MD00G1073700.v1.1

Mitochondrial import receptor subunit TOM6 homolog

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
14874261 .. 14874422
162 bp
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UTR
Exon/CDS
Intron
MD00G1073700.v1.1.491

Sequence Viewer

Length: 162 bp
ATGTTTCCCATGTTTATGCAGAAGCCAGACAAGGCTGAGGCTCTGAAGCAGCTGCGGAGCCATGTCGCCATGTTTGGGGCTTGGGTCATTGCGATCCGAGCCGCCCTATATGTTCTTCACCTCCTCTCTGGGGAAAAAGACGAGCTCAAGCTTGAATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

54

Amino Acids

6.12

Weight (kDa)

8.14

Isoelectric Point (pI)

13.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017947)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49410
malus_domestica MD00G1073700.v1.1 MD10G1085000.v1.1 MD11G1171200.v1.1
prunus_persica Prupe.8G107900_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0262021
rosa_multiflora Rmu_sc0022110.1_g000001
rosa_roxburghii Rroxscaffold_7G00207750
rosa_rugosa Rorug05G0594900 Rorug05G0595000
rosa_wichuraiana Rw6G009810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 55, 102
AclWI GGATC 1 cut(s) 88
AcsI RAATTY 1 cut(s) 155
AcuI CTGAAG 1 cut(s) 65
AfiI CCNNNNNNNGG 2 cut(s) 75, 130
AgsI TTSAA 1 cut(s) 155
AluBI AGCT 3 cut(s) 52, 145, 151
AluI AGCT 3 cut(s) 52, 145, 151
Alw21I GWGCWC 1 cut(s) 147
AlwI GGATC 1 cut(s) 88
ApeKI GCWGC 2 cut(s) 49, 52
ApoI RAATTY 1 cut(s) 155
AsuHPI GGTGA 1 cut(s) 110
BanII GRGCYC 1 cut(s) 147
Bbv12I GWGCWC 1 cut(s) 147
BbvCI CCTCAGC 1 cut(s) 36
BbvI GCAGC 2 cut(s) 39, 61
BisI GCNGC 3 cut(s) 50, 53, 102
BlsI GCNGC 3 cut(s) 51, 54, 103
BmiI GGNNCC 1 cut(s) 59
Bpu10I CCTNAGC 1 cut(s) 36
BpuEI CTTGAG 1 cut(s) 131
Bsc4I CCNNNNNNNGG 2 cut(s) 75, 130
Bse3DI GCAATG 1 cut(s) 87
BseLI CCNNNNNNNGG 2 cut(s) 75, 130
BseMI GCAATG 1 cut(s) 87
BseMII CTCAG 1 cut(s) 27
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 2 cut(s) 39, 61
BsiHKAI GWGCWC 1 cut(s) 147
BslI CCNNNNNNNGG 2 cut(s) 75, 130
Bsp1286I GDGCHC 1 cut(s) 147
Bsp143I GATC 1 cut(s) 93
BspACI CCGC 2 cut(s) 55, 102
BspCNI CTCAG 1 cut(s) 28
BspLI GGNNCC 1 cut(s) 59
BspPI GGATC 1 cut(s) 88
BsrDI GCAATG 1 cut(s) 87
BssMI GATC 1 cut(s) 93
BstDEI CTNAG 1 cut(s) 36
BstKTI GATC 1 cut(s) 96
BstMBI GATC 1 cut(s) 93
BstMWI GCNNNNNNNGC 1 cut(s) 98
BstV1I GCAGC 2 cut(s) 39, 61
CviAII CATG 3 cut(s) 10, 62, 70
CviJI RGCY 9 cut(s) 25, 35, 41, 52, 60, 80, 101, 145, 151
CviKI_1 RGCY 9 cut(s) 25, 35, 41, 52, 60, 80, 101, 145, 151
DdeI CTNAG 1 cut(s) 36
DpnI GATC 1 cut(s) 95
DpnII GATC 1 cut(s) 93
Ecl136II GAGCTC 1 cut(s) 145
Eco24I GRGCYC 1 cut(s) 147
Eco53kI GAGCTC 1 cut(s) 145
Eco57I CTGAAG 1 cut(s) 65
EcoICRI GAGCTC 1 cut(s) 145
EcoT38I GRGCYC 1 cut(s) 147
FaeI CATG 3 cut(s) 13, 65, 73
FaiI YATR 6 cut(s) 11, 17, 63, 71, 109, 111
FatI CATG 3 cut(s) 9, 61, 69
Fnu4HI GCNGC 3 cut(s) 50, 53, 102
FriOI GRGCYC 1 cut(s) 147
Fsp4HI GCNGC 3 cut(s) 50, 53, 102
GluI GCNGC 3 cut(s) 50, 53, 102
Hin1II CATG 3 cut(s) 13, 65, 73
HindIII AAGCTT 1 cut(s) 149
HphI GGTGA 1 cut(s) 110
Hpy188I TCNGA 2 cut(s) 45, 98
HpyCH4V TGCA 1 cut(s) 19
HpyF10VI GCNNNNNNNGC 1 cut(s) 98
HpyF3I CTNAG 1 cut(s) 36
Hsp92II CATG 3 cut(s) 13, 65, 73
Kzo9I GATC 1 cut(s) 93
LmnI GCTCC 1 cut(s) 57
LpnPI CCDG 2 cut(s) 39, 114
Lsp1109I GCAGC 2 cut(s) 39, 61
MalI GATC 1 cut(s) 95
MboI GATC 1 cut(s) 93
MboII GAAGA 1 cut(s) 107
MhlI GDGCHC 1 cut(s) 147
MluCI AATT 1 cut(s) 155
MnlI CCTC 3 cut(s) 31, 131, 134
MseI TTAA 1 cut(s) 160
MslI CAYNNNNRTG 1 cut(s) 14
MspA1I CMGCKG 1 cut(s) 52
MwoI GCNNNNNNNGC 1 cut(s) 98
NdeII GATC 1 cut(s) 93
NlaIII CATG 3 cut(s) 13, 65, 73
NlaIV GGNNCC 1 cut(s) 59
PkrI GCNGC 3 cut(s) 51, 54, 103
Psp124BI GAGCTC 1 cut(s) 147
PspN4I GGNNCC 1 cut(s) 59
PvuII CAGCTG 1 cut(s) 52
RseI CAYNNNNRTG 1 cut(s) 14
SacI GAGCTC 1 cut(s) 147
SaqAI TTAA 1 cut(s) 160
SatI GCNGC 3 cut(s) 50, 53, 102
Sau3AI GATC 1 cut(s) 93
SduI GDGCHC 1 cut(s) 147
SetI ASST 4 cut(s) 54, 123, 147, 153
SgeI CNNG 9 cut(s) 22, 38, 43, 74, 82, 93, 110, 141, 154
SmiMI CAYNNNNRTG 1 cut(s) 14
SmlI CTYRAG 1 cut(s) 146
SmoI CTYRAG 1 cut(s) 146
Sse9I AATT 1 cut(s) 155
SsiI CCGC 2 cut(s) 55, 102
SstI GAGCTC 1 cut(s) 147
TasI AATT 1 cut(s) 155
TauI GCSGC 1 cut(s) 104
Tru1I TTAA 1 cut(s) 160
Tru9I TTAA 1 cut(s) 160
TseI GCWGC 2 cut(s) 49, 52
XapI RAATTY 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.