Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0006988

Physical Location & Seq

Genomic Coordinates Forward (+)

32379497 .. 32385601

Gene Structure 6105 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG295700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGTGCATTGCAGCTTTGCAATTCATGGAGACTGATATCGTTGCCATTATAGGCCCACAATCTTCTGTGGTTGCCCATATTGTATCCCACATTGCAAATGAACTCCAAGTACCGCTATTGTCATTTGCAGCCACAGACCCAACTCTCTCAGCCCTTCAGTTCCCATATTTTATTAGGACAACACAAAGTGATTTGTATCAAATGACTGCAGTTGCTCAAATTGTTGATCATTATGGTTGGAGAGAGGTTATTGCCATTTTTGTAGATGATGATTATGGGCGTAATGGCATATCAGCTTTAGATGATAAACTTGCTGAGAGGCGCTGTAAAATTTCCTACAAGTTGGCAATTCCCCCAGGACCGGCAGCTAATCGGAGTGCCATCATGGATCTGCTTATTAAGGTTGCCTTATTGGAATCTCGCGTTATAGTTCTTCATGTGAATCCTGATTCTGGTTTCATGGTTCTTGCTGTGGCACAGTATCTTAAAATGATGGGTGATGGTTTTGTATGGATAGCTACAGATTGGCTTTCATCTGTTTTAGATTCTGCTTTTCCTCTTCCTTCTGAAATCATGGATACACTGCAAGGAGTTCTTGTTTTGCGGCTACATACACCAGATTCAGATAGAAAGAGGGCCTTCTTTTCTAAGTGGAACAAGCTAACCGGTGGTTCTTTGGGACTGCATACTTATGGGCTTCATGCTTATGATTCTGTTTGGCTGTTAGCTCATGCTATTGATGCGTTTTTCAACCAGGGTGGGGTTATTTCATTCTCTAATGATTCTAGGATAAAAGCTGTAGAACAAGGTGATAGTCTTCACCTTGATGCAATGAGCATTTTTGATGATGGACCACTCCTGTTGAAGAACATATTGCAAAGTAACCTTGTTGGTTTGACAGGTCCCATTAAGTTTGACTCAGAAAGGGCTCTTGCTCTTCCAGCATATGATGTTATTAATGTGGTTGGAACTGGGTTTCGACGAATTGGTTACTGGTCCAACTATTCTGGGTTATCAACTGTACCTCCTGAGACTCTCTATTCAAAGCCACCTAATCGTTCAAGTGCAAATCAACAGTTATATAGTGTTATCTGGCCAGGGGAGTCATTATTGAAGCCCCGTGGTTGGGTTTTCCCAAACAATGGGATACAATTGAGAATTGGTGTACCTATTCGGGTCAGTTACCGGGAGTTTGTAACGCCAATTCAGGGAACTGATACTTTCAAGGGTTTCTGCATAGATGTATTCAATGCCGCTGTAAACTTGTTGCCATATGCTGTTCCATACAAGTTTATCCCTTTTGGAGATGGTCATAAAAACCCAAGCTACACAGAGCTTGTGACTTCTATTACAACGGGGGTATTTGATGCTGCAATTGGCGACATTGCCATTGTTACAAATCGAACGAAGATGGTGGATTTTACACAGCCATATGCTGCATCTGGACTTGTTGTAGTGGCCCCCTTTAAAAAATTGAACTCTGGTGCTTGGACCTTCCTTCGACCATTTACTGCACACATGTGGATAGTCACTGCTGCTTCTTTTTTTGTTATTGGTATAGTTGTATGGATTTTGGAGCATAGAATAAATGATGAATTCAGGGGTCCACCAAAGAAGCAATTTATAACCATCTTGTGGTTTAGCCTCTCAACTCTATTCTTTGCCCATAGAGAGAACACTGTGAGCACCCTTGGTCGAGTAGTGCTACTTATATGGCTGTTTGTGGTTTTGATAATCAACTCTAGTTACACTGCTAGCCTGACATCAATCCTCACAGTGCAGCAGCTATCTTCTCCTATCAAAGGAATTGAAAGCTTGAAAAACAGTGGCGAGCCAATCGGGTATCAAGTGGGTTCTTTTGCTGAGCATTATTTGAGTGAGGAGCTCGGCATATCCAAGTCCAGGCTCATTCCCCTTGCCTCTCCTCTAGCCTATGCTCAGGCACTTCAGCTTGGTCCTAAAAAGGGAGGTGTTGCTGCCGTGGTTGATGAACGCCCATATGTTGAACTATTCCTCTCAGCACAGTGCAAATTTCGGATTGTAGGTCAAGAGTTCACCAAAGGCGGCTGGGGTTTTGCATTTCCACGAGACTCTCCTTTAGCTGTTGACATATCAACTGCGATTCTACAATTATCGGAGAATGGTGATCTGCAACGGATCCATGATAAGTGGTTGGTGCAAACCACTTGCAGTTTTGAGAGCACTGAAATTGAATCAGACCAGCTTCAACTCAGAAGCTTTTGGGGCCTCTTTCTCATATGTGGAATTGCTTGCTTCATTGCTCTCCTTGTATATTTTTTGCAAATTGCGAACAAGTTACGCCGTGCTGACCCCCCGCAGAGTGTTTCAACTAGTCCTGGTGTCTCACAATCTGGGCGAGTCCGGCGATTTTTATCATTAATTGACAAGAAGGCTGAACAGTCCAGTAGTGGAAGTACAAAAAGGAAAGTTATTAGATCACTATCCGACAATGATAAGGATGGCAAGTTGGGTTGGCCTCCCAAGAAGAAACAAGCAGAAATGACTGATATGGGTGACATCAAGTCTAGCAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009606 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009628 GO:0009629 GO:0009630 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

851

Amino Acids

93.99

Weight (kDa)

8.24

Isoelectric Point (pI)

41.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	4 - 323	2.1e-82	Receptor family ligand binding region
Peripla_BP_6	PF13458	5 - 249	3.1e-11	Periplasmic binding protein
Lig_chan-Glu_bd	PF10613	401 - 487	3.4e-09	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	403 - 725	7.1e-11	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	505 - 758	2.5e-39	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42540 AT1G42540 AT1G42540 AT1G42540
fragaria_vesca	FvH4_5g25730 FvH4_5g25730 FvH4_5g25730 FvH4_5g25730 FvH4_5g25730 FvH4_5g25730
malus_domestica	MD06G1006800.v1.1
prunus_persica	Prupe.5G008300_v2.0.a1 Prupe.5G008300_v2.0.a1 Prupe.5G008300_v2.0.a1 Prupe.5G008300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0216081
rosa_laevigata	RLG00000002596
rosa_multiflora	Rmu_sc0009767.1_g000004
rosa_roxburghii	Rroxscaffold_3G00243670
rosa_rugosa	Rorug07G0158700
rosa_samantha	Rh7AG295700 Rh7BG288100 Rh7CG316100 Rh7DG298600
rosa_wichuraiana	Rw7G025150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1625
AccB7I	CCANNNNNTGG	2 cut(s)	1142, 1635
AccII	CGCG	1 cut(s)	423
AciI	CCGC	5 cut(s)	113, 604, 1254, 2064, 2336
AclWI	GGATC	3 cut(s)	396, 2152, 2165
AcoI	YGGCCR	1 cut(s)	1094
AcsI	RAATTY	3 cut(s)	330, 1595, 2030
AcuI	CTGAAG	2 cut(s)	140, 1931
AdeI	CACNNNGTG	1 cut(s)	188
AfaI	GTAC	4 cut(s)	111, 1023, 1167, 2437
AflIII	ACRYGT	1 cut(s)	1518
AgeI	ACCGGT	1 cut(s)	665
AhdI	GACNNNNNGTC	1 cut(s)	2542
AhlI	ACTAGT	1 cut(s)	2351
AjnI	CCWGG	5 cut(s)	355, 753, 1096, 1901, 2356
AleI	CACNNNNGTG	1 cut(s)	1519
Alw21I	GWGCWC	3 cut(s)	1688, 1887, 2204
Alw26I	GTCTC	4 cut(s)	23, 1025, 2082, 2368
AlwI	GGATC	3 cut(s)	396, 2152, 2165
AoxI	GGCC	6 cut(s)	52, 636, 1094, 1458, 2245, 2495
ApeKI	GCWGC	9 cut(s)	11, 128, 365, 1370, 1436, 1535, 1780, 1783, 1976
ApoI	RAATTY	3 cut(s)	330, 1595, 2030
AseI	ATTAAT	2 cut(s)	957, 2399
AsiGI	ACCGGT	1 cut(s)	665
AspLEI	GCGC	1 cut(s)	324
AsuC2I	CCSGG	1 cut(s)	1187
AsuHPI	GGTGA	6 cut(s)	509, 812, 821, 2047, 2156, 2546
AsuNHI	GCTAGC	1 cut(s)	1754
AvaII	GGWCC	7 cut(s)	359, 851, 902, 996, 1491, 1604, 1955
BalI	TGGCCA	1 cut(s)	1096
BamHI	GGATCC	1 cut(s)	2157
BanII	GRGCYC	2 cut(s)	931, 1887
BauI	CACGAG	1 cut(s)	2085
BbsI	GAAGAC	1 cut(s)	809
Bbv12I	GWGCWC	3 cut(s)	1688, 1887, 2204
BbvI	GCAGC	9 cut(s)	23, 140, 377, 1357, 1423, 1522, 1792, 1795, 1963
BccI	CCATC	8 cut(s)	389, 487, 494, 842, 1301, 1405, 1637, 2474
BceAI	ACGGC	2 cut(s)	1964, 2307
BciT130I	CCWGG	5 cut(s)	357, 755, 1098, 1903, 2358
BciVI	GTATCC	3 cut(s)	94, 571, 1140
BclI	TGATCA	1 cut(s)	226
BcnI	CCSGG	1 cut(s)	1187
BcoDI	GTCTC	4 cut(s)	23, 1025, 2082, 2368
BcuI	ACTAGT	1 cut(s)	2351
BfaI	CTAG	6 cut(s)	786, 1743, 1755, 1928, 2352, 2547
BfmI	CTRYAG	3 cut(s)	207, 519, 798
BfoI	RGCGCY	1 cut(s)	325
BfuI	GTATCC	3 cut(s)	94, 571, 1140
BlpI	GCTNAGC	1 cut(s)	1863
Bme1390I	CCNGG	6 cut(s)	357, 755, 1098, 1187, 1903, 2358
Bme18I	GGWCC	7 cut(s)	359, 851, 902, 996, 1491, 1604, 1955
BmeRI	GACNNNNNGTC	1 cut(s)	2542
BmiI	GGNNCC	5 cut(s)	904, 1461, 1605, 2159, 2246
BmrFI	CCNGG	6 cut(s)	357, 755, 1098, 1187, 1903, 2358
BmrI	ACTGGG	1 cut(s)	981
BmsI	GCATC	4 cut(s)	730, 817, 1357, 1448
BmtI	GCTAGC	1 cut(s)	1758
BmuI	ACTGGG	1 cut(s)	981
BpiI	GAAGAC	1 cut(s)	809
Bpu10I	CCTNAGC	1 cut(s)	1938
Bpu1102I	GCTNAGC	1 cut(s)	1863
BpuMI	CCSGG	1 cut(s)	1187
BsaBI	GATNNNNATC	3 cut(s)	195, 2392, 2461
BsaJI	CCNNGG	6 cut(s)	355, 754, 1097, 1120, 1690, 1980
BsaWI	WCCGGW	1 cut(s)	665
BsaXI	ACNNNNNCTCC	4 cut(s)	582, 612, 1009, 1039
Bse118I	RCCGGY	2 cut(s)	361, 665
Bse1I	ACTGG	3 cut(s)	976, 998, 2424
Bse3DI	GCAATG	5 cut(s)	6, 90, 837, 1383, 2277
Bse8I	GATNNNNATC	3 cut(s)	195, 2392, 2461
BseBI	CCWGG	5 cut(s)	357, 755, 1098, 1903, 2358
BseDI	CCNNGG	6 cut(s)	355, 754, 1097, 1120, 1690, 1980
BseGI	GGATG	1 cut(s)	2485
BseJI	GATNNNNATC	3 cut(s)	195, 2392, 2461
BseMI	GCAATG	5 cut(s)	6, 90, 837, 1383, 2277
BseMII	CTCAG	8 cut(s)	162, 306, 933, 1020, 1854, 1952, 2031, 2245
BseNI	ACTGG	3 cut(s)	976, 998, 2424
BseRI	GAGGAG	2 cut(s)	1895, 1914
BseXI	GCAGC	9 cut(s)	23, 140, 377, 1357, 1423, 1522, 1792, 1795, 1963
BseYI	CCCAGC	1 cut(s)	2067
BsgI	GTGCAG	2 cut(s)	1497, 1799
Bsh1236I	CGCG	1 cut(s)	423
BshFI	GGCC	6 cut(s)	54, 638, 1096, 1460, 2247, 2497
BshTI	ACCGGT	1 cut(s)	665
BsiHKAI	GWGCWC	3 cut(s)	1688, 1887, 2204
BsiSI	CCGG	4 cut(s)	362, 666, 1186, 2383
BslFI	GGGAC	2 cut(s)	693, 888
BsmAI	GTCTC	4 cut(s)	23, 1025, 2082, 2368
BsmFI	GGGAC	2 cut(s)	693, 888
BsnI	GGCC	6 cut(s)	54, 638, 1096, 1460, 2247, 2497
Bsp1286I	GDGCHC	4 cut(s)	931, 1688, 1887, 2204
Bsp143I	GATC	5 cut(s)	226, 388, 2146, 2157, 2456
Bsp1720I	GCTNAGC	1 cut(s)	1863
BspACI	CCGC	5 cut(s)	113, 604, 1254, 2064, 2336
BspANI	GGCC	6 cut(s)	54, 638, 1096, 1460, 2247, 2497
BspCNI	CTCAG	8 cut(s)	161, 307, 932, 1021, 1855, 1951, 2030, 2244
BspFNI	CGCG	1 cut(s)	423
BspLI	GGNNCC	5 cut(s)	904, 1461, 1605, 2159, 2246
BspMAI	CTGCAG	1 cut(s)	211
BspOI	GCTAGC	1 cut(s)	1758
BspPI	GGATC	3 cut(s)	396, 2152, 2165
BspQI	GCTCTTC	1 cut(s)	942
BsrDI	GCAATG	5 cut(s)	6, 90, 837, 1383, 2277
BsrFI	RCCGGY	2 cut(s)	361, 665
BsrI	ACTGG	3 cut(s)	976, 998, 2424
BssAI	RCCGGY	2 cut(s)	361, 665
BssECI	CCNNGG	6 cut(s)	355, 754, 1097, 1120, 1690, 1980
BssMI	GATC	5 cut(s)	226, 388, 2146, 2157, 2456
BssSI	CACGAG	1 cut(s)	2085
BssT1I	CCWWGG	1 cut(s)	1690
Bst2BI	CACGAG	1 cut(s)	2085
Bst2UI	CCWGG	5 cut(s)	357, 755, 1098, 1903, 2358
Bst4CI	ACNGT	8 cut(s)	480, 1021, 1077, 1681, 1777, 1826, 2025, 2421
Bst6I	CTCTTC	2 cut(s)	564, 942
BstC8I	GCNNGC	3 cut(s)	1756, 1832, 2272
BstDEI	CTNAG	9 cut(s)	148, 315, 648, 919, 1029, 1863, 1938, 2017, 2231
BstDSI	CCRYGG	2 cut(s)	1120, 1980
BstENI	CCTNNNNNAGG	1 cut(s)	1800
BstF5I	GGATG	1 cut(s)	2485
BstFNI	CGCG	1 cut(s)	423
BstH2I	RGCGCY	1 cut(s)	325
BstHHI	GCGC	1 cut(s)	324
BstKTI	GATC	5 cut(s)	229, 391, 2149, 2160, 2459
BstMAI	GTCTC	4 cut(s)	23, 1025, 2082, 2368
BstMBI	GATC	5 cut(s)	226, 388, 2146, 2157, 2456
BstMWI	GCNNNNNNNGC	4 cut(s)	740, 941, 2244, 2383
BstNI	CCWGG	5 cut(s)	357, 755, 1098, 1903, 2358
BstNSI	RCATGY	1 cut(s)	1522
BstSCI	CCNGG	6 cut(s)	355, 753, 1096, 1185, 1901, 2356
BstSFI	CTRYAG	3 cut(s)	207, 519, 798
BstUI	CGCG	1 cut(s)	423
BstV1I	GCAGC	9 cut(s)	23, 140, 377, 1357, 1423, 1522, 1792, 1795, 1963
BstV2I	GAAGAC	1 cut(s)	809
BstX2I	RGATCY	2 cut(s)	388, 2157
BstYI	RGATCY	2 cut(s)	388, 2157
BsuI	GTATCC	3 cut(s)	94, 571, 1140
BsuRI	GGCC	6 cut(s)	54, 638, 1096, 1460, 2247, 2497
BtgI	CCRYGG	2 cut(s)	1120, 1980
BtsCI	GGATG	1 cut(s)	2485
BtsI	GCAGTG	3 cut(s)	581, 1530, 1749
BtsIMutI	CAGTG	8 cut(s)	581, 1530, 1677, 1749, 1782, 1831, 2030, 2202
Cac8I	GCNNGC	3 cut(s)	1756, 1832, 2272
CfoI	GCGC	1 cut(s)	324
Cfr10I	RCCGGY	2 cut(s)	361, 665
Csp6I	GTAC	4 cut(s)	110, 1022, 1166, 2436
CspAI	ACCGGT	1 cut(s)	665
CspCI	CAANNNNNGTGG	4 cut(s)	739, 774, 843, 878
CviAII	CATG	9 cut(s)	25, 385, 437, 460, 574, 701, 731, 1519, 2162
CviQI	GTAC	4 cut(s)	110, 1022, 1166, 2436
DdeI	CTNAG	9 cut(s)	148, 315, 648, 919, 1029, 1863, 1938, 2017, 2231
DpnI	GATC	5 cut(s)	228, 390, 2148, 2159, 2458
DpnII	GATC	5 cut(s)	226, 388, 2146, 2157, 2456
DraI	TTTAAA	1 cut(s)	1468
DraIII	CACNNNGTG	1 cut(s)	188
DriI	GACNNNNNGTC	1 cut(s)	2542
EaeI	YGGCCR	1 cut(s)	1094
Eam1104I	CTCTTC	2 cut(s)	564, 942
Eam1105I	GACNNNNNGTC	1 cut(s)	2542
EarI	CTCTTC	2 cut(s)	564, 942
Ecl136II	GAGCTC	1 cut(s)	1885
Eco130I	CCWWGG	1 cut(s)	1690
Eco24I	GRGCYC	2 cut(s)	931, 1887
Eco32I	GATATC	1 cut(s)	37
Eco47I	GGWCC	7 cut(s)	359, 851, 902, 996, 1491, 1604, 1955
Eco53kI	GAGCTC	1 cut(s)	1885
Eco57I	CTGAAG	2 cut(s)	140, 1931
EcoICRI	GAGCTC	1 cut(s)	1885
EcoNI	CCTNNNNNAGG	1 cut(s)	1800
EcoO109I	RGGNCCY	3 cut(s)	636, 902, 2245
EcoRI	GAATTC	1 cut(s)	1595
EcoRII	CCWGG	5 cut(s)	355, 753, 1096, 1901, 2356
EcoRV	GATATC	1 cut(s)	37
EcoT14I	CCWWGG	1 cut(s)	1690
EcoT38I	GRGCYC	2 cut(s)	931, 1887
ErhI	CCWWGG	1 cut(s)	1690
FaeI	CATG	9 cut(s)	28, 388, 440, 463, 577, 704, 734, 1522, 2165
FalI	AAGNNNNNCTT	6 cut(s)	392, 424, 579, 611, 623, 655
FaqI	GGGAC	2 cut(s)	693, 888
FatI	CATG	9 cut(s)	24, 384, 436, 459, 573, 700, 730, 1518, 2161
FauI	CCCGC	1 cut(s)	2343
FauNDI	CATATG	5 cut(s)	946, 1273, 1432, 1999, 2258
FbaI	TGATCA	1 cut(s)	226
FokI	GGATG	1 cut(s)	2492
FriOI	GRGCYC	2 cut(s)	931, 1887
FspBI	CTAG	6 cut(s)	786, 1743, 1755, 1928, 2352, 2547
GlaI	GCGC	1 cut(s)	323
GsaI	CCCAGC	1 cut(s)	2071
HaeII	RGCGCY	1 cut(s)	325
HaeIII	GGCC	6 cut(s)	54, 638, 1096, 1460, 2247, 2497
HapII	CCGG	4 cut(s)	362, 666, 1186, 2383
HhaI	GCGC	1 cut(s)	324
Hin1II	CATG	9 cut(s)	28, 388, 440, 463, 577, 704, 734, 1522, 2165
Hin6I	GCGC	1 cut(s)	322
HinP1I	GCGC	1 cut(s)	322
HincII	GTYRAC	1 cut(s)	2107
HindII	GTYRAC	1 cut(s)	2107
HindIII	AAGCTT	2 cut(s)	1813, 2236
HpaII	CCGG	4 cut(s)	362, 666, 1186, 2383
HphI	GGTGA	6 cut(s)	509, 812, 821, 2047, 2156, 2546
Hpy166II	GTNNAC	5 cut(s)	1166, 1261, 1607, 2055, 2107
Hpy188I	TCNGA	9 cut(s)	375, 568, 625, 922, 2037, 2137, 2218, 2234, 2467
Hpy188III	TCNNGA	4 cut(s)	446, 1028, 1443, 2048
Hpy8I	GTNNAC	5 cut(s)	1166, 1261, 1607, 2055, 2107
Hpy99I	CGWCG	1 cut(s)	984
HpyAV	CCTTC	6 cut(s)	164, 573, 649, 1504, 1508, 2404
HpyCH4III	ACNGT	8 cut(s)	480, 1021, 1077, 1681, 1777, 1826, 2025, 2421
HpyF10VI	GCNNNNNNNGC	4 cut(s)	740, 941, 2244, 2383
HpyF3I	CTNAG	9 cut(s)	148, 315, 648, 919, 1029, 1863, 1938, 2017, 2231
Hsp92II	CATG	9 cut(s)	28, 388, 440, 463, 577, 704, 734, 1522, 2165
HspAI	GCGC	1 cut(s)	322
Ksp22I	TGATCA	1 cut(s)	226
Kzo9I	GATC	5 cut(s)	226, 388, 2146, 2157, 2456
LguI	GCTCTTC	1 cut(s)	942
LmnI	GCTCC	2 cut(s)	1576, 1882
Lsp1109I	GCAGC	9 cut(s)	23, 140, 377, 1357, 1423, 1522, 1792, 1795, 1963
LweI	GCATC	4 cut(s)	730, 817, 1357, 1448
MaeI	CTAG	6 cut(s)	786, 1743, 1755, 1928, 2352, 2547
MalI	GATC	5 cut(s)	228, 390, 2148, 2159, 2458
MboI	GATC	5 cut(s)	226, 388, 2146, 2157, 2456
MboII	GAAGA	9 cut(s)	54, 425, 551, 809, 877, 929, 1420, 1782, 2518
MfeI	CAATTG	2 cut(s)	1151, 1374
MflI	RGATCY	2 cut(s)	388, 2157
MhlI	GDGCHC	4 cut(s)	931, 1688, 1887, 2204
MlsI	TGGCCA	1 cut(s)	1096
MluNI	TGGCCA	1 cut(s)	1096
MlyI	GAGTC	5 cut(s)	911, 1027, 1112, 2084, 2388
MmeI	TCCRAC	4 cut(s)	218, 946, 1023, 2490
Mox20I	TGGCCA	1 cut(s)	1096
MscI	TGGCCA	1 cut(s)	1096
MseI	TTAA	7 cut(s)	399, 486, 909, 957, 1467, 2399, 2554
MslI	CAYNNNNRTG	4 cut(s)	690, 705, 825, 1519
Msp20I	TGGCCA	1 cut(s)	1096
MspA1I	CMGCKG	1 cut(s)	1256
MspI	CCGG	4 cut(s)	362, 666, 1186, 2383
MspR9I	CCNGG	6 cut(s)	357, 755, 1098, 1187, 1903, 2358
MunI	CAATTG	2 cut(s)	1151, 1374
MvaI	CCWGG	5 cut(s)	357, 755, 1098, 1903, 2358
MvnI	CGCG	1 cut(s)	423
MwoI	GCNNNNNNNGC	4 cut(s)	740, 941, 2244, 2383
NciI	CCSGG	1 cut(s)	1187
NdeI	CATATG	5 cut(s)	946, 1273, 1432, 1999, 2258
NdeII	GATC	5 cut(s)	226, 388, 2146, 2157, 2456
NheI	GCTAGC	1 cut(s)	1754
NlaIII	CATG	9 cut(s)	28, 388, 440, 463, 577, 704, 734, 1522, 2165
NlaIV	GGNNCC	5 cut(s)	904, 1461, 1605, 2159, 2246
NmeAIII	GCCGAG	1 cut(s)	1866
NmuCI	GTSAC	3 cut(s)	1339, 1528, 2534
NspI	RCATGY	1 cut(s)	1522
OliI	CACNNNNGTG	1 cut(s)	1519
PciI	ACATGT	1 cut(s)	1518
PciSI	GCTCTTC	1 cut(s)	942
PfeI	GAWTC	9 cut(s)	416, 442, 449, 545, 620, 710, 782, 2122, 2213
PflMI	CCANNNNNTGG	2 cut(s)	1142, 1635
PinAI	ACCGGT	1 cut(s)	665
PleI	GAGTC	5 cut(s)	911, 1027, 1111, 2084, 2387
PpsI	GAGTC	5 cut(s)	911, 1027, 1111, 2084, 2387
PpuMI	RGGWCCY	1 cut(s)	902
PscI	ACATGT	1 cut(s)	1518
PshBI	ATTAAT	2 cut(s)	957, 2399
PsiI	TTATAA	1 cut(s)	1625
Psp124BI	GAGCTC	1 cut(s)	1887
Psp5II	RGGWCCY	1 cut(s)	902
Psp6I	CCWGG	5 cut(s)	355, 753, 1096, 1901, 2356
PspFI	CCCAGC	1 cut(s)	2067
PspGI	CCWGG	5 cut(s)	355, 753, 1096, 1901, 2356
PspN4I	GGNNCC	5 cut(s)	904, 1461, 1605, 2159, 2246
PspPPI	RGGWCCY	1 cut(s)	902
PsrI	GAACNNNNNNTAC	2 cut(s)	93, 125
PstI	CTGCAG	1 cut(s)	211
PsuI	RGATCY	2 cut(s)	388, 2157
RsaI	GTAC	4 cut(s)	111, 1023, 1167, 2437
RsaNI	GTAC	4 cut(s)	110, 1022, 1166, 2436
RseI	CAYNNNNRTG	4 cut(s)	690, 705, 825, 1519
SacI	GAGCTC	1 cut(s)	1887
SapI	GCTCTTC	1 cut(s)	942
SaqAI	TTAA	7 cut(s)	399, 486, 909, 957, 1467, 2399, 2554
Sau3AI	GATC	5 cut(s)	226, 388, 2146, 2157, 2456
SchI	GAGTC	5 cut(s)	911, 1027, 1112, 2084, 2388
ScrFI	CCNGG	6 cut(s)	357, 755, 1098, 1187, 1903, 2358
SduI	GDGCHC	4 cut(s)	931, 1688, 1887, 2204
SfaNI	GCATC	4 cut(s)	730, 817, 1357, 1448
SfcI	CTRYAG	3 cut(s)	207, 519, 798
SinI	GGWCC	7 cut(s)	359, 851, 902, 996, 1491, 1604, 1955
SmiMI	CAYNNNNRTG	4 cut(s)	690, 705, 825, 1519
SpeI	ACTAGT	1 cut(s)	2351
SsiI	CCGC	5 cut(s)	113, 604, 1254, 2064, 2336
SspMI	CTAG	6 cut(s)	786, 1743, 1755, 1928, 2352, 2547
SstI	GAGCTC	1 cut(s)	1887
StyD4I	CCNGG	6 cut(s)	355, 753, 1096, 1185, 1901, 2356
StyI	CCWWGG	1 cut(s)	1690
TaaI	ACNGT	8 cut(s)	480, 1021, 1077, 1681, 1777, 1826, 2025, 2421
TaqI	TCGA	4 cut(s)	979, 1402, 1501, 1696
TatI	WGTACW	1 cut(s)	2435
TauI	GCSGC	3 cut(s)	607, 1256, 2067
TfiI	GAWTC	9 cut(s)	416, 442, 449, 545, 620, 710, 782, 2122, 2213
Tru1I	TTAA	7 cut(s)	399, 486, 909, 957, 1467, 2399, 2554
Tru9I	TTAA	7 cut(s)	399, 486, 909, 957, 1467, 2399, 2554
TscAI	CASTG	8 cut(s)	588, 1537, 1684, 1756, 1782, 1831, 2030, 2209
TseFI	GTSAC	3 cut(s)	1339, 1528, 2534
TseI	GCWGC	9 cut(s)	11, 128, 365, 1370, 1436, 1535, 1780, 1783, 1976
Tsp45I	GTSAC	3 cut(s)	1339, 1528, 2534
TspGWI	ACGGA	1 cut(s)	2170
TspRI	CASTG	8 cut(s)	588, 1537, 1684, 1756, 1782, 1831, 2030, 2209
Van91I	CCANNNNNTGG	2 cut(s)	1142, 1635
VpaK11BI	GGWCC	7 cut(s)	359, 851, 902, 996, 1491, 1604, 1955
VspI	ATTAAT	2 cut(s)	957, 2399
XagI	CCTNNNNNAGG	1 cut(s)	1800
XapI	RAATTY	3 cut(s)	330, 1595, 2030
XceI	RCATGY	1 cut(s)	1522
XspI	CTAG	6 cut(s)	786, 1743, 1755, 1928, 2352, 2547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.