Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006988

Physical Location & Seq

Genomic Coordinates Forward (+)

15973054 .. 15976813

Gene Structure 3760 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G42540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2802 bp

ATGAAGCAACTCTGGACTTTCTTCTTCTTGTCTTTCCTTTGTAGTGGATTGTTCAGAAGAACACATTCTGAGAAACCAAAAGTTGTGAAAATCGGTTCTATATTCAGTTTTGATTCAGTTATTGGCAAAGTTGCTAAGATCGCTATTGATGAAGCAGTAAAAGATGTGAATTCAAATCCAGACATTCTCAGCGGAACAAAGTTTTCTGTTTCGATGCAAAACTCTAACTGCAGCGGTTTTATGGGCATGGTTGAAGCATTGAGGTTTATGGAGAAAGATATAGTTGGGATTATAGGACCACAATGTTCTGTAGTAGCTCATATGATATCTCATATGGCTAACGAACTTCGTGTACCGCTTCTTTCGTTTGCTGTAACCGATCCCGTAATGTCGCCGTTACAGTTTCCGTATTTCATTAGGACTACTCAGAGTGATTTATATCAAATGGATGCAATAGCATCCATTGTAGATTTTTATGGTTGGAAAGAAGTTATTGCTGTGTTTGTTGATGATGATTTCGGTAGGAACGGTGTTGCTGCGTTGAACGATAAGCTTGCGAGTAGGAGATTGAGAATTACTTATAAGGCGGGTTTACATCCTGACACGGCTGTTAATAAGAATGAGATCATGAACATGCTGATAAAGATCATGTTGCTTCAACCGAGGATTGTTGTGATACATGTTTATTCGGAGTTGGGGTTCGCGGTTTTTAAGGAGGCTAAGTATCTTGGAATGATGGGAAATGGATATGTTTGGATCGCTACGGATTGGCTCTCTACGAATCTTGACTCTTCTTCGCCGTTACCCGCTGAGAGGTTGGAAACTATTCAAGGTGTTCTTGTTCTGCGTCCACACACGCCGGATTCGGATTTTAAACGGGAGTTTTTCAAGAGGTGGCGTAAGATGTCTGGTGCTTCTTTGGCTCTTAATACATATGGACTCTATGCTTATGATTCTGTTATGTTGTTAGCCCGGGGTTTAGATAAGTTCTTTAAAGACGGTGGGAATATATCGTTTTCGAATCACTCAATGCTCAATACGTTGGGAAAAAGCGGAAATCTCAACTTAGAGGCTATGACTGTCTTTGATGGTGGAGAAGCACTGCTTAAAGATATCCTCGGAACGCGTATGGTTGGTTTAACGGGACAGCTTCAGTTCACTCCAGACAGGTCTCGGACCCGTCCAGCTTACGATATTATCAATGTGGCGGGAACCGGTGTTCGTCAAATAGGCTACTGGTCAAATCATTCTGGTTTATCAACTGTATTACCTGAGTTACTCTACACAAAGGAGAAACCAAATATGTCAACAAGTCCGAAACTAAAGCATGTCATTTGGCCGGGAGAAACGTTTACGAAACCTCGCGGATGGGTTTTCTCTAACAATGGGAAAGAACTCAAGATTGGCGTGCCTCTTCGCGTTAGTTACAAGGAGTTTGTATCACAAATTCGCGGAACCGAGAACATGTTCAAAGGGTTTTGCATTGATGTCTTCACGGCTGCAGTGAATCTTTTACCGTACGCAGTTCCTGTCAAGTTTATTCCTTATGGAAATGGAAAGGAGAATCCGAGCTACACGCATATGGTTGAGATGATAACAACTGGTAATTTTGATGGGGTAGTAGGTGATGTTGCCATTGTAACAAACCGGACAAAGATTGTAGATTTCACACAACCATATGCAGCATCAGGACTAGTTGTAGTTGCACCTTTTAAAAAACTGAATTCAGGAGCCTGGGCTTTTCTTCGACCTTTCAACCGTCTTATGTGGGCTGTCACGGGTTGTTGCTTTCTCTTTGTTGGCATTGTTGTTTGGATCTTGGAACATAGGACTAACGATGAATTCAGAGGCCCACCTAAGAGACAATGTGTCACAATTCTCTGGTTTAGCTTCTCGACCATGTTTTTCGCGCATAGAGAGAACACAGTTAGTACACTTGGACGGTTGGTTCTGATCATATGGCTATTCGTTGTACTAATCATCAACTCGAGCTACACGGCTAGTCTGACATCGATATTGACGGTTCAGCAGCTCTCTTCACCCATCAAGGGAATTGAAAGCCTTAGAGAAAGAGATGATCCAATAGGGTACCAGGTTGGTTCATTTGCAGAGAGTTATTTGAGGAACGAACTCAACATATCAGAGTCACGCCTAGTCCCACTTGGAACACCTGAAGCCTATGCTAAGGCATTAAAAGATGGACCAAGCAAAGGAGGCGTTGCCGCGATTGTTGACGAACGTCCTTATGTCGAACTCTTCCTCTCCAGCAACTGCGCTTATAGAATCGTTGGTCAAGAGTTCACCAAAAGTGGCTGGGGATTTGCCTTTCCTAGAGACTCTCCTCTAGCAATAGATCTATCAACAGCGATCTTAGAGCTAGCAGAGAACGGAGATTTGCAAAGGATCCACGACAAATGGCTAATGAAGAACGCATGCACTCTAGAGAACGCGGAGCTCGAATCAGACAGGCTTCATCTAAAAAGCTTTTGGGGACTATTTCTCATATGCGGCGTCGCGTGCCTCCTCGCTCTCTTCCTATACTTTGTTCAGATCATCCGTCAGCTCTATAAAAAGCCAACCGATGATGCCATTGCAAGAGATCAACAGCAGAATCATGACTCTTCCTCCATGCGCTCCACTCGTTTGCAAAGATTCTTGTCTCTCATGGATGAGAAAGAAGAGTCCAAGCACGAAAGCAAGAAGAGAAAGATCGATGGTTCAATGAACGATACATCGGGATCAACACGATCACGAGGTTTCGATAGAGAAAGAAGCTTCAATTCGGTAAATCCATTAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009606 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009628 GO:0009629 GO:0009630 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

933

Amino Acids

104.69

Weight (kDa)

8.92

Isoelectric Point (pI)

31.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	30 - 330	5.3e-15	Periplasmic binding protein
ANF_receptor	PF01094	46 - 404	3.3e-98	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	482 - 569	2.4e-09	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	487 - 808	2.4e-09	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	589 - 840	3.2e-39	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42540 AT1G42540 AT1G42540 AT1G42540
fragaria_vesca	FvH4_5g25730 FvH4_5g25730 FvH4_5g25730 FvH4_5g25730 FvH4_5g25730 FvH4_5g25730
malus_domestica	MD06G1006800.v1.1
prunus_persica	Prupe.5G008300_v2.0.a1 Prupe.5G008300_v2.0.a1 Prupe.5G008300_v2.0.a1 Prupe.5G008300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0216081
rosa_laevigata	RLG00000002596
rosa_multiflora	Rmu_sc0009767.1_g000004
rosa_roxburghii	Rroxscaffold_3G00243670
rosa_rugosa	Rorug07G0158700
rosa_samantha	Rh7AG295700 Rh7BG288100 Rh7CG316100 Rh7DG298600
rosa_wichuraiana	Rw7G025150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	582
Acc65I	GGTACC	1 cut(s)	2088
AccB1I	GGYRCC	1 cut(s)	2088
AccII	CGCG	9 cut(s)	704, 1126, 1365, 1419, 1452, 1910, 2225, 2450, 2516
AclI	AACGTT	1 cut(s)	1349
AclWI	GGATC	7 cut(s)	374, 764, 1823, 2072, 2398, 2411, 2746
AcoI	YGGCCR	1 cut(s)	1337
AcsI	RAATTY	4 cut(s)	169, 1446, 1723, 1841
AcuI	CTGAAG	2 cut(s)	1136, 2193
AcyI	GRCGYC	1 cut(s)	2511
AfaI	GTAC	5 cut(s)	354, 1520, 1933, 1974, 2090
AfiI	CCNNNNNNNGG	3 cut(s)	813, 2048, 2210
AflIII	ACRYGT	3 cut(s)	679, 1124, 1464
AgeI	ACCGGT	1 cut(s)	1214
AhdI	GACNNNNNGTC	1 cut(s)	1868
AhlI	ACTAGT	1 cut(s)	1693
AjnI	CCWGG	2 cut(s)	1733, 2091
AjuI	GAANNNNNNNTTGG	2 cut(s)	1386, 1418
AloI	GAACNNNNNNTCC	6 cut(s)	683, 715, 1203, 1235, 1932, 1964
Alw21I	GWGCWC	1 cut(s)	2457
Alw26I	GTCTC	4 cut(s)	1176, 1855, 2328, 2664
AlwI	GGATC	7 cut(s)	374, 764, 1823, 2072, 2398, 2411, 2746
AlwNI	CAGNNNCTG	2 cut(s)	1529, 2271
Ama87I	CYCGRG	2 cut(s)	972, 1987
AoxI	GGCC	2 cut(s)	1337, 1849
ApeKI	GCWGC	5 cut(s)	231, 536, 1499, 1682, 2029
ApoI	RAATTY	4 cut(s)	169, 1446, 1723, 1841
AsiGI	ACCGGT	1 cut(s)	1214
Asp700I	GAANNNNTTC	3 cut(s)	64, 825, 1466
Asp718I	GGTACC	1 cut(s)	2088
AspLEI	GCGC	3 cut(s)	1912, 2276, 2634
AspS9I	GGNCC	4 cut(s)	296, 1176, 1850, 2201
AsuC2I	CCSGG	3 cut(s)	973, 974, 1341
AsuHPI	GGTGA	3 cut(s)	1637, 2031, 2293
AsuII	TTCGAA	1 cut(s)	1019
AsuNHI	GCTAGC	1 cut(s)	2377
AvaI	CYCGRG	2 cut(s)	972, 1987
AvaII	GGWCC	3 cut(s)	296, 1176, 2201
BamHI	GGATCC	1 cut(s)	2403
BanI	GGYRCC	1 cut(s)	2088
BanII	GRGCYC	1 cut(s)	2457
BauI	CACGAG	1 cut(s)	2751
BbsI	GAAGAC	1 cut(s)	1483
Bbv12I	GWGCWC	1 cut(s)	2457
BbvI	GCAGC	5 cut(s)	243, 523, 1486, 1694, 2041
BccI	CCATC	7 cut(s)	730, 1082, 1362, 1607, 2051, 2192, 2708
BceAI	ACGGC	5 cut(s)	379, 621, 784, 1512, 2013
BcgI	CGANNNNNNTGC	2 cut(s)	536, 570
BciT130I	CCWGG	2 cut(s)	1735, 2093
BclI	TGATCA	1 cut(s)	1953
BcnI	CCSGG	3 cut(s)	973, 974, 1341
BcoDI	GTCTC	4 cut(s)	1176, 1855, 2328, 2664
BcuI	ACTAGT	1 cut(s)	1693
BfaI	CTAG	7 cut(s)	1694, 2001, 2153, 2331, 2345, 2378, 2441
BfmI	CTRYAG	3 cut(s)	229, 309, 1500
BglII	AGATCT	1 cut(s)	2353
BisI	GCNGC	7 cut(s)	232, 537, 1500, 1683, 2030, 2223, 2509
BlsI	GCNGC	7 cut(s)	233, 538, 1501, 1684, 2031, 2224, 2510
Bme1390I	CCNGG	5 cut(s)	973, 974, 1341, 1735, 2093
Bme18I	GGWCC	3 cut(s)	296, 1176, 2201
BmeRI	GACNNNNNGTC	1 cut(s)	1868
BmeT110I	CYCGRG	2 cut(s)	972, 1987
BmgT120I	GGNCC	4 cut(s)	296, 1176, 1850, 2201
BmiI	GGNNCC	6 cut(s)	1178, 1213, 1456, 1732, 2090, 2405
BmrFI	CCNGG	5 cut(s)	973, 974, 1341, 1735, 2093
BmsI	GCATC	5 cut(s)	204, 439, 467, 1694, 2575
BmtI	GCTAGC	1 cut(s)	2381
BoxI	GACNNNNGTC	1 cut(s)	2238
BpiI	GAAGAC	1 cut(s)	1483
BpmI	CTGGAG	2 cut(s)	1146, 2248
Bpu10I	CCTNAGC	1 cut(s)	2184
Bpu14I	TTCGAA	1 cut(s)	1019
BpuEI	CTTGAG	1 cut(s)	1382
BpuMI	CCSGG	3 cut(s)	973, 974, 1341
Bsa29I	ATCGAT	2 cut(s)	2012, 2712
BsaBI	GATNNNNATC	2 cut(s)	438, 644
BsaHI	GRCGYC	1 cut(s)	2511
BsaI	GGTCTC	1 cut(s)	1176
BsaJI	CCNNGG	5 cut(s)	662, 972, 973, 1117, 1734
BsaWI	WCCGGW	2 cut(s)	1214, 1647
BsaXI	ACNNNNNCTCC	6 cut(s)	683, 707, 713, 737, 2609, 2639
Bsc4I	CCNNNNNNNGG	3 cut(s)	813, 2048, 2210
Bse118I	RCCGGY	1 cut(s)	1214
Bse1I	ACTGG	2 cut(s)	1241, 1606
Bse3DI	GCAATG	1 cut(s)	2589
Bse8I	GATNNNNATC	2 cut(s)	438, 644
BseBI	CCWGG	2 cut(s)	1735, 2093
BseCI	ATCGAT	2 cut(s)	2012, 2712
BseDI	CCNNGG	5 cut(s)	662, 972, 973, 1117, 1734
BseGI	GGATG	6 cut(s)	454, 458, 595, 1373, 2553, 2674
BseJI	GATNNNNATC	2 cut(s)	438, 644
BseLI	CCNNNNNNNGG	3 cut(s)	813, 2048, 2210
BseMI	GCAATG	1 cut(s)	2589
BseMII	CTCAG	5 cut(s)	60, 202, 440, 801, 1263
BseNI	ACTGG	2 cut(s)	1241, 1606
BseRI	GAGGAG	2 cut(s)	2331, 2513
BseXI	GCAGC	5 cut(s)	243, 523, 1486, 1694, 2041
BseYI	CCCAGC	1 cut(s)	2313
Bsh1236I	CGCG	9 cut(s)	704, 1126, 1365, 1419, 1452, 1910, 2225, 2450, 2516
BshFI	GGCC	2 cut(s)	1339, 1851
BshNI	GGYRCC	1 cut(s)	2088
BshTI	ACCGGT	1 cut(s)	1214
BshVI	ATCGAT	2 cut(s)	2012, 2712
BsiHKAI	GWGCWC	1 cut(s)	2457
BsiHKCI	CYCGRG	2 cut(s)	972, 1987
BsiSI	CCGG	5 cut(s)	860, 973, 1215, 1340, 1648
BsiWI	CGTACG	1 cut(s)	1518
BslFI	GGGAC	3 cut(s)	1158, 2141, 2505
BslI	CCNNNNNNNGG	3 cut(s)	813, 2048, 2210
BsmAI	GTCTC	4 cut(s)	1176, 1855, 2328, 2664
BsmFI	GGGAC	3 cut(s)	1158, 2141, 2505
BsnI	GGCC	2 cut(s)	1339, 1851
Bso31I	GGTCTC	1 cut(s)	1176
BsoBI	CYCGRG	2 cut(s)	972, 1987
Bsp119I	TTCGAA	1 cut(s)	1019
Bsp1286I	GDGCHC	1 cut(s)	2457
BspANI	GGCC	2 cut(s)	1339, 1851
BspCNI	CTCAG	5 cut(s)	61, 201, 439, 802, 1264
BspDI	ATCGAT	2 cut(s)	2012, 2712
BspFNI	CGCG	9 cut(s)	704, 1126, 1365, 1419, 1452, 1910, 2225, 2450, 2516
BspHI	TCATGA	2 cut(s)	627, 2614
BspLI	GGNNCC	6 cut(s)	1178, 1213, 1456, 1732, 2090, 2405
BspMAI	CTGCAG	2 cut(s)	233, 1504
BspOI	GCTAGC	1 cut(s)	2381
BspPI	GGATC	7 cut(s)	374, 764, 1823, 2072, 2398, 2411, 2746
BspT104I	TTCGAA	1 cut(s)	1019
BspT107I	GGYRCC	1 cut(s)	2088
BspTNI	GGTCTC	1 cut(s)	1176
BsrDI	GCAATG	1 cut(s)	2589
BsrFI	RCCGGY	1 cut(s)	1214
BsrI	ACTGG	2 cut(s)	1241, 1606
BssAI	RCCGGY	1 cut(s)	1214
BssECI	CCNNGG	5 cut(s)	662, 972, 973, 1117, 1734
BssNI	GRCGYC	1 cut(s)	2511
BssSI	CACGAG	1 cut(s)	2751
Bst2BI	CACGAG	1 cut(s)	2751
Bst2UI	CCWGG	2 cut(s)	1735, 2093
Bst6I	CTCTTC	8 cut(s)	796, 1419, 2041, 2261, 2537, 2626, 2673, 2696
BstACI	GRCGYC	1 cut(s)	2511
BstBI	TTCGAA	1 cut(s)	1019
BstC8I	GCNNGC	5 cut(s)	555, 1409, 2379, 2434, 2518
BstF5I	GGATG	6 cut(s)	454, 458, 595, 1373, 2553, 2674
BstFNI	CGCG	9 cut(s)	704, 1126, 1365, 1419, 1452, 1910, 2225, 2450, 2516
BstHHI	GCGC	3 cut(s)	1912, 2276, 2634
BstMAI	GTCTC	4 cut(s)	1176, 1855, 2328, 2664
BstMWI	GCNNNNNNNGC	4 cut(s)	140, 920, 2214, 2517
BstNI	CCWGG	2 cut(s)	1735, 2093
BstNSI	RCATGY	5 cut(s)	637, 683, 1331, 1468, 2436
BstPAI	GACNNNNGTC	1 cut(s)	2238
BstSCI	CCNGG	5 cut(s)	971, 972, 1339, 1733, 2091
BstSFI	CTRYAG	3 cut(s)	229, 309, 1500
BstUI	CGCG	9 cut(s)	704, 1126, 1365, 1419, 1452, 1910, 2225, 2450, 2516
BstV1I	GCAGC	5 cut(s)	243, 523, 1486, 1694, 2041
BstV2I	GAAGAC	1 cut(s)	1483
BstX2I	RGATCY	3 cut(s)	1815, 2353, 2403
BstYI	RGATCY	3 cut(s)	1815, 2353, 2403
Bsu15I	ATCGAT	2 cut(s)	2012, 2712
BsuRI	GGCC	2 cut(s)	1339, 1851
BsuTUI	ATCGAT	2 cut(s)	2012, 2712
BtsCI	GGATG	6 cut(s)	454, 458, 595, 1373, 2553, 2674
BtsI	GCAGTG	2 cut(s)	1100, 1509
BtsIMutI	CAGTG	2 cut(s)	1100, 1509
Cac8I	GCNNGC	5 cut(s)	555, 1409, 2379, 2434, 2518
CaiI	CAGNNNCTG	2 cut(s)	1529, 2271
CciI	TCATGA	2 cut(s)	627, 2614
CfoI	GCGC	3 cut(s)	1912, 2276, 2634
Cfr10I	RCCGGY	1 cut(s)	1214
Cfr13I	GGNCC	4 cut(s)	296, 1176, 1850, 2201
Cfr9I	CCCGGG	1 cut(s)	972
ClaI	ATCGAT	2 cut(s)	2012, 2712
CseI	GACGC	2 cut(s)	836, 2500
CsiI	ACCWGGT	1 cut(s)	2091
Csp6I	GTAC	5 cut(s)	353, 1519, 1932, 1973, 2089
CspAI	ACCGGT	1 cut(s)	1214
CviQI	GTAC	5 cut(s)	353, 1519, 1932, 1973, 2089
DraI	TTTAAA	3 cut(s)	874, 994, 1714
DriI	GACNNNNNGTC	1 cut(s)	1868
EaeI	YGGCCR	1 cut(s)	1337
Eam1104I	CTCTTC	8 cut(s)	796, 1419, 2041, 2261, 2537, 2626, 2673, 2696
Eam1105I	GACNNNNNGTC	1 cut(s)	1868
EarI	CTCTTC	8 cut(s)	796, 1419, 2041, 2261, 2537, 2626, 2673, 2696
Ecl136II	GAGCTC	1 cut(s)	2455
Eco24I	GRGCYC	1 cut(s)	2457
Eco31I	GGTCTC	1 cut(s)	1176
Eco32I	GATATC	2 cut(s)	327, 1114
Eco47I	GGWCC	3 cut(s)	296, 1176, 2201
Eco53kI	GAGCTC	1 cut(s)	2455
Eco57I	CTGAAG	2 cut(s)	1136, 2193
Eco88I	CYCGRG	2 cut(s)	972, 1987
EcoICRI	GAGCTC	1 cut(s)	2455
EcoRI	GAATTC	3 cut(s)	169, 1723, 1841
EcoRII	CCWGG	2 cut(s)	1733, 2091
EcoRV	GATATC	2 cut(s)	327, 1114
EcoT38I	GRGCYC	1 cut(s)	2457
FalI	AAGNNNNNCTT	4 cut(s)	822, 854, 1089, 1121
FaqI	GGGAC	3 cut(s)	1158, 2141, 2505
FauI	CCCGC	3 cut(s)	580, 814, 1201
FauNDI	CATATG	7 cut(s)	321, 333, 934, 1581, 1678, 1958, 2504
FbaI	TGATCA	1 cut(s)	1953
Fnu4HI	GCNGC	7 cut(s)	232, 537, 1500, 1683, 2030, 2223, 2509
FokI	GGATG	6 cut(s)	445, 461, 582, 1380, 2540, 2681
FriOI	GRGCYC	1 cut(s)	2457
Fsp4HI	GCNGC	7 cut(s)	232, 537, 1500, 1683, 2030, 2223, 2509
FspBI	CTAG	7 cut(s)	1694, 2001, 2153, 2331, 2345, 2378, 2441
GlaI	GCGC	3 cut(s)	1911, 2275, 2633
GluI	GCNGC	7 cut(s)	232, 537, 1500, 1683, 2030, 2223, 2509
GsaI	CCCAGC	1 cut(s)	2317
GsuI	CTGGAG	2 cut(s)	1146, 2248
HaeIII	GGCC	2 cut(s)	1339, 1851
HapII	CCGG	5 cut(s)	860, 973, 1215, 1340, 1648
HgaI	GACGC	2 cut(s)	836, 2500
HhaI	GCGC	3 cut(s)	1912, 2276, 2634
Hin1I	GRCGYC	1 cut(s)	2511
Hin6I	GCGC	3 cut(s)	1910, 2274, 2632
HinP1I	GCGC	3 cut(s)	1910, 2274, 2632
HincII	GTYRAC	2 cut(s)	1308, 2233
HindII	GTYRAC	2 cut(s)	1308, 2233
HindIII	AAGCTT	3 cut(s)	551, 2482, 2773
HpaII	CCGG	5 cut(s)	860, 973, 1215, 1340, 1648
HphI	GGTGA	3 cut(s)	1637, 2031, 2293
Hpy166II	GTNNAC	9 cut(s)	353, 593, 851, 1158, 1308, 1353, 1934, 2233, 2301
Hpy8I	GTNNAC	9 cut(s)	353, 593, 851, 1158, 1308, 1353, 1934, 2233, 2301
Hpy99I	CGWCG	1 cut(s)	2516
HpyCH4IV	ACGT	3 cut(s)	1040, 1349, 2239
HpyF10VI	GCNNNNNNNGC	4 cut(s)	140, 920, 2214, 2517
HpySE526I	ACGT	3 cut(s)	1040, 1349, 2239
Hsp92I	GRCGYC	1 cut(s)	2511
HspAI	GCGC	3 cut(s)	1910, 2274, 2632
KpnI	GGTACC	1 cut(s)	2092
Ksp22I	TGATCA	1 cut(s)	1953
LmnI	GCTCC	3 cut(s)	1730, 2452, 2639
Lsp1109I	GCAGC	5 cut(s)	243, 523, 1486, 1694, 2041
LweI	GCATC	5 cut(s)	204, 439, 467, 1694, 2575
MabI	ACCWGGT	1 cut(s)	2091
MaeI	CTAG	7 cut(s)	1694, 2001, 2153, 2331, 2345, 2378, 2441
MaeII	ACGT	3 cut(s)	1040, 1349, 2239
MaeIII	GTNAC	9 cut(s)	373, 396, 801, 1275, 1424, 1639, 1774, 1870, 2145
MflI	RGATCY	3 cut(s)	1815, 2353, 2403
MhlI	GDGCHC	1 cut(s)	2457
MluCI	AATT	9 cut(s)	169, 573, 1446, 1606, 1723, 1841, 1875, 2052, 2779
MluI	ACGCGT	1 cut(s)	1124
MlyI	GAGTC	6 cut(s)	782, 933, 2153, 2330, 2612, 2690
MmeI	TCCRAC	2 cut(s)	461, 798
MroXI	GAANNNNTTC	3 cut(s)	64, 825, 1466
MseI	TTAA	9 cut(s)	612, 711, 873, 927, 993, 1107, 1139, 1713, 2192
MslI	CAYNNNNRTG	2 cut(s)	632, 1580
MspA1I	CMGCKG	3 cut(s)	192, 234, 809
MspI	CCGG	5 cut(s)	860, 973, 1215, 1340, 1648
MspR9I	CCNGG	5 cut(s)	973, 974, 1341, 1735, 2093
MvaI	CCWGG	2 cut(s)	1735, 2093
MvnI	CGCG	9 cut(s)	704, 1126, 1365, 1419, 1452, 1910, 2225, 2450, 2516
MwoI	GCNNNNNNNGC	4 cut(s)	140, 920, 2214, 2517
NciI	CCSGG	3 cut(s)	973, 974, 1341
NdeI	CATATG	7 cut(s)	321, 333, 934, 1581, 1678, 1958, 2504
NheI	GCTAGC	1 cut(s)	2377
NlaIV	GGNNCC	6 cut(s)	1178, 1213, 1456, 1732, 2090, 2405
NmuCI	GTSAC	3 cut(s)	1774, 1870, 2145
NspI	RCATGY	5 cut(s)	637, 683, 1331, 1468, 2436
NspV	TTCGAA	1 cut(s)	1019
PaeI	GCATGC	1 cut(s)	2436
PaeR7I	CTCGAG	1 cut(s)	1987
PagI	TCATGA	2 cut(s)	627, 2614
PciI	ACATGT	2 cut(s)	679, 1464
PcsI	WCGNNNNNNNCGW	1 cut(s)	2454
PdmI	GAANNNNTTC	3 cut(s)	64, 825, 1466
Pfl23II	CGTACG	1 cut(s)	1518
PinAI	ACCGGT	1 cut(s)	1214
PkrI	GCNGC	7 cut(s)	233, 538, 1501, 1684, 2031, 2224, 2510
PleI	GAGTC	6 cut(s)	782, 933, 2152, 2330, 2612, 2689
PpsI	GAGTC	6 cut(s)	782, 933, 2152, 2330, 2612, 2689
PscI	ACATGT	2 cut(s)	679, 1464
PshAI	GACNNNNGTC	1 cut(s)	2238
PsiI	TTATAA	1 cut(s)	582
Psp124BI	GAGCTC	1 cut(s)	2457
Psp1406I	AACGTT	1 cut(s)	1349
Psp6I	CCWGG	2 cut(s)	1733, 2091
PspFI	CCCAGC	1 cut(s)	2313
PspGI	CCWGG	2 cut(s)	1733, 2091
PspLI	CGTACG	1 cut(s)	1518
PspN4I	GGNNCC	6 cut(s)	1178, 1213, 1456, 1732, 2090, 2405
PspPI	GGNCC	4 cut(s)	296, 1176, 1850, 2201
PspXI	VCTCGAGB	1 cut(s)	1987
PsrI	GAACNNNNNNTAC	2 cut(s)	336, 368
PstI	CTGCAG	2 cut(s)	233, 1504
PstNI	CAGNNNCTG	2 cut(s)	1529, 2271
PsuI	RGATCY	3 cut(s)	1815, 2353, 2403
RsaI	GTAC	5 cut(s)	354, 1520, 1933, 1974, 2090
RsaNI	GTAC	5 cut(s)	353, 1519, 1932, 1973, 2089
RseI	CAYNNNNRTG	2 cut(s)	632, 1580
SacI	GAGCTC	1 cut(s)	2457
SaqAI	TTAA	9 cut(s)	612, 711, 873, 927, 993, 1107, 1139, 1713, 2192
SatI	GCNGC	7 cut(s)	232, 537, 1500, 1683, 2030, 2223, 2509
Sau96I	GGNCC	4 cut(s)	296, 1176, 1850, 2201
SchI	GAGTC	6 cut(s)	782, 933, 2153, 2330, 2612, 2690
ScrFI	CCNGG	5 cut(s)	973, 974, 1341, 1735, 2093
SduI	GDGCHC	1 cut(s)	2457
SexAI	ACCWGGT	1 cut(s)	2091
SfaNI	GCATC	5 cut(s)	204, 439, 467, 1694, 2575
SfcI	CTRYAG	3 cut(s)	229, 309, 1500
Sfr274I	CTCGAG	1 cut(s)	1987
SfuI	TTCGAA	1 cut(s)	1019
SinI	GGWCC	3 cut(s)	296, 1176, 2201
SlaI	CTCGAG	1 cut(s)	1987
SmaI	CCCGGG	1 cut(s)	974
SmiMI	CAYNNNNRTG	2 cut(s)	632, 1580
SmlI	CTYRAG	2 cut(s)	1397, 1987
SmoI	CTYRAG	2 cut(s)	1397, 1987
SpeI	ACTAGT	1 cut(s)	1693
SphI	GCATGC	1 cut(s)	2436
Sse9I	AATT	9 cut(s)	169, 573, 1446, 1606, 1723, 1841, 1875, 2052, 2779
SspMI	CTAG	7 cut(s)	1694, 2001, 2153, 2331, 2345, 2378, 2441
SstI	GAGCTC	1 cut(s)	2457
StyD4I	CCNGG	5 cut(s)	971, 972, 1339, 1733, 2091
TaiI	ACGT	3 cut(s)	1043, 1352, 2242
TasI	AATT	9 cut(s)	169, 573, 1446, 1606, 1723, 1841, 1875, 2052, 2779
TatI	WGTACW	2 cut(s)	1931, 1972
TauI	GCSGC	2 cut(s)	2225, 2511
Tru1I	TTAA	9 cut(s)	612, 711, 873, 927, 993, 1107, 1139, 1713, 2192
Tru9I	TTAA	9 cut(s)	612, 711, 873, 927, 993, 1107, 1139, 1713, 2192
TscAI	CASTG	2 cut(s)	1107, 1509
TseFI	GTSAC	3 cut(s)	1774, 1870, 2145
TseI	GCWGC	5 cut(s)	231, 536, 1499, 1682, 2029
Tsp45I	GTSAC	3 cut(s)	1774, 1870, 2145
TspDTI	ATGAA	9 cut(s)	17, 165, 403, 644, 1854, 2091, 2438, 2462, 2738
TspGWI	ACGGA	4 cut(s)	396, 779, 2403, 2546
TspMI	CCCGGG	1 cut(s)	972
TspRI	CASTG	2 cut(s)	1107, 1509
VpaK11BI	GGWCC	3 cut(s)	296, 1176, 2201
XapI	RAATTY	4 cut(s)	169, 1446, 1723, 1841
XbaI	TCTAGA	1 cut(s)	2440
XceI	RCATGY	5 cut(s)	637, 683, 1331, 1468, 2436
XhoI	CTCGAG	1 cut(s)	1987
XmaI	CCCGGG	1 cut(s)	972
XmnI	GAANNNNTTC	3 cut(s)	64, 825, 1466
XspI	CTAG	7 cut(s)	1694, 2001, 2153, 2331, 2345, 2378, 2441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.