MD11G1171200.v1.1

Mitochondrial import receptor subunit TOM6 homolog

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
18635345 .. 18635527
183 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1171200.v1.1.491

Sequence Viewer

Length: 183 bp
ATGTTTCCCATGTTTATGCAGAAGCCAGACAAGGCTGAGGCTCTGAAGTGGCTGCGGAGCCATGTCGCCATGTTCGGGGCTTGGGTCGTCGCGATTCGAGCCACCCCATATGTTATTCACCTCCTCTCTGGGAAAAAGATGAGCTCCAGCTTGAATTTAACGGCCATCTCGTTCTATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

61

Amino Acids

6.85

Weight (kDa)

9.87

Isoelectric Point (pI)

38.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017947)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49410
malus_domestica MD00G1073700.v1.1 MD10G1085000.v1.1 MD11G1171200.v1.1
prunus_persica Prupe.8G107900_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0262021
rosa_multiflora Rmu_sc0022110.1_g000001
rosa_roxburghii Rroxscaffold_7G00207750
rosa_rugosa Rorug05G0594900 Rorug05G0595000
rosa_wichuraiana Rw6G009810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 92
AciI CCGC 1 cut(s) 55
AcoI YGGCCR 1 cut(s) 162
AcsI RAATTY 1 cut(s) 154
AcuI CTGAAG 1 cut(s) 65
AfiI CCNNNNNNNGG 1 cut(s) 75
AgsI TTSAA 1 cut(s) 154
AluBI AGCT 2 cut(s) 144, 150
AluI AGCT 2 cut(s) 144, 150
Alw21I GWGCWC 1 cut(s) 146
AoxI GGCC 1 cut(s) 162
ApeKI GCWGC 1 cut(s) 52
ApoI RAATTY 1 cut(s) 154
AsuHPI GGTGA 1 cut(s) 110
BanII GRGCYC 1 cut(s) 146
Bbv12I GWGCWC 1 cut(s) 146
BbvCI CCTCAGC 1 cut(s) 36
BbvI GCAGC 1 cut(s) 39
BccI CCATC 1 cut(s) 173
BceAI ACGGC 1 cut(s) 177
BisI GCNGC 1 cut(s) 53
BlsI GCNGC 1 cut(s) 54
BmiI GGNNCC 1 cut(s) 59
BpmI CTGGAG 1 cut(s) 130
Bpu10I CCTNAGC 1 cut(s) 36
Bsc4I CCNNNNNNNGG 1 cut(s) 75
BseLI CCNNNNNNNGG 1 cut(s) 75
BseMII CTCAG 1 cut(s) 27
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 1 cut(s) 39
Bsh1236I CGCG 1 cut(s) 92
BshFI GGCC 1 cut(s) 164
BsiHKAI GWGCWC 1 cut(s) 146
BslI CCNNNNNNNGG 1 cut(s) 75
BsnI GGCC 1 cut(s) 164
Bsp1286I GDGCHC 1 cut(s) 146
Bsp68I TCGCGA 1 cut(s) 92
BspACI CCGC 1 cut(s) 55
BspANI GGCC 1 cut(s) 164
BspCNI CTCAG 1 cut(s) 28
BspFNI CGCG 1 cut(s) 92
BspLI GGNNCC 1 cut(s) 59
BstDEI CTNAG 1 cut(s) 36
BstFNI CGCG 1 cut(s) 92
BstMWI GCNNNNNNNGC 1 cut(s) 98
BstUI CGCG 1 cut(s) 92
BstV1I GCAGC 1 cut(s) 39
BsuRI GGCC 1 cut(s) 164
BtuMI TCGCGA 1 cut(s) 92
CviAII CATG 3 cut(s) 10, 62, 70
DdeI CTNAG 1 cut(s) 36
EaeI YGGCCR 1 cut(s) 162
Ecl136II GAGCTC 1 cut(s) 144
Eco24I GRGCYC 1 cut(s) 146
Eco53kI GAGCTC 1 cut(s) 144
Eco57I CTGAAG 1 cut(s) 65
EcoICRI GAGCTC 1 cut(s) 144
EcoT38I GRGCYC 1 cut(s) 146
FaeI CATG 3 cut(s) 13, 65, 73
FaiI YATR 7 cut(s) 11, 17, 63, 71, 109, 111, 177
FatI CATG 3 cut(s) 9, 61, 69
FauNDI CATATG 1 cut(s) 109
Fnu4HI GCNGC 1 cut(s) 53
FriOI GRGCYC 1 cut(s) 146
Fsp4HI GCNGC 1 cut(s) 53
GluI GCNGC 1 cut(s) 53
GsuI CTGGAG 1 cut(s) 130
HaeIII GGCC 1 cut(s) 164
Hin1II CATG 3 cut(s) 13, 65, 73
HinfI GANTC 1 cut(s) 94
HphI GGTGA 1 cut(s) 110
Hpy188I TCNGA 1 cut(s) 45
Hpy188III TCNNGA 1 cut(s) 91
Hpy99I CGWCG 1 cut(s) 92
HpyCH4V TGCA 1 cut(s) 19
HpyF10VI GCNNNNNNNGC 1 cut(s) 98
HpyF3I CTNAG 1 cut(s) 36
Hsp92II CATG 3 cut(s) 13, 65, 73
LmnI GCTCC 2 cut(s) 57, 149
LpnPI CCDG 3 cut(s) 39, 114, 160
Lsp1109I GCAGC 1 cut(s) 39
MhlI GDGCHC 1 cut(s) 146
MluCI AATT 1 cut(s) 154
MnlI CCTC 3 cut(s) 31, 131, 134
MseI TTAA 1 cut(s) 158
MslI CAYNNNNRTG 1 cut(s) 14
MvnI CGCG 1 cut(s) 92
MwoI GCNNNNNNNGC 1 cut(s) 98
NdeI CATATG 1 cut(s) 109
NlaIII CATG 3 cut(s) 13, 65, 73
NlaIV GGNNCC 1 cut(s) 59
NruI TCGCGA 1 cut(s) 92
PcsI WCGNNNNNNNCGW 1 cut(s) 167
PfeI GAWTC 1 cut(s) 94
PkrI GCNGC 1 cut(s) 54
Psp124BI GAGCTC 1 cut(s) 146
PspN4I GGNNCC 1 cut(s) 59
RruI TCGCGA 1 cut(s) 92
RseI CAYNNNNRTG 1 cut(s) 14
SacI GAGCTC 1 cut(s) 146
SaqAI TTAA 1 cut(s) 158
SatI GCNGC 1 cut(s) 53
SduI GDGCHC 1 cut(s) 146
SetI ASST 3 cut(s) 123, 146, 152
SmiMI CAYNNNNRTG 1 cut(s) 14
Sse9I AATT 1 cut(s) 154
SsiI CCGC 1 cut(s) 55
SstI GAGCTC 1 cut(s) 146
TaqI TCGA 1 cut(s) 97
TasI AATT 1 cut(s) 154
TfiI GAWTC 1 cut(s) 94
Tru1I TTAA 1 cut(s) 158
Tru9I TTAA 1 cut(s) 158
TseI GCWGC 1 cut(s) 52
XapI RAATTY 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.