin1II	CATG	5 cut(s)	491, 547, 815, 821, 1339
Hin6I	GCGC	5 cut(s)	17, 136, 209, 464, 896
HinP1I	GCGC	5 cut(s)	17, 136, 209, 464, 896
HincII	GTYRAC	1 cut(s)	1264
HindII	GTYRAC	1 cut(s)	1264
HindIII	AAGCTT	1 cut(s)	1232
HinfI	GANTC	7 cut(s)	65, 514, 626, 911, 965, 980, 1296
HpaII	CCGG	4 cut(s)	20, 31, 306, 1222
HphI	GGTGA	5 cut(s)	310, 320, 346, 512, 635
Hpy166II	GTNNAC	6 cut(s)	500, 562, 884, 1173, 1264, 1415
Hpy188I	TCNGA	9 cut(s)	146, 631, 749, 877, 972, 985, 1132, 1194, 1347
Hpy188III	TCNNGA	8 cut(s)	50, 71, 157, 479, 536, 818, 908, 1001
Hpy8I	GTNNAC	6 cut(s)	500, 562, 884, 1173, 1264, 1415
Hpy99I	CGWCG	3 cut(s)	77, 185, 202
HpyAV	CCTTC	4 cut(s)	37, 115, 1010, 1286
HpyCH4III	ACNGT	3 cut(s)	707, 753, 1118
HpyCH4IV	ACGT	5 cut(s)	75, 180, 474, 772, 880
HpyCH4V	TGCA	5 cut(s)	294, 591, 710, 740, 1060
HpyF10VI	GCNNNNNNNGC	5 cut(s)	203, 208, 215, 337, 390
HpyF3I	CTNAG	6 cut(s)	126, 143, 509, 969, 1094, 1191
HpySE526I	ACGT	5 cut(s)	75, 180, 474, 772, 880
Hsp92I	GRCGYC	2 cut(s)	17, 197
Hsp92II	CATG	5 cut(s)	491, 547, 815, 821, 1339
HspAI	GCGC	5 cut(s)	17, 136, 209, 464, 896
KasI	GGCGCC	1 cut(s)	16
LmnI	GCTCC	2 cut(s)	343, 572
Lsp1109I	GCAGC	8 cut(s)	223, 248, 278, 379, 628, 1174, 1293, 1438
LweI	GCATC	4 cut(s)	162, 881, 1174, 1329
MaeI	CTAG	2 cut(s)	536, 1253
MaeII	ACGT	5 cut(s)	75, 180, 474, 772, 880
MaeIII	GTNAC	6 cut(s)	308, 352, 623, 855, 1097, 1118
MbiI	CCGCTC	1 cut(s)	331
MboII	GAAGA	5 cut(s)	52, 448, 449, 725, 985
MfeI	CAATTG	1 cut(s)	256
MhlI	GDGCHC	4 cut(s)	27, 81, 543, 766
MlsI	TGGCCA	1 cut(s)	254
MluCI	AATT	7 cut(s)	256, 483, 493, 1037, 1080, 1313, 1392
MluNI	TGGCCA	1 cut(s)	254
Mly113I	GGCGCC	1 cut(s)	17
MlyI	GAGTC	5 cut(s)	59, 508, 620, 989, 1305
MmeI	TCCRAC	2 cut(s)	432, 953
Mox20I	TGGCCA	1 cut(s)	254
Mph1103I	ATGCAT	1 cut(s)	742
MscI	TGGCCA	1 cut(s)	254
MseI	TTAA	5 cut(s)	348, 699, 1035, 1443, 1469
MslI	CAYNNNNRTG	3 cut(s)	525, 548, 816
Msp20I	TGGCCA	1 cut(s)	254
MspA1I	CMGCKG	2 cut(s)	291, 665
MspI	CCGG	4 cut(s)	20, 31, 306, 1222
MspR9I	CCNGG	8 cut(s)	21, 31, 221, 783, 869, 1106, 1222, 1223
MunI	CAATTG	1 cut(s)	256
MvaI	CCWGG	4 cut(s)	221, 783, 869, 1106
MvnI	CGCG	5 cut(s)	133, 202, 228, 393, 796
MwoI	GCNNNNNNNGC	5 cut(s)	203, 208, 215, 337, 390
NarI	GGCGCC	1 cut(s)	17
NciI	CCSGG	4 cut(s)	21, 31, 1222, 1223
NlaIII	CATG	5 cut(s)	491, 547, 815, 821, 1339
NlaIV	GGNNCC	1 cut(s)	18
NmuCI	GTSAC	3 cut(s)	308, 352, 623
NsiI	ATGCAT	1 cut(s)	742
OliI	CACNNNNGTG	1 cut(s)	525
PaeR7I	CTCGAG	1 cut(s)	191
PagI	TCATGA	1 cut(s)	817
PaqCI	CACCTGC	1 cut(s)	582
PceI	AGGCCT	2 cut(s)	168, 688
PcsI	WCGNNNNNNNCGW	1 cut(s)	189
PfeI	GAWTC	2 cut(s)	911, 965
PflFI	GACNNNGTC	2 cut(s)	239, 979
PfoI	TCCNGGA	1 cut(s)	29
PinAI	ACCGGT	1 cut(s)	305
PleI	GAGTC	5 cut(s)	59, 508, 620, 988, 1304
PluTI	GGCGCC	1 cut(s)	20
PmaCI	CACGTG	1 cut(s)	773
PmlI	CACGTG	1 cut(s)	773
PpsI	GAGTC	5 cut(s)	59, 508, 620, 988, 1304
Ppu21I	YACGTR	1 cut(s)	773
PpuMI	RGGWCCY	1 cut(s)	779
Psp124BI	GAGCTC	1 cut(s)	543
Psp5II	RGGWCCY	1 cut(s)	779
Psp6I	CCWGG	4 cut(s)	219, 781, 867, 1104
PspCI	CACGTG	1 cut(s)	773
PspFI	CCCAGC	1 cut(s)	1279
PspGI	CCWGG	4 cut(s)	219, 781, 867, 1104
PspN4I	GGNNCC	1 cut(s)	18
PspPI	GGNCC	3 cut(s)	217, 779, 865
PspPPI	RGGWCCY	1 cut(s)	779
PspXI	VCTCGAGB	1 cut(s)	191
PstI	CTGCAG	2 cut(s)	296, 593
PstNI	CAGNNNCTG	3 cut(s)	220, 868, 983
PsyI	GACNNNGTC	2 cut(s)	239, 979
PvuII	CAGCTG	1 cut(s)	291
RsaI	GTAC	3 cut(s)	563, 704, 891
RsaNI	GTAC	3 cut(s)	562, 703, 890
RseI	CAYNNNNRTG	3 cut(s)	525, 548, 816
SacI	GAGCTC	1 cut(s)	543
SaqAI	TTAA	5 cut(s)	348, 699, 1035, 1443, 1469
Sau96I	GGNCC	3 cut(s)	217, 779, 865
ScaI	AGTACT	1 cut(s)	704
SchI	GAGTC	5 cut(s)	59, 508, 620, 989, 1305
ScrFI	CCNGG	8 cut(s)	21, 31, 221, 783, 869, 1106, 1222, 1223
SduI	GDGCHC	4 cut(s)	27, 81, 543, 766
SfaNI	GCATC	4 cut(s)	162, 881, 1174, 1329
SfcI	CTRYAG	2 cut(s)	292, 589
SfoI	GGCGCC	1 cut(s)	18
Sfr274I	CTCGAG	1 cut(s)	191
SgrAI	CRCCGGYG	1 cut(s)	305
SinI	GGWCC	1 cut(s)	779
SlaI	CTCGAG	1 cut(s)	191
SmaI	CCCGGG	1 cut(s)	1223
SmiI	ATTTAAAT	1 cut(s)	1036
SmiMI	CAYNNNNRTG	3 cut(s)	525, 548, 816
SmlI	CTYRAG	4 cut(s)	191, 335, 639, 677
SmoI	CTYRAG	4 cut(s)	191, 335, 639, 677
Sse9I	AATT	7 cut(s)	256, 483, 493, 1037, 1080, 1313, 1392
SseBI	AGGCCT	2 cut(s)	168, 688
SsiI	CCGC	9 cut(s)	58, 133, 206, 331, 391, 605, 663, 794, 1454
SspDI	GGCGCC	1 cut(s)	16
SspI	AATATT	2 cut(s)	1011, 1441
SspMI	CTAG	2 cut(s)	536, 1253
SstI	GAGCTC	1 cut(s)	543
StuI	AGGCCT	2 cut(s)	168, 688
StyD4I	CCNGG	8 cut(s)	19, 29, 219, 781, 867, 1104, 1220, 1221
StyI	CCWWGG	2 cut(s)	249, 276
SwaI	ATTTAAAT	1 cut(s)	1036
TaaI	ACNGT	3 cut(s)	707, 753, 1118
TaiI	ACGT	5 cut(s)	78, 183, 477, 775, 883
TaqI	TCGA	6 cut(s)	149, 156, 183, 192, 1362, 1386
TasI	AATT	7 cut(s)	256, 483, 493, 1037, 1080, 1313, 1392
TatI	WGTACW	2 cut(s)	702, 889
TauI	GCSGC	5 cut(s)	60, 136, 209, 334, 796
TfiI	GAWTC	2 cut(s)	911, 965
Tru1I	TTAA	5 cut(s)	348, 699, 1035, 1443, 1469
Tru9I	TTAA	5 cut(s)	348, 699, 1035, 1443, 1469
TscAI	CASTG	3 cut(s)	301, 766, 1182
TseFI	GTSAC	3 cut(s)	308, 352, 623
TseI	GCWGC	8 cut(s)	211, 261, 291, 367, 616, 1187, 1306, 1451
Tsp45I	GTSAC	3 cut(s)	308, 352, 623
TspDTI	ATGAA	4 cut(s)	476, 594, 800, 1074
TspMI	CCCGGG	1 cut(s)	1221
TspRI	CASTG	3 cut(s)	301, 766, 1182
Tth111I	GACNNNGTC	2 cut(s)	239, 979
VpaK11BI	GGWCC	1 cut(s)	779
XapI	RAATTY	1 cut(s)	483
XbaI	TCTAGA	1 cut(s)	535
XhoI	CTCGAG	1 cut(s)	191
XmaI	CCCGGG	1 cut(s)	1221
XspI	CTAG	2 cut(s)	536, 1253
ZrmI	AGTACT	1 cut(s)	704
Zsp2I	ATGCAT	1 cut(s)	742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.