Prupe.8G107900_v2.0.a1

Mitochondrial import receptor subunit TOM6 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
13847280 .. 13849783
2504 bp
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UTR
Exon/CDS
Intron
Prupe.8G107900.1

Sequence Viewer

Length: 165 bp
ATGTTTCCGGGAATGTTCATGAAGAAGCCAGACAAGGCAGAGGCTCTGAAGCAGCTGCGAAGCCATGTGGCCATGTTTGGGGCTTGGGTCGTTGCGATCCGGGCCGCCCCCTACGTTCTTCACTTCCTCTGCGGTGAAAAGGATGAGCTCAAGCTTGAATTTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

55

Amino Acids

6.2

Weight (kDa)

8.93

Isoelectric Point (pI)

17.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017947)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49410
malus_domestica MD00G1073700.v1.1 MD10G1085000.v1.1 MD11G1171200.v1.1
prunus_persica Prupe.8G107900_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0262021
rosa_multiflora Rmu_sc0022110.1_g000001
rosa_roxburghii Rroxscaffold_7G00207750
rosa_rugosa Rorug05G0594900 Rorug05G0595000
rosa_wichuraiana Rw6G009810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 105, 132
AclWI GGATC 1 cut(s) 91
AcoI YGGCCR 1 cut(s) 69
AcsI RAATTY 1 cut(s) 158
AcuI CTGAAG 1 cut(s) 68
AfiI CCNNNNNNNGG 1 cut(s) 78
AgsI TTSAA 1 cut(s) 158
AluBI AGCT 3 cut(s) 55, 148, 154
AluI AGCT 3 cut(s) 55, 148, 154
Alw21I GWGCWC 1 cut(s) 150
AlwI GGATC 1 cut(s) 91
AoxI GGCC 2 cut(s) 69, 102
ApeKI GCWGC 2 cut(s) 52, 55
ApoI RAATTY 1 cut(s) 158
AspS9I GGNCC 1 cut(s) 102
AsuC2I CCSGG 2 cut(s) 9, 101
AsuHPI GGTGA 1 cut(s) 146
BalI TGGCCA 1 cut(s) 71
BanII GRGCYC 1 cut(s) 150
Bbv12I GWGCWC 1 cut(s) 150
BbvI GCAGC 2 cut(s) 42, 64
BcnI CCSGG 2 cut(s) 9, 101
BisI GCNGC 3 cut(s) 53, 56, 105
BlsI GCNGC 3 cut(s) 54, 57, 106
Bme1390I CCNGG 2 cut(s) 9, 101
BmgT120I GGNCC 1 cut(s) 102
BmrFI CCNGG 2 cut(s) 9, 101
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 2 cut(s) 9, 101
Bsc4I CCNNNNNNNGG 1 cut(s) 78
BseGI GGATG 1 cut(s) 148
BseLI CCNNNNNNNGG 1 cut(s) 78
BseXI GCAGC 2 cut(s) 42, 64
BshFI GGCC 2 cut(s) 71, 104
BsiHKAI GWGCWC 1 cut(s) 150
BsiSI CCGG 2 cut(s) 8, 100
BslI CCNNNNNNNGG 1 cut(s) 78
BsnI GGCC 2 cut(s) 71, 104
Bsp1286I GDGCHC 1 cut(s) 150
Bsp143I GATC 1 cut(s) 96
BspACI CCGC 2 cut(s) 105, 132
BspANI GGCC 2 cut(s) 71, 104
BspHI TCATGA 1 cut(s) 18
BspPI GGATC 1 cut(s) 91
BssMI GATC 1 cut(s) 96
BstF5I GGATG 1 cut(s) 148
BstKTI GATC 1 cut(s) 99
BstMBI GATC 1 cut(s) 96
BstMWI GCNNNNNNNGC 1 cut(s) 101
BstSCI CCNGG 2 cut(s) 7, 99
BstV1I GCAGC 2 cut(s) 42, 64
BsuRI GGCC 2 cut(s) 71, 104
BtsCI GGATG 1 cut(s) 148
CciI TCATGA 1 cut(s) 18
Cfr13I GGNCC 1 cut(s) 102
CviAII CATG 3 cut(s) 19, 65, 73
CviJI RGCY 9 cut(s) 28, 44, 55, 63, 71, 83, 104, 148, 154
CviKI_1 RGCY 9 cut(s) 28, 44, 55, 63, 71, 83, 104, 148, 154
DpnI GATC 1 cut(s) 98
DpnII GATC 1 cut(s) 96
EaeI YGGCCR 1 cut(s) 69
Ecl136II GAGCTC 1 cut(s) 148
Eco24I GRGCYC 1 cut(s) 150
Eco53kI GAGCTC 1 cut(s) 148
Eco57I CTGAAG 1 cut(s) 68
EcoICRI GAGCTC 1 cut(s) 148
EcoT38I GRGCYC 1 cut(s) 150
FaeI CATG 3 cut(s) 22, 68, 76
FaiI YATR 3 cut(s) 20, 66, 74
FatI CATG 3 cut(s) 18, 64, 72
Fnu4HI GCNGC 3 cut(s) 53, 56, 105
FokI GGATG 1 cut(s) 155
FriOI GRGCYC 1 cut(s) 150
Fsp4HI GCNGC 3 cut(s) 53, 56, 105
GluI GCNGC 3 cut(s) 53, 56, 105
HaeIII GGCC 2 cut(s) 71, 104
HapII CCGG 2 cut(s) 8, 100
Hin1II CATG 3 cut(s) 22, 68, 76
HindIII AAGCTT 1 cut(s) 152
HpaII CCGG 2 cut(s) 8, 100
HphI GGTGA 1 cut(s) 146
Hpy188I TCNGA 1 cut(s) 48
Hpy188III TCNNGA 1 cut(s) 19
HpyCH4IV ACGT 1 cut(s) 114
HpyF10VI GCNNNNNNNGC 1 cut(s) 101
HpySE526I ACGT 1 cut(s) 114
Hsp92II CATG 3 cut(s) 22, 68, 76
Kzo9I GATC 1 cut(s) 96
LpnPI CCDG 3 cut(s) 21, 42, 113
Lsp1109I GCAGC 2 cut(s) 42, 64
MaeII ACGT 1 cut(s) 114
MalI GATC 1 cut(s) 98
MboI GATC 1 cut(s) 96
MboII GAAGA 2 cut(s) 34, 110
MhlI GDGCHC 1 cut(s) 150
MlsI TGGCCA 1 cut(s) 71
MluCI AATT 1 cut(s) 158
MluNI TGGCCA 1 cut(s) 71
MnlI CCTC 2 cut(s) 34, 137
Mox20I TGGCCA 1 cut(s) 71
MscI TGGCCA 1 cut(s) 71
Msp20I TGGCCA 1 cut(s) 71
MspA1I CMGCKG 1 cut(s) 55
MspI CCGG 2 cut(s) 8, 100
MspR9I CCNGG 2 cut(s) 9, 101
MwoI GCNNNNNNNGC 1 cut(s) 101
NciI CCSGG 2 cut(s) 9, 101
NdeII GATC 1 cut(s) 96
NlaIII CATG 3 cut(s) 22, 68, 76
PagI TCATGA 1 cut(s) 18
PfoI TCCNGGA 1 cut(s) 7
PkrI GCNGC 3 cut(s) 54, 57, 106
Psp124BI GAGCTC 1 cut(s) 150
PspPI GGNCC 1 cut(s) 102
PvuII CAGCTG 1 cut(s) 55
SacI GAGCTC 1 cut(s) 150
SatI GCNGC 3 cut(s) 53, 56, 105
Sau3AI GATC 1 cut(s) 96
Sau96I GGNCC 1 cut(s) 102
ScrFI CCNGG 2 cut(s) 9, 101
SduI GDGCHC 1 cut(s) 150
SetI ASST 4 cut(s) 57, 117, 150, 156
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
Sse9I AATT 1 cut(s) 158
SsiI CCGC 2 cut(s) 105, 132
SstI GAGCTC 1 cut(s) 150
StyD4I CCNGG 2 cut(s) 7, 99
TaiI ACGT 1 cut(s) 117
TasI AATT 1 cut(s) 158
TauI GCSGC 1 cut(s) 107
TseI GCWGC 2 cut(s) 52, 55
TspDTI ATGAA 2 cut(s) 7, 35
XapI RAATTY 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.