AT1G49410

Mitochondrial import receptor subunit TOM6 homolog

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
18285306 .. 18287034
1729 bp
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UTR
Exon/CDS
Intron
AT1G49410.1

Sequence Viewer

Length: 165 bp
ATGTTCCCAGGAATGTTCATGCGAAAGCCAGACAAAGCCGAGGCTCTGAAGCAGCTACGCACTCATGTCGCTCTTTTTGGCAGCTGGGTTGTCATTATCCGTGCTGCTCCCTACGTCCTCTCCTATTTCTCCGATTCCAAAGATGAGCTCAAGATCGATTTCTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

54

Amino Acids

6.27

Weight (kDa)

9.22

Isoelectric Point (pI)

15.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017947)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49410
malus_domestica MD00G1073700.v1.1 MD10G1085000.v1.1 MD11G1171200.v1.1
prunus_persica Prupe.8G107900_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0262021
rosa_multiflora Rmu_sc0022110.1_g000001
rosa_roxburghii Rroxscaffold_7G00207750
rosa_rugosa Rorug05G0594900 Rorug05G0595000
rosa_wichuraiana Rw6G009810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 68
AjnI CCWGG 1 cut(s) 7
AluBI AGCT 3 cut(s) 55, 84, 148
AluI AGCT 3 cut(s) 55, 84, 148
Alw21I GWGCWC 1 cut(s) 150
ApeKI GCWGC 3 cut(s) 52, 81, 104
BanII GRGCYC 1 cut(s) 150
Bbv12I GWGCWC 1 cut(s) 150
BbvI GCAGC 3 cut(s) 64, 91, 93
BcgI CGANNNNNNTGC 2 cut(s) 49, 83
BciT130I CCWGG 1 cut(s) 9
BisI GCNGC 3 cut(s) 53, 82, 105
BlsI GCNGC 3 cut(s) 54, 83, 106
Bme1390I CCNGG 1 cut(s) 9
BmrFI CCNGG 1 cut(s) 9
BpuEI CTTGAG 1 cut(s) 134
Bsa29I ATCGAT 1 cut(s) 156
BsaJI CCNNGG 2 cut(s) 7, 39
BsaXI ACNNNNNCTCC 2 cut(s) 104, 134
BseBI CCWGG 1 cut(s) 9
BseCI ATCGAT 1 cut(s) 156
BseDI CCNNGG 2 cut(s) 7, 39
BseXI GCAGC 3 cut(s) 64, 91, 93
BseYI CCCAGC 1 cut(s) 84
BshVI ATCGAT 1 cut(s) 156
BsiHKAI GWGCWC 1 cut(s) 150
Bsp1286I GDGCHC 1 cut(s) 150
Bsp143I GATC 1 cut(s) 153
BspDI ATCGAT 1 cut(s) 156
BssECI CCNNGG 2 cut(s) 7, 39
BssMI GATC 1 cut(s) 153
Bst2UI CCWGG 1 cut(s) 9
BstKTI GATC 1 cut(s) 156
BstMBI GATC 1 cut(s) 153
BstNI CCWGG 1 cut(s) 9
BstSCI CCNGG 1 cut(s) 7
BstV1I GCAGC 3 cut(s) 64, 91, 93
Bsu15I ATCGAT 1 cut(s) 156
BsuTUI ATCGAT 1 cut(s) 156
ClaI ATCGAT 1 cut(s) 156
CviAII CATG 2 cut(s) 19, 65
CviJI RGCY 6 cut(s) 28, 38, 44, 55, 84, 148
CviKI_1 RGCY 6 cut(s) 28, 38, 44, 55, 84, 148
DpnI GATC 1 cut(s) 155
DpnII GATC 1 cut(s) 153
Ecl136II GAGCTC 1 cut(s) 148
Eco24I GRGCYC 1 cut(s) 150
Eco53kI GAGCTC 1 cut(s) 148
Eco57I CTGAAG 1 cut(s) 68
EcoICRI GAGCTC 1 cut(s) 148
EcoRII CCWGG 1 cut(s) 7
EcoT38I GRGCYC 1 cut(s) 150
FaeI CATG 2 cut(s) 22, 68
FaiI YATR 2 cut(s) 20, 66
FatI CATG 2 cut(s) 18, 64
Fnu4HI GCNGC 3 cut(s) 53, 82, 105
FriOI GRGCYC 1 cut(s) 150
Fsp4HI GCNGC 3 cut(s) 53, 82, 105
GluI GCNGC 3 cut(s) 53, 82, 105
GsaI CCCAGC 1 cut(s) 88
Hin1II CATG 2 cut(s) 22, 68
HinfI GANTC 1 cut(s) 134
Hpy188I TCNGA 2 cut(s) 48, 133
Hpy188III TCNNGA 1 cut(s) 151
HpyCH4IV ACGT 1 cut(s) 114
HpySE526I ACGT 1 cut(s) 114
Hsp92II CATG 2 cut(s) 22, 68
Kzo9I GATC 1 cut(s) 153
LmnI GCTCC 1 cut(s) 112
LpnPI CCDG 3 cut(s) 21, 42, 70
Lsp1109I GCAGC 3 cut(s) 64, 91, 93
MaeII ACGT 1 cut(s) 114
MalI GATC 1 cut(s) 155
MboI GATC 1 cut(s) 153
MhlI GDGCHC 1 cut(s) 150
MnlI CCTC 2 cut(s) 34, 128
MspA1I CMGCKG 1 cut(s) 84
MspR9I CCNGG 1 cut(s) 9
MvaI CCWGG 1 cut(s) 9
NdeII GATC 1 cut(s) 153
NlaIII CATG 2 cut(s) 22, 68
NmeAIII GCCGAG 1 cut(s) 64
PfeI GAWTC 1 cut(s) 134
PkrI GCNGC 3 cut(s) 54, 83, 106
Psp124BI GAGCTC 1 cut(s) 150
Psp6I CCWGG 1 cut(s) 7
PspFI CCCAGC 1 cut(s) 84
PspGI CCWGG 1 cut(s) 7
PvuII CAGCTG 1 cut(s) 84
SacI GAGCTC 1 cut(s) 150
SatI GCNGC 3 cut(s) 53, 82, 105
Sau3AI GATC 1 cut(s) 153
ScrFI CCNGG 1 cut(s) 9
SduI GDGCHC 1 cut(s) 150
SetI ASST 4 cut(s) 57, 86, 117, 150
SgeI CNNG 8 cut(s) 20, 21, 31, 41, 52, 77, 97, 113
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
SstI GAGCTC 1 cut(s) 150
StyD4I CCNGG 1 cut(s) 7
TaiI ACGT 1 cut(s) 117
TaqI TCGA 1 cut(s) 156
TfiI GAWTC 1 cut(s) 134
TseI GCWGC 3 cut(s) 52, 81, 104
TspDTI ATGAA 1 cut(s) 7
TspGWI ACGGA 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.