Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0018305

Physical Location & Seq

Genomic Coordinates Forward (+)

23575263 .. 23576468

Gene Structure 1206 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G63570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 855 bp

ATGGCAAGAATCATACTCACTGCTCCTCTGTTTTACTTCTTCTTTTCCTTGTTATCTCACCAAACCATGTCCCAACCTCAACACATGCACACTTTCTGCAGCGTCGACAGCTTCACACAAACCAGCTCCTACGAAACAAACCGCAACATCCTACTCACCACTCTCAGCTTGACTTCCTCGCTCGTACACTATTTAAACGCCACAATCGGTCTCAGCCCCGACACAGTCTATGGCATGTTCCTCTGTAGAGGAGACATCAACACAACATCTTGCTCAGACTGTGTTCAAACCGCAGCAATCGAGATCGCTACAAACTGTACTCTTAACAAAAGAGCTTTCATATACTACGACGAGTGTATGGTTCGATACTCAAATGTTTCCTTCTTCTCTGAATTTGAAAGTAAACCAGTCATCGTTCGTTACTCTCTTCGTTCTGCTCCAAACTCAAACCGGTTTAACCAAACCCTATCCAATAAATTAGACCAACTGATTCCTAACGTCTCTCCGTCAACTTTGATACCGTATTTTGTGGAGGATCAAGAACGTGTGACTCAGTTAGAGGGTTCATATGATTTAGTGTCAATGATTCAGTGTAGTCCTGATCTTGATCCATCAAACTGTACCATTTGCCTCAGATTTGCGTATGCAACAGTTTCAACTTGTTGCGGTGTACCAAGTTCGGCTCTGATTTTTACTCCTAAATGTATTTTGAGATATAGAACCTTTGTTTTGCCATCACCAGCGCCGTCTCCATCGTCTCTGCCTCCTATATCTCCGACATCTTCGCCTCCTCTGTCTCTGCCGCCTCAATTGCCGCCTCCTCTTTCGCAACCACCGCCCCCGCTGAGCACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010275 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022607 GO:0031224 GO:0031225 GO:0031226 GO:0031976 GO:0031984 GO:0034357 GO:0034622 GO:0036211 GO:0042651 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046658 GO:0050896 GO:0051704 GO:0051707 GO:0055035 GO:0065003 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Stress-antifung

Protein Analysis

284

Amino Acids

31.46

Weight (kDa)

6.06

Isoelectric Point (pI)

69.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	33 - 125	7.8e-23	Salt stress response/antifungal
Stress-antifung	PF01657	149 - 240	4.6e-08	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0018305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63550 AT1G63570 AT1G63570 AT1G63570 AT1G63580 AT1G63590 AT1G63600 AT5G41280 AT5G41290 AT5G41300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	105
AciI	CCGC	7 cut(s)	142, 291, 666, 803, 815, 836, 842
AclWI	GGATC	2 cut(s)	543, 602
AcsI	RAATTY	1 cut(s)	392
AfaI	GTAC	4 cut(s)	186, 319, 622, 672
AflIII	ACRYGT	1 cut(s)	544
AgeI	ACCGGT	1 cut(s)	450
AgsI	TTSAA	3 cut(s)	287, 398, 657
AluBI	AGCT	4 cut(s)	111, 126, 168, 335
AluI	AGCT	4 cut(s)	111, 126, 168, 335
Alw21I	GWGCWC	1 cut(s)	851
Alw26I	GTCTC	6 cut(s)	215, 246, 505, 753, 762, 801
AlwI	GGATC	2 cut(s)	543, 602
ApeKI	GCWGC	2 cut(s)	99, 293
ApoI	RAATTY	1 cut(s)	392
AsiGI	ACCGGT	1 cut(s)	450
AspLEI	GCGC	1 cut(s)	745
AsuHPI	GGTGA	3 cut(s)	50, 148, 729
Bbv12I	GWGCWC	1 cut(s)	851
BbvI	GCAGC	2 cut(s)	111, 305
BccI	CCATC	3 cut(s)	619, 742, 760
BceAI	ACGGC	1 cut(s)	730
BcoDI	GTCTC	6 cut(s)	215, 246, 505, 753, 762, 801
BfmI	CTRYAG	2 cut(s)	97, 244
BfoI	RGCGCY	1 cut(s)	746
BisI	GCNGC	4 cut(s)	100, 294, 803, 815
BlpI	GCTNAGC	1 cut(s)	845
BlsI	GCNGC	4 cut(s)	101, 295, 804, 816
Bpu1102I	GCTNAGC	1 cut(s)	845
BsaBI	GATNNNNATC	1 cut(s)	606
BsaI	GGTCTC	1 cut(s)	215
BsaWI	WCCGGW	1 cut(s)	450
Bse118I	RCCGGY	1 cut(s)	450
Bse1I	ACTGG	1 cut(s)	407
Bse8I	GATNNNNATC	1 cut(s)	606
BseGI	GGATG	1 cut(s)	147
BseJI	GATNNNNATC	1 cut(s)	606
BseMII	CTCAG	6 cut(s)	178, 226, 288, 566, 646, 836
BseNI	ACTGG	1 cut(s)	407
BseRI	GAGGAG	4 cut(s)	15, 264, 780, 810
BseXI	GCAGC	2 cut(s)	111, 305
BshTI	ACCGGT	1 cut(s)	450
BsiHKAI	GWGCWC	1 cut(s)	851
BsiSI	CCGG	1 cut(s)	451
BslFI	GGGAC	1 cut(s)	55
BsmAI	GTCTC	6 cut(s)	215, 246, 505, 753, 762, 801
BsmBI	CGTCTC	3 cut(s)	505, 753, 762
BsmFI	GGGAC	1 cut(s)	55
Bso31I	GGTCTC	1 cut(s)	215
Bsp1286I	GDGCHC	1 cut(s)	851
Bsp143I	GATC	4 cut(s)	303, 535, 601, 607
Bsp1720I	GCTNAGC	1 cut(s)	845
BspACI	CCGC	7 cut(s)	142, 291, 666, 803, 815, 836, 842
BspCNI	CTCAG	6 cut(s)	177, 225, 287, 565, 645, 837
BspMAI	CTGCAG	1 cut(s)	101
BspPI	GGATC	2 cut(s)	543, 602
BspTNI	GGTCTC	1 cut(s)	215
BsrFI	RCCGGY	1 cut(s)	450
BsrI	ACTGG	1 cut(s)	407
BssAI	RCCGGY	1 cut(s)	450
BssMI	GATC	4 cut(s)	303, 535, 601, 607
Bst4CI	ACNGT	6 cut(s)	226, 281, 317, 522, 620, 652
Bst6I	CTCTTC	1 cut(s)	432
BstDEI	CTNAG	6 cut(s)	164, 212, 274, 552, 632, 845
BstF5I	GGATG	1 cut(s)	147
BstH2I	RGCGCY	1 cut(s)	746
BstHHI	GCGC	1 cut(s)	745
BstKTI	GATC	4 cut(s)	306, 538, 604, 610
BstMAI	GTCTC	6 cut(s)	215, 246, 505, 753, 762, 801
BstMBI	GATC	4 cut(s)	303, 535, 601, 607
BstMWI	GCNNNNNNNGC	3 cut(s)	108, 811, 835
BstNSI	RCATGY	2 cut(s)	88, 238
BstSFI	CTRYAG	2 cut(s)	97, 244
BstV1I	GCAGC	2 cut(s)	111, 305
BtsCI	GGATG	1 cut(s)	147
BtsI	GCAGTG	1 cut(s)	18
BtsIMutI	CAGTG	2 cut(s)	18, 596
CfoI	GCGC	1 cut(s)	745
Cfr10I	RCCGGY	1 cut(s)	450
CseI	GACGC	1 cut(s)	91
Csp6I	GTAC	4 cut(s)	185, 318, 621, 671
CspAI	ACCGGT	1 cut(s)	450
CviAII	CATG	3 cut(s)	67, 85, 235
CviJI	RGCY	6 cut(s)	111, 126, 168, 216, 335, 683
CviKI_1	RGCY	6 cut(s)	111, 126, 168, 216, 335, 683
CviQI	GTAC	4 cut(s)	185, 318, 621, 671
DdeI	CTNAG	6 cut(s)	164, 212, 274, 552, 632, 845
DpnI	GATC	4 cut(s)	305, 537, 603, 609
DpnII	GATC	4 cut(s)	303, 535, 601, 607
DraI	TTTAAA	1 cut(s)	195
Eam1104I	CTCTTC	1 cut(s)	432
EarI	CTCTTC	1 cut(s)	432
Eco31I	GGTCTC	1 cut(s)	215
Esp3I	CGTCTC	3 cut(s)	505, 753, 762
FaeI	CATG	3 cut(s)	70, 88, 238
FaqI	GGGAC	1 cut(s)	55
FatI	CATG	3 cut(s)	66, 84, 234
FauI	CCCGC	1 cut(s)	849
FauNDI	CATATG	1 cut(s)	568
FblI	GTMKAC	1 cut(s)	105
Fnu4HI	GCNGC	4 cut(s)	100, 294, 803, 815
FokI	GGATG	1 cut(s)	134
Fsp4HI	GCNGC	4 cut(s)	100, 294, 803, 815
GlaI	GCGC	1 cut(s)	744
GluI	GCNGC	4 cut(s)	100, 294, 803, 815
HaeII	RGCGCY	1 cut(s)	746
HapII	CCGG	1 cut(s)	451
HgaI	GACGC	1 cut(s)	91
HhaI	GCGC	1 cut(s)	745
Hin1II	CATG	3 cut(s)	70, 88, 238
Hin6I	GCGC	1 cut(s)	743
HinP1I	GCGC	1 cut(s)	743
HincII	GTYRAC	2 cut(s)	106, 510
HindII	GTYRAC	2 cut(s)	106, 510
HinfI	GANTC	4 cut(s)	9, 490, 550, 586
HpaII	CCGG	1 cut(s)	451
HphI	GGTGA	3 cut(s)	50, 148, 729
Hpy166II	GTNNAC	5 cut(s)	106, 187, 404, 510, 671
Hpy188I	TCNGA	5 cut(s)	277, 391, 635, 687, 777
Hpy188III	TCNNGA	4 cut(s)	301, 539, 599, 605
Hpy8I	GTNNAC	5 cut(s)	106, 187, 404, 510, 671
Hpy99I	CGWCG	2 cut(s)	107, 353
HpyAV	CCTTC	1 cut(s)	391
HpyCH4III	ACNGT	6 cut(s)	226, 281, 317, 522, 620, 652
HpyCH4IV	ACGT	2 cut(s)	498, 544
HpyCH4V	TGCA	3 cut(s)	88, 99, 647
HpyF10VI	GCNNNNNNNGC	3 cut(s)	108, 811, 835
HpyF3I	CTNAG	6 cut(s)	164, 212, 274, 552, 632, 845
HpySE526I	ACGT	2 cut(s)	498, 544
Hsp92II	CATG	3 cut(s)	70, 88, 238
HspAI	GCGC	1 cut(s)	743
Kzo9I	GATC	4 cut(s)	303, 535, 601, 607
LmnI	GCTCC	3 cut(s)	28, 131, 442
LpnPI	CCDG	5 cut(s)	136, 420, 464, 612, 753
Lsp1109I	GCAGC	2 cut(s)	111, 305
MaeII	ACGT	2 cut(s)	498, 544
MaeIII	GTNAC	2 cut(s)	419, 547
MalI	GATC	4 cut(s)	305, 537, 603, 609
MboI	GATC	4 cut(s)	303, 535, 601, 607
MboII	GAAGA	4 cut(s)	31, 376, 419, 774
MfeI	CAATTG	1 cut(s)	809
MhlI	GDGCHC	1 cut(s)	851
MluCI	AATT	3 cut(s)	392, 476, 809
MlyI	GAGTC	1 cut(s)	544
MmeI	TCCRAC	1 cut(s)	800
MseI	TTAA	4 cut(s)	194, 324, 456, 853
MspA1I	CMGCKG	1 cut(s)	844
MspI	CCGG	1 cut(s)	451
MunI	CAATTG	1 cut(s)	809
MwoI	GCNNNNNNNGC	3 cut(s)	108, 811, 835
NdeI	CATATG	1 cut(s)	568
NdeII	GATC	4 cut(s)	303, 535, 601, 607
NlaIII	CATG	3 cut(s)	70, 88, 238
NmuCI	GTSAC	1 cut(s)	547
NspI	RCATGY	2 cut(s)	88, 238
PfeI	GAWTC	3 cut(s)	9, 490, 586
PflFI	GACNNNGTC	1 cut(s)	224
PinAI	ACCGGT	1 cut(s)	450
PkrI	GCNGC	4 cut(s)	101, 295, 804, 816
PleI	GAGTC	1 cut(s)	544
PpsI	GAGTC	1 cut(s)	544
PstI	CTGCAG	1 cut(s)	101
PsyI	GACNNNGTC	1 cut(s)	224
RsaI	GTAC	4 cut(s)	186, 319, 622, 672
RsaNI	GTAC	4 cut(s)	185, 318, 621, 671
SalI	GTCGAC	1 cut(s)	104
SaqAI	TTAA	4 cut(s)	194, 324, 456, 853
SatI	GCNGC	4 cut(s)	100, 294, 803, 815
Sau3AI	GATC	4 cut(s)	303, 535, 601, 607
SchI	GAGTC	1 cut(s)	544
SduI	GDGCHC	1 cut(s)	851
SetI	ASST	8 cut(s)	79, 113, 128, 170, 337, 501, 547, 725
SfcI	CTRYAG	2 cut(s)	97, 244
Sse9I	AATT	3 cut(s)	392, 476, 809
SsiI	CCGC	7 cut(s)	142, 291, 666, 803, 815, 836, 842
TaaI	ACNGT	6 cut(s)	226, 281, 317, 522, 620, 652
TaiI	ACGT	2 cut(s)	501, 547
TaqI	TCGA	3 cut(s)	105, 300, 364
TaqII	GACCGA	1 cut(s)	197
TasI	AATT	3 cut(s)	392, 476, 809
TatI	WGTACW	1 cut(s)	317
TauI	GCSGC	2 cut(s)	805, 817
TfiI	GAWTC	3 cut(s)	9, 490, 586
Tru1I	TTAA	4 cut(s)	194, 324, 456, 853
Tru9I	TTAA	4 cut(s)	194, 324, 456, 853
TscAI	CASTG	2 cut(s)	25, 596
TseFI	GTSAC	1 cut(s)	547
TseI	GCWGC	2 cut(s)	99, 293
Tsp45I	GTSAC	1 cut(s)	547
TspDTI	ATGAA	2 cut(s)	328, 555
TspGWI	ACGGA	1 cut(s)	495
TspRI	CASTG	2 cut(s)	25, 596
Tth111I	GACNNNGTC	1 cut(s)	224
XapI	RAATTY	1 cut(s)	392
XceI	RCATGY	2 cut(s)	88, 238
XmiI	GTMKAC	1 cut(s)	105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.