RLG00000003012

Heat shock factor protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0012798
Physical Location & Seq
Reverse (-)
43025680 .. 43030077
4398 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003012

Sequence Viewer

Length: 1572 bp
ATGGCCGGTGCTAATAGCAACGCCGACGAGGCACCAGCCGGCGGTGGGGCCCAGGCGGCTGCGGCTGCTGCGGCGGCGGGGGGAGGTTTGGAATCGGTTCCGGCGCCGACGCCGTTATTGAACTCGAACGCGCCGCCGCCGTTCCTGAGCAAGACGTACGACATGGTGGACGACCCGGCGACCGACCCGATTGTGTCGTGGAGCCCCACCAACAACAGCTTCGTGGTTTGGAACCCGCCGGAGTTCGCCAGGGACCTTCTGCCCAAGTACTTCAAGCACAATAACTTCTCCAGTTTCGTCAGGCAGTTGAACACTTATGGATTTAGGAAAGTTGATCCTGACCGCTGGGAATTTGCAAATGAGGGCTTTTTAAGGGGTCAAAAACATCTTCTAAAGAGTATCAACCGGCGAAAACCTGCCCATGGACATGGTCATCAACAGCCACAGCAGCCATCACATGGACAGAGTTCAGTAGCTGCATGTGTAGAGGTTGGGAAGTTTGGTCTCGAGGAAGAGGTTGAGAGGCTTAAAAGGGACAAGAATGTGCTTATGCAGGAACTTATCAGGTTGAGGCAACAGCAACAGTCTACTGATAATCAGCTGCAAACAATGGTCCAACGTCTTCAAGGTATGGAACAGCGGCAGCAACAGATGATGTCATTCCTTGCAAAGGCTGTGCAGAGCCCTGGTTTCTTGAATCAGTTTGTACAGCAGCAAAATGATAGCAATAGGCGCATAACTGAAGCCAATAAGAAAAGGAGACTCAGGGAGGAAGGAATTGCTGAAAACGAGCGTTCTGATACTCCTGATGGACAGATTGTTAAGTATCAGCCTCCGAAGAATGAAGCGGCAAAGGCAATGCTCAGGCAGATGATGAAAACAAATACTTCTTCCCAGCTGGATTCTTTTAGCAACAATCTTGAGAATTTTTTGATTGGTGAGGGTTCATCATCATCCAGTGCAGTAGACAGTGGTAGCTCTTCAAGCCATGTCTCGGGAGCTACACTTCAAGAGGTCCCGCCTACTTCAGGGCGTGGAACGTTACCTGCAATTTCAGAAATAGAATCTTCTCTTAAGGCTACAACCTCTGGAGAAGTTATGAGAGATCCATTGTCAGATATAAATGTCCTCATTGGAGCACAAGAGGCACCAGCAATTCCTATTTCTCAAGCAGATGTGAGCCCTGAGGTTTCTCAGGTACAAGGTATGGCACATGGAGGTTTAATTGATATTCCTGAAGACACAAAACCTGAGGCAGGTGTTGGATTTATTCAAGATATGGCACCTGAAGCCGGTGATGGATTTATCGACTCCACGGCATTTGATTTTATGTCCCTAGATGTTGATAGTATTCCCCCTGATGCTGACATTGACGCATTGCTTGACAATTCCAACTTGTGGGATTTTCTTGAACAAAGTCCTGTGCCAGATGAAATGGATTCGACCTCTGCAGAAGGCATGCCTGTGGGAAATGAAGTGCAGCCGACAGAGAATGGATGGGATAAAACCCAGCACATGGATAAGCTTACTGAGCAAATGGGAAATCTTGAATCAAATACTAAAGGGGTTTGA

Protein Analysis

524

Amino Acids

56.85

Weight (kDa)

4.73

Isoelectric Point (pI)

55.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSF_DNA-bind PF00447 48 - 137 1.7e-30 HSF-type DNA-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012798)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32330 AT1G32330
fragaria_vesca FvH4_5g22720
malus_domestica MD06G1037900.v1.1 MD16G1271200.v1.1
prunus_persica Prupe.5G031100_v2.0.a1
pyrus_communis pycom16g24070
rosa_chinensis RchiOBHm_Chr7g0211291
rosa_laevigata RLG00000003012
rosa_multiflora Rmu_co8434101.1_g000001 Rmu_sc0001226.1_g000001
rosa_roxburghii Rroxscaffold_3G00247950
rosa_rugosa Rorug07G0124900
rosa_samantha Rh7AG257200 Rh7BG251300 Rh7CG274000 Rh7DG264600
rosa_wichuraiana Rw7G021980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1247
Acc36I ACCTGC 3 cut(s) 424, 1054, 1247
AccB1I GGYRCC 4 cut(s) 31, 103, 1147, 1282
AccB7I CCANNNNNTGG 3 cut(s) 458, 1398, 1516
AccI GTMKAC 2 cut(s) 587, 966
AccII CGCG 1 cut(s) 131
AclI AACGTT 1 cut(s) 1040
AclWI GGATC 2 cut(s) 329, 1100
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 350, 925
AcuI CTGAAG 4 cut(s) 762, 1011, 1257, 1308
AcyI GRCGYC 2 cut(s) 104, 110
AfaI GTAC 4 cut(s) 158, 269, 708, 1200
AflII CTTAAG 1 cut(s) 1073
AjnI CCWGG 3 cut(s) 51, 248, 685
AjuI GAANNNNNNNTTGG 2 cut(s) 203, 235
AluBI AGCT 7 cut(s) 219, 476, 601, 898, 978, 1001, 1525
AluI AGCT 7 cut(s) 219, 476, 601, 898, 978, 1001, 1525
Alw21I GWGCWC 1 cut(s) 1141
Alw26I GTCTC 3 cut(s) 509, 754, 997
AlwI GGATC 2 cut(s) 329, 1100
AlwNI CAGNNNCTG 1 cut(s) 476
Ama87I CYCGRG 2 cut(s) 506, 994
AoxI GGCC 2 cut(s) 3, 48
ApaI GGGCCC 1 cut(s) 52
ApeKI GCWGC 9 cut(s) 59, 65, 68, 448, 476, 601, 643, 712, 1480
ApoI RAATTY 2 cut(s) 350, 925
Asp700I GAANNNNTTC 1 cut(s) 96
AspLEI GCGC 3 cut(s) 106, 133, 735
AspS9I GGNCC 5 cut(s) 48, 49, 253, 613, 1015
AsuC2I CCSGG 1 cut(s) 176
AsuHPI GGTGA 2 cut(s) 950, 1307
AvaI CYCGRG 2 cut(s) 506, 994
AvaII GGWCC 3 cut(s) 253, 613, 1015
AxyI CCTNAGG 2 cut(s) 1185, 1251
BaeGI GKGCMC 1 cut(s) 52
BanI GGYRCC 4 cut(s) 31, 103, 1147, 1282
BanII GRGCYC 4 cut(s) 52, 206, 686, 1184
BbsI GAAGAC 2 cut(s) 614, 1245
Bbv12I GWGCWC 1 cut(s) 1141
BbvI GCAGC 9 cut(s) 46, 52, 55, 460, 463, 588, 655, 724, 1492
BccI CCATC 4 cut(s) 460, 803, 1292, 1491
BceAI ACGGC 3 cut(s) 97, 124, 1332
BciT130I CCWGG 3 cut(s) 53, 250, 687
BcnI CCSGG 1 cut(s) 176
BcoDI GTCTC 3 cut(s) 509, 754, 997
BfaI CTAG 1 cut(s) 1337
BfmI CTRYAG 1 cut(s) 1449
BfoI RGCGCY 1 cut(s) 107
BfrI CTTAAG 1 cut(s) 1073
BfuAI ACCTGC 3 cut(s) 424, 1054, 1247
BglI GCCNNNNNGGC 2 cut(s) 29, 56
BmcAI AGTACT 1 cut(s) 269
Bme1390I CCNGG 4 cut(s) 53, 176, 250, 687
Bme18I GGWCC 3 cut(s) 253, 613, 1015
BmeT110I CYCGRG 2 cut(s) 506, 994
BmgT120I GGNCC 5 cut(s) 48, 49, 253, 613, 1015
BmrFI CCNGG 4 cut(s) 53, 176, 250, 687
BmsI GCATC 1 cut(s) 1351
BpiI GAAGAC 2 cut(s) 614, 1245
BpmI CTGGAG 2 cut(s) 274, 1110
Bpu10I CCTNAGC 2 cut(s) 146, 863
BpuEI CTTGAG 2 cut(s) 941, 1152
BpuMI CCSGG 1 cut(s) 176
BsaHI GRCGYC 2 cut(s) 104, 110
BsaI GGTCTC 1 cut(s) 509
BsaJI CCNNGG 5 cut(s) 51, 249, 421, 685, 1314
Bse118I RCCGGY 4 cut(s) 5, 38, 405, 1292
Bse1I ACTGG 2 cut(s) 291, 957
Bse21I CCTNAGG 2 cut(s) 1185, 1251
Bse3DI GCAATG 2 cut(s) 864, 1376
BseBI CCWGG 3 cut(s) 53, 250, 687
BseDI CCNNGG 5 cut(s) 51, 249, 421, 685, 1314
BseGI GGATG 2 cut(s) 953, 1502
BseMI GCAATG 2 cut(s) 864, 1376
BseMII CTCAG 7 cut(s) 137, 778, 877, 1176, 1208, 1242, 1521
BseNI ACTGG 2 cut(s) 291, 957
BseSI GKGCMC 1 cut(s) 52
BseXI GCAGC 9 cut(s) 46, 52, 55, 460, 463, 588, 655, 724, 1492
BseYI CCCAGC 3 cut(s) 345, 894, 1509
BsgI GTGCAG 3 cut(s) 698, 981, 1499
Bsh1236I CGCG 1 cut(s) 131
Bsh1285I CGRYCG 1 cut(s) 183
BshFI GGCC 2 cut(s) 5, 50
BshNI GGYRCC 4 cut(s) 31, 103, 1147, 1282
BsiEI CGRYCG 1 cut(s) 183
BsiHKAI GWGCWC 1 cut(s) 1141
BsiHKCI CYCGRG 2 cut(s) 506, 994
BsiSI CCGG 7 cut(s) 6, 39, 101, 176, 239, 406, 1293
BsiWI CGTACG 1 cut(s) 156
BslFI GGGAC 4 cut(s) 266, 548, 1001, 1318
BsmAI GTCTC 3 cut(s) 509, 754, 997
BsmFI GGGAC 4 cut(s) 266, 548, 1001, 1318
BsnI GGCC 2 cut(s) 5, 50
Bso31I GGTCTC 1 cut(s) 509
BsoBI CYCGRG 2 cut(s) 506, 994
Bsp120I GGGCCC 1 cut(s) 48
Bsp1286I GDGCHC 5 cut(s) 52, 206, 686, 1141, 1184
Bsp1407I TGTACA 1 cut(s) 706
Bsp143I GATC 2 cut(s) 334, 1105
Bsp19I CCATGG 1 cut(s) 421
BspANI GGCC 2 cut(s) 5, 50
BspCNI CTCAG 7 cut(s) 138, 777, 876, 1177, 1207, 1243, 1522
BspFNI CGCG 1 cut(s) 131
BspMAI CTGCAG 1 cut(s) 1453
BspMI ACCTGC 3 cut(s) 424, 1054, 1247
BspPI GGATC 2 cut(s) 329, 1100
BspQI GCTCTTC 1 cut(s) 985
BspT107I GGYRCC 4 cut(s) 31, 103, 1147, 1282
BspTI CTTAAG 1 cut(s) 1073
BspTNI GGTCTC 1 cut(s) 509
BsrDI GCAATG 2 cut(s) 864, 1376
BsrFI RCCGGY 4 cut(s) 5, 38, 405, 1292
BsrGI TGTACA 1 cut(s) 706
BsrI ACTGG 2 cut(s) 291, 957
BssAI RCCGGY 4 cut(s) 5, 38, 405, 1292
BssECI CCNNGG 5 cut(s) 51, 249, 421, 685, 1314
BssMI GATC 2 cut(s) 334, 1105
BssNI GRCGYC 2 cut(s) 104, 110
BssT1I CCWWGG 1 cut(s) 421
Bst2UI CCWGG 3 cut(s) 53, 250, 687
Bst4CI ACNGT 2 cut(s) 585, 971
Bst6I CTCTTC 2 cut(s) 507, 985
BstACI GRCGYC 2 cut(s) 104, 110
BstAFI CTTAAG 1 cut(s) 1073
BstAUI TGTACA 1 cut(s) 706
BstC8I GCNNGC 2 cut(s) 40, 1460
BstDEI CTNAG 7 cut(s) 146, 764, 863, 1185, 1194, 1251, 1530
BstDSI CCRYGG 2 cut(s) 421, 1314
BstENI CCTNNNNNAGG 3 cut(s) 668, 1026, 1254
BstF5I GGATG 2 cut(s) 953, 1502
BstFNI CGCG 1 cut(s) 131
BstH2I RGCGCY 1 cut(s) 107
BstHHI GCGC 3 cut(s) 106, 133, 735
BstKTI GATC 2 cut(s) 337, 1108
BstMAI GTCTC 3 cut(s) 509, 754, 997
BstMBI GATC 2 cut(s) 334, 1105
BstMCI CGRYCG 1 cut(s) 183
BstNI CCWGG 3 cut(s) 53, 250, 687
BstNSI RCATGY 2 cut(s) 483, 1462
BstSCI CCNGG 4 cut(s) 51, 174, 248, 685
BstSFI CTRYAG 1 cut(s) 1449
BstSLI GKGCMC 1 cut(s) 52
BstUI CGCG 1 cut(s) 131
BstV1I GCAGC 9 cut(s) 46, 52, 55, 460, 463, 588, 655, 724, 1492
BstV2I GAAGAC 2 cut(s) 614, 1245
BstX2I RGATCY 1 cut(s) 1105
BstXI CCANNNNNNTGG 1 cut(s) 428
BstYI RGATCY 1 cut(s) 1105
Bsu36I CCTNAGG 2 cut(s) 1185, 1251
BsuRI GGCC 2 cut(s) 5, 50
BtgI CCRYGG 2 cut(s) 421, 1314
BtsCI GGATG 2 cut(s) 953, 1502
BtsIMutI CAGTG 2 cut(s) 964, 976
BveI ACCTGC 3 cut(s) 424, 1054, 1247
Cac8I GCNNGC 2 cut(s) 40, 1460
CaiI CAGNNNCTG 1 cut(s) 476
CfoI GCGC 3 cut(s) 106, 133, 735
Cfr10I RCCGGY 4 cut(s) 5, 38, 405, 1292
Cfr13I GGNCC 5 cut(s) 48, 49, 253, 613, 1015
CseI GACGC 2 cut(s) 118, 1382
Csp6I GTAC 4 cut(s) 157, 268, 707, 1199
CspCI CAANNNNNGTGG 2 cut(s) 1303, 1338
CviAII CATG 9 cut(s) 163, 422, 428, 458, 480, 989, 1214, 1459, 1516
CviQI GTAC 4 cut(s) 157, 268, 707, 1199
DdeI CTNAG 7 cut(s) 146, 764, 863, 1185, 1194, 1251, 1530
DinI GGCGCC 1 cut(s) 105
DpnI GATC 2 cut(s) 336, 1107
DpnII GATC 2 cut(s) 334, 1105
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 507, 985
EarI CTCTTC 2 cut(s) 507, 985
Eco130I CCWWGG 1 cut(s) 421
Eco24I GRGCYC 4 cut(s) 52, 206, 686, 1184
Eco31I GGTCTC 1 cut(s) 509
Eco47I GGWCC 3 cut(s) 253, 613, 1015
Eco57I CTGAAG 4 cut(s) 762, 1011, 1257, 1308
Eco81I CCTNAGG 2 cut(s) 1185, 1251
Eco88I CYCGRG 2 cut(s) 506, 994
EcoNI CCTNNNNNAGG 3 cut(s) 668, 1026, 1254
EcoO109I RGGNCCY 3 cut(s) 48, 253, 1015
EcoRII CCWGG 3 cut(s) 51, 248, 685
EcoT14I CCWWGG 1 cut(s) 421
EcoT38I GRGCYC 4 cut(s) 52, 206, 686, 1184
EgeI GGCGCC 1 cut(s) 105
EheI GGCGCC 1 cut(s) 105
ErhI CCWWGG 1 cut(s) 421
FaeI CATG 9 cut(s) 166, 425, 431, 461, 483, 992, 1217, 1462, 1519
FaqI GGGAC 4 cut(s) 266, 548, 1001, 1318
FatI CATG 9 cut(s) 162, 421, 427, 457, 479, 988, 1213, 1458, 1515
FauI CCCGC 3 cut(s) 70, 243, 1026
FblI GTMKAC 2 cut(s) 587, 966
FokI GGATG 2 cut(s) 940, 1509
FriOI GRGCYC 4 cut(s) 52, 206, 686, 1184
FspBI CTAG 1 cut(s) 1337
GlaI GCGC 3 cut(s) 105, 132, 734
GsaI CCCAGC 3 cut(s) 349, 898, 1513
GsuI CTGGAG 2 cut(s) 274, 1110
HaeII RGCGCY 1 cut(s) 107
HaeIII GGCC 2 cut(s) 5, 50
HapII CCGG 7 cut(s) 6, 39, 101, 176, 239, 406, 1293
HgaI GACGC 2 cut(s) 118, 1382
HhaI GCGC 3 cut(s) 106, 133, 735
Hin1I GRCGYC 2 cut(s) 104, 110
Hin1II CATG 9 cut(s) 166, 425, 431, 461, 483, 992, 1217, 1462, 1519
Hin6I GCGC 3 cut(s) 104, 131, 733
HinP1I GCGC 3 cut(s) 104, 131, 733
HindIII AAGCTT 1 cut(s) 1523
HinfI GANTC 8 cut(s) 92, 697, 762, 902, 1064, 1310, 1439, 1550
HpaII CCGG 7 cut(s) 6, 39, 101, 176, 239, 406, 1293
HphI GGTGA 2 cut(s) 950, 1307
Hpy166II GTNNAC 3 cut(s) 169, 588, 967
Hpy188I TCNGA 4 cut(s) 799, 837, 1057, 1117
Hpy8I GTNNAC 3 cut(s) 169, 588, 967
Hpy99I CGWCG 2 cut(s) 29, 112
HpyAV CCTTC 3 cut(s) 266, 767, 1448
HpyCH4III ACNGT 2 cut(s) 585, 971
HpyCH4IV ACGT 3 cut(s) 155, 619, 1040
HpyF3I CTNAG 7 cut(s) 146, 764, 863, 1185, 1194, 1251, 1530
HpySE526I ACGT 3 cut(s) 155, 619, 1040
Hsp92I GRCGYC 2 cut(s) 104, 110
Hsp92II CATG 9 cut(s) 166, 425, 431, 461, 483, 992, 1217, 1462, 1519
HspAI GCGC 3 cut(s) 104, 131, 733
KasI GGCGCC 1 cut(s) 103
KroI GCCGGC 1 cut(s) 38
KroNI GCCGGC 1 cut(s) 40
Kzo9I GATC 2 cut(s) 334, 1105
LguI GCTCTTC 1 cut(s) 985
LmnI GCTCC 3 cut(s) 201, 998, 1136
Lsp1109I GCAGC 9 cut(s) 46, 52, 55, 460, 463, 588, 655, 724, 1492
LweI GCATC 1 cut(s) 1351
MaeI CTAG 1 cut(s) 1337
MaeII ACGT 3 cut(s) 155, 619, 1040
MaeIII GTNAC 1 cut(s) 1041
MalI GATC 2 cut(s) 336, 1107
MboI GATC 2 cut(s) 334, 1105
MboII GAAGA 8 cut(s) 380, 524, 614, 850, 882, 972, 1059, 1250
MflI RGATCY 1 cut(s) 1105
MhlI GDGCHC 5 cut(s) 52, 206, 686, 1141, 1184
MluCI AATT 7 cut(s) 350, 777, 925, 1050, 1155, 1224, 1387
Mly113I GGCGCC 1 cut(s) 104
MlyI GAGTC 2 cut(s) 756, 1304
MmeI TCCRAC 3 cut(s) 640, 1243, 1416
MroNI GCCGGC 1 cut(s) 38
MroXI GAANNNNTTC 1 cut(s) 96
MseI TTAA 5 cut(s) 371, 528, 822, 1074, 1223
MslI CAYNNNNRTG 2 cut(s) 426, 1463
MspA1I CMGCKG 4 cut(s) 345, 601, 640, 898
MspCI CTTAAG 1 cut(s) 1073
MspI CCGG 7 cut(s) 6, 39, 101, 176, 239, 406, 1293
MspR9I CCNGG 4 cut(s) 53, 176, 250, 687
MvaI CCWGG 3 cut(s) 53, 250, 687
MvnI CGCG 1 cut(s) 131
NaeI GCCGGC 1 cut(s) 40
NarI GGCGCC 1 cut(s) 104
NciI CCSGG 1 cut(s) 176
NcoI CCATGG 1 cut(s) 421
NdeII GATC 2 cut(s) 334, 1105
NgoMIV GCCGGC 1 cut(s) 38
NlaIII CATG 9 cut(s) 166, 425, 431, 461, 483, 992, 1217, 1462, 1519
NspI RCATGY 2 cut(s) 483, 1462
PaeI GCATGC 1 cut(s) 1462
PaeR7I CTCGAG 1 cut(s) 506
PaqCI CACCTGC 1 cut(s) 1247
PciSI GCTCTTC 1 cut(s) 985
PdiI GCCGGC 1 cut(s) 40
PdmI GAANNNNTTC 1 cut(s) 96
PfeI GAWTC 6 cut(s) 92, 697, 902, 1064, 1439, 1550
Pfl23II CGTACG 1 cut(s) 156
PflFI GACNNNGTC 1 cut(s) 429
PflMI CCANNNNNTGG 3 cut(s) 458, 1398, 1516
PleI GAGTC 2 cut(s) 756, 1304
PluTI GGCGCC 1 cut(s) 107
PpsI GAGTC 2 cut(s) 756, 1304
PpuMI RGGWCCY 2 cut(s) 253, 1015
Psp1406I AACGTT 1 cut(s) 1040
Psp5II RGGWCCY 2 cut(s) 253, 1015
Psp6I CCWGG 3 cut(s) 51, 248, 685
PspFI CCCAGC 3 cut(s) 345, 894, 1509
PspGI CCWGG 3 cut(s) 51, 248, 685
PspLI CGTACG 1 cut(s) 156
PspOMI GGGCCC 1 cut(s) 48
PspPI GGNCC 5 cut(s) 48, 49, 253, 613, 1015
PspPPI RGGWCCY 2 cut(s) 253, 1015
PstI CTGCAG 1 cut(s) 1453
PstNI CAGNNNCTG 1 cut(s) 476
PsuI RGATCY 1 cut(s) 1105
PsyI GACNNNGTC 1 cut(s) 429
PvuII CAGCTG 2 cut(s) 601, 898
RsaI GTAC 4 cut(s) 158, 269, 708, 1200
RsaNI GTAC 4 cut(s) 157, 268, 707, 1199
RseI CAYNNNNRTG 2 cut(s) 426, 1463
SapI GCTCTTC 1 cut(s) 985
SaqAI TTAA 5 cut(s) 371, 528, 822, 1074, 1223
Sau3AI GATC 2 cut(s) 334, 1105
Sau96I GGNCC 5 cut(s) 48, 49, 253, 613, 1015
ScaI AGTACT 1 cut(s) 269
SchI GAGTC 2 cut(s) 756, 1304
ScrFI CCNGG 4 cut(s) 53, 176, 250, 687
SduI GDGCHC 5 cut(s) 52, 206, 686, 1141, 1184
SfaNI GCATC 1 cut(s) 1351
SfcI CTRYAG 1 cut(s) 1449
SfoI GGCGCC 1 cut(s) 105
Sfr274I CTCGAG 1 cut(s) 506
SinI GGWCC 3 cut(s) 253, 613, 1015
SlaI CTCGAG 1 cut(s) 506
SmiMI CAYNNNNRTG 2 cut(s) 426, 1463
SmlI CTYRAG 4 cut(s) 506, 920, 1073, 1167
SmoI CTYRAG 4 cut(s) 506, 920, 1073, 1167
SphI GCATGC 1 cut(s) 1462
Sse9I AATT 7 cut(s) 350, 777, 925, 1050, 1155, 1224, 1387
SspDI GGCGCC 1 cut(s) 103
SspMI CTAG 1 cut(s) 1337
StyD4I CCNGG 4 cut(s) 51, 174, 248, 685
StyI CCWWGG 1 cut(s) 421
TaaI ACNGT 2 cut(s) 585, 971
TaiI ACGT 3 cut(s) 158, 622, 1043
TaqI TCGA 4 cut(s) 125, 507, 1308, 1442
TaqII GACCGA 1 cut(s) 197
TasI AATT 7 cut(s) 350, 777, 925, 1050, 1155, 1224, 1387
TatI WGTACW 2 cut(s) 267, 706
TauI GCSGC 8 cut(s) 59, 65, 74, 77, 136, 139, 643, 851
TfiI GAWTC 6 cut(s) 92, 697, 902, 1064, 1439, 1550
Tru1I TTAA 5 cut(s) 371, 528, 822, 1074, 1223
Tru9I TTAA 5 cut(s) 371, 528, 822, 1074, 1223
TscAI CASTG 2 cut(s) 964, 976
TseI GCWGC 9 cut(s) 59, 65, 68, 448, 476, 601, 643, 712, 1480
TspDTI ATGAA 5 cut(s) 858, 890, 936, 1446, 1488
TspRI CASTG 2 cut(s) 964, 976
Tth111I GACNNNGTC 1 cut(s) 429
Van91I CCANNNNNTGG 3 cut(s) 458, 1398, 1516
Vha464I CTTAAG 1 cut(s) 1073
VpaK11BI GGWCC 3 cut(s) 253, 613, 1015
XagI CCTNNNNNAGG 3 cut(s) 668, 1026, 1254
XapI RAATTY 2 cut(s) 350, 925
XceI RCATGY 2 cut(s) 483, 1462
XhoI CTCGAG 1 cut(s) 506
XmiI GTMKAC 2 cut(s) 587, 966
XmnI GAANNNNTTC 1 cut(s) 96
XspI CTAG 1 cut(s) 1337
ZrmI AGTACT 1 cut(s) 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.