Heat shock factor protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32330 AT1G32330 |
| fragaria_vesca | FvH4_5g22720 |
| malus_domestica | MD06G1037900.v1.1 MD16G1271200.v1.1 |
| prunus_persica | Prupe.5G031100_v2.0.a1 |
| pyrus_communis | pycom16g24070 |
| rosa_chinensis | RchiOBHm_Chr7g0211291 |
| rosa_laevigata | RLG00000003012 |
| rosa_multiflora | Rmu_co8434101.1_g000001 Rmu_sc0001226.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00247950 |
| rosa_rugosa | Rorug07G0124900 |
| rosa_samantha | Rh7AG257200 Rh7BG251300 Rh7CG274000 Rh7DG264600 |
| rosa_wichuraiana | Rw7G021980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1525 |
| Acc16I | TGCGCA | 1 cut(s) | 399 |
| Acc36I | ACCTGC | 1 cut(s) | 403 |
| Acc65I | GGTACC | 1 cut(s) | 1183 |
| AccB1I | GGYRCC | 2 cut(s) | 82, 1183 |
| AccI | GTMKAC | 1 cut(s) | 563 |
| AccII | CGCG | 1 cut(s) | 110 |
| AclWI | GGATC | 2 cut(s) | 1337, 1383 |
| AcoI | YGGCCR | 1 cut(s) | 39 |
| AcsI | RAATTY | 4 cut(s) | 221, 329, 442, 893 |
| AcuI | CTGAAG | 4 cut(s) | 981, 1047, 1230, 1515 |
| AcyI | GRCGYC | 2 cut(s) | 83, 1522 |
| AfaI | GTAC | 6 cut(s) | 137, 248, 684, 769, 1032, 1185 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 67, 401, 434, 646, 982, 1232 |
| AflII | CTTAAG | 1 cut(s) | 371 |
| AgsI | TTSAA | 6 cut(s) | 253, 289, 719, 954, 980, 1250 |
| AjnI | CCWGG | 1 cut(s) | 165 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 182, 214 |
| AluBI | AGCT | 5 cut(s) | 198, 273, 577, 948, 1162 |
| AluI | AGCT | 5 cut(s) | 198, 273, 577, 948, 1162 |
| Alw21I | GWGCWC | 2 cut(s) | 950, 1111 |
| AlwI | GGATC | 2 cut(s) | 1337, 1383 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 452 |
| Ama87I | CYCGRG | 1 cut(s) | 1157 |
| AoxI | GGCC | 2 cut(s) | 39, 478 |
| ApeKI | GCWGC | 8 cut(s) | 452, 550, 553, 577, 619, 688, 815, 1453 |
| ApoI | RAATTY | 4 cut(s) | 221, 329, 442, 893 |
| Asp718I | GGTACC | 1 cut(s) | 1183 |
| AspLEI | GCGC | 4 cut(s) | 85, 112, 400, 711 |
| AspS9I | GGNCC | 3 cut(s) | 232, 985, 1223 |
| AsuC2I | CCSGG | 2 cut(s) | 155, 862 |
| AvaI | CYCGRG | 1 cut(s) | 1157 |
| AvaII | GGWCC | 3 cut(s) | 232, 985, 1223 |
| BaeGI | GKGCMC | 1 cut(s) | 1437 |
| BanI | GGYRCC | 2 cut(s) | 82, 1183 |
| BanII | GRGCYC | 4 cut(s) | 61, 185, 662, 950 |
| BbsI | GAAGAC | 1 cut(s) | 590 |
| Bbv12I | GWGCWC | 2 cut(s) | 950, 1111 |
| BbvI | GCAGC | 8 cut(s) | 439, 562, 564, 565, 631, 700, 827, 1465 |
| BccI | CCATC | 5 cut(s) | 436, 770, 1268, 1298, 1467 |
| BceAI | ACGGC | 2 cut(s) | 942, 1441 |
| BciT130I | CCWGG | 1 cut(s) | 167 |
| BcnI | CCSGG | 2 cut(s) | 155, 862 |
| BfaI | CTAG | 1 cut(s) | 228 |
| BfmI | CTRYAG | 1 cut(s) | 1043 |
| BfoI | RGCGCY | 1 cut(s) | 86 |
| BfrI | CTTAAG | 1 cut(s) | 371 |
| BfuAI | ACCTGC | 1 cut(s) | 403 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 65 |
| BglII | AGATCT | 1 cut(s) | 1073 |
| BmcAI | AGTACT | 1 cut(s) | 248 |
| Bme1390I | CCNGG | 3 cut(s) | 155, 167, 862 |
| Bme18I | GGWCC | 3 cut(s) | 232, 985, 1223 |
| BmeT110I | CYCGRG | 1 cut(s) | 1157 |
| BmgT120I | GGNCC | 3 cut(s) | 232, 985, 1223 |
| BmiI | GGNNCC | 9 cut(s) | 58, 78, 84, 182, 212, 233, 987, 1185, 1224 |
| BmrFI | CCNGG | 3 cut(s) | 155, 167, 862 |
| BmsI | GCATC | 4 cut(s) | 41, 373, 1219, 1268 |
| BpiI | GAAGAC | 1 cut(s) | 590 |
| BpmI | CTGGAG | 2 cut(s) | 253, 786 |
| Bpu10I | CCTNAGC | 1 cut(s) | 830 |
| BpuEI | CTTGAG | 2 cut(s) | 503, 725 |
| BpuMI | CCSGG | 2 cut(s) | 155, 862 |
| BsaHI | GRCGYC | 2 cut(s) | 83, 1522 |
| BsaJI | CCNNGG | 1 cut(s) | 1437 |
| BsaWI | WCCGGW | 1 cut(s) | 1174 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 67, 401, 434, 646, 982, 1232 |
| Bse118I | RCCGGY | 2 cut(s) | 41, 384 |
| Bse1I | ACTGG | 2 cut(s) | 803, 927 |
| Bse3DI | GCAATG | 4 cut(s) | 591, 831, 913, 1358 |
| BseBI | CCWGG | 1 cut(s) | 167 |
| BseDI | CCNNGG | 1 cut(s) | 1437 |
| BseGI | GGATG | 5 cut(s) | 754, 923, 1152, 1309, 1478 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 67, 401, 434, 646, 982, 1232 |
| BseMI | GCAATG | 4 cut(s) | 591, 831, 913, 1358 |
| BseMII | CTCAG | 5 cut(s) | 116, 689, 844, 1098, 1151 |
| BseNI | ACTGG | 2 cut(s) | 803, 927 |
| BseSI | GKGCMC | 1 cut(s) | 1437 |
| BseXI | GCAGC | 8 cut(s) | 439, 562, 564, 565, 631, 700, 827, 1465 |
| BseYI | CCCAGC | 3 cut(s) | 60, 324, 1485 |
| BsgI | GTGCAG | 1 cut(s) | 674 |
| Bsh1236I | CGCG | 1 cut(s) | 110 |
| Bsh1285I | CGRYCG | 1 cut(s) | 162 |
| BshFI | GGCC | 2 cut(s) | 41, 480 |
| BshNI | GGYRCC | 2 cut(s) | 82, 1183 |
| BsiEI | CGRYCG | 1 cut(s) | 162 |
| BsiHKAI | GWGCWC | 2 cut(s) | 950, 1111 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1157 |
| BsiSI | CCGG | 7 cut(s) | 42, 80, 155, 218, 385, 862, 1175 |
| BsiWI | CGTACG | 1 cut(s) | 135 |
| BslFI | GGGAC | 7 cut(s) | 245, 524, 773, 971, 1236, 1490, 1533 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 67, 401, 434, 646, 982, 1232 |
| BsmFI | GGGAC | 7 cut(s) | 245, 524, 773, 971, 1236, 1490, 1533 |
| BsnI | GGCC | 2 cut(s) | 41, 480 |
| BsoBI | CYCGRG | 1 cut(s) | 1157 |
| Bsp1286I | GDGCHC | 6 cut(s) | 61, 185, 662, 950, 1111, 1437 |
| Bsp1407I | TGTACA | 1 cut(s) | 682 |
| Bsp143I | GATC | 3 cut(s) | 1073, 1342, 1375 |
| Bsp19I | CCATGG | 1 cut(s) | 1437 |
| BspANI | GGCC | 2 cut(s) | 41, 480 |
| BspCNI | CTCAG | 5 cut(s) | 117, 688, 843, 1097, 1150 |
| BspFNI | CGCG | 1 cut(s) | 110 |
| BspLI | GGNNCC | 9 cut(s) | 58, 78, 84, 182, 212, 233, 987, 1185, 1224 |
| BspMI | ACCTGC | 1 cut(s) | 403 |
| BspPI | GGATC | 2 cut(s) | 1337, 1383 |
| BspQI | GCTCTTC | 2 cut(s) | 955, 1443 |
| BspT107I | GGYRCC | 2 cut(s) | 82, 1183 |
| BspTI | CTTAAG | 1 cut(s) | 371 |
| BsrDI | GCAATG | 4 cut(s) | 591, 831, 913, 1358 |
| BsrFI | RCCGGY | 2 cut(s) | 41, 384 |
| BsrGI | TGTACA | 1 cut(s) | 682 |
| BsrI | ACTGG | 2 cut(s) | 803, 927 |
| BssAI | RCCGGY | 2 cut(s) | 41, 384 |
| BssECI | CCNNGG | 1 cut(s) | 1437 |
| BssMI | GATC | 3 cut(s) | 1073, 1342, 1375 |
| BssNI | GRCGYC | 2 cut(s) | 83, 1522 |
| BssT1I | CCWWGG | 1 cut(s) | 1437 |
| Bst2UI | CCWGG | 1 cut(s) | 167 |
| Bst4CI | ACNGT | 4 cut(s) | 93, 561, 941, 1066 |
| Bst6I | CTCTTC | 3 cut(s) | 483, 955, 1443 |
| BstACI | GRCGYC | 2 cut(s) | 83, 1522 |
| BstAFI | CTTAAG | 1 cut(s) | 371 |
| BstAUI | TGTACA | 1 cut(s) | 682 |
| BstC8I | GCNNGC | 4 cut(s) | 43, 66, 87, 582 |
| BstDEI | CTNAG | 5 cut(s) | 125, 675, 830, 1084, 1137 |
| BstDSI | CCRYGG | 1 cut(s) | 1437 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 644, 980 |
| BstF5I | GGATG | 5 cut(s) | 754, 923, 1152, 1309, 1478 |
| BstFNI | CGCG | 1 cut(s) | 110 |
| BstH2I | RGCGCY | 1 cut(s) | 86 |
| BstHHI | GCGC | 4 cut(s) | 85, 112, 400, 711 |
| BstKTI | GATC | 3 cut(s) | 1076, 1345, 1378 |
| BstMBI | GATC | 3 cut(s) | 1073, 1342, 1375 |
| BstMCI | CGRYCG | 1 cut(s) | 162 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 38, 51, 65, 74, 708, 821, 954, 1115, 1265 |
| BstNI | CCWGG | 1 cut(s) | 167 |
| BstSCI | CCNGG | 3 cut(s) | 153, 165, 860 |
| BstSFI | CTRYAG | 1 cut(s) | 1043 |
| BstSLI | GKGCMC | 1 cut(s) | 1437 |
| BstUI | CGCG | 1 cut(s) | 110 |
| BstV1I | GCAGC | 8 cut(s) | 439, 562, 564, 565, 631, 700, 827, 1465 |
| BstV2I | GAAGAC | 1 cut(s) | 590 |
| BstX2I | RGATCY | 1 cut(s) | 1073 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 324 |
| BstYI | RGATCY | 1 cut(s) | 1073 |
| BsuRI | GGCC | 2 cut(s) | 41, 480 |
| BtgI | CCRYGG | 1 cut(s) | 1437 |
| BtsCI | GGATG | 5 cut(s) | 754, 923, 1152, 1309, 1478 |
| BtsIMutI | CAGTG | 4 cut(s) | 453, 810, 946, 989 |
| BveI | ACCTGC | 1 cut(s) | 403 |
| Cac8I | GCNNGC | 4 cut(s) | 43, 66, 87, 582 |
| CaiI | CAGNNNCTG | 1 cut(s) | 452 |
| CfoI | GCGC | 4 cut(s) | 85, 112, 400, 711 |
| Cfr10I | RCCGGY | 2 cut(s) | 41, 384 |
| Cfr13I | GGNCC | 3 cut(s) | 232, 985, 1223 |
| CseI | GACGC | 2 cut(s) | 951, 1274 |
| CsiI | ACCWGGT | 1 cut(s) | 165 |
| Csp6I | GTAC | 6 cut(s) | 136, 247, 683, 768, 1031, 1184 |
| CviAII | CATG | 6 cut(s) | 142, 401, 407, 1219, 1255, 1438 |
| CviQI | GTAC | 6 cut(s) | 136, 247, 683, 768, 1031, 1184 |
| DdeI | CTNAG | 5 cut(s) | 125, 675, 830, 1084, 1137 |
| DinI | GGCGCC | 1 cut(s) | 84 |
| DpnI | GATC | 3 cut(s) | 1075, 1344, 1377 |
| DpnII | GATC | 3 cut(s) | 1073, 1342, 1375 |
| EaeI | YGGCCR | 1 cut(s) | 39 |
| Eam1104I | CTCTTC | 3 cut(s) | 483, 955, 1443 |
| EarI | CTCTTC | 3 cut(s) | 483, 955, 1443 |
| EciI | GGCGGA | 1 cut(s) | 69 |
| Ecl136II | GAGCTC | 1 cut(s) | 948 |
| Eco130I | CCWWGG | 1 cut(s) | 1437 |
| Eco24I | GRGCYC | 4 cut(s) | 61, 185, 662, 950 |
| Eco47I | GGWCC | 3 cut(s) | 232, 985, 1223 |
| Eco53kI | GAGCTC | 1 cut(s) | 948 |
| Eco57I | CTGAAG | 4 cut(s) | 981, 1047, 1230, 1515 |
| Eco88I | CYCGRG | 1 cut(s) | 1157 |
| EcoICRI | GAGCTC | 1 cut(s) | 948 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 644, 980 |
| EcoO109I | RGGNCCY | 3 cut(s) | 232, 985, 1223 |
| EcoRI | GAATTC | 1 cut(s) | 442 |
| EcoRII | CCWGG | 1 cut(s) | 165 |
| EcoT14I | CCWWGG | 1 cut(s) | 1437 |
| EcoT38I | GRGCYC | 4 cut(s) | 61, 185, 662, 950 |
| EgeI | GGCGCC | 1 cut(s) | 84 |
| EheI | GGCGCC | 1 cut(s) | 84 |
| ErhI | CCWWGG | 1 cut(s) | 1437 |
| FaeI | CATG | 6 cut(s) | 145, 404, 410, 1222, 1258, 1441 |
| FaqI | GGGAC | 7 cut(s) | 245, 524, 773, 971, 1236, 1490, 1533 |
| FatI | CATG | 6 cut(s) | 141, 400, 406, 1218, 1254, 1437 |
| FauI | CCCGC | 4 cut(s) | 61, 222, 749, 1225 |
| FblI | GTMKAC | 1 cut(s) | 563 |
| FokI | GGATG | 5 cut(s) | 761, 910, 1139, 1316, 1485 |
| FriOI | GRGCYC | 4 cut(s) | 61, 185, 662, 950 |
| FspBI | CTAG | 1 cut(s) | 228 |
| FspI | TGCGCA | 1 cut(s) | 399 |
| GlaI | GCGC | 4 cut(s) | 84, 111, 399, 710 |
| GsaI | CCCAGC | 3 cut(s) | 64, 328, 1489 |
| GsuI | CTGGAG | 2 cut(s) | 253, 786 |
| HaeII | RGCGCY | 1 cut(s) | 86 |
| HaeIII | GGCC | 2 cut(s) | 41, 480 |
| HapII | CCGG | 7 cut(s) | 42, 80, 155, 218, 385, 862, 1175 |
| HgaI | GACGC | 2 cut(s) | 951, 1274 |
| HhaI | GCGC | 4 cut(s) | 85, 112, 400, 711 |
| Hin1I | GRCGYC | 2 cut(s) | 83, 1522 |
| Hin1II | CATG | 6 cut(s) | 145, 404, 410, 1222, 1258, 1441 |
| Hin6I | GCGC | 4 cut(s) | 83, 110, 398, 709 |
| HinP1I | GCGC | 4 cut(s) | 83, 110, 398, 709 |
| HincII | GTYRAC | 3 cut(s) | 313, 724, 1461 |
| HindII | GTYRAC | 3 cut(s) | 313, 724, 1461 |
| HinfI | GANTC | 4 cut(s) | 673, 761, 869, 1412 |
| HpaII | CCGG | 7 cut(s) | 42, 80, 155, 218, 385, 862, 1175 |
| Hpy166II | GTNNAC | 5 cut(s) | 148, 313, 564, 724, 1461 |
| Hpy188I | TCNGA | 7 cut(s) | 126, 360, 1027, 1087, 1106, 1264, 1534 |
| Hpy188III | TCNNGA | 9 cut(s) | 670, 773, 966, 980, 1059, 1208, 1340, 1346, 1394 |
| Hpy8I | GTNNAC | 5 cut(s) | 148, 313, 564, 724, 1461 |
| Hpy99I | CGWCG | 2 cut(s) | 29, 1106 |
| HpyAV | CCTTC | 4 cut(s) | 245, 301, 986, 1421 |
| HpyCH4III | ACNGT | 4 cut(s) | 93, 561, 941, 1066 |
| HpyCH4IV | ACGT | 3 cut(s) | 134, 595, 1522 |
| HpyCH4V | TGCA | 8 cut(s) | 335, 529, 580, 592, 644, 655, 1019, 1424 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 38, 51, 65, 74, 708, 821, 954, 1115, 1265 |
| HpyF3I | CTNAG | 5 cut(s) | 125, 675, 830, 1084, 1137 |
| HpySE526I | ACGT | 3 cut(s) | 134, 595, 1522 |
| Hsp92I | GRCGYC | 2 cut(s) | 83, 1522 |
| Hsp92II | CATG | 6 cut(s) | 145, 404, 410, 1222, 1258, 1441 |
| HspAI | GCGC | 4 cut(s) | 83, 110, 398, 709 |
| KasI | GGCGCC | 1 cut(s) | 82 |
| KpnI | GGTACC | 1 cut(s) | 1187 |
| KroI | GCCGGC | 1 cut(s) | 41 |
| KroNI | GCCGGC | 1 cut(s) | 43 |
| Kzo9I | GATC | 3 cut(s) | 1073, 1342, 1375 |
| LguI | GCTCTTC | 2 cut(s) | 955, 1443 |
| LmnI | GCTCC | 5 cut(s) | 56, 82, 180, 945, 1106 |
| Lsp1109I | GCAGC | 8 cut(s) | 439, 562, 564, 565, 631, 700, 827, 1465 |
| LweI | GCATC | 4 cut(s) | 41, 373, 1219, 1268 |
| MabI | ACCWGGT | 1 cut(s) | 165 |
| MaeI | CTAG | 1 cut(s) | 228 |
| MaeII | ACGT | 3 cut(s) | 134, 595, 1522 |
| MaeIII | GTNAC | 2 cut(s) | 93, 970 |
| MalI | GATC | 3 cut(s) | 1075, 1344, 1377 |
| MboI | GATC | 3 cut(s) | 1073, 1342, 1375 |
| MboII | GAAGA | 7 cut(s) | 500, 590, 849, 942, 1029, 1223, 1460 |
| MfeI | CAATTG | 1 cut(s) | 900 |
| MflI | RGATCY | 1 cut(s) | 1073 |
| MhlI | GDGCHC | 6 cut(s) | 61, 185, 662, 950, 1111, 1437 |
| MluCI | AATT | 9 cut(s) | 221, 329, 442, 714, 893, 900, 1020, 1369, 1379 |
| Mly113I | GGCGCC | 1 cut(s) | 83 |
| MlyI | GAGTC | 2 cut(s) | 667, 755 |
| MmeI | TCCRAC | 2 cut(s) | 1084, 1219 |
| MroNI | GCCGGC | 1 cut(s) | 41 |
| MseI | TTAA | 4 cut(s) | 372, 540, 876, 932 |
| MslI | CAYNNNNRTG | 1 cut(s) | 405 |
| MspA1I | CMGCKG | 3 cut(s) | 324, 577, 616 |
| MspCI | CTTAAG | 1 cut(s) | 371 |
| MspI | CCGG | 7 cut(s) | 42, 80, 155, 218, 385, 862, 1175 |
| MspR9I | CCNGG | 3 cut(s) | 155, 167, 862 |
| MunI | CAATTG | 1 cut(s) | 900 |
| MvaI | CCWGG | 1 cut(s) | 167 |
| MvnI | CGCG | 1 cut(s) | 110 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 38, 51, 65, 74, 708, 821, 954, 1115, 1265 |
| NaeI | GCCGGC | 1 cut(s) | 43 |
| NarI | GGCGCC | 1 cut(s) | 83 |
| NciI | CCSGG | 2 cut(s) | 155, 862 |
| NcoI | CCATGG | 1 cut(s) | 1437 |
| NdeII | GATC | 3 cut(s) | 1073, 1342, 1375 |
| NgoMIV | GCCGGC | 1 cut(s) | 41 |
| NlaIII | CATG | 6 cut(s) | 145, 404, 410, 1222, 1258, 1441 |
| NlaIV | GGNNCC | 9 cut(s) | 58, 78, 84, 182, 212, 233, 987, 1185, 1224 |
| NmuCI | GTSAC | 1 cut(s) | 970 |
| NsbI | TGCGCA | 1 cut(s) | 399 |
| PciSI | GCTCTTC | 2 cut(s) | 955, 1443 |
| PdiI | GCCGGC | 1 cut(s) | 43 |
| PfeI | GAWTC | 2 cut(s) | 869, 1412 |
| Pfl23II | CGTACG | 1 cut(s) | 135 |
| PflFI | GACNNNGTC | 1 cut(s) | 408 |
| PleI | GAGTC | 2 cut(s) | 667, 755 |
| PluTI | GGCGCC | 1 cut(s) | 86 |
| PpsI | GAGTC | 2 cut(s) | 667, 755 |
| PpuMI | RGGWCCY | 3 cut(s) | 232, 985, 1223 |
| Psp124BI | GAGCTC | 1 cut(s) | 950 |
| Psp5II | RGGWCCY | 3 cut(s) | 232, 985, 1223 |
| Psp6I | CCWGG | 1 cut(s) | 165 |
| PspFI | CCCAGC | 3 cut(s) | 60, 324, 1485 |
| PspGI | CCWGG | 1 cut(s) | 165 |
| PspLI | CGTACG | 1 cut(s) | 135 |
| PspN4I | GGNNCC | 9 cut(s) | 58, 78, 84, 182, 212, 233, 987, 1185, 1224 |
| PspPI | GGNCC | 3 cut(s) | 232, 985, 1223 |
| PspPPI | RGGWCCY | 3 cut(s) | 232, 985, 1223 |
| PstNI | CAGNNNCTG | 1 cut(s) | 452 |
| PsuI | RGATCY | 1 cut(s) | 1073 |
| PsyI | GACNNNGTC | 1 cut(s) | 408 |
| PvuII | CAGCTG | 1 cut(s) | 577 |
| RsaI | GTAC | 6 cut(s) | 137, 248, 684, 769, 1032, 1185 |
| RsaNI | GTAC | 6 cut(s) | 136, 247, 683, 768, 1031, 1184 |
| RseI | CAYNNNNRTG | 1 cut(s) | 405 |
| SacI | GAGCTC | 1 cut(s) | 950 |
| SapI | GCTCTTC | 2 cut(s) | 955, 1443 |
| SaqAI | TTAA | 4 cut(s) | 372, 540, 876, 932 |
| Sau3AI | GATC | 3 cut(s) | 1073, 1342, 1375 |
| Sau96I | GGNCC | 3 cut(s) | 232, 985, 1223 |
| ScaI | AGTACT | 1 cut(s) | 248 |
| SchI | GAGTC | 2 cut(s) | 667, 755 |
| ScrFI | CCNGG | 3 cut(s) | 155, 167, 862 |
| SduI | GDGCHC | 6 cut(s) | 61, 185, 662, 950, 1111, 1437 |
| SexAI | ACCWGGT | 1 cut(s) | 165 |
| SfaNI | GCATC | 4 cut(s) | 41, 373, 1219, 1268 |
| SfcI | CTRYAG | 1 cut(s) | 1043 |
| SfoI | GGCGCC | 1 cut(s) | 84 |
| SinI | GGWCC | 3 cut(s) | 232, 985, 1223 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 405 |
| SmlI | CTYRAG | 3 cut(s) | 371, 482, 740 |
| SmoI | CTYRAG | 3 cut(s) | 371, 482, 740 |
| Sse9I | AATT | 9 cut(s) | 221, 329, 442, 714, 893, 900, 1020, 1369, 1379 |
| SspDI | GGCGCC | 1 cut(s) | 82 |
| SspMI | CTAG | 1 cut(s) | 228 |
| SstI | GAGCTC | 1 cut(s) | 950 |
| StyD4I | CCNGG | 3 cut(s) | 153, 165, 860 |
| StyI | CCWWGG | 1 cut(s) | 1437 |
| TaaI | ACNGT | 4 cut(s) | 93, 561, 941, 1066 |
| TaiI | ACGT | 3 cut(s) | 137, 598, 1525 |
| TaqI | TCGA | 1 cut(s) | 104 |
| TaqII | GACCGA | 1 cut(s) | 176 |
| TasI | AATT | 9 cut(s) | 221, 329, 442, 714, 893, 900, 1020, 1369, 1379 |
| TatI | WGTACW | 3 cut(s) | 246, 682, 1030 |
| TauI | GCSGC | 6 cut(s) | 48, 51, 54, 115, 118, 619 |
| TfiI | GAWTC | 2 cut(s) | 869, 1412 |
| Tru1I | TTAA | 4 cut(s) | 372, 540, 876, 932 |
| Tru9I | TTAA | 4 cut(s) | 372, 540, 876, 932 |
| TscAI | CASTG | 4 cut(s) | 453, 810, 946, 996 |
| TseFI | GTSAC | 1 cut(s) | 970 |
| TseI | GCWGC | 8 cut(s) | 452, 550, 553, 577, 619, 688, 815, 1453 |
| Tsp45I | GTSAC | 1 cut(s) | 970 |
| TspDTI | ATGAA | 3 cut(s) | 825, 1419, 1461 |
| TspGWI | ACGGA | 1 cut(s) | 748 |
| TspRI | CASTG | 4 cut(s) | 453, 810, 946, 996 |
| Tth111I | GACNNNGTC | 1 cut(s) | 408 |
| Vha464I | CTTAAG | 1 cut(s) | 371 |
| VpaK11BI | GGWCC | 3 cut(s) | 232, 985, 1223 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 644, 980 |
| XapI | RAATTY | 4 cut(s) | 221, 329, 442, 893 |
| XmiI | GTMKAC | 1 cut(s) | 563 |
| XspI | CTAG | 1 cut(s) | 228 |
| ZraI | GACGTC | 1 cut(s) | 1523 |
| ZrmI | AGTACT | 1 cut(s) | 248 |