AT1G32330

transcription factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
11656964 .. 11660471
3508 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G32330.2

Sequence Viewer

Length: 1458 bp
ATGGATGTGAGCAAAGTAACCACAAGCGACGGCGGAGGAGATTCAATGGAGACTAAGCCATCTCCTCAACCTCAGCCTGCGGCGATTCTAAGTTCAAACGCGCCTCCTCCGTTTCTGAGCAAGACCTATGATATGGTTGATGATCACAATACAGATTCGATTGTCTCTTGGAGTGCTAATAACAACAGTTTTATCGTTTGGAAACCACCGGAGTTCGCTCGCGATCTTCTTCCTAAGAACTTTAAGCATAATAATTTCTCCAGCTTCGTTAGACAGCTTAATACCTATGGTTTCAGGAAGGTTGACCCAGATAGATGGGAATTTGCGAATGAAGGTTTTTTAAGAGGTCAGAAGCACTTGCTACAATCAATAACTAGGCGAAAACCTGCCCATGGACAGGGACAGGGACATCAGCGATCTCAGCACTCGAATGGACAGAACTCATCTGTTAGCGCATGTGTTGAAGTTGGCAAATTTGGTCTCGAAGAAGAAGTTGAAAGGCTTAAAAGAGATAAGAACGTCCTTATGCAAGAACTCGTCAGATTAAGACAGCAGCAACAGTCCACTGATAACCAACTTCAAACGATGGTTCAGCGTCTCCAGGGCATGGAGAATCGGCAACAACAATTAATGTCATTCCTTGCAAAGGCAGTACAAAGCCCTCATTTTCTATCTCAATTCTTACAGCAGCAGAATCAGCAAAACGAGAGTAATAGGCGCATCAGTGATACCAGTAAGAAGCGGAGATTCAAGCGAGACGGCATTGTCCGTAATAATGATTCTGCTACTCCTGATGGACAGATAGTGAAGTATCAACCTCCAATGCACGAGCAAGCCAAAGCAATGTTTAAACAGCTTATGAAGATGGAACCTTACAAAACCGGCGATGATGGTTTCCTTCTAGGTAATGGTACGTCTACTACCGAGGGAACAGAGATGGAGACTTCATCAAACCAAGTATCGGGTATAACTCTTAAGGAAATGCCTACAGCTTCTGAGATACAGTCATCATCACCAATTGAAACAACTCCTGAAAATGTTTCGGCAGCATCAGAAGCAACCGAGAACTGTATTCCTTCACCTGATGATCTAACTCTTCCCGACTTCACTCATATGCTACCGGAAAATAATTCAGAGAAGCCTCCAGAGAGTTTCATGGAACCAAACCTGGGAGGTTCTAGTCCATTACTAGATCCAGATCTGTTGATCGATGATTCTTTGTCCTTCGACATTGACGACTTTCCAATGGATTCTGATATAGACCCTGTTGATTACGGTTTACTCGAACGCTTACTCATGTCAAGCCCGGTTCCAGATAATATGGATTCAACACCAGTGGACAATGAAACAGAGCAGGAACAAAATGGATGGGACAAAACTAAGCATATGGATAATCTGACTCAACAGATGGGTCTCCTCTCTCCTGAAACCTTAGATCTCTCAAGGCAAAATCCTTGA

Protein Analysis

485

Amino Acids

54.52

Weight (kDa)

4.87

Isoelectric Point (pI)

60.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSF_DNA-bind PF00447 38 - 127 1.3e-29 HSF-type DNA-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012798)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 764
Acc36I ACCTGC 1 cut(s) 394
AccB7I CCANNNNNTGG 1 cut(s) 607
AccI GTMKAC 1 cut(s) 917
AccII CGCG 2 cut(s) 101, 222
AciI CCGC 3 cut(s) 33, 80, 742
AclWI GGATC 1 cut(s) 1187
AcsI RAATTY 2 cut(s) 320, 473
AfaI GTAC 2 cut(s) 654, 913
AfiI CCNNNNNNNGG 6 cut(s) 392, 397, 607, 646, 961, 1169
AflII CTTAAG 1 cut(s) 974
AgsI TTSAA 8 cut(s) 45, 96, 464, 497, 581, 751, 1022, 1329
AjnI CCWGG 2 cut(s) 600, 1167
AluBI AGCT 4 cut(s) 264, 277, 856, 992
AluI AGCT 4 cut(s) 264, 277, 856, 992
Alw26I GTCTC 7 cut(s) 44, 169, 485, 602, 750, 935, 1418
AlwI GGATC 1 cut(s) 1187
AlwNI CAGNNNCTG 1 cut(s) 995
ApeKI GCWGC 3 cut(s) 553, 688, 1046
ApoI RAATTY 2 cut(s) 320, 473
AseI ATTAAT 1 cut(s) 629
AspLEI GCGC 3 cut(s) 103, 455, 720
AsuC2I CCSGG 1 cut(s) 1307
AsuHPI GGTGA 2 cut(s) 1005, 1071
BauI CACGAG 1 cut(s) 827
BbvCI CCTCAGC 1 cut(s) 72
BbvI GCAGC 3 cut(s) 565, 700, 1058
BccI CCATC 9 cut(s) 67, 309, 580, 788, 859, 884, 931, 1362, 1402
BceAI ACGGC 2 cut(s) 46, 775
BciT130I CCWGG 2 cut(s) 602, 1169
BclI TGATCA 1 cut(s) 142
BcnI CCSGG 1 cut(s) 1307
BcoDI GTCTC 7 cut(s) 44, 169, 485, 602, 750, 935, 1418
BfaI CTAG 4 cut(s) 375, 902, 1179, 1190
BfmI CTRYAG 1 cut(s) 987
BfrI CTTAAG 1 cut(s) 974
BfuAI ACCTGC 1 cut(s) 394
BglII AGATCT 2 cut(s) 1198, 1435
BisI GCNGC 4 cut(s) 81, 554, 689, 1047
BlsI GCNGC 4 cut(s) 82, 555, 690, 1048
Bme1390I CCNGG 3 cut(s) 602, 1169, 1307
BmiI GGNNCC 3 cut(s) 870, 1161, 1311
BmrFI CCNGG 3 cut(s) 602, 1169, 1307
BmsI GCATC 2 cut(s) 729, 1058
BpmI CTGGAG 3 cut(s) 244, 584, 1128
Bpu10I CCTNAGC 1 cut(s) 72
BpuEI CTTGAG 1 cut(s) 1426
BpuMI CCSGG 1 cut(s) 1307
Bsa29I ATCGAT 1 cut(s) 1209
BsaBI GATNNNNATC 1 cut(s) 1197
BsaI GGTCTC 2 cut(s) 485, 1418
BsaJI CCNNGG 4 cut(s) 391, 601, 924, 1168
BsaWI WCCGGW 2 cut(s) 208, 1120
Bsc4I CCNNNNNNNGG 6 cut(s) 392, 397, 607, 646, 961, 1169
Bse118I RCCGGY 1 cut(s) 881
Bse1I ACTGG 2 cut(s) 732, 1334
Bse3DI GCAATG 1 cut(s) 849
Bse8I GATNNNNATC 1 cut(s) 1197
BseBI CCWGG 2 cut(s) 602, 1169
BseCI ATCGAT 1 cut(s) 1209
BseDI CCNNGG 4 cut(s) 391, 601, 924, 1168
BseGI GGATG 2 cut(s) 10, 1373
BseJI GATNNNNATC 1 cut(s) 1197
BseLI CCNNNNNNNGG 6 cut(s) 392, 397, 607, 646, 961, 1169
BseMI GCAATG 1 cut(s) 849
BseMII CTCAG 4 cut(s) 86, 107, 434, 987
BseNI ACTGG 2 cut(s) 732, 1334
BseRI GAGGAG 4 cut(s) 51, 54, 96, 1406
BseXI GCAGC 3 cut(s) 565, 700, 1058
Bsh1236I CGCG 2 cut(s) 101, 222
BshVI ATCGAT 1 cut(s) 1209
BsiSI CCGG 4 cut(s) 209, 882, 1121, 1307
BslFI GGGAC 3 cut(s) 414, 420, 1385
BslI CCNNNNNNNGG 6 cut(s) 392, 397, 607, 646, 961, 1169
BsmAI GTCTC 7 cut(s) 44, 169, 485, 602, 750, 935, 1418
BsmBI CGTCTC 2 cut(s) 602, 750
BsmFI GGGAC 3 cut(s) 414, 420, 1385
Bso31I GGTCTC 2 cut(s) 485, 1418
Bsp143I GATC 8 cut(s) 142, 223, 416, 1087, 1192, 1198, 1206, 1435
Bsp19I CCATGG 1 cut(s) 391
Bsp68I TCGCGA 1 cut(s) 222
BspACI CCGC 3 cut(s) 33, 80, 742
BspCNI CTCAG 4 cut(s) 85, 108, 433, 988
BspDI ATCGAT 1 cut(s) 1209
BspFNI CGCG 2 cut(s) 101, 222
BspLI GGNNCC 3 cut(s) 870, 1161, 1311
BspMI ACCTGC 1 cut(s) 394
BspPI GGATC 1 cut(s) 1187
BspTI CTTAAG 1 cut(s) 974
BspTNI GGTCTC 2 cut(s) 485, 1418
BsrDI GCAATG 1 cut(s) 849
BsrFI RCCGGY 1 cut(s) 881
BsrI ACTGG 2 cut(s) 732, 1334
BssAI RCCGGY 1 cut(s) 881
BssECI CCNNGG 4 cut(s) 391, 601, 924, 1168
BssMI GATC 8 cut(s) 142, 223, 416, 1087, 1192, 1198, 1206, 1435
BssSI CACGAG 1 cut(s) 827
BssT1I CCWWGG 1 cut(s) 391
Bst2BI CACGAG 1 cut(s) 827
Bst2UI CCWGG 2 cut(s) 602, 1169
Bst4CI ACNGT 5 cut(s) 188, 561, 1005, 1070, 1277
Bst6I CTCTTC 1 cut(s) 1101
BstAFI CTTAAG 1 cut(s) 974
BstC8I GCNNGC 3 cut(s) 78, 220, 834
BstDEI CTNAG 9 cut(s) 54, 72, 89, 116, 234, 420, 996, 1380, 1432
BstDSI CCRYGG 1 cut(s) 391
BstENI CCTNNNNNAGG 1 cut(s) 644
BstF5I GGATG 2 cut(s) 10, 1373
BstFNI CGCG 2 cut(s) 101, 222
BstHHI GCGC 3 cut(s) 103, 455, 720
BstKTI GATC 8 cut(s) 145, 226, 419, 1090, 1195, 1201, 1209, 1438
BstMAI GTCTC 7 cut(s) 44, 169, 485, 602, 750, 935, 1418
BstMBI GATC 8 cut(s) 142, 223, 416, 1087, 1192, 1198, 1206, 1435
BstMWI GCNNNNNNNGC 3 cut(s) 421, 697, 1055
BstNI CCWGG 2 cut(s) 602, 1169
BstNSI RCATGY 1 cut(s) 459
BstSCI CCNGG 3 cut(s) 600, 1167, 1305
BstSFI CTRYAG 1 cut(s) 987
BstUI CGCG 2 cut(s) 101, 222
BstV1I GCAGC 3 cut(s) 565, 700, 1058
BstX2I RGATCY 3 cut(s) 1192, 1198, 1435
BstXI CCANNNNNNTGG 1 cut(s) 315
BstYI RGATCY 3 cut(s) 1192, 1198, 1435
Bsu15I ATCGAT 1 cut(s) 1209
BsuTUI ATCGAT 1 cut(s) 1209
BtgI CCRYGG 1 cut(s) 391
BtgZI GCGATG 1 cut(s) 900
BtsCI GGATG 2 cut(s) 10, 1373
BtsIMutI CAGTG 3 cut(s) 564, 730, 1341
BtuMI TCGCGA 1 cut(s) 222
BveI ACCTGC 1 cut(s) 394
Cac8I GCNNGC 3 cut(s) 78, 220, 834
CaiI CAGNNNCTG 1 cut(s) 995
CfoI GCGC 3 cut(s) 103, 455, 720
Cfr10I RCCGGY 1 cut(s) 881
ClaI ATCGAT 1 cut(s) 1209
CseI GACGC 1 cut(s) 584
Csp6I GTAC 2 cut(s) 653, 912
CspCI CAANNNNNGTGG 2 cut(s) 1317, 1352
CviAII CATG 5 cut(s) 392, 456, 607, 1156, 1297
CviQI GTAC 2 cut(s) 653, 912
DdeI CTNAG 9 cut(s) 54, 72, 89, 116, 234, 420, 996, 1380, 1432
DpnI GATC 8 cut(s) 144, 225, 418, 1089, 1194, 1200, 1208, 1437
DpnII GATC 8 cut(s) 142, 223, 416, 1087, 1192, 1198, 1206, 1435
DraI TTTAAA 1 cut(s) 850
DrdI GACNNNNNNGTC 1 cut(s) 764
DseDI GACNNNNNNGTC 1 cut(s) 764
Eam1104I CTCTTC 1 cut(s) 1101
EarI CTCTTC 1 cut(s) 1101
EciI GGCGGA 1 cut(s) 48
Eco130I CCWWGG 1 cut(s) 391
Eco31I GGTCTC 2 cut(s) 485, 1418
EcoNI CCTNNNNNAGG 1 cut(s) 644
EcoRII CCWGG 2 cut(s) 600, 1167
EcoT14I CCWWGG 1 cut(s) 391
ErhI CCWWGG 1 cut(s) 391
Esp3I CGTCTC 2 cut(s) 602, 750
FaeI CATG 5 cut(s) 395, 459, 610, 1159, 1300
FaqI GGGAC 3 cut(s) 414, 420, 1385
FatI CATG 5 cut(s) 391, 455, 606, 1155, 1296
FauNDI CATATG 2 cut(s) 1113, 1386
FbaI TGATCA 1 cut(s) 142
FblI GTMKAC 1 cut(s) 917
Fnu4HI GCNGC 4 cut(s) 81, 554, 689, 1047
FokI GGATG 2 cut(s) 17, 1380
Fsp4HI GCNGC 4 cut(s) 81, 554, 689, 1047
FspBI CTAG 4 cut(s) 375, 902, 1179, 1190
GlaI GCGC 3 cut(s) 102, 454, 719
GluI GCNGC 4 cut(s) 81, 554, 689, 1047
GsuI CTGGAG 3 cut(s) 244, 584, 1128
HapII CCGG 4 cut(s) 209, 882, 1121, 1307
HgaI GACGC 1 cut(s) 584
HhaI GCGC 3 cut(s) 103, 455, 720
Hin1II CATG 5 cut(s) 395, 459, 610, 1159, 1300
Hin6I GCGC 3 cut(s) 101, 453, 718
HinP1I GCGC 3 cut(s) 101, 453, 718
HincII GTYRAC 1 cut(s) 304
HindII GTYRAC 1 cut(s) 304
HpaII CCGG 4 cut(s) 209, 882, 1121, 1307
HphI GGTGA 2 cut(s) 1005, 1071
Hpy166II GTNNAC 5 cut(s) 304, 564, 918, 1280, 1339
Hpy188I TCNGA 8 cut(s) 117, 351, 542, 997, 1054, 1135, 1255, 1398
Hpy8I GTNNAC 5 cut(s) 304, 564, 918, 1280, 1339
Hpy99I CGWCG 1 cut(s) 32
HpyAV CCTTC 5 cut(s) 292, 326, 908, 1086, 1234
HpyCH4III ACNGT 5 cut(s) 188, 561, 1005, 1070, 1277
HpyCH4IV ACGT 2 cut(s) 519, 914
HpyCH4V TGCA 3 cut(s) 529, 644, 826
HpyF10VI GCNNNNNNNGC 3 cut(s) 421, 697, 1055
HpyF3I CTNAG 9 cut(s) 54, 72, 89, 116, 234, 420, 996, 1380, 1432
HpySE526I ACGT 2 cut(s) 519, 914
Hsp92II CATG 5 cut(s) 395, 459, 610, 1159, 1300
HspAI GCGC 3 cut(s) 101, 453, 718
Ksp22I TGATCA 1 cut(s) 142
Kzo9I GATC 8 cut(s) 142, 223, 416, 1087, 1192, 1198, 1206, 1435
Lsp1109I GCAGC 3 cut(s) 565, 700, 1058
LweI GCATC 2 cut(s) 729, 1058
MaeI CTAG 4 cut(s) 375, 902, 1179, 1190
MaeII ACGT 2 cut(s) 519, 914
MaeIII GTNAC 1 cut(s) 16
MalI GATC 8 cut(s) 144, 225, 418, 1089, 1194, 1200, 1208, 1437
MboI GATC 8 cut(s) 142, 223, 416, 1087, 1192, 1198, 1206, 1435
MboII GAAGA 6 cut(s) 218, 221, 497, 500, 874, 1088
MfeI CAATTG 1 cut(s) 1017
MflI RGATCY 3 cut(s) 1192, 1198, 1435
MluCI AATT 7 cut(s) 253, 320, 473, 626, 677, 1017, 1129
MlyI GAGTC 1 cut(s) 1393
MseI TTAA 8 cut(s) 243, 279, 341, 504, 545, 629, 849, 975
MslI CAYNNNNRTG 2 cut(s) 429, 1112
MspCI CTTAAG 1 cut(s) 974
MspI CCGG 4 cut(s) 209, 882, 1121, 1307
MspR9I CCNGG 3 cut(s) 602, 1169, 1307
MssI GTTTAAAC 1 cut(s) 850
MunI CAATTG 1 cut(s) 1017
MvaI CCWGG 2 cut(s) 602, 1169
MvnI CGCG 2 cut(s) 101, 222
MwoI GCNNNNNNNGC 3 cut(s) 421, 697, 1055
NciI CCSGG 1 cut(s) 1307
NcoI CCATGG 1 cut(s) 391
NdeI CATATG 2 cut(s) 1113, 1386
NdeII GATC 8 cut(s) 142, 223, 416, 1087, 1192, 1198, 1206, 1435
NlaIII CATG 5 cut(s) 395, 459, 610, 1159, 1300
NlaIV GGNNCC 3 cut(s) 870, 1161, 1311
NruI TCGCGA 1 cut(s) 222
NspI RCATGY 1 cut(s) 459
PcsI WCGNNNNNNNCGW 2 cut(s) 1233, 1281
PflMI CCANNNNNTGG 1 cut(s) 607
PkrI GCNGC 4 cut(s) 82, 555, 690, 1048
PleI GAGTC 1 cut(s) 1393
PmeI GTTTAAAC 1 cut(s) 850
PpsI GAGTC 1 cut(s) 1393
PshBI ATTAAT 1 cut(s) 629
Psp6I CCWGG 2 cut(s) 600, 1167
PspGI CCWGG 2 cut(s) 600, 1167
PspN4I GGNNCC 3 cut(s) 870, 1161, 1311
PstNI CAGNNNCTG 1 cut(s) 995
PsuI RGATCY 3 cut(s) 1192, 1198, 1435
RruI TCGCGA 1 cut(s) 222
RsaI GTAC 2 cut(s) 654, 913
RsaNI GTAC 2 cut(s) 653, 912
RseI CAYNNNNRTG 2 cut(s) 429, 1112
SaqAI TTAA 8 cut(s) 243, 279, 341, 504, 545, 629, 849, 975
SatI GCNGC 4 cut(s) 81, 554, 689, 1047
Sau3AI GATC 8 cut(s) 142, 223, 416, 1087, 1192, 1198, 1206, 1435
SchI GAGTC 1 cut(s) 1393
ScrFI CCNGG 3 cut(s) 602, 1169, 1307
SfaNI GCATC 2 cut(s) 729, 1058
SfcI CTRYAG 1 cut(s) 987
SmiMI CAYNNNNRTG 2 cut(s) 429, 1112
SmlI CTYRAG 2 cut(s) 974, 1441
SmoI CTYRAG 2 cut(s) 974, 1441
Sse9I AATT 7 cut(s) 253, 320, 473, 626, 677, 1017, 1129
SsiI CCGC 3 cut(s) 33, 80, 742
SspMI CTAG 4 cut(s) 375, 902, 1179, 1190
StyD4I CCNGG 3 cut(s) 600, 1167, 1305
StyI CCWWGG 1 cut(s) 391
TaaI ACNGT 5 cut(s) 188, 561, 1005, 1070, 1277
TaiI ACGT 2 cut(s) 522, 917
TaqI TCGA 6 cut(s) 158, 428, 483, 1209, 1227, 1284
TasI AATT 7 cut(s) 253, 320, 473, 626, 677, 1017, 1129
TatI WGTACW 1 cut(s) 652
TauI GCSGC 1 cut(s) 83
Tru1I TTAA 8 cut(s) 243, 279, 341, 504, 545, 629, 849, 975
Tru9I TTAA 8 cut(s) 243, 279, 341, 504, 545, 629, 849, 975
TscAI CASTG 3 cut(s) 571, 730, 1341
TseI GCWGC 3 cut(s) 553, 688, 1046
TspDTI ATGAA 5 cut(s) 345, 875, 936, 1144, 1359
TspGWI ACGGA 2 cut(s) 99, 758
TspRI CASTG 3 cut(s) 571, 730, 1341
Van91I CCANNNNNTGG 1 cut(s) 607
Vha464I CTTAAG 1 cut(s) 974
VspI ATTAAT 1 cut(s) 629
XagI CCTNNNNNAGG 1 cut(s) 644
XapI RAATTY 2 cut(s) 320, 473
XceI RCATGY 1 cut(s) 459
XmiI GTMKAC 1 cut(s) 917
XspI CTAG 4 cut(s) 375, 902, 1179, 1190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.