Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0006988

Physical Location & Seq

Genomic Coordinates Forward (+)

17231880 .. 17238332

Gene Structure 6453 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g25730.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2829 bp

ATGTTGTCATTTAAGATGGAATTGGTTTGGGTTTGTCCCTTGGTGGTTCTTTATCTTGGGGTGTTCTCATTTGGGTCTAGTAAGAATGTTTCTTCAAGACCAGCTGTGGTCAACATTGGAGCTCTTTTCACGATGGACTCTACGATTGGTAAAGTTGCCAAGATTGCTATTGAGGAAGCGGTGAAAGATGTGAACTCCAATTTCAGCATTCTCCATGGGACCAAACTTGTTGTGAAAATGCAGAATACCAATTGCAGTGGGTTTCTTGGAATGGTTGAAGCTTTGCAATTCATGGAGACTGATATCGTCGCCATTATAGGCCCACAATCTTCTGTAGTTGCACATATTGTATCCCATGTTGCAAATGAACTCCAAGTACCACTATTGTCATTTGCAGCCACAGACCCAACTCTCTCATCCCTTCAGTTCCCATATTTTATTAGGACAACACAGAGTGATTTGTATCAAATGACTGCAGTTGCACAAATTGTTGATCATTATGGGTGGAGAGATGTTATTGCCATTTTTGTAGACGATGATTACGGCCGTAATGGCATATCAGCTTTAGATGATAAACTTGCTGAGAGACGCTGTAAAATTTCATACAAGTTGGCAATTCCCCCTGGACCGGCAGCTAATCGGAGTGACATCATGGATCTGCTTATTAAGGTTGCCTTATTGGAATCTCGAGTTATAGTTCTTCATGTGAATGCTGATTCAGGTTTCATGGTTCTTGCTGTGGCACAGTATCTTAAAATGACGGGTGATGGTTTTGTATGGATAGCTACAGATTGGCTTTCATCTGTTTTAGATTCTGCTTTTCCTCTTCCTTCTGAAATTATGGATACATTGCAAGGAGTTCTTGTTTTGCGGCTACATACACCAGATTCAGATAGAAAGAGGGCCTTCTTTTCTAAGTGGAACAAGATAACTGGTGGTTCTCTGGGACTGCATACTTATGGGCTTCATGCTTATGATTCTGTTTGGCTGGTAGCTCATGCTATTGATGCTTTTTTCAACCAGGGTGGGGTTATTTCATTCTCTAATGATTCTAGGATAGAAGCTGTAGAACAAGGTGGTAGCCTTCACCTTGACGCAATGAGCATTTTTGATGATGGACCACTCCTGTTGAAGAACATATTGCAAAGTAACCTTGTTGGTTTGACAGGTCCCATCAAGTTTGATTCAGAAAGGGCTCTTGCTCTTCCAGCATATGATATTATTAATGTGGTTGGAACTGGGTTTCGACGAATTGGTTACTGGTCCAACTATTCTGGGTTATCAACTGTACCTCCTGAGACTCTCTATTCAAAGCCAGCTAATCGTTCCAGTGCAAATCAACAGTTATATAGTGTTGTCTGGCCAGGGGAGACATTAACGAAGCCCCGTGGTTGGGTTTTCCCAAACGATGGGAAACTCTTGAGAATTGGTGTGCCTATTCGGGTCAGTTACCGGGAATTTGTAATGCCAGTTCAGGGAACTGATACTTTCAAGGGTTTCTGCATAGATGTATTCAATGCTGCTGTAAACTTGTTGCCATATGCTGTTCCATGCAAGTTTATCCCTTTTGGAGATGGTCTGAAAAATCCAAGCTACACAGAGCTTGTGATATCTATCACAACTGGGGTCTTTGATGCTGCTATTGGTGACATTGCCATTGTTACAAATCGAACGAAGATTGTGGATTTTACACAGCCATATGCTGCATCTGGACTTGTTGTTGTGGCCCCCTTTAAAAAAATGAATTCTGGTGCTTGGGCCTTCCTTCGACCATTTACGGCACACATGTGGATAGTCACTGCTGCTTCCTTTCTTGTTATTGGTATAGTTGTATGGATTTTGGAGCATAGGATGAATGATGAATTCAGGGGTCCACCTAAGAAGCAACTTATAACTATCTTGTGGTTTAGCCTCTCAACTCTATTCTTTGCCCATAGAGAGAACACTGTGAGCACCCTTGGTCGAGTAGTGCTACTTATATGGCTATTTGTGGTTTTGATAATCAACTCTAGCTACACTGCTAGTCTGACATCAATCCTCACAGTACAGCAGCTATCTTCTCCTATCAAAGGAATTGAAAGTTTGAAAAACAGTGGTGAGCCAATCGGGTATCAAGTGGGTTCCTTTGCTGAGCATTATTTGAGTGAGGAGCTCGGCATATCCAAGTCCAGGCTCATTGCCCTTGGCTCTCCTCTAGCCTATGCTGAGGCACTTCAGCTTGGTCCTAAAAAGGGAGGTGTTGCTGCGGTGGTTGATGAACGTCCTTATGTTGAGCTATTCCTCTCAACACAGTGCAAGTTTCGGGTTGTAGGTCAAGAGTTCACGAAAAGCGGCTGGGGTTTTGCATTTCCACGAGATTCTCCTTTAGCTGTTGACATTTCAACTGCAATTCTACAATTATCGGAGAATGGTGATCTGCAACGGATCCATGATAAATGGTTGATGCAAAGCTCTTGCAGTTTTGAGAGCACTGAAATTGAATCAGACCAGCTTCAACTCAGAAGCTTTTGGGGCCTCTTTCTCATATGTGGAATTGCTTGCTTCATTGCTCTCCTTGTATATTTTTTGCAAATTATGAACAAGCTACGTCATGCTGACCCACCTCAGAGTGTTTTAACTAGTCCTGGTGTCTCACAATCTGGGCGACTCCGGCGATTTTTATCAATAATTGATAAAAAGGCTGACCAGTCCAATAGTGGAAGTAAAAAAAGGAAAGTTATTAGATCACTATCCGACAACGATAAAGATGGTAAGTTGGGTTGGACTCCCAAGAAGAAACAAGCAGAAATGACTGATATGGGCGAGGGTGACATCAAGTCCAGCAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009606 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009628 GO:0009629 GO:0009630 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

943

Amino Acids

103.68

Weight (kDa)

7.59

Isoelectric Point (pI)

40.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	37 - 338	5.5e-14	Periplasmic binding protein
ANF_receptor	PF01094	54 - 412	2.5e-93	Receptor family ligand binding region
SBP_bac_3	PF00497	482 - 815	1.2e-10	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	489 - 576	3.4e-08	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	594 - 847	2.6e-39	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42540 AT1G42540 AT1G42540 AT1G42540
fragaria_vesca	FvH4_5g25730 FvH4_5g25730 FvH4_5g25730 FvH4_5g25730 FvH4_5g25730 FvH4_5g25730
malus_domestica	MD06G1006800.v1.1
prunus_persica	Prupe.5G008300_v2.0.a1 Prupe.5G008300_v2.0.a1 Prupe.5G008300_v2.0.a1 Prupe.5G008300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0216081
rosa_laevigata	RLG00000002596
rosa_multiflora	Rmu_sc0009767.1_g000004
rosa_roxburghii	Rroxscaffold_3G00243670
rosa_rugosa	Rorug07G0158700
rosa_samantha	Rh7AG295700 Rh7BG288100 Rh7CG316100 Rh7DG298600
rosa_wichuraiana	Rw7G025150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1892
AccB7I	CCANNNNNTGG	1 cut(s)	1409
AccI	GTMKAC	1 cut(s)	531
AciI	CCGC	4 cut(s)	179, 871, 2246, 2331
AclWI	GGATC	3 cut(s)	663, 2419, 2432
AcoI	YGGCCR	2 cut(s)	544, 1361
AcsI	RAATTY	4 cut(s)	597, 1457, 1744, 1862
AcuI	CTGAAG	2 cut(s)	407, 2198
AdeI	CACNNNGTG	1 cut(s)	455
AfaI	GTAC	3 cut(s)	378, 1290, 2046
AfiI	CCNNNNNNNGG	9 cut(s)	628, 1027, 1392, 1393, 1409, 1475, 2069, 2169, 2231
AflIII	ACRYGT	1 cut(s)	1785
AhdI	GACNNNNNGTC	1 cut(s)	2815
AhlI	ACTAGT	1 cut(s)	2618
AjnI	CCWGG	5 cut(s)	622, 1020, 1363, 2168, 2623
AleI	CACNNNNGTG	1 cut(s)	1786
Alw21I	GWGCWC	4 cut(s)	124, 1955, 2154, 2471
Alw26I	GTCTC	5 cut(s)	290, 580, 1292, 1364, 2635
AlwI	GGATC	3 cut(s)	663, 2419, 2432
Ama87I	CYCGRG	1 cut(s)	687
AoxI	GGCC	7 cut(s)	319, 544, 903, 1361, 1725, 1758, 2512
ApeKI	GCWGC	8 cut(s)	395, 632, 1520, 1637, 1703, 1802, 2050, 2243
ApoI	RAATTY	4 cut(s)	597, 1457, 1744, 1862
AseI	ATTAAT	1 cut(s)	1224
AsuC2I	CCSGG	1 cut(s)	1454
AsuHPI	GGTGA	7 cut(s)	193, 776, 1079, 1658, 2108, 2423, 2819
AvaI	CYCGRG	1 cut(s)	687
AvaII	GGWCC	7 cut(s)	219, 626, 1118, 1169, 1263, 1871, 2222
BalI	TGGCCA	1 cut(s)	1363
BamHI	GGATCC	1 cut(s)	2424
BanII	GRGCYC	3 cut(s)	124, 1198, 2154
BauI	CACGAG	1 cut(s)	2352
Bbv12I	GWGCWC	4 cut(s)	124, 1955, 2154, 2471
BbvCI	CCTCAGC	1 cut(s)	2205
BbvI	GCAGC	8 cut(s)	407, 644, 1507, 1624, 1690, 1789, 2062, 2230
BccI	CCATC	8 cut(s)	10, 127, 761, 1109, 1181, 1403, 1568, 2741
BceAI	ACGGC	3 cut(s)	531, 559, 1794
BciT130I	CCWGG	5 cut(s)	624, 1022, 1365, 2170, 2625
BciVI	GTATCC	2 cut(s)	361, 838
BclI	TGATCA	1 cut(s)	493
BcnI	CCSGG	1 cut(s)	1454
BcoDI	GTCTC	5 cut(s)	290, 580, 1292, 1364, 2635
BcuI	ACTAGT	1 cut(s)	2618
BfaI	CTAG	6 cut(s)	78, 1053, 2010, 2022, 2195, 2619
BfmI	CTRYAG	4 cut(s)	333, 474, 786, 1065
BfuI	GTATCC	2 cut(s)	361, 838
BglI	GCCNNNNNGGC	1 cut(s)	552
BlpI	GCTNAGC	1 cut(s)	2130
Bme1390I	CCNGG	6 cut(s)	624, 1022, 1365, 1454, 2170, 2625
Bme18I	GGWCC	7 cut(s)	219, 626, 1118, 1169, 1263, 1871, 2222
BmeRI	GACNNNNNGTC	1 cut(s)	2815
BmeT110I	CYCGRG	1 cut(s)	687
BmiI	GGNNCC	7 cut(s)	220, 1171, 1728, 1872, 2122, 2426, 2513
BmrFI	CCNGG	6 cut(s)	624, 1022, 1365, 1454, 2170, 2625
BmrI	ACTGGG	2 cut(s)	1248, 1632
BmsI	GCATC	4 cut(s)	997, 1624, 1715, 2433
BmuI	ACTGGG	2 cut(s)	1248, 1632
Bpu10I	CCTNAGC	1 cut(s)	2205
Bpu1102I	GCTNAGC	1 cut(s)	2130
BpuEI	CTTGAG	1 cut(s)	1441
BpuMI	CCSGG	1 cut(s)	1454
BsaBI	GATNNNNATC	4 cut(s)	462, 1613, 2659, 2728
BsaJI	CCNNGG	8 cut(s)	39, 214, 622, 1021, 1364, 1387, 1957, 2182
BsaXI	ACNNNNNCTCC	4 cut(s)	849, 879, 1276, 1306
Bsc4I	CCNNNNNNNGG	9 cut(s)	628, 1027, 1392, 1393, 1409, 1475, 2069, 2169, 2231
Bse118I	RCCGGY	1 cut(s)	628
Bse1I	ACTGG	7 cut(s)	937, 1243, 1265, 1329, 1469, 1627, 2686
Bse3DI	GCAATG	5 cut(s)	848, 1104, 1650, 2175, 2544
Bse8I	GATNNNNATC	4 cut(s)	462, 1613, 2659, 2728
BseBI	CCWGG	5 cut(s)	624, 1022, 1365, 2170, 2625
BseDI	CCNNGG	8 cut(s)	39, 214, 622, 1021, 1364, 1387, 1957, 2182
BseGI	GGATG	2 cut(s)	416, 1857
BseJI	GATNNNNATC	4 cut(s)	462, 1613, 2659, 2728
BseLI	CCNNNNNNNGG	9 cut(s)	628, 1027, 1392, 1393, 1409, 1475, 2069, 2169, 2231
BseMI	GCAATG	5 cut(s)	848, 1104, 1650, 2175, 2544
BseMII	CTCAG	6 cut(s)	573, 1287, 2121, 2196, 2512, 2618
BseNI	ACTGG	7 cut(s)	937, 1243, 1265, 1329, 1469, 1627, 2686
BseRI	GAGGAG	2 cut(s)	2162, 2181
BseX3I	CGGCCG	1 cut(s)	544
BseXI	GCAGC	8 cut(s)	407, 644, 1507, 1624, 1690, 1789, 2062, 2230
BseYI	CCCAGC	1 cut(s)	2334
Bsh1285I	CGRYCG	1 cut(s)	547
BshFI	GGCC	7 cut(s)	321, 546, 905, 1363, 1727, 1760, 2514
BsiEI	CGRYCG	1 cut(s)	547
BsiHKAI	GWGCWC	4 cut(s)	124, 1955, 2154, 2471
BsiHKCI	CYCGRG	1 cut(s)	687
BsiSI	CCGG	3 cut(s)	629, 1453, 2650
BslFI	GGGAC	4 cut(s)	21, 232, 960, 1155
BslI	CCNNNNNNNGG	9 cut(s)	628, 1027, 1392, 1393, 1409, 1475, 2069, 2169, 2231
BsmAI	GTCTC	5 cut(s)	290, 580, 1292, 1364, 2635
BsmBI	CGTCTC	1 cut(s)	580
BsmFI	GGGAC	4 cut(s)	21, 232, 960, 1155
BsmI	GAATGC	2 cut(s)	207, 715
BsnI	GGCC	7 cut(s)	321, 546, 905, 1363, 1727, 1760, 2514
BsoBI	CYCGRG	1 cut(s)	687
Bsp1286I	GDGCHC	5 cut(s)	124, 1198, 1955, 2154, 2471
Bsp143I	GATC	5 cut(s)	493, 655, 2413, 2424, 2723
Bsp1720I	GCTNAGC	1 cut(s)	2130
Bsp19I	CCATGG	1 cut(s)	214
BspACI	CCGC	4 cut(s)	179, 871, 2246, 2331
BspANI	GGCC	7 cut(s)	321, 546, 905, 1363, 1727, 1760, 2514
BspCNI	CTCAG	6 cut(s)	574, 1288, 2122, 2197, 2511, 2617
BspLI	GGNNCC	7 cut(s)	220, 1171, 1728, 1872, 2122, 2426, 2513
BspMAI	CTGCAG	1 cut(s)	478
BspPI	GGATC	3 cut(s)	663, 2419, 2432
BspQI	GCTCTTC	1 cut(s)	1209
BsrDI	GCAATG	5 cut(s)	848, 1104, 1650, 2175, 2544
BsrFI	RCCGGY	1 cut(s)	628
BsrI	ACTGG	7 cut(s)	937, 1243, 1265, 1329, 1469, 1627, 2686
BssAI	RCCGGY	1 cut(s)	628
BssECI	CCNNGG	8 cut(s)	39, 214, 622, 1021, 1364, 1387, 1957, 2182
BssMI	GATC	5 cut(s)	493, 655, 2413, 2424, 2723
BssSI	CACGAG	1 cut(s)	2352
BssT1I	CCWWGG	4 cut(s)	39, 214, 1957, 2182
Bst2BI	CACGAG	1 cut(s)	2352
Bst2UI	CCWGG	5 cut(s)	624, 1022, 1365, 2170, 2625
Bst4CI	ACNGT	7 cut(s)	747, 1288, 1344, 1948, 2044, 2093, 2292
Bst6I	CTCTTC	2 cut(s)	831, 1209
BstC8I	GCNNGC	2 cut(s)	1317, 2539
BstDEI	CTNAG	8 cut(s)	582, 915, 1296, 1878, 2130, 2205, 2498, 2604
BstDSI	CCRYGG	2 cut(s)	214, 1387
BstENI	CCTNNNNNAGG	1 cut(s)	2067
BstF5I	GGATG	2 cut(s)	416, 1857
BstKTI	GATC	5 cut(s)	496, 658, 2416, 2427, 2726
BstMAI	GTCTC	5 cut(s)	290, 580, 1292, 1364, 2635
BstMBI	GATC	5 cut(s)	493, 655, 2413, 2424, 2723
BstMCI	CGRYCG	1 cut(s)	547
BstMWI	GCNNNNNNNGC	6 cut(s)	164, 552, 1007, 1208, 2511, 2650
BstNI	CCWGG	5 cut(s)	624, 1022, 1365, 2170, 2625
BstNSI	RCATGY	1 cut(s)	1789
BstSCI	CCNGG	6 cut(s)	622, 1020, 1363, 1452, 2168, 2623
BstSFI	CTRYAG	4 cut(s)	333, 474, 786, 1065
BstV1I	GCAGC	8 cut(s)	407, 644, 1507, 1624, 1690, 1789, 2062, 2230
BstX2I	RGATCY	2 cut(s)	655, 2424
BstYI	RGATCY	2 cut(s)	655, 2424
BstZI	CGGCCG	1 cut(s)	544
BsuI	GTATCC	2 cut(s)	361, 838
BsuRI	GGCC	7 cut(s)	321, 546, 905, 1363, 1727, 1760, 2514
BtgI	CCRYGG	2 cut(s)	214, 1387
BtsCI	GGATG	2 cut(s)	416, 1857
BtsI	GCAGTG	3 cut(s)	262, 1797, 2016
BtsIMutI	CAGTG	8 cut(s)	262, 1336, 1797, 1944, 2016, 2098, 2297, 2469
Cac8I	GCNNGC	2 cut(s)	1317, 2539
Cfr10I	RCCGGY	1 cut(s)	628
CseI	GACGC	2 cut(s)	597, 1103
Csp6I	GTAC	3 cut(s)	377, 1289, 2045
CspCI	CAANNNNNGTGG	6 cut(s)	238, 273, 1006, 1041, 1110, 1145
CviQI	GTAC	3 cut(s)	377, 1289, 2045
DdeI	CTNAG	8 cut(s)	582, 915, 1296, 1878, 2130, 2205, 2498, 2604
DpnI	GATC	5 cut(s)	495, 657, 2415, 2426, 2725
DpnII	GATC	5 cut(s)	493, 655, 2413, 2424, 2723
DraI	TTTAAA	1 cut(s)	1735
DraIII	CACNNNGTG	1 cut(s)	455
DriI	GACNNNNNGTC	1 cut(s)	2815
EaeI	YGGCCR	2 cut(s)	544, 1361
EagI	CGGCCG	1 cut(s)	544
Eam1104I	CTCTTC	2 cut(s)	831, 1209
Eam1105I	GACNNNNNGTC	1 cut(s)	2815
EarI	CTCTTC	2 cut(s)	831, 1209
Ecl136II	GAGCTC	2 cut(s)	122, 2152
EclXI	CGGCCG	1 cut(s)	544
Eco130I	CCWWGG	4 cut(s)	39, 214, 1957, 2182
Eco24I	GRGCYC	3 cut(s)	124, 1198, 2154
Eco32I	GATATC	2 cut(s)	304, 1611
Eco47I	GGWCC	7 cut(s)	219, 626, 1118, 1169, 1263, 1871, 2222
Eco52I	CGGCCG	1 cut(s)	544
Eco53kI	GAGCTC	2 cut(s)	122, 2152
Eco57I	CTGAAG	2 cut(s)	407, 2198
Eco88I	CYCGRG	1 cut(s)	687
EcoICRI	GAGCTC	2 cut(s)	122, 2152
EcoNI	CCTNNNNNAGG	1 cut(s)	2067
EcoO109I	RGGNCCY	3 cut(s)	903, 1169, 2512
EcoRI	GAATTC	2 cut(s)	1744, 1862
EcoRII	CCWGG	5 cut(s)	622, 1020, 1363, 2168, 2623
EcoRV	GATATC	2 cut(s)	304, 1611
EcoT14I	CCWWGG	4 cut(s)	39, 214, 1957, 2182
EcoT38I	GRGCYC	3 cut(s)	124, 1198, 2154
ErhI	CCWWGG	4 cut(s)	39, 214, 1957, 2182
Esp3I	CGTCTC	1 cut(s)	580
FalI	AAGNNNNNCTT	6 cut(s)	659, 691, 846, 878, 890, 922
FaqI	GGGAC	4 cut(s)	21, 232, 960, 1155
FauNDI	CATATG	4 cut(s)	1213, 1540, 1699, 2525
FbaI	TGATCA	1 cut(s)	493
FblI	GTMKAC	1 cut(s)	531
FokI	GGATG	2 cut(s)	403, 1864
FriOI	GRGCYC	3 cut(s)	124, 1198, 2154
FspBI	CTAG	6 cut(s)	78, 1053, 2010, 2022, 2195, 2619
GsaI	CCCAGC	1 cut(s)	2338
HaeIII	GGCC	7 cut(s)	321, 546, 905, 1363, 1727, 1760, 2514
HapII	CCGG	3 cut(s)	629, 1453, 2650
HgaI	GACGC	2 cut(s)	597, 1103
HincII	GTYRAC	2 cut(s)	112, 2374
HindII	GTYRAC	2 cut(s)	112, 2374
HindIII	AAGCTT	2 cut(s)	279, 2503
HpaII	CCGG	3 cut(s)	629, 1453, 2650
HphI	GGTGA	7 cut(s)	193, 776, 1079, 1658, 2108, 2423, 2819
Hpy166II	GTNNAC	7 cut(s)	112, 193, 532, 1528, 1874, 2322, 2374
Hpy188III	TCNNGA	8 cut(s)	96, 130, 687, 1295, 1420, 1710, 2315, 2323
Hpy8I	GTNNAC	7 cut(s)	112, 193, 532, 1528, 1874, 2322, 2374
Hpy99I	CGWCG	2 cut(s)	311, 1251
HpyAV	CCTTC	6 cut(s)	431, 840, 916, 1094, 1771, 1775
HpyCH4III	ACNGT	7 cut(s)	747, 1288, 1344, 1948, 2044, 2093, 2292
HpyCH4IV	ACGT	2 cut(s)	2260, 2587
HpyF10VI	GCNNNNNNNGC	6 cut(s)	164, 552, 1007, 1208, 2511, 2650
HpyF3I	CTNAG	8 cut(s)	582, 915, 1296, 1878, 2130, 2205, 2498, 2604
HpySE526I	ACGT	2 cut(s)	2260, 2587
Ksp22I	TGATCA	1 cut(s)	493
Kzo9I	GATC	5 cut(s)	493, 655, 2413, 2424, 2723
LguI	GCTCTTC	1 cut(s)	1209
LmnI	GCTCC	3 cut(s)	119, 1843, 2149
Lsp1109I	GCAGC	8 cut(s)	407, 644, 1507, 1624, 1690, 1789, 2062, 2230
LweI	GCATC	4 cut(s)	997, 1624, 1715, 2433
MaeI	CTAG	6 cut(s)	78, 1053, 2010, 2022, 2195, 2619
MaeII	ACGT	2 cut(s)	2260, 2587
MaeIII	GTNAC	8 cut(s)	644, 1148, 1256, 1448, 1646, 1660, 1795, 2807
MalI	GATC	5 cut(s)	495, 657, 2415, 2426, 2725
MboI	GATC	5 cut(s)	493, 655, 2413, 2424, 2723
MboII	GAAGA	9 cut(s)	84, 321, 692, 818, 1144, 1196, 1687, 2049, 2785
MfeI	CAATTG	1 cut(s)	250
MflI	RGATCY	2 cut(s)	655, 2424
MhlI	GDGCHC	5 cut(s)	124, 1198, 1955, 2154, 2471
MlsI	TGGCCA	1 cut(s)	1363
MluNI	TGGCCA	1 cut(s)	1363
MlyI	GAGTC	4 cut(s)	131, 1294, 2640, 2758
MmeI	TCCRAC	4 cut(s)	1213, 1290, 2741, 2757
Mox20I	TGGCCA	1 cut(s)	1363
MscI	TGGCCA	1 cut(s)	1363
MseI	TTAA	8 cut(s)	12, 666, 753, 1224, 1376, 1734, 2615, 2827
MslI	CAYNNNNRTG	4 cut(s)	708, 957, 972, 1786
Msp20I	TGGCCA	1 cut(s)	1363
MspA1I	CMGCKG	1 cut(s)	104
MspI	CCGG	3 cut(s)	629, 1453, 2650
MspR9I	CCNGG	6 cut(s)	624, 1022, 1365, 1454, 2170, 2625
MunI	CAATTG	1 cut(s)	250
Mva1269I	GAATGC	2 cut(s)	207, 715
MvaI	CCWGG	5 cut(s)	624, 1022, 1365, 2170, 2625
MwoI	GCNNNNNNNGC	6 cut(s)	164, 552, 1007, 1208, 2511, 2650
NciI	CCSGG	1 cut(s)	1454
NcoI	CCATGG	1 cut(s)	214
NdeI	CATATG	4 cut(s)	1213, 1540, 1699, 2525
NdeII	GATC	5 cut(s)	493, 655, 2413, 2424, 2723
NlaIV	GGNNCC	7 cut(s)	220, 1171, 1728, 1872, 2122, 2426, 2513
NmeAIII	GCCGAG	1 cut(s)	2133
NmuCI	GTSAC	4 cut(s)	644, 1646, 1795, 2807
NspI	RCATGY	1 cut(s)	1789
OliI	CACNNNNGTG	1 cut(s)	1786
PaeR7I	CTCGAG	1 cut(s)	687
PciI	ACATGT	1 cut(s)	1785
PciSI	GCTCTTC	1 cut(s)	1209
PctI	GAATGC	2 cut(s)	207, 715
PfeI	GAWTC	9 cut(s)	683, 716, 812, 887, 977, 1049, 1184, 2357, 2480
PflMI	CCANNNNNTGG	1 cut(s)	1409
PleI	GAGTC	4 cut(s)	131, 1294, 2640, 2758
PpsI	GAGTC	4 cut(s)	131, 1294, 2640, 2758
PpuMI	RGGWCCY	1 cut(s)	1169
PscI	ACATGT	1 cut(s)	1785
PshBI	ATTAAT	1 cut(s)	1224
PsiI	TTATAA	1 cut(s)	1892
Psp124BI	GAGCTC	2 cut(s)	124, 2154
Psp5II	RGGWCCY	1 cut(s)	1169
Psp6I	CCWGG	5 cut(s)	622, 1020, 1363, 2168, 2623
PspFI	CCCAGC	1 cut(s)	2334
PspGI	CCWGG	5 cut(s)	622, 1020, 1363, 2168, 2623
PspN4I	GGNNCC	7 cut(s)	220, 1171, 1728, 1872, 2122, 2426, 2513
PspPPI	RGGWCCY	1 cut(s)	1169
PsrI	GAACNNNNNNTAC	4 cut(s)	360, 392, 1455, 1487
PstI	CTGCAG	1 cut(s)	478
PsuI	RGATCY	2 cut(s)	655, 2424
PvuII	CAGCTG	1 cut(s)	104
RsaI	GTAC	3 cut(s)	378, 1290, 2046
RsaNI	GTAC	3 cut(s)	377, 1289, 2045
RseI	CAYNNNNRTG	4 cut(s)	708, 957, 972, 1786
SacI	GAGCTC	2 cut(s)	124, 2154
SapI	GCTCTTC	1 cut(s)	1209
SaqAI	TTAA	8 cut(s)	12, 666, 753, 1224, 1376, 1734, 2615, 2827
Sau3AI	GATC	5 cut(s)	493, 655, 2413, 2424, 2723
SchI	GAGTC	4 cut(s)	131, 1294, 2640, 2758
ScrFI	CCNGG	6 cut(s)	624, 1022, 1365, 1454, 2170, 2625
SduI	GDGCHC	5 cut(s)	124, 1198, 1955, 2154, 2471
SfaNI	GCATC	4 cut(s)	997, 1624, 1715, 2433
SfcI	CTRYAG	4 cut(s)	333, 474, 786, 1065
Sfr274I	CTCGAG	1 cut(s)	687
SinI	GGWCC	7 cut(s)	219, 626, 1118, 1169, 1263, 1871, 2222
SlaI	CTCGAG	1 cut(s)	687
SmiMI	CAYNNNNRTG	4 cut(s)	708, 957, 972, 1786
SmlI	CTYRAG	2 cut(s)	687, 1420
SmoI	CTYRAG	2 cut(s)	687, 1420
SpeI	ACTAGT	1 cut(s)	2618
SsiI	CCGC	4 cut(s)	179, 871, 2246, 2331
SspMI	CTAG	6 cut(s)	78, 1053, 2010, 2022, 2195, 2619
SstI	GAGCTC	2 cut(s)	124, 2154
StyD4I	CCNGG	6 cut(s)	622, 1020, 1363, 1452, 2168, 2623
StyI	CCWWGG	4 cut(s)	39, 214, 1957, 2182
TaaI	ACNGT	7 cut(s)	747, 1288, 1344, 1948, 2044, 2093, 2292
TaiI	ACGT	2 cut(s)	2263, 2590
TaqI	TCGA	5 cut(s)	688, 1246, 1669, 1768, 1963
TatI	WGTACW	1 cut(s)	2044
TauI	GCSGC	2 cut(s)	874, 2334
TfiI	GAWTC	9 cut(s)	683, 716, 812, 887, 977, 1049, 1184, 2357, 2480
Tru1I	TTAA	8 cut(s)	12, 666, 753, 1224, 1376, 1734, 2615, 2827
Tru9I	TTAA	8 cut(s)	12, 666, 753, 1224, 1376, 1734, 2615, 2827
TscAI	CASTG	8 cut(s)	262, 1336, 1804, 1951, 2023, 2098, 2297, 2476
TseFI	GTSAC	4 cut(s)	644, 1646, 1795, 2807
TseI	GCWGC	8 cut(s)	395, 632, 1520, 1637, 1703, 1802, 2050, 2243
Tsp45I	GTSAC	4 cut(s)	644, 1646, 1795, 2807
TspGWI	ACGGA	1 cut(s)	2437
TspRI	CASTG	8 cut(s)	262, 1336, 1804, 1951, 2023, 2098, 2297, 2476
Van91I	CCANNNNNTGG	1 cut(s)	1409
VpaK11BI	GGWCC	7 cut(s)	219, 626, 1118, 1169, 1263, 1871, 2222
VspI	ATTAAT	1 cut(s)	1224
XagI	CCTNNNNNAGG	1 cut(s)	2067
XapI	RAATTY	4 cut(s)	597, 1457, 1744, 1862
XceI	RCATGY	1 cut(s)	1789
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2693
XhoI	CTCGAG	1 cut(s)	687
XmiI	GTMKAC	1 cut(s)	531
XspI	CTAG	6 cut(s)	78, 1053, 2010, 2022, 2195, 2619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.